BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780625|ref|YP_003065038.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] (289 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780625|ref|YP_003065038.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040302|gb|ACT57098.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] Length = 289 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 289/289 (100%), Positives = 289/289 (100%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL Sbjct: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR Sbjct: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI Sbjct: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV Sbjct: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK Sbjct: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 >gi|315121826|ref|YP_004062315.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495228|gb|ADR51827.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 295 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 220/291 (75%), Positives = 253/291 (86%), Gaps = 3/291 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNL+ VMKNM +TDI LHRKNLRFDFP +F+ RGKKI +V RRAKYL Sbjct: 4 MPELPEVEIIRRNLIPVMKNMILTDIWLHRKNLRFDFPPNFALNVRGKKITNVVRRAKYL 63 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LIELE NLSII HLGMSGSFIIE TS K IK+P+HNHVTISL+N T+KYRVIYN Sbjct: 64 LIELEDNLSIIAHLGMSGSFIIEDTSSTNSQKKIKDPRHNHVTISLSNEDKTQKYRVIYN 123 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFMDLV+TSL+ QYP L +GPEP D++FNA YLTHQF+K+NSNLKNALLNQ+IV Sbjct: 124 DPRRFGFMDLVKTSLRDQYPSLIKIGPEPTDSAFNATYLTHQFYKRNSNLKNALLNQRIV 183 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRA++SP+R +SL+Q+N TP + + +LIQEIQKV+ DAI+AGGSSLR Sbjct: 184 AGLGNIYVCEALWRARISPVRTAKSLVQDNKTPNEKISRLIQEIQKVITDAINAGGSSLR 243 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYVH DGSIG FQN+F+VYGKTG+ C SNCGQMIRRIVQ+GRSTFYCTYCQ Sbjct: 244 DYVHTDGSIGSFQNSFAVYGKTGKSCPSNCGQMIRRIVQSGRSTFYCTYCQ 294 >gi|307942717|ref|ZP_07658062.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] gi|307773513|gb|EFO32729.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] Length = 297 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + +R +LRF FP +F G K+ +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPSFEGAVIAKLDQNRPDLRFPFPENFEGRLTGHKVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L ++E +++HLGMSGSF IE + + KNP+H+HV L + Sbjct: 61 LADIETGDVLVMHLGMSGSFRIETDADELSPGAFQFERSKNPKHDHVVFHLEQKSGATA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM L+E + +P +G EP N + + F K + LK ALL Sbjct: 120 RIIYNDPRRFGFMTLIERATLGDHPLFAKMGMEPLGNDLDGQQIADLFSGKKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ L+PIR +L G D L + I+ L DAI+AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSGLNPIRAAGTLATKTGRATDKAKLLAEMIRDTLSDAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ DGS+GYFQ++F+VY + GEPC + CG I RIVQ+ RSTFYC CQ+ Sbjct: 240 GSTLRDHTKADGSLGYFQHSFAVYDREGEPCRTEGCGGTIERIVQSNRSTFYCPRCQR 297 >gi|154247235|ref|YP_001418193.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] gi|238686730|sp|A7IKJ3|FPG_XANP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154161320|gb|ABS68536.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] Length = 293 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 177/293 (60%), Gaps = 4/293 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P +F+ G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPVLQGAVIESAEARRPDLRWPLPDNFAERLAGRRVEAIGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK---KYRVIYN 117 L +L+G +I+HLGMSGS IE + H ++ V +N Sbjct: 61 LADLDGGEVMILHLGMSGSIRIEGGAVKGRPGRFHHPRGAGGPHDHVVLHLAGGATVTFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + +V +P L LGPEP N FNA YL +++++LK ALL+QK+V Sbjct: 121 DPRRFGAILIVPYDQIMSHPLLAGLGPEPLGNGFNAEYLARACARRHTSLKAALLDQKLV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL+RA LSP R ++ G P +L+ I+ VL +AI AGGSSLR Sbjct: 181 AGLGNIYVCEALFRAGLSPRRLAHTIATAEGAPTRRAERLVIAIRDVLREAIHAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G +GYFQ+ F VY + G+PC + +C IRRIVQ GRSTFYC CQ+ Sbjct: 241 DHRQVNGELGYFQHTFKVYDREGQPCQTLHCKDTIRRIVQNGRSTFYCPTCQR 293 >gi|182677448|ref|YP_001831594.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] gi|238691220|sp|B2IE81|FPG_BEII9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|182633331|gb|ACB94105.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] Length = 288 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 139/293 (47%), Positives = 181/293 (61%), Gaps = 9/293 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + T + R +LRF FP +F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMVGASFTTVEQRRADLRFPFPDNFAARLEGRRVEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L +L+ +++HLGMSGSF IE P KN H+HV L+ T R+IYN Sbjct: 61 LADLDDAQVLVMHLGMSGSFRIEKAGDLASPPPGKNAAHDHVVFGLSTGT-----RIIYN 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM L+ +P R +G EP N L F K + LK ALL+Q ++ Sbjct: 116 DPRRFGFMHLIARQDLAGHPLFRNVGIEPLGNELEGALLARLFAGKTTPLKTALLDQTLI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL RA LSP R +L G P + ++L + I+ VL +AI+AGGSSLR Sbjct: 176 AGLGNIYVCEALHRAGLSPRRAAGTLAGKKGQPTERAHRLSEIIRAVLEEAIEAGGSSLR 235 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG++GYFQ+ F VY + EPC CG I+RIVQAGRSTF+C CQ+ Sbjct: 236 DHRQADGALGYFQHRFRVYDREAEPCPREGCGGTIKRIVQAGRSTFFCAKCQR 288 >gi|158422424|ref|YP_001523716.1| formamidopyrimidine-DNA glycosylase [Azorhizobium caulinodans ORS 571] gi|172048048|sp|A8IQM5|FPG_AZOC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158329313|dbj|BAF86798.1| formamidopyrimidine-DNA glycolase [Azorhizobium caulinodans ORS 571] Length = 293 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 133/298 (44%), Positives = 177/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVRRGLLPVLQGAVIESAEARRPDLRWPLPEGFAERLTGRRVEAVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L+G +IVHLGMSGS IE + H+HV L Sbjct: 61 LADLDGGEVLIVHLGMSGSIRIEGAQVKGRPAGFYHPRGEPGTHDHVVFHLAGGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V +NDPRRFG M LV +P L +LGPEP N+F+A YL + +NLK ALL Sbjct: 117 -VTFNDPRRFGAMLLVPYDQLDSHPLLSSLGPEPLGNTFHADYLAQACAGRRTNLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK+VAG+GNIYV EAL RA LSP R +L +G P +L+ I+ VL +AI AG Sbjct: 176 DQKVVAGLGNIYVSEALHRAGLSPRRMASTLASASGAPNVRTERLVTAIRDVLREAIQAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ ++G +GYFQ+ F VY + GEPC + C ++RIVQAGRSTF+C CQ+ Sbjct: 236 GSSLKDHRQVNGELGYFQHNFKVYDREGEPCPTLRCKGHVQRIVQAGRSTFFCATCQR 293 >gi|323136854|ref|ZP_08071935.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] gi|322398171|gb|EFY00692.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] Length = 328 Score = 241 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 178/294 (60%), Gaps = 10/294 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + R +LRF FP F+ G++I+D+ RRAKYL Sbjct: 40 MPELPEVETVRRGLAPALVGARILRVEQRRGDLRFPFPPDFARRLGGRRILDLRRRAKYL 99 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 + +L+ + ++++HLGMSGSF I+ + + H+HV L N RV Y Sbjct: 100 IADLDADEALVMHLGMSGSFRIDEDAPGRFHHPRDKSAAHDHVVFHLDNGR-----RVTY 154 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM LV + R +G EP +A L + F + + +K LL+Q++ Sbjct: 155 NDPRRFGFMLLVPARELDAHNLFRGVGVEPLGEGLDAAMLANAFRGRKAPVKALLLDQRL 214 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL RA++SP+ +L+ G P L +L + I++VL DA++AGGSSL Sbjct: 215 VAGLGNIYVCEALHRARVSPLAAAGTLVTATGKPGAALARLPKAIKEVLADALEAGGSSL 274 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DGS+GYFQ++F VY + G C C + R+ Q+GRSTFYC CQK Sbjct: 275 RDHRQADGSLGYFQHSFRVYDREGAACPTPGCKGTVARVTQSGRSTFYCPRCQK 328 >gi|49475062|ref|YP_033103.1| formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] gi|81648257|sp|Q6G4T2|FPG_BARHE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49237867|emb|CAF27063.1| Formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] Length = 291 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 141/293 (48%), Positives = 191/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+R++LRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIVSVTLNRRDLRFPFPEAFSERLIGRTIMGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT----SCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + K +H+HV + + + K Y + Y Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDFLRERSSTVSKFVKHDHVVMDIQA-KDGKVYHLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV+T Y++P L+ LG EP N+F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLVDTRSLYEHPLLKKLGLEPMSNAFSGSYLQEVFVNKKISLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GGS+L Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLALKTECARELAASLAQNIRNVITEAISSGGSTL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+ DGS+GYFQ++FSVYG+ G+ CL CG I RI+Q+GRS+FYC+ CQK Sbjct: 240 RDYIRTDGSLGYFQHSFSVYGREGKECLH-CGIPIVRILQSGRSSFYCSQCQK 291 >gi|325291755|ref|YP_004277619.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] gi|325059608|gb|ADY63299.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] Length = 311 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 152/302 (50%), Positives = 194/302 (64%), Gaps = 15/302 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + L R +LRF FP F+ G+ II + RRAKYL Sbjct: 12 MPELPEVETVRRGLAPTMEGARIRKLHLGRPDLRFPFPEDFAGLIEGRTIISLGRRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA------------KPIKNPQHNHVTISLTNNTN 108 LIELE L+I+ HLGMSGSF IE + K+ +H+HV L Sbjct: 72 LIELEDGLTIVAHLGMSGSFRIEAAADEAGNRNAPGAFHYARSKDGKHDHVVFHLD--KG 129 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 ++ VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK Sbjct: 130 EERICVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFQGKSQPLK 189 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + LL+QK++AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DA Sbjct: 190 STLLDQKVIAGLGNIYVCEALWRAHLSPLRAAGTLVTKTGEPKPELINLTEKIRDVIADA 249 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYC 287 I AGGSSLRD++ DG++GYFQ++FSVY + G+PC CG + RIVQAGRSTFYC C Sbjct: 250 IAAGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERIVQAGRSTFYCAAC 309 Query: 288 QK 289 QK Sbjct: 310 QK 311 >gi|319408042|emb|CBI81696.1| Formamidopyrimidine-DNA glycosylase [Bartonella schoenbuchensis R1] Length = 291 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 142/293 (48%), Positives = 188/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+RKNLRF FP FS G++II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLTGAKIISVTLNRKNLRFPFPEEFSEKLVGRRIIELDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ H+GMSG++ IE A K H+H + + + Y +IY Sbjct: 61 LFHLSQNETILGHMGMSGTWRIEDKLFKKEYASMGKLVAHDHFIMDVRA-KDGNVYHIIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGF+ LV+T ++P L+ LG EP + + YL F K ++LK ALL+Q I Sbjct: 120 NDTRRFGFILLVDTIKLNEHPLLKKLGVEPMGDVLSGSYLQKAFINKKTSLKMALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEALWR++LSP R +L + ++ L Q I+ V+ +AI AGGSSL Sbjct: 180 IAGLGNIYVCEALWRSRLSPQRSAFTLALKSARAYELANCLAQNIRDVISEAIIAGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYVH DGS+GYFQ+ FSVYG+ G+ CL C I RI+QAGRS+FYC CQK Sbjct: 240 RDYVHTDGSLGYFQHNFSVYGREGKECL-QCEVPIVRILQAGRSSFYCPKCQK 291 >gi|13474651|ref|NP_106220.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] gi|17375857|sp|Q98BG6|FPG_RHILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14025406|dbj|BAB52006.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] Length = 296 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 133/296 (44%), Positives = 179/296 (60%), Gaps = 9/296 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + R +LRF FP FS GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARLTRVEARRPDLRFPFPERFSERLTGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-------TNTKKYR 113 + ++ +I HLGMSGSF IE + H + ++ + + R Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIETDDDGETPGVFHHERSKSTAHDHVVFDVVAADGARSR 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 VI+NDPRRFGFM E +P L LG EP N+ + + L + S LK ALL+ Sbjct: 121 VIFNDPRRFGFMLFAE-GSPETHPMLAGLGVEPTGNTLDGVLLASLLKGRGSPLKAALLD 179 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QK++AG+GNIYV EALWRA LSP+R+ ++ + + + +L + I+ V+ DAI AGG Sbjct: 180 QKLIAGLGNIYVSEALWRAGLSPLREAGTIARPSKKARQQSERLAEAIRSVISDAIAAGG 239 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 SSLRDY+H DGS+GYFQ++F+VY + GEPC CG I R+VQ+GRSTFYC CQ Sbjct: 240 SSLRDYMHTDGSLGYFQHSFAVYDREGEPCPKPGCGGHIERVVQSGRSTFYCRTCQ 295 >gi|192288520|ref|YP_001989125.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] gi|238692562|sp|B3Q620|FPG_RHOPT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192282269|gb|ACE98649.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] Length = 291 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 132/297 (44%), Positives = 177/297 (59%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F+A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + G+PC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGKPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|300025047|ref|YP_003757658.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] gi|299526868|gb|ADJ25337.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] Length = 293 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 132/298 (44%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L R NLRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVVTGRRIAAVELRRPNLRFPFPERFAERLVGQRIDRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK--------NPQHNHVTISLTNNTNTKKY 112 + EL G +++HLGM+G F I +P H+HV LT Sbjct: 61 IAELSGGEDLVMHLGMTGRFTILEKGRTDTPGEYVNSVGADPVHDHVVFKLTGGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM ++ + + ++P R LG EP + A YL + K +NLK L+ Sbjct: 116 RIVYNDPRRFGFMVMMPHAERSEHPLFRALGVEPLGSELTADYLAARARGKKANLKAFLM 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYV EAL+R+ LSP R R+L G P + KL+ I++VL AIDA Sbjct: 176 DQRIVAGLGNIYVAEALFRSGLSPNRVARALADRRGAPTERAEKLVPAIREVLEQAIDAR 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY G+ G FQN+F+VY + G PC CG IRR+V AGR++FYC CQ+ Sbjct: 236 GSTLRDYRDASGASGGFQNSFAVYDRAGRPCPRAGCGGEIRRVVHAGRASFYCPRCQR 293 >gi|319403662|emb|CBI77247.1| Formamidopyrimidine-DNA glycosylase [Bartonella rochalimae ATCC BAA-1498] Length = 291 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 146/293 (49%), Positives = 189/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + K +H+H I++ + K YR+ Y Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINIRA-KDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLESTNFLAQNICNVITEAIASGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 240 RDYMHADSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|319406580|emb|CBI80222.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. 1-1C] Length = 291 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 146/293 (49%), Positives = 189/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + K +H+H I++ + K YR+ Y Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINIQA-KDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + L Q I V+ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLKSTNFLAQNICNVITEAIASGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H+D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 240 RDYMHVDSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|227824215|ref|YP_002828188.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] gi|254789447|sp|C3MCY7|FPG_RHISN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227343217|gb|ACP27435.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] Length = 296 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 145/298 (48%), Positives = 190/298 (63%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L ++ + L R +LRF FP +F+AA G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPAIEGALLVRAELRRPDLRFPFPENFAAAVSGRRILALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 +I+LEG I+ HLGMSGSF IE + K+ +H+HV L + Sbjct: 61 MIDLEGGDVIVAHLGMSGSFRIEAGAQPAAPGEFHHPRGKDEKHDHVIFHLDGGSGQM-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMDL ++ R LG EP N+ +A YL + K+ LK ALL Sbjct: 119 RVIYNDPRRFGFMDLARRDTIAEHAYFRDLGEEPTGNALDAAYLAARLAGKSQPLKTALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L++ I+ V+ DAI AG Sbjct: 179 DQRTIAGLGNIYVCEALWRSGLSPNRAAGTLVDKRGRPKQALLALVEAIRAVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D++ DGS+GYFQ+AFSVY + GE C C + RIVQAGRSTF+C CQK Sbjct: 239 GSSLKDHIQADGSLGYFQHAFSVYDRAGEACRKPGCDGTVTRIVQAGRSTFHCPRCQK 296 >gi|319405133|emb|CBI78739.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. AR 15-3] Length = 291 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 142/293 (48%), Positives = 187/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L ++ + + L+ KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETIRRGLDPLLTGAKIISVKLNHKNLRFPFPEAFSERLVGRTIIRLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSG + IE + K H+H I + + K YR+ Y Sbjct: 61 LFYLSHNETILSHLGMSGLWRIEDEFLRKEHSSIDKLVAHDHCIIKVQA-KDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGF+ L +T+ Y++P L+ LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFILLTDTAKLYEHPLLKRLGVEPTENTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I ++ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRSAFTLALEDVYMLESANFLAQNICNLITEAIISGGASL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H DGS GYFQ+ FSVYG+ G+ CL NC + I RI+Q+GRS+FYC CQK Sbjct: 240 RDYMHADGSFGYFQHYFSVYGREGKECL-NCKEPIVRILQSGRSSFYCPQCQK 291 >gi|319898369|ref|YP_004158462.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] gi|319402333|emb|CBI75872.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] Length = 291 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 144/293 (49%), Positives = 186/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L + + + L+RKNLRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETIRRGLNPFLTGAKIISVKLNRKNLRFPFPEAFSERLVGRTIVKLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE----HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + K H+H I++ + + YR+ Y Sbjct: 61 LFYLSRNETILSHLGMSGSWRIEGEFLKKEHSSVSKLVAHDHCIINVQA-KDDRIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T Y++P L+ LG EP N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTRKLYEHPLLKRLGVEPMKNTLSGAYLKKAFVNKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI AGG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRSAFTLALEDLCMLESANFLAQNICDVITEAIVAGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H DGS+GYFQ+ FSVYG+ G+ CL NC I RI+Q+GRS+FYC CQK Sbjct: 240 RDYMHADGSLGYFQHYFSVYGREGKECL-NCEIPIVRILQSGRSSFYCPQCQK 291 >gi|209551935|ref|YP_002283852.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238066646|sp|B5ZYK9|FPG_RHILW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209537691|gb|ACI57626.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 301 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 190/303 (62%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVAKLELRRGDLRFPFPDAFADRVSGRTIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------------PIKNPQHNHVTISLTNNT 107 L++L+ ++I HLGMSGSF IE + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGRIEEGAGAATPGEFHHARSKDEKHDHVVFHLESPA 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K L Sbjct: 121 GPR--RVVYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRHKAQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K+ALL+QK +AG+GNIYVCEALWRA LSPIR +L G PK+ L L+ I+ V+ D Sbjct: 179 KSALLDQKNIAGLGNIYVCEALWRAHLSPIRAAGTLATAGGRPKEQLNLLVASIRDVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC Sbjct: 239 AITAGGSSLRDHIQTDGSLGYFQHSFSVYDREGQACRTPGCGGTVARIVQAGRSTFYCAT 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|39933164|ref|NP_945440.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] gi|81564483|sp|Q6NDM1|FPG_RHOPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39652789|emb|CAE25528.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] Length = 291 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 176/297 (59%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVEADGETRPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKDEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|240849911|ref|YP_002971300.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] gi|240267034|gb|ACS50622.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] Length = 291 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 192/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+ II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVVTDAKIVSVRLNRRDLRFPFPEAFSERLIGRTIIELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE+ T + K +H+H + + Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTVFSTTSKLIKHDHFVMDIQTRDGEV-YHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV T Y++P L LG EP NSF+ YL F K +LK+ LL+Q I Sbjct: 120 NDVRRFGFMLLVNTDKLYEHPLLNKLGLEPMSNSFSGRYLQKAFVNKKMSLKSVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L + L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTARACEFADSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+HIDGS+GYFQ+AFSVYG+ G+ CL CG I RI+QAGRS+FYC+ CQK Sbjct: 240 RDYMHIDGSLGYFQHAFSVYGREGKQCLE-CGTPIVRILQAGRSSFYCSQCQK 291 >gi|316931481|ref|YP_004106463.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] gi|315599195|gb|ADU41730.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 180/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + ++ H+HV +T+ Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIEADGETTPGEFHYQRSEDRTHDHVVFEMTSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RIVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDANLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA+LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRARLSPKRKAATLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC +CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPC-PSCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|254460471|ref|ZP_05073887.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2083] gi|206677060|gb|EDZ41547.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium HTCC2083] Length = 283 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 129/294 (43%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM++ + ++R NLR+ FP S G KI + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMESTRIAKADVNRPNLRWPFPDQMSERLTGAKIERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ S+++HLGMSG +I + + H+HV + N RV + Sbjct: 61 LADLDTGESLLIHLGMSGRMLISGAKIGQFTHDHPPAEKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N+F+ YL K S +K ALL+Q + Sbjct: 116 NDPRRFGAMDLLDTKTADSHKLLSSIGPEPLGNNFDEAYLIEVLKTKGSPIKTALLDQSV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA ++P RK + K + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAHIAPSRKANKIS------KPRVASLVPIIRQVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F VYG+ GEPC + CG I+RIVQ+GRS+FYC CQ+ Sbjct: 230 KDFRQASGDLGYFQHSFDVYGREGEPCKTVDCGNTIKRIVQSGRSSFYCPSCQR 283 >gi|159184256|ref|NP_353352.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] gi|22001592|sp|Q8UIH4|FPG_AGRT5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159139583|gb|AAK86137.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] Length = 298 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 154/300 (51%), Positives = 193/300 (64%), Gaps = 13/300 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ V + L R +LRF FP F+ GK II + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 LIELE L+I+ HLGMSGSF IE K+ +H+HV L + Sbjct: 61 LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLD--KGEE 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK+ Sbjct: 119 RVCVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKST 178 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QKI+AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DAI Sbjct: 179 LLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIA 238 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD++ DG++GYFQ++FSVY + G+PC CG + R+VQAGRSTFYC CQK Sbjct: 239 AGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298 >gi|121602138|ref|YP_989473.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] gi|166215609|sp|A1UU20|FPG_BARBK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120614315|gb|ABM44916.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] Length = 291 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 153/293 (52%), Positives = 191/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLMGSRIISVSLGCKNLRFPFPESFSERLTGRIIIKLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ +E + K H+H +S TN K YR+IY Sbjct: 61 LFHLSQNETIVSHLGMSGSWRVEDDLLRKKHSYMGKLVAHDHFIMSFQA-TNGKIYRLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T Y++P LR LG EP DN+ + YL F K ++LK ALL+Q I Sbjct: 120 NDSRRFGFMLLADTMRLYEHPLLRNLGLEPIDNAVSGAYLQKAFINKKTSLKAALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R+ +L + ++ L Q I V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSYLSPERRALTLASKSAHACELAKCLAQNICDVISEAIFSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYVHIDGS+GYFQ+ FSVYG+ G+ C S CG I RIVQ+GRS+FYC CQK Sbjct: 240 RDYVHIDGSLGYFQHCFSVYGREGKEC-SRCGMHIVRIVQSGRSSFYCPQCQK 291 >gi|49473899|ref|YP_031941.1| formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] gi|81647239|sp|Q6G0L3|FPG_BARQU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49239402|emb|CAF25740.1| Formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] Length = 291 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 135/292 (46%), Positives = 180/292 (61%), Gaps = 4/292 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + I L+R++LRF FP FS G+ I+++ RR KYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIISITLNRRDLRFPFPEAFSERLVGRTIMELGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L L N +I+ HLGMSGS+ IE K + + K Y + YN Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDLLRKTYSAAGKFVKHDHFLMDIQAKDGKVYHLTYN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D RRFGFM L++T+ Y++P L+ LG EP N F+ YL F K +LK LL+Q I+ Sbjct: 121 DVRRFGFMLLLDTNRIYEHPLLKKLGLEPLSNEFSGRYLQEAFVNKKISLKGVLLDQSII 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWR++LSP R +L ++ L Q I+ V+ +AI GGS+LR Sbjct: 181 AGLGNIYVCEALWRSRLSPQRGAFTLALKTVCAREFADSLAQNIRNVIAEAISFGGSTLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY+ DGS+GYFQ++FSVYG+ G+ C CG I RI Q+GRS+FYC+ CQK Sbjct: 241 DYIRTDGSLGYFQHSFSVYGREGKECF-QCGIPITRISQSGRSSFYCSQCQK 291 >gi|254718221|ref|ZP_05180032.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|265983178|ref|ZP_06095913.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306839961|ref|ZP_07472755.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] gi|264661770|gb|EEZ32031.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306404925|gb|EFM61210.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] Length = 293 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKGLGVEPTGNLLSGEVLAALFTGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCTNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|254700815|ref|ZP_05162643.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|254709159|ref|ZP_05170970.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|256030683|ref|ZP_05444297.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|256060142|ref|ZP_05450324.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|256158684|ref|ZP_05456567.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|256254088|ref|ZP_05459624.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|256370578|ref|YP_003108089.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|261221229|ref|ZP_05935510.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261316657|ref|ZP_05955854.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261324120|ref|ZP_05963317.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261751322|ref|ZP_05995031.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|265987729|ref|ZP_06100286.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|265997190|ref|ZP_06109747.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|294851408|ref|ZP_06792081.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] gi|256000741|gb|ACU49140.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|260919813|gb|EEX86466.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261295880|gb|EEX99376.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261300100|gb|EEY03597.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261741075|gb|EEY29001.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|262551658|gb|EEZ07648.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|264659926|gb|EEZ30187.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|294819997|gb|EFG36996.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] Length = 293 Score = 236 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|23503030|ref|NP_699157.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161620091|ref|YP_001593978.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|254705182|ref|ZP_05167010.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|260567351|ref|ZP_05837821.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261755887|ref|ZP_05999596.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|29611718|sp|Q8FXR6|FPG_BRUSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044584|sp|A9MAB2|FPG_BRUC2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23349072|gb|AAN31072.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161336902|gb|ABX63207.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|260156869|gb|EEW91949.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261745640|gb|EEY33566.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] Length = 293 Score = 236 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRKPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|190890023|ref|YP_001976565.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 652] gi|238692544|sp|B3PZ93|FPG_RHIE6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190695302|gb|ACE89387.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CIAT 652] Length = 296 Score = 236 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 145/298 (48%), Positives = 191/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEEGAASAMPGEFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|148559153|ref|YP_001259977.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] gi|166215613|sp|A5VTD0|FPG_BRUO2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148370410|gb|ABQ60389.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] Length = 293 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L ++ Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHL-MRSDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|27375873|ref|NP_767402.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] gi|39931278|sp|Q89WC9|FPG_BRAJA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27349011|dbj|BAC46027.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 128/298 (42%), Positives = 173/298 (58%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F A +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVVAEARRPDLRFPFQPDFVARLQGQVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + +L +++HLGMSGSF + K+ H+HV +++ + Sbjct: 61 MADLASGDVLLMHLGMSGSFRVIKPDNDAAPGEFHYPRGKDTTHDHVLFRMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFG+M ++ + P LR LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGYMKVIARNALEDEPLLRGLGPEPLGNEFDAAMLARSCEGKATSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL R+ LSP R +L G P D +L+ I VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALHRSHLSPRRIAATLATRKGEPTDHAKRLVGAIHTVLNDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GE C CG I+R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTTGELGYFQHSFKVYDREGETCKTPACGGTIKRFTQNGRSTFWCPKCQK 293 >gi|254713417|ref|ZP_05175228.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|254716226|ref|ZP_05178037.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261218000|ref|ZP_05932281.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261321150|ref|ZP_05960347.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|260923089|gb|EEX89657.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261293840|gb|EEX97336.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] Length = 293 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 139/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E +YP L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEYPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|149203140|ref|ZP_01880111.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] gi|149143686|gb|EDM31722.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] Length = 283 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + +A G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPVMEGQVIASASVNRPDLRWPFPPNMAARLTGQTVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG ++ + +H+HV + N R+ + Sbjct: 61 LADLTSGESLLIHLGMSGRMLVSGDPLGRFVHDHPAPEKHDHVVFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N+F+ YL +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLPTATAETHPLLARIGPEPLGNAFSEPYLVAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA+LSP+++ +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARLSPLQRAGALSGKR------AAALVPIIRDVLSDAISAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC C I R+VQAGRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRSPGCNGHIARVVQAGRSSFYCPLCQR 283 >gi|163867542|ref|YP_001608741.1| formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] gi|189044583|sp|A9IN26|FPG_BART1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161017188|emb|CAK00746.1| Formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] Length = 291 Score = 235 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 144/293 (49%), Positives = 196/293 (66%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+KI+++ RRAKYL Sbjct: 1 MPELPEVETVRRGLESVVTDAKIVSVQLNRRDLRFPFPEAFSERLIGRKILELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE+ T+ + K +H+H + + N Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTAFSMTSKLVKHDHFIMDIQ-TRNGDVYHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV+T Y++P L LG EP + F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLVDTDKLYKHPLLNKLGLEPMSHGFSGRYLQKAFVNKKVSLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTVYARELANSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H+DGS+GYFQ+AFSVYG+ G+ CL CG I RI+Q+GRS+FYC+ CQK Sbjct: 240 RDYMHVDGSLGYFQHAFSVYGREGKECL-QCGTPIIRILQSGRSSFYCSQCQK 291 >gi|306842707|ref|ZP_07475350.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] gi|306287153|gb|EFM58655.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] Length = 293 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 136/298 (45%), Positives = 183/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C+ CG + R VQ+GRSTF+C CQ+ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQR 293 >gi|110636424|ref|YP_676632.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium sp. BNC1] gi|123161465|sp|Q11AV8|FPG_MESSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110287408|gb|ABG65467.1| DNA-(apurinic or apyrimidinic site) lyase [Chelativorans sp. BNC1] Length = 297 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 179/298 (60%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS +G +I + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMEGARIIHVEQRRADLRFPFPAGFSEHVKGCRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L+ LE ++ HLGMSGSF IE + K K +H+HV L + Sbjct: 61 LLHLENGRVLVSHLGMSGSFRIEESGSDKLRGDFHYARSKAEKHDHVVFHLARHEGGSA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFM L++++ +P LG EP N+ + L K + LK AL+ Sbjct: 120 RVIYNDPRRFGFMLLLDSADLEAHPLFAGLGVEPTGNALDGALLARLLAGKRAPLKAALM 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP R ++ G +L I+ V+ +AI AG Sbjct: 180 DQRLVAGLGNIYVCEALWRAGLSPRRIAATIATREGKSTGRSERLAGAIRTVIAEAIAAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DYV DGS+GYFQ++FSVY + G+PC C I+R VQ GRSTFYC CQ+ Sbjct: 240 GSSLKDYVQADGSLGYFQHSFSVYDREGKPCRKEGCSGTIQRFVQGGRSTFYCPICQR 297 >gi|225626549|ref|ZP_03784588.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|260169587|ref|ZP_05756398.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|261759114|ref|ZP_06002823.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|225618206|gb|EEH15249.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|261739098|gb|EEY27094.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] Length = 293 Score = 234 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPGLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|254474974|ref|ZP_05088360.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] gi|214029217|gb|EEB70052.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] Length = 283 Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ +T ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVITKATVNRPDLRWPFPDRMAERLSGRRVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG + + + + H+HV + N RV + Sbjct: 61 LADLDSGETLLIHLGMSGRMTVSGDPLGQFVHDHPQAQKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATAEQHKLLAVLGPEPLGNGFHDDHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQIAAPR------VASLVPIIKDVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C I R+ Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRREGCDGTIARVTQSGRSSFYCAKCQR 283 >gi|225075626|ref|ZP_03718825.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] gi|224953048|gb|EEG34257.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] Length = 276 Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I + + +H+H+ + T + Y+DPR Sbjct: 62 II-TFETGILLIHLGMSGSLRIFTANDERIATPDKHDHLDFVFDDGT-----VLRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 116 KFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 175 GNIYANESLFKAGISPLRPANKLTKKE------CALLVETVKAVLQRAIETGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 229 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|114705026|ref|ZP_01437934.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] gi|114539811|gb|EAU42931.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] Length = 297 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 182/297 (61%), Gaps = 8/297 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TVT + L R +LRF P+ F+ G I +SRRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVTKLHLARPDLRFPLPYRFAERIEGAVIASLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-------TNTKKYR 113 + E L++ +HLGMSGSF IE A H L ++ + Sbjct: 61 IAETTEGLTLAMHLGMSGSFRIETKGEAIVPGTFVHPRSEDRLHDHVRFDLKRDDGSTPS 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V++NDPRRFG+M L+E + +P LR+LG EP N L F +++ LK ALL+ Sbjct: 121 VVFNDPRRFGYMTLIEPGQMHAHPHLRSLGLEPTGNGLTGEALAPLFADRSTPLKAALLD 180 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QK +AG+GNIYVCEALWRA+LSP R S+++ +G P L L I+ + DAI+AGG Sbjct: 181 QKAIAGLGNIYVCEALWRARLSPRRLAGSIVRKDGRPTARLDDLADRIRDTIADAIEAGG 240 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 S+LRDY DG +GYFQ++F VYG+ EPCL C I+RIVQ+GRSTF+C CQ+ Sbjct: 241 STLRDYRKADGELGYFQHSFRVYGREHEPCLREACRGTIKRIVQSGRSTFFCPECQR 297 >gi|15964118|ref|NP_384471.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|307301263|ref|ZP_07581025.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] gi|307317934|ref|ZP_07597371.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|7404366|sp|Q59752|FPG_RHIME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15073294|emb|CAC41802.1| Probable formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|306896336|gb|EFN27085.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|306903719|gb|EFN34306.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] Length = 301 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 189/303 (62%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F+ A G++II +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFANAVAGRRIIALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-------------KPIKNPQHNHVTISLTNNT 107 +IELEG II HLGMSGSF IE K+ +H+HV L + Sbjct: 61 MIELEGGDVIIAHLGMSGSFRIEKGPIEAGADPATPGAFHHPRGKDEKHDHVVFHLDGGS 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 RVIYNDPRRFGFMDL S + LR LG EP N+ +A YL +F K L Sbjct: 121 G--PARVIYNDPRRFGFMDLARRSALADHVFLRGLGEEPTGNALDAAYLATRFAGKIQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L + I+ V+ D Sbjct: 179 KAALLDQRTIAGLGNIYVCEALWRSGLSPKRSAGTLVDKRGRPKQALIALTERIRAVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSL+D++ DGS+GYFQ++FSVY + GE C C + RIVQAGRSTFYC + Sbjct: 239 AIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFYCPH 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|260574420|ref|ZP_05842424.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] gi|259023316|gb|EEW26608.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] Length = 283 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM T+ ++R +LR+ FP + +A G +++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLEPVMAGQTIVAAQVNRPDLRWPFPPNMAARLTGARVLGLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG ++ + +H+HV + + + RV + Sbjct: 61 LADLSSGETLLIHLGMSGRMLVSGAMLGQFHHAHPAPAKHDHVVLDMESGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T +P L +LGPEP N+F+ L +N+ +K+ALL+Q + Sbjct: 116 NDARRFGAMDLMATDGAESHPLLASLGPEPLGNAFDESVLAAALKNRNTPIKSALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA+L+P K SL L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARLNPAAKAGSLTPEQT------ASLVPIIRQVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G+PC C I R+VQ+GRS+FYC CQ+ Sbjct: 230 RDYRQTDGELGYFQHRFHVYDREGQPCATPGCPGHIERMVQSGRSSFYCPVCQR 283 >gi|255263904|ref|ZP_05343246.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] gi|255106239|gb|EET48913.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] Length = 283 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + R +LR+ FP + + GK I + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPAMEGRRIFRADVRRPDLRWPFPKNMADRLTGKTIERLRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC----AKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++I+HLGMSG +I ++ +H+HV + RV + Sbjct: 61 LADLSSGETLIIHLGMSGRMLISGDQLGVFHSEHPAPEKHDHVVFDMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL ET+ + ++ +GPEP N F+A YL + KNS +K+ LL+Q+I Sbjct: 116 NDARRFGAMDLAETATLEDHWLIKPIGPEPLGNQFDAAYLVDRLKTKNSPIKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK L + + L+ I+ VL +AIDAGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGIHPARKAAKLSKAR------IESLVPIIRDVLSEAIDAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ+ F VY + G PC + CG I+RIVQ+GRS+FYC CQ+ Sbjct: 230 KDYRQADGELGYFQHTFRVYDQEGNPCSAVGCGSTIKRIVQSGRSSFYCPTCQR 283 >gi|126724501|ref|ZP_01740344.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] gi|126705665|gb|EBA04755.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] Length = 284 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ M T+T ++R +LR+ FP + + G+K++ +SRR+KY+ Sbjct: 2 MPELPEVETVRQGLLGAMDGATITKAEVNRPDLRWPFPENMAQRITGQKVLGLSRRSKYI 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ L ++I+HLGMSG + + +H+HV + N +V + Sbjct: 62 LVSLASGETLIIHLGMSGRMTVSGDPLGQFHHEHPAPQKHDHVVFHMDNGA-----QVTF 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL + + + +GPEP N FNA YL + + +K ALL+Q+I Sbjct: 117 NDPRRFGAMDLATSDDIENHWLISKIGPEPLGNEFNAPYLVERLKTRAMPIKTALLDQQI 176 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA +SP RK + + + L+ I+ VL +AI +GGSSL Sbjct: 177 VAGLGNIYVCEVLFRAGVSPQRKAKDISAK------KIGALVPIIRDVLSEAIVSGGSSL 230 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ+ F VY + GE CL++ CG I RIVQ+GRS+F+C CQ+ Sbjct: 231 KDYRQADGELGYFQHRFKVYDREGETCLNDGCGTEISRIVQSGRSSFFCKKCQR 284 >gi|299133357|ref|ZP_07026552.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] gi|298593494|gb|EFI53694.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] Length = 293 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F+A G I + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRGDLRFPLQKDFAARLAGHVITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L+ +++HLGMSGSF + K +N H+HV + N Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVMQGDNGKIPAVFHHPRSENRTHDHVVFEMGNGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + +NDPRRFG+M +V + P LR LGPEP N+F+A L K ++LK ALL Sbjct: 116 VISFNDPRRFGYMKIVPRADLEGEPFLRALGPEPLGNAFDAAMLAQACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R+ +L +G P D +L+ I+ VL AI+AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRQASTLATKSGAPTDHAVRLVAAIRAVLNAAIEAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTRGCRGTVKRFTQNGRSTFWCPSCQK 293 >gi|217979158|ref|YP_002363305.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] gi|254789444|sp|B8EKR5|FPG_METSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|217504534|gb|ACK51943.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] Length = 292 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 135/297 (45%), Positives = 182/297 (61%), Gaps = 13/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R +LRF FP F G++I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMVGARILSVDQRRPDLRFPFPDRFPERLAGRRILALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------PIKNPQHNHVTISLTNNTNTKKYR 113 L +L+ +I+HLGMSGSF +E AK P KN H+HV +LT+ R Sbjct: 61 LADLDDGDVLIMHLGMSGSFRVEQAGPAKTLSPRGAPPKNAAHDHVVFTLTSG-----GR 115 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 ++YNDPRRFGFM + + +P R+LG EP N + L F K ++LK ALL+ Sbjct: 116 IVYNDPRRFGFMQIAARADLAAHPLFRSLGVEPLGNELSGAALARLFAGKTTSLKAALLD 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIYVCEAL RA LSP+R+ SL + +G P + +L I++VL +A+ AGG Sbjct: 176 QSLVAGLGNIYVCEALHRAGLSPLRQAGSLTKKSGRPTERANRLADTIREVLEEAVAAGG 235 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ +G++GYFQ+ F VY + PC C I RI Q GRS+F+C+ CQK Sbjct: 236 SSLRDHRQTNGALGYFQHNFRVYDRALHPCPTPGCKGEISRITQGGRSSFFCSMCQK 292 >gi|254503738|ref|ZP_05115889.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] gi|222439809|gb|EEE46488.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] Length = 297 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 136/298 (45%), Positives = 186/298 (62%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + +R +LRF FP F G+ + +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLTKVDQNRPDLRFPFPDDFVERLTGRSVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +++ +I+HLGMSGSF IE+ + K+P+H+HV L+ + Sbjct: 61 LADIDSGDVLIMHLGMSGSFRIENAIDKSTPGEFAHERNKDPKHDHVVFHLSLPNDGSA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFMDLV + +P R LG EP N+ + L F + S LK ALL Sbjct: 120 RIIYNDPRRFGFMDLVPRTDLSAHPYFRELGLEPLGNALSGEVLARLFAGRKSPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCE+LWR+ LSP R +L+ +G P L Q ++ L DAI AG Sbjct: 180 NQKLIAGLGNIYVCESLWRSGLSPKRLASTLVTKSGKPTKKADLLAQNVRLTLEDAILAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ DG++GYFQ++F+VY + G PC NC +RR+VQ+ RSTFYC CQ+ Sbjct: 240 GSSLRDHTQADGTLGYFQHSFAVYDREGAPCRTPNCTGTVRRVVQSNRSTFYCPICQR 297 >gi|116250141|ref|YP_765979.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|166198738|sp|Q1MMD9|FPG_RHIL3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115254789|emb|CAK05863.1| putative formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 296 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 192/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASGVPGEFHHARSKDEKHDHVVFHLQAASGLR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N +A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVGRADLATHPFFRDLGPEPTGNELSAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTAGGRPKAQLDLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + + C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|17988229|ref|NP_540863.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62291019|ref|YP_222812.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82700930|ref|YP_415504.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis biovar Abortus 2308] gi|189025233|ref|YP_001936001.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225853608|ref|YP_002733841.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237816522|ref|ZP_04595515.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|254690315|ref|ZP_05153569.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 6 str. 870] gi|254694803|ref|ZP_05156631.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 3 str. Tulya] gi|254696432|ref|ZP_05158260.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59] gi|254731344|ref|ZP_05189922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 4 str. 292] gi|256045787|ref|ZP_05448665.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|256112507|ref|ZP_05453428.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|256258568|ref|ZP_05464104.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|256264948|ref|ZP_05467480.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|260546283|ref|ZP_05822023.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260563081|ref|ZP_05833567.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260755854|ref|ZP_05868202.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260759077|ref|ZP_05871425.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260760803|ref|ZP_05873146.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260884879|ref|ZP_05896493.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|261215129|ref|ZP_05929410.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|265992203|ref|ZP_06104760.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|265993943|ref|ZP_06106500.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|297247406|ref|ZP_06931124.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|22001593|sp|Q8YED2|FPG_BRUME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75496004|sp|Q57A83|FPG_BRUAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101296|sp|Q2YQP8|FPG_BRUA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691494|sp|B2S9T2|FPG_BRUA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789430|sp|C0RG65|FPG_BRUMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17983995|gb|AAL53127.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62197151|gb|AAX75451.1| MutM, formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82617031|emb|CAJ12140.1| Formamidopyrimidine-DNA glycolase:Formamidopyrimidine-DNA glycolase, zinc binding domain:Sugar transporter superfamily [Brucella melitensis biovar Abortus 2308] gi|189020805|gb|ACD73527.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225641973|gb|ACO01887.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237788589|gb|EEP62804.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|260096390|gb|EEW80266.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260153097|gb|EEW88189.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260669395|gb|EEX56335.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260671235|gb|EEX58056.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260675962|gb|EEX62783.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260874407|gb|EEX81476.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|260916736|gb|EEX83597.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|262764924|gb|EEZ10845.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|263003269|gb|EEZ15562.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|263095432|gb|EEZ19033.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|297174575|gb|EFH33922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|326410182|gb|ADZ67247.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M28] gi|326539900|gb|ADZ88115.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M5-90] Length = 293 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 137/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRPGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|319785617|ref|YP_004145093.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171505|gb|ADV15043.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 186/298 (62%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +V++ T+ + R +LRF FP F+ GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQLVLEGATIARVEARRPDLRFPFPEKFAQRLAGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 ++LEG ++I HLGMSGSF IE + K+ H+HV + + T + Sbjct: 61 TMDLEGGPALICHLGMSGSFRIETADGSDMPGIFRHDRSKSSNHDHVVFHVVSPAGT-RS 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM E L +P L LG EP N+ + L+ + S LK ALL Sbjct: 120 RVIFNDPRRFGFMLFAE-GLPDVHPMLAGLGVEPTGNTLDGALLSSLMKGRRSPLKAALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYV EALWRA LSP+R+ ++ + + L Q I+ V+ DAI AG Sbjct: 179 DQRLIAGLGNIYVSEALWRAGLSPLREAGTIARPGKKAQAQSEHLAQAIRSVISDAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRDY+ DGS+GYFQ+AF+VY + GE C +CG I R+VQ+GRSTFYC CQ+ Sbjct: 239 GSSLRDYMQTDGSLGYFQHAFAVYDREGEACSKPSCGGHIERVVQSGRSTFYCRTCQR 296 >gi|148251702|ref|YP_001236287.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. BTAi1] gi|166215611|sp|A5E887|FPG_BRASB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146403875|gb|ABQ32381.1| DNA-(apurinic or apyrimidinic site) lyase [Bradyrhizobium sp. BTAi1] Length = 293 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 128/298 (42%), Positives = 181/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F+ +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVAAEARRGDLRFPFQPDFAKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + K+ H+HV +++ + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIKQDDEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ + P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIEREPHLKDLGPEPLGNEFDAAMLATACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHARRLVEAIHAVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC ++ CG +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTDGCGGVVKRFVQNGRSTFWCPKCQR 293 >gi|92115680|ref|YP_575409.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91798574|gb|ABE60949.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter hamburgensis X14] Length = 293 Score = 232 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 172/293 (58%), Gaps = 4/293 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L +L +++HLGMSGSF + + A + H ++ T + VI+N Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGATAPGDCHHPRNEDRAHDHVSFTMSSGASVIFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG+M ++ ++ P L+ LGPEP N F+A L K ++LK ALL+Q++V Sbjct: 121 DPRRFGYMKVIARTVLNDEPLLKGLGPEPLGNEFDAAMLARACRDKKTSLKAALLDQRVV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL AI AGGSSLR Sbjct: 181 AGLGNIYVCEALFRAHLSPRRLAATLASKTGGPADRAGRLVEAIHDVLNQAIKAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ G +GYFQ++F VY + GE C C ++R Q GRSTF+C CQK Sbjct: 241 DHRQTTGELGYFQHSFRVYDREGEKCRTPTCRGTVKRFTQNGRSTFWCPVCQK 293 >gi|163745032|ref|ZP_02152392.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] gi|161381850|gb|EDQ06259.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] Length = 283 Score = 232 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGQVIARAEVNRPDLRWPFPDRMAERLTGQRVSLLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +LEG S++VHLGMSG ++ + N H+HV + + N R+ + Sbjct: 61 LADLEGGESLLVHLGMSGRMLVSGDPLGQFQHNHPAPEKHDHVVLHMGNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ + L +LGPEP N F+ +L +N +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLNTADADAHKLLASLGPEPLGNDFHEAHLVAALKGRNMPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA + P RK + + + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGIHPARKAGRISASR------IAGLVPIIRQVLADAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ G+ C +C I RIVQ GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGKACRRPSCDGTIGRIVQGGRSSFYCPRCQR 283 >gi|306843600|ref|ZP_07476201.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] gi|306276291|gb|EFM57991.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] Length = 293 Score = 232 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 136/297 (45%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C+ CG + R VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQ 292 >gi|319638532|ref|ZP_07993294.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] gi|317400281|gb|EFV80940.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] Length = 275 Score = 232 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G+K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIEPHIDGKKIAKVTIRQFKLRWPVHPDLAQILAGRKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I + +H+H+ + T + Y+DPR Sbjct: 61 II-TFETGILLIHLGMSGSLRIFTADDERIATPDKHDHLDFVFDDGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP +F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAVLWYE-GIAEHHPLLEKLGPEPLSEAFDANYLYQKLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ I+ +L+ AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPLRPANKLTKKE------CALLVETIKAILLRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|260461958|ref|ZP_05810203.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] gi|259032205|gb|EEW33471.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] Length = 301 Score = 232 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 134/302 (44%), Positives = 183/302 (60%), Gaps = 16/302 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS G+ I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGARLVRVETRRPDLRFPFPERFSERLTGRTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-------------KPIKNPQHNHVTISLTNNT 107 + ++ +I HLGMSGSF IE + + K+ H+HV + + Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIEADADNETDDNGTLGVFHHERPKSAAHDHVVFHVASAA 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + RVI+NDPRRFGFM E +P L LG EP N+ + + L + S L Sbjct: 121 GA-RSRVIFNDPRRFGFMLFAE-GSPETHPMLAGLGVEPTGNALDGVLLASLLKGRRSPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q+++AG+GNIYV EALWRA LSP+R+T ++ + ++ +L + I+ V+ D Sbjct: 179 KAALLDQRLIAGLGNIYVSEALWRAGLSPLRETGTIARPGKKAREQSERLAEAIRSVISD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSLRDY+H DGS+GYFQ++F+VY + GEPC CG + R+VQ+GRSTFYC Sbjct: 239 AIAAGGSSLRDYMHADGSLGYFQHSFAVYDREGEPCAKPGCGGHVERVVQSGRSTFYCRT 298 Query: 287 CQ 288 CQ Sbjct: 299 CQ 300 >gi|209883645|ref|YP_002287502.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] gi|229541077|sp|B6JCQ7|FPG_OLICO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209871841|gb|ACI91637.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] Length = 294 Score = 231 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 175/294 (59%), Gaps = 5/294 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRNDLRFPLQTDFVARLGGRVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN----TNTKKYRVIY 116 L +L+ +++HLGMSGSF + + H+ + S T++ + + Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVAMDGGQEATPGIFHHPRSESRTHDHVVFEMDNGAVISF 120 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG+M +V + P L+ LGPEP N FNA L K ++LK ALL+Q++ Sbjct: 121 NDPRRFGYMKIVARADLEAEPFLKALGPEPLGNEFNAAMLAQACAGKATSLKAALLDQRV 180 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA LSP R+ +L G P +L+ I+ VL AI+AGGSSL Sbjct: 181 VAGLGNIYVCEALYRAHLSPKRRASTLASRTGAPSGHAERLVPAIRTVLNAAIEAGGSSL 240 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 241 RDHRQTTGELGYFQHSFQVYDREGEPCRTRGCKGTVKRFTQNGRSTFWCPSCQK 294 >gi|254485969|ref|ZP_05099174.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] gi|214042838|gb|EEB83476.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] Length = 283 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGQVIARADVNRPDLRWPFPPDMAARLTGQKVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG +I + +H+HV + + N RV + Sbjct: 61 LADLSSGESLLIHLGMSGRMLISGDPLGQFVHDHPSPEKHDHVVLHMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N FN +L +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTQNADAHKLLASIGPEPLGNDFNEAHLVAVLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I++VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGKIAATR------VAGLVPIIRQVLEEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGDPCRAEECTGQIARIVQSGRSSFYCAQCQR 283 >gi|84684525|ref|ZP_01012426.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus HTCC2654] gi|84667504|gb|EAQ13973.1| Formamidopyrimidine-DNA glycolase [Rhodobacterales bacterium HTCC2654] Length = 283 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 171/294 (58%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R+ LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGHRIARAEVRREGLRWPFPERMAERLTGATVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ N + ++HLGMSG +I T+ K H+HV + + R+ Sbjct: 61 LADLDTNETCLIHLGMSGRILISGTTLGKFHHEHPATEKHDHVVLDMDGGA-----RITL 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL T +P + LGPEP N FN YL + KN+ +K+ALL+Q+I Sbjct: 116 NDARRFGVMDLFTTGTGDLHPLIAALGPEPLGNEFNEGYLIAKLAGKNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGIHPARKAGRISAAR------IASLVPIIRDVLAEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G+PC C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYDQEGQPCKTPECQAKIARIVQSGRSSFYCPTCQR 283 >gi|284799871|ref|ZP_05985082.2| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] gi|284796762|gb|EFC52109.1| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] Length = 276 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIASHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I + +H+H+ + + T + Y+DPR Sbjct: 62 II-TFETGILLIHLGMSGSMRIFTADDERIAMPDKHDHLDFAFDDGT-----VLRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 116 KFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 175 GNIYANESLFKAGISPLRPANKLTKKE------CALLVENVKAVLQRAIETGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 229 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|83950593|ref|ZP_00959326.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] gi|83838492|gb|EAP77788.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] Length = 283 Score = 231 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGGTIARAEVNRPDLRWPFPDRMAERLAGQKVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + + +H+HV + + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDAQGRFVHDHPAPEKHDHVVLHMADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MD++ T +P L LGPEP N F+ Y + K+ALL+Q+I Sbjct: 116 NDPRRFGAMDILPTDGAEAHPLLAVLGPEPLGNGFHEEYFVAALKTRTMPAKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R+ +L + L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGISPKRRVNNLSSAR------IASLVPIIRDVLGDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ+ F VY + G+PC C ++ R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHNFDVYDREGQPCRRPGCDGIVARVVQSGRSSFYCPRCQR 283 >gi|83941662|ref|ZP_00954124.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] gi|83847482|gb|EAP85357.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] Length = 283 Score = 231 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L S++VHLGMSG +I + + +H+HV + N RV + Sbjct: 61 LADLSSGESLLVHLGMSGRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L ++GPEP N F+ +L KN+ +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTASADSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGRIAAKR------VGSLVPIIRDVLNEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKRADGELGYFQHSFDVYGRAAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 283 >gi|304392447|ref|ZP_07374388.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] gi|303295551|gb|EFL89910.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] Length = 297 Score = 231 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 137/297 (46%), Positives = 185/297 (62%), Gaps = 8/297 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L VM+ + + L R +LRF FP F+ A++ ++I +SRRAKYL Sbjct: 1 MPELPEVETVRGGLAPVMEGAVIDRLELRRPDLRFPFPDDFANASQNRRIEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-------TNTKKYR 113 L++L+ +I+HLGMSGSF S N H ++ +K R Sbjct: 61 LMDLDDGTVVIMHLGMSGSFRTLEGSAEAQPGNFHHEKSRDEKHDHVTFHLTTATGEKAR 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V+YNDPRRFGFM S +P +LG EP N+ +A Y+ + KN +K ALL+ Sbjct: 121 VVYNDPRRFGFMLSTPRSELDVHPSFASLGVEPVGNALDADYVAGKLADKNVPMKAALLD 180 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QKI+AG+GNIYVCEALWRA+LSP RK R+L+Q +G P L +L+ I+ V+ DAI AGG Sbjct: 181 QKIIAGLGNIYVCEALWRARLSPRRKARTLVQKSGRPTPRLEELVVHIRNVIADAIKAGG 240 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 S+LRD+ DG++GYFQ+ F+ Y + G+ C C I RIVQ+GRSTFYC CQ+ Sbjct: 241 STLRDHAATDGTLGYFQHTFAAYDQEGQDCQRVECSGTITRIVQSGRSTFYCPRCQR 297 >gi|56695071|ref|YP_165418.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] gi|81350839|sp|Q5LWT9|FPG_SILPO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56676808|gb|AAV93474.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] Length = 283 Score = 231 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGAVIARAEVNRPDLRWPFPDRMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + + + H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHDHPAAQKHDHVVFHMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ ++ L LGPEP N F+ YL +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLMATATADEHKLLMVLGPEPLGNDFHEDYLVAALKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP RK + + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGVSPRRKAGQIAAAR------VSALVPIIRQVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C ++RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAGCDGTVQRITQSGRSSFYCAQCQR 283 >gi|163743751|ref|ZP_02151125.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] gi|161383012|gb|EDQ07407.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] Length = 283 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + K +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFSGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQIAAPR------VGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GE C CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEACRRAGCGGTVGRITQSGRSSFYCGKCQR 283 >gi|163738131|ref|ZP_02145547.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] gi|161388747|gb|EDQ13100.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] Length = 283 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + K +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPQRKAGQIAAQR------VGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAKCDGTVGRITQSGRSSFYCGKCQR 283 >gi|154254090|ref|YP_001414914.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] gi|171769697|sp|A7HZC4|FPG_PARL1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154158040|gb|ABS65257.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] Length = 293 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 128/304 (42%), Positives = 176/304 (57%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + R +LRF P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVRRGLAPALEGRRIVHVTQRRPDLRFPLPELFAKRLTGRRVIRLERRAKYI 60 Query: 61 LIELEG------NLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNN 106 L+ +E +I+HLGMSG F + S + H+H+ + + Sbjct: 61 LVYMEPAKSGGAEDVLIMHLGMSGRFTVHGPSGSSAPGLFHLGMPGGETHDHIVFDMEDG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T RV+Y D RRFGFMDLV L LGPEP N F+A+ L + + + Sbjct: 121 T-----RVVYADHRRFGFMDLVAEPELASSRHLAALGPEPLGNEFSALVLAERLKGRRAP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL+Q+ VAG+GNIYVCEAL+RA +SP+R S+ + +L I+ VL Sbjct: 176 IKSALLDQRTVAGLGNIYVCEALYRAGISPLRTAASIGPAR------VERLTAAIRAVLQ 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCT 285 DAI AGGS+LRDY DG +GYFQ+AF+VYG+ GE C CG +RRIVQ+ RSTFYC Sbjct: 230 DAIAAGGSTLRDYAATDGELGYFQHAFAVYGREGEACSKPGCGGTVRRIVQSARSTFYCP 289 Query: 286 YCQK 289 CQ+ Sbjct: 290 ACQR 293 >gi|254511767|ref|ZP_05123834.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] gi|221535478|gb|EEE38466.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] Length = 283 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGVVIDRADVNRPDLRWPFPDRMADRLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG + + + + H+HV + N R+ + Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGQFVHDHPAVQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ Q+ L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLQTATAEQHKLLSVLGPEPLGNDFHEQHLIDAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+R ++SP RK + + L+ I++VL DAI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLYRGRVSPRRKAGQISAPR------VAALVPIIRQVLQDAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC + CG I+RI Q+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRTESCGATIKRITQSGRSSFYCAQCQR 283 >gi|163757770|ref|ZP_02164859.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] gi|162285272|gb|EDQ35554.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] Length = 320 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 136/296 (45%), Positives = 185/296 (62%), Gaps = 8/296 (2%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L VM+ + + R +LRF FP F+ G++II + RRAKYLL Sbjct: 24 PELPEVETVRRGLQPVMEGARIIRVEQRRADLRFPFPEDFAKRLEGRQIIALGRRAKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-------HVTISLTNNTNTKKYRV 114 + + + +I HLGMSGSF IE + H+ H + + + RV Sbjct: 84 ADFDDGMVLISHLGMSGSFRIEPDGDSPLTPGVFHHERSKDDKHDHVVFHIDGPAGRARV 143 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 IYNDPRRFG+MDL+ + ++P R+LG EP NS A L + K + LK ALL+Q Sbjct: 144 IYNDPRRFGYMDLMVRAELAEHPWFRSLGVEPTGNSLEADELARRLAGKAAPLKAALLDQ 203 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +I+AG+GNIYVCEALWRA+LSP + L+ G P+ L +L +I++V+ +AI AGGS Sbjct: 204 RIIAGLGNIYVCEALWRARLSPRKPAGRLVTKAGQPRKALERLTGDIREVISEAIAAGGS 263 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 SLRD++ DG++GYFQ+ FSVY + G+ C CG +RRIVQ+GRSTF C CQK Sbjct: 264 SLRDHIQTDGTLGYFQHGFSVYDREGKACPRPGCGDTVRRIVQSGRSTFMCARCQK 319 >gi|254295384|ref|YP_003061407.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] gi|254043915|gb|ACT60710.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] Length = 281 Score = 229 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + L R +LRF FP FS +G KI + RRAK+L Sbjct: 1 MPELPEVETVRRGLIPAMQGRVIERVELRRADLRFPFPDDFSQRLQGVKIERLDRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 ++EL + +HLGM+G F IE NP+H+HV L +N +V + Sbjct: 61 MVELSSGELLTMHLGMTGRFSIEGEGFDIFAHAIAGNPKHDHVVFHLEDN-----LKVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM+L + LGPEP N F+A +L KK+S +K+ALL+Q++ Sbjct: 116 NDPRRFGFMELYRAGEAEKSKRFSKLGPEPLSNHFSAAHLNEVLQKKSSPIKSALLDQRV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R + ++ KL ++ V+ +AI+AGGSS+ Sbjct: 176 VAGLGNIYVCEALFRAGISPTRISSTIKGKR------AEKLAPIVKDVISEAIEAGGSSI 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG +GYFQ+ F VYG+ EPC C + ++RI Q+GRSTF+C CQK Sbjct: 230 SDFAQTDGKLGYFQHNFLVYGRENEPC-KVCDKPVQRISQSGRSTFFCASCQK 281 >gi|254453376|ref|ZP_05066813.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] gi|198267782|gb|EDY92052.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] Length = 283 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 169/294 (57%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L+ M+ +T ++R +LR+ FP + G + + RR+KY+ Sbjct: 1 MPELPEVETVRAGLVPSMQGHVITRAEVNRPDLRWPFPDDMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++I+HLGMSG + + +H+HV + N RV + Sbjct: 61 LADLSTGETLIIHLGMSGRMTVSGDPLGQFHHDHPAPAKHDHVVFHMGNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL +T + ++ +GPEP N FN YL F KN+ +K ALL+Q++ Sbjct: 116 NDPRRFGAMDLAKTDALNDHWLIKPIGPEPLGNGFNEAYLVKAFAAKNTPVKTALLDQRL 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA + P RK + L + + L+ ++ VL AI AGGSSL Sbjct: 176 IAGLGNIYVCEVLFRAHIDPTRKAKDLSKKQ------IASLVPIVRDVLNKAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ AF Y + G PC C I RIVQ+GRSTFYC CQ+ Sbjct: 230 KDYRQADGELGYFQKAFQAYDRAGHPCQTPECTGSIARIVQSGRSTFYCPKCQR 283 >gi|239833244|ref|ZP_04681573.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] gi|239825511|gb|EEQ97079.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] Length = 293 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 135/298 (45%), Positives = 181/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDRFAQRLSGRRISALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--------HNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE H+HV L Sbjct: 61 TIHLDDGLSVISHLGMSGSFRIETDEGGDTPGQFHHERSKLSAHDHVVFHLQRADGGSA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFM E +P L LG EP N + L+ F + + LK ALL Sbjct: 120 RVVYNDPRRFGFMLFAEEGTLDSHPLLAGLGIEPTGNLLSGAVLSELFSGRKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP+R S+ Q+ + + +L +I+ V+ +AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSHLSPMRAAGSVAQD----PETMERLASDIRTVIAEAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC C + R VQ+GRSTF+C CQ+ Sbjct: 236 GSTLKDYIQADGALGYFQHSFSVYGREGEPCRNPACKGFVERAVQSGRSTFFCASCQQ 293 >gi|241759723|ref|ZP_04757823.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] gi|241319731|gb|EER56127.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] Length = 275 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPDLAQILAGCKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I + +H+H+ + T + Y+DPR Sbjct: 61 II-TFETGILLIHLGMSGSLRIFTADDERIATPDKHDHLDFVFDDGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKNQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPLRPANKLTKKE------YALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VY + EPC+ CG +I + R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYSRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|153008052|ref|YP_001369267.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] gi|151559940|gb|ABS13438.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] Length = 302 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 184/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP HF G++I + RRAKYL Sbjct: 10 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDHFVERLSGRRISALGRRAKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE + K H+HV L Sbjct: 70 TIHLDDGLSVISHLGMSGSFRIETDDDGGTPGEFHHERSKLSAHDHVVFHLLRADGAPA- 128 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM E +P L +LG EP N + L F + + LK ALL Sbjct: 129 RIVYNDPRRFGFMLFAEEGTLDSHPLLASLGIEPTGNLLSGTILAELFKGRRTPLKAALL 188 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP++ S+ QN I+ +L +I+ V+ +AI AG Sbjct: 189 DQRLIAGLGNIYVCEALWRSHLSPMQTAGSVAQN----PAIMEQLAADIRTVIAEAIAAG 244 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC C ++ R VQ+GRSTF+C CQ+ Sbjct: 245 GSTLKDYIQADGALGYFQHSFSVYGREGEPCKNPACNGIVERAVQSGRSTFFCASCQQ 302 >gi|150398756|ref|YP_001329223.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] gi|166198753|sp|A6UFF8|FPG_SINMW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150030271|gb|ABR62388.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] Length = 306 Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 147/308 (47%), Positives = 187/308 (60%), Gaps = 21/308 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F A G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFEDAVAGRRIVALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK------------------PIKNPQHNHVTIS 102 IELEG II HLGMSGSF IE + K+ +H+HV Sbjct: 61 TIELEGGDVIIAHLGMSGSFRIEFDGPGEGRIKESADPAVPGDFHRPRSKDEKHDHVVFH 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + RVIYNDPRRFGFM L ++ LR LG EP N+ +A YL +F Sbjct: 121 LD--ASCGPARVIYNDPRRFGFMALARREALAEHVFLRGLGEEPTGNALDAAYLAARFSG 178 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K LK ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ PK L +L I+ Sbjct: 179 KAQPLKAALLDQRTIAGLGNIYVCEALWRSGLSPKRAAGTLVDKRARPKQALVQLTDAIR 238 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRST 281 V+ DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C + C + RIVQAGRST Sbjct: 239 AVIADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTSGCRGTVERIVQAGRST 298 Query: 282 FYCTYCQK 289 FYC +CQK Sbjct: 299 FYCPHCQK 306 >gi|254471056|ref|ZP_05084459.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] gi|211960198|gb|EEA95395.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] Length = 300 Score = 228 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 132/300 (44%), Positives = 176/300 (58%), Gaps = 11/300 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L N T+ + R +LRF F F ++++ SRRAKYL Sbjct: 1 MPELPEVETVRRGLAPFFDNATICRVEQRRPDLRFPFGDDFVERLENRQVVSFSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----------KNPQHNHVTISLTNNTNTK 110 L++L+ +++HLGMSGSF T A+P K+PQH+HV + Sbjct: 61 LLDLDSGDVLVMHLGMSGSFRWIETEDAEPTQTVEMYHAKGKHPQHDHVIFHVRPADRET 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++IYNDPRRFGFM L+ S +P +G EP N + YL F + ++LK A Sbjct: 121 IVKIIYNDPRRFGFMVLIPRSKLATHPMFVDMGIEPLGNELDGAYLAKLFENRKTSLKAA 180 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LLNQK +AG+GNIYVCEALWR LSP +L +G P +L I++VL +AI Sbjct: 181 LLNQKFIAGLGNIYVCEALWRTGLSPFNSASTLAGKSGKPLKKADELSNHIREVLQEAIK 240 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 +GGSSL+D+ DGS+GYFQ+ FSVY + G+ C C +I R VQ GRSTF+C CQK Sbjct: 241 SGGSSLKDHRQADGSLGYFQHNFSVYDREGQACRTPKCSGVIERKVQNGRSTFFCPKCQK 300 >gi|260431703|ref|ZP_05785674.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415531|gb|EEX08790.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] Length = 283 Score = 228 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGVVIERADVNRPDLRWPFPERMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + +H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHHHPMPQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ Q+ L LGPEP N FN YL F + + +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTATAEQHKLLAVLGPEPLGNDFNETYLIDAFRGRATPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP RK + + L+ I+ VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARVSPRRKAGQISAGR------VGALVPVIRTVLTEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC + CG IRRI Q+GRSTFYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTEGCGAEIRRITQSGRSTFYCAQCQR 283 >gi|261363684|ref|ZP_05976567.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] gi|288568235|gb|EFC89795.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] Length = 275 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGINPHIQGKKVADVVLRQTKLRWQVNPQLAELLAGQEVLICRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I A+ +H+HV I + T + Y+DPR Sbjct: 61 II-SFATGILLIHLGMSGSLRIFTDGDARIDHPDKHDHVDIVFADGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIAEHHPLLEKLGPEPLSDDFSADYLYQKLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP R + + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPHRPADKIKKKECVV------LVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRYNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|310816813|ref|YP_003964777.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] gi|308755548|gb|ADO43477.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] Length = 286 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ VM+ + + R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLLPVMEGQVIAAADVRRPDLRWPFPPDMAQRLTGKRVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG +I + +H+HV + + R+ + Sbjct: 61 LADLDSAETLLIHLGMSGRMLISGVMIGEYEHARALPEKHDHVVLDMAGGA-----RIAF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T Q P + LGPEP N F+ YL + + + +K+ALL+Q I Sbjct: 116 NDARRFGAMDLMATDAVDQNPLIAVLGPEPFGNDFSPAYLAARLAGRKTPIKSALLDQHI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA++ P R L +L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARIHPARLAGDLTALEAD------RLVPLIRDVLDEAIRAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 RDY DG++GYFQ+AF VYG+ G+PC C + RIVQAGRS+F+C CQ Sbjct: 230 RDYQKTDGTLGYFQHAFQVYGREGQPCSTPGCIGTVARIVQAGRSSFFCPLCQ 282 >gi|110677612|ref|YP_680619.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] gi|122973136|sp|Q16DL0|FPG_ROSDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109453728|gb|ABG29933.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] Length = 283 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIARADVNRPDLRWPFPADMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHSHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +NS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ PIRK + + L+ I++VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPIRKAGKISGAR------VATLVPIIREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C I+RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR 283 >gi|90421901|ref|YP_530271.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB18] gi|122477567|sp|Q21CD4|FPG_RHOPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90103915|gb|ABD85952.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB18] Length = 293 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 125/298 (41%), Positives = 172/298 (57%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + R +LRF + G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPAMAGARIDGFEARRADLRFALQPDLATRLIGQTVKGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L EL +++HLGMSGSF + + + H+HV ++N Sbjct: 61 LAELSSGDVLLMHLGMSGSFRVLQGEASGAPGAFHHPRNDDRAHDHVVFRMSNGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M ++ P L+ LGPEP NSF+A L + ++LK ALL Sbjct: 116 VVVFNDPRRFGYMKILAPGEIADEPFLKGLGPEPLGNSFDAAMLASACAGRKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+ A LSP R +L G P + +L++ I+ VL AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFGAHLSPKRLAATLATRTGAPTERAERLVEAIRAVLHAAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+VY + GEPC S C +++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDREGEPCRSKGCDGVVKRFVQNGRSTFWCPKCQK 293 >gi|241207318|ref|YP_002978414.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861208|gb|ACS58875.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 296 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 144/296 (48%), Positives = 183/296 (61%), Gaps = 7/296 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN------HVTISLTNNTNTKKYRV 114 L++L+ ++I HLGMSGSF IE + + H H + RV Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAVSGMPGEFHHARSKDEKHDHVVFHLQGLGGPRRV 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL+Q Sbjct: 121 VYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALLDQ 180 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K +AG+GNIYVCEALWRA LSPIR +L+ G PK L L+ I+ V+ DAI AGGS Sbjct: 181 KNIAGLGNIYVCEALWRAHLSPIRAAGTLVTPGGRPKAQLDLLVASIRDVIADAIAAGGS 240 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 SLRD++ DGS+GYFQ++FS Y + + C CG + RIVQAGRSTFYC CQK Sbjct: 241 SLRDHIQTDGSLGYFQHSFSAYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|325134462|gb|EGC57107.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13399] Length = 280 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|85706182|ref|ZP_01037277.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] gi|85669346|gb|EAQ24212.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] Length = 283 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +M+ + ++R +LR+ FP SA G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPIMEGQVIARATVNRPDLRWPFPPEMSARLTGQRVLALRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + +H+HV + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDPLGQFVHAHPAPEKHDHVVLDMAGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N FN +YLT +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTTTAESHPLLARIGPEPLGNDFNELYLTAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA +SP+ + +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAGISPLTRAGTLSAKR------AASLVPIIRDVLRDAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+ C S C +I R++QAGRS+FYC CQ+ Sbjct: 230 RDFRQTDGELGYFQHSFDVYGREGDLCRNSGCTGLITRVIQAGRSSFYCPKCQR 283 >gi|240140864|ref|YP_002965344.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] gi|240010841|gb|ACS42067.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] Length = 299 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV + N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMVFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|126734088|ref|ZP_01749835.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] gi|126716954|gb|EBA13818.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] Length = 283 Score = 227 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM+ + ++R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMEGHVIAQADVNRPDLRWPFPAQMAKRLTGKRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG +I + + H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRMLISGHTVGEFHHPHPVPAKHDHVVFHMDDGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ET+ + + +R LGPEP N+FN YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMETATQDDHWLIRDLGPEPLGNAFNESYLIERLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VSGLGNIYVCEVLFRAGIHPARKAGRISAAR------VATLVPLIRDVLSEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + GEPC+ C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHVFQVYDREGEPCVTPGCDRTITRIVQSGRSSFFCPQCQR 283 >gi|15677162|ref|NP_274315.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|9911065|sp|P55044|FPG_NEIMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|7226536|gb|AAF41671.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|316984086|gb|EFV63064.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] gi|325140479|gb|EGC63000.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis CU385] gi|325200078|gb|ADY95533.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] Length = 275 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|297250511|ref|ZP_06864459.2| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] gi|296838830|gb|EFH22768.1| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] Length = 280 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+L+D+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLKDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|149912815|ref|ZP_01901349.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] gi|149813221|gb|EDM73047.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] Length = 283 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + GK ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGAVIARADVNRPDLRWPLPVDMATRLSGKTVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG + +H+HV + N R+ + Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGAFHHDHPAPAKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L LGPEP N F+ YL +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLISTPKADTHPLLAKLGPEPLGNQFDESYLADALSGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP R+ R+L + L+ I+ VL DAI+AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARISPKRRARNLSRAR------AAALVPIIRDVLRDAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VY + G+PC C I RIVQ+GRS+FYCT CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYDREGDPCRTPGCTGTITRIVQSGRSSFYCTLCQR 283 >gi|126730152|ref|ZP_01745964.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] gi|126709532|gb|EBA08586.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] Length = 283 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGQVIAHAQVNRPDLRWPFPERMAQRLTGAHVLQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L + ++++HLGMSG ++ + +H+HV + N RV + Sbjct: 61 LADLSTDETLLIHLGMSGRMLVSGDPLGQFVHDHPMPEKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L +GPEP N+F +L + +N+ +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMSTRAVDAHPLLARIGPEPLGNAFTESHLVERLKGRNTPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R+ + P R+ + + L+ ++ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRSGIHPARRCVRISAAR------ISTLVPIVRDVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCKAPGCTGTIHRIVQSGRSSFFCPKCQR 283 >gi|261400681|ref|ZP_05986806.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|269209592|gb|EEZ76047.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|309379224|emb|CBX22181.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 275 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ + L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHQLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG +I + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLIVKETLGQRGTFYCPNCQK 275 >gi|92116584|ref|YP_576313.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91799478|gb|ABE61853.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] Length = 289 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 128/294 (43%), Positives = 178/294 (60%), Gaps = 10/294 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ +T + L R +LRF F F+A G++I+ + RRAK+L Sbjct: 1 MPELPEVETVRRGLQPVMEGARITRVELRRADLRFPFQPDFAARLTGQRIVGLGRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 + +L +++HLGMSGSF I ++HV + L++ + Y Sbjct: 61 MADLASGDVLMMHLGMSGSFRIGAVPVGAFHHPRNVERVNDHVVLRLSSGKI-----ITY 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM +V S P L+ LGPEP N+F+A L K ++LK ALLNQ + Sbjct: 116 NDPRRFGFMKIVARSALDDEPLLKGLGPEPLGNAFDAATLAKACAGKTASLKAALLNQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E L RA+LSP R+ +L ++G P D +L+ I+ VL +AI GG++L Sbjct: 176 VAGLGNIYAAETLHRARLSPKRRASTLASHSGAPTDRARQLVAAIRAVLTEAIAVGGATL 235 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 R+ H DG +GYFQ++F VY G+PC C ++RR VQ GR+TF+C CQK Sbjct: 236 RNCRHPDGKLGYFQHSFEVYNHEGQPCTTPGCDGVVRRFVQNGRATFWCPKCQK 289 >gi|254563373|ref|YP_003070468.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens DM4] gi|254270651|emb|CAX26655.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens DM4] Length = 299 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 171/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|255067093|ref|ZP_05318948.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] gi|255048689|gb|EET44153.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] Length = 275 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 159/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGISPHIQGKKVADVVLRQTKLRWQVNPQLAEILAGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I A+ +H+H I + T + Y+DPR Sbjct: 61 II-GFATGILLIHLGMSGSLRIFTDGDARIDHPDKHDHADIVFADGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+ YL +F + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIAEHHPLLEKLGPEPLSDDFSVEYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++ +SP R + + L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKSGISPHRPADKVKKKECAV------LVETIKSVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|163853444|ref|YP_001641487.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] gi|229541074|sp|A9W8R7|FPG_METEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163665049|gb|ABY32416.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] Length = 299 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|114762146|ref|ZP_01441614.1| formamidopyrimidine-DNA glycosylase [Pelagibaca bermudensis HTCC2601] gi|114545170|gb|EAU48173.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. HTCC2601] Length = 283 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G +I+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNRIAQAQVNRPDLRWPFPERMAERLTGARILQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + +H+HV + + + RV + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDMADGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ +P L LGPEP N+F+ +L +N +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMQTATAEAHPLLAALGPEPLGNAFSESHLVAALAGRNMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ R + + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVRRISEKR------IASLVPVIREVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC +CG + R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTPDCGATVHRMVQSGRSSFYCPRCQR 283 >gi|146337247|ref|YP_001202295.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. ORS278] gi|166215612|sp|A4YJG9|FPG_BRASO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146190053|emb|CAL74045.1| Bifunctional mutM protein:Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase); (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Bradyrhizobium sp. ORS278] Length = 293 Score = 226 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 127/298 (42%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVTAEARRGDLRFPFQPDFVKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + K+ H+HV +++ + Sbjct: 61 LADLGSGDVLLMHLGMSGSFRVIKPEHEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIETEPHLKDLGPEPLGNEFDAAMLARACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHAKRLVEAIHTVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC ++ C +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTDGCEGVVKRFVQNGRSTFWCPKCQR 293 >gi|325136200|gb|EGC58808.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M0579] Length = 280 Score = 226 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + K +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|254418470|ref|ZP_05032194.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] gi|196184647|gb|EDX79623.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] Length = 287 Score = 226 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 168/292 (57%), Gaps = 9/292 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + ++R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLTPVLAGARLSRVRINRPDLRFPFPDRFVERLEGATVQRIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT--NTKKYRVIYND 118 L+ L + I HLGM+G F ++ T + + + + R+ Y D Sbjct: 61 LMPLSSGETWITHLGMTGRFTLDGTQLGEFEEAAPIAGKHEHFSGCAVRDGASTRIGYAD 120 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q+IVA Sbjct: 121 ARRFGFMGLIPTDQVEVHPWFAGLGPEPLGNGFSGAHLVEAFVGKTQNIKVSLLDQRIVA 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYVCEAL+RA++SP+ S+ K L +L ++ VL DAI AGGS+L+D Sbjct: 181 GLGNIYVCEALYRARISPLVAAGSVS------KVRLERLAAVVRDVLNDAIAAGGSTLKD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 + + +G GYFQ+ F VYG+ G+ C C ++ RIVQ GRSTFYC CQK Sbjct: 235 FANAEGGQGYFQHRFDVYGREGQACRGEGCSGVVARIVQGGRSTFYCPSCQK 286 >gi|294789507|ref|ZP_06754743.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] gi|294482587|gb|EFG30278.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N +T + + + LR+ P +G+ + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQKITQVIVRQPKLRWKMPDDLVQILQGQVVRHCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ +++HLGMSGS I H + K H+H + T + Y+DPR Sbjct: 61 LIELDA-GVLMIHLGMSGSLRIFHGRQPEAGK---HDHFDAIFADGT-----LLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + L+ LG EP + F A YL +Q KN +K +++ IV G+ Sbjct: 112 RFGAILWLAGVAEH-HDLLKNLGVEPLSDEFTASYLLNQLRGKNRAIKLMIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A L P R SL N+ L+ I+ +L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAALLPNRPANSLSLND------CENLVSAIKHILQRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ + VYG+ GE C CG +I + V R TFYC CQK Sbjct: 225 NSDGKSGYFQQEYKVYGRAGETC-KMCGSLIEKTVLGQRGTFYCANCQK 272 >gi|170750114|ref|YP_001756374.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] gi|238688767|sp|B1LWY6|FPG_METRJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170656636|gb|ACB25691.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] Length = 296 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 124/299 (41%), Positives = 168/299 (56%), Gaps = 17/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R NLRF FP F+A G+ + ++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPALVGARFSRVTLRRANLRFPFPERFAARLEGRTVTGLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ ++++HLGMSG F + + P+H+HV ++++ Sbjct: 61 TAALDSGETLVMHLGMSGRFDVALPDGSNLSPGDFYLEGAQGTPKHDHVVMAMSTGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV ++ +G EP + + F K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVPSAELAACRHFARMGVEP-LDGLTGAVIARLFRHKIAPLKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P SL + +G P L + I +VL +A+ Sbjct: 175 LLDQRLIAGLGNIYVCEALHRARLHPEAPAGSLARPDGRPTPEANALAKAIVQVLEEAVK 234 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DGS G FQ+AF VY + G PC C I RIVQA RSTF+C CQ Sbjct: 235 AGGSTLRDYAHTDGSAGAFQHAFRVYDRVGLPCSRPGCAGAITRIVQANRSTFFCATCQ 293 >gi|254670484|emb|CBA06192.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha153] Length = 275 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|261392423|emb|CAX49968.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis 8013] Length = 275 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|118590464|ref|ZP_01547866.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] gi|118436927|gb|EAV43566.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] Length = 305 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 130/297 (43%), Positives = 180/297 (60%), Gaps = 10/297 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + +T + +R +LRF FP F+ G+++ +SRR+KYL Sbjct: 9 MPELPEVETVKRGLAPTFEGALITKVDQNRPDLRFPFPDGFADRLTGRRLTVLSRRSKYL 68 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +++ +++HLGMSGSF IE+ KNP+H+HV L + + Sbjct: 69 LGDIDSGDVLVMHLGMSGSFRIENDLAGATPGSFVHARSKNPKHDHVVFHLESADGA-RA 127 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFMDL+ ++P R LG EP N L F+ + + LK ALL Sbjct: 128 RIVYNDPRRFGFMDLIARPALAEHPFFRDLGLEPLGNDLGGETLARLFNGRKTPLKAALL 187 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCEALWR LSP R +L+ G P +L I+ L DAI AG Sbjct: 188 NQKLIAGLGNIYVCEALWRTGLSPERAAGTLVTRTGRPTKKAEELAANIRATLEDAIRAG 247 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ DG++GYFQ++F+VY + GE C C + R+VQ+ RSTF+C CQ Sbjct: 248 GSSLRDHTQADGTLGYFQHSFAVYDREGETCRTPGCTGTVARLVQSNRSTFHCPACQ 304 >gi|83944872|ref|ZP_00957238.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] gi|83851654|gb|EAP89509.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] Length = 286 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 127/297 (42%), Positives = 171/297 (57%), Gaps = 19/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + R +LRF FP F+ G + + RR+KYL Sbjct: 1 MPELPEVETVRRGLIPAMEGRRILRAEARRPDLRFPFPDRFAERLTGTVVERLDRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK--------NPQHNHVTISLTNNTNTKKY 112 L L ++++HLGMSG F + ++ NP H+HV + Sbjct: 61 LARLGSGETLLMHLGMSGRFSVTAEDISRQPGDFVYAAPANPAHDHVVFQMEGG-----V 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V YNDPRRFGFM L ET + P LR LGPEP N F+ L F + S +K LL Sbjct: 116 TVTYNDPRRFGFMTLFETDAEAAQPYLRDLGPEPLSNGFSEDLLNTAFKGRRSPIKAGLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +VAG+GNIYVCEALWRA++SP R +S+ +L ++ V+ +AI+AG Sbjct: 176 DQHVVAGLGNIYVCEALWRAQISPRRLCQSIPGAR------AARLAPAVRSVISEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ+ F VYG+ GEPC + RIVQ+GRSTF+C CQ+ Sbjct: 230 GSTLRDYAGADGAMGYFQHRFDVYGREGEPCHRCEDSRVERIVQSGRSTFFCPSCQR 286 >gi|260428860|ref|ZP_05782837.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] gi|260419483|gb|EEX12736.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] Length = 283 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNTIAKALVNRPDLRWPFPERMAERLTGARVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + +H+HV + L + R+ + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDLADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG M+L+ T+ Q+P L LGPEP N+F+ +L + +K+ALL+QKI Sbjct: 116 NDPRRFGAMNLMPTATAEQHPLLAALGPEPLGNAFSESHLMAALSGRTMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVSRISAKR------IASLVPVIRQVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C + + RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCRTPGCTETVHRIVQSGRSSFYCPSCQR 283 >gi|331701575|ref|YP_004398534.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] gi|329128918|gb|AEB73471.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] Length = 280 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K T+ + + + P+ F A RGK I + RR KYL Sbjct: 1 MPELPEVETVRRGLTQLVKGSTIQSVDVLYAKMINLPPNDFKKALRGKTIEKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + +E +H H+ LT+ ++ YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYDVEPEDAP----VGKHTHIIFHLTDGR-----QLRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + Q L+T+GPEP ++ Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGTEMQVAGLKTIGPEPTEDDLTVDYMQKIFGKSRKVIKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L + +L + I L AI G+++ Y Sbjct: 172 GNIYADEVLWLSKINPQQPANTLTLRQ------IKELRKNIIAELAKAIAGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN +VYG+ GEPC S CG I +I A R T +C CQ Sbjct: 226 TAYGEAGSFQNQLNVYGREGEPC-SRCGTKIVKIKLAQRGTHFCPKCQ 272 >gi|115522499|ref|YP_779410.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] gi|122297836|sp|Q07UF4|FPG_RHOP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115516446|gb|ABJ04430.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] Length = 293 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 126/293 (43%), Positives = 175/293 (59%), Gaps = 4/293 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + L R +LRF F F+ G+ + +SRRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGARFDTVALRRADLRFPFQPDFTDRLTGQTVTGLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L +L ++++HLGMSGSF + + H ++ + + V++N Sbjct: 61 LADLSSGDALLMHLGMSGSFRVIEPGGEATPGDFHHPRSEDRSHDHVVFSMSSGKTVVFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG+M L + P L+ LGPEP N+F+A L K ++LK ALL+Q++V Sbjct: 121 DPRRFGYMKLFRRAAIEDEPFLKGLGPEPLGNAFDASMLARACAGKKTSLKAALLDQRVV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL+RA LSP R +L G P + KL++ I+ VL +AI AGGSSLR Sbjct: 181 AGLGNIYVCEALFRAHLSPKRLAATLATKAGGPTERAEKLVEAIRTVLHEAIQAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 D+ G +GYFQ++F+VY + EPC + CG +++R VQ GRSTF C CQK Sbjct: 241 DHRQTSGELGYFQHSFAVYDRESEPCRTKGCGGVVKRFVQNGRSTFCCPKCQK 293 >gi|325205930|gb|ADZ01383.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M04-240196] Length = 280 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|330957096|gb|EGH57356.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ +++ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYASEALFAAGIDPRREAKTISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|218532304|ref|YP_002423120.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] gi|254789442|sp|B7KN75|FPG_METC4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218524607|gb|ACK85192.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] Length = 299 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|86747745|ref|YP_484241.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] gi|123408924|sp|Q2J2I0|FPG_RHOP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86570773|gb|ABD05330.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] Length = 293 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 129/292 (44%), Positives = 174/292 (59%), Gaps = 4/292 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F F+A G+ I + RRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGFRIDRAMANRCDLRFPFQPDFAARLTGQTITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L +L +++HLGMSGSF + + + H ++ + RVI+N Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVNGAGDATPGEFHHPRSEDRTHDHVVFEMSSGARVIFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM + + P L+ LGPEP N+F+A L K ++LK ALL+Q++V Sbjct: 121 DPRRFGFMKIFARAAIDDEPHLKGLGPEPLGNAFDAAMLARACAGKQTSLKAALLDQRVV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRA LSP RK +L G P D +L+ I+ VL DAI AGGSSLR Sbjct: 181 AGLGNIYVCEALWRAHLSPKRKASTLADRKGAPTDRAVRLVDAIRAVLGDAIKAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ G +GYFQ++F+VY + GE C C ++R+VQ GRSTF+C+ CQ Sbjct: 241 DHRQTSGELGYFQHSFAVYDREGERCRTPGCNGTVKRLVQNGRSTFWCSGCQ 292 >gi|302381128|ref|YP_003816951.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] gi|302191756|gb|ADK99327.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] Length = 287 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 123/292 (42%), Positives = 170/292 (58%), Gaps = 9/292 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ +T + +R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLVGAALTHVRQNRPDLRFPFPERFVERLSGAVVERIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYND 118 L L + + HLGM+G F ++ + + H +SL + R+ + D Sbjct: 61 LTALSTGETWVTHLGMTGRFTVDGEQLGEFEEPAPISGKHEHMSLCALRDGAATRIGFAD 120 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q+ VA Sbjct: 121 ARRFGFMGLMATEAVDSHPWFAGLGPEPLGNGFSGAHLAEAFDGKKQNIKVSLLDQRTVA 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYVCEAL+RA++SP + + L +L +++VL DAI AGGS+LRD Sbjct: 181 GLGNIYVCEALYRARISPRIAAGKVSRPR------LERLAVVVREVLNDAIAAGGSTLRD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 + + DG GYFQ+ F VYG+ G+PCL +C ++RRIVQ GRSTFYC CQ+ Sbjct: 235 FANADGGHGYFQHRFDVYGREGQPCLGEDCSGVVRRIVQGGRSTFYCPGCQR 286 >gi|121635008|ref|YP_975253.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|120866714|emb|CAM10466.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|325138277|gb|EGC60846.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis ES14902] gi|325142419|gb|EGC64823.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 961-5945] Length = 280 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|325144563|gb|EGC66862.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240013] Length = 275 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|159045909|ref|YP_001534703.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] gi|189044587|sp|A8LNK8|FPG_DINSH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157913669|gb|ABV95102.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] Length = 284 Score = 224 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 17/295 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + + R +LR+ P + GK+I+ ++RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPDLRWPLPANMQTRLEGKRILRLARRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-----PQHNHVTISLTNNTNTKKYRVI 115 L EL+ ++I+HLGMSG +I + +H+HV + RV+ Sbjct: 61 LAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLEKHDHVVLDFDTGA-----RVV 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +ND RRFG MDL ET+ Q+P L TLGPEP N+F+ YLT + + + +K+ALL+QK Sbjct: 116 FNDARRFGAMDLCETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLDQK 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCEAL++A +SP+RK + + + L+ I+ VL DAI+AGGSS Sbjct: 176 VVAGLGNIYVCEALFQAGISPLRKAGRVSETR------IASLVPIIRTVLGDAIEAGGSS 229 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG +GYFQ+ F VY + PC++ C ++RR+VQ+GRS+FYC CQ+ Sbjct: 230 LRDYRQTDGDLGYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR 284 >gi|313668434|ref|YP_004048718.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica ST-640] gi|313005896|emb|CBN87352.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica 020-06] Length = 275 Score = 224 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ PC+ CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNLPCV-RCGGLVVKETLGQRGTFYCPNCQK 275 >gi|163733258|ref|ZP_02140702.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] gi|161393793|gb|EDQ18118.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] Length = 283 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIKQADVNRPDLRWPFPVDMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHRHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KNS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADAHKLLAVLGPEPLGNDFHESHLIAAFKNKNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ P RK + + L+ +++VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPTRKAGKISGAR------VAGLVPIVREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F YG+ G+PC C IRRIVQ+GRS+FYCT CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDAYGREGDPCKRSGCTGQIRRIVQSGRSSFYCTQCQR 283 >gi|254673150|emb|CBA07967.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha275] gi|325132503|gb|EGC55196.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M6190] gi|325198448|gb|ADY93904.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis G2136] Length = 275 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] gi|122266079|sp|Q03GC2|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] Length = 275 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 158/288 (54%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ VT++ + + F+ GKKI++V RR KYL Sbjct: 1 MPELPEVETVRRGLAALVEGKIVTNVVVRYSKMVSPKAEIFAEELEGKKILNVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ G+ +++ HL M G + + + + +H+HV L + + + YND R Sbjct: 61 LIDFSGDYTMVSHLRMEGKYSVVD----RREEYGKHDHVIFELDDGKD-----LRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV T + Q L+T+GPEP + YLTHQ + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQSMIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P + + +L + L + I + L AI+A G+++ Y+ Sbjct: 172 GNIYADEVLWLSKIHPQQISNTLTDEE------IAILRESIFEELQLAIEAKGTTVFSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG G FQN VY + G PC CG I RI A R T +C +CQ Sbjct: 226 NADGHAGSFQNQLHVYHRQGLPCQ-RCGTPIERIKVAQRGTHFCPHCQ 272 >gi|319944878|ref|ZP_08019140.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] gi|319741448|gb|EFV93873.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] Length = 275 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 161/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + +G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIQGKKVADVVLRQTRLRWQVNPQLAEILKGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I A+ +H+HV + + T + Y+DPR Sbjct: 61 II-GFETGILLIHLGMSGSLRIFTCGDARIEHPDKHDHVDMVFADGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E + +P L LGPEP + F+A YL +F + +K AL++ +V G+ Sbjct: 115 RFGAISWHE-GIAEHHPLLEKLGPEPLSDDFSADYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+ + P R + + L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRSGILPHRPANKIKKKECAV------LVETIKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-CCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|304387407|ref|ZP_07369598.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] gi|304338500|gb|EFM04619.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] Length = 280 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|126738631|ref|ZP_01754336.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] gi|126720430|gb|EBA17136.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] Length = 283 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGAVIKEARVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L EL+ ++++HLGMSG + + + +H+HV + N R+ + Sbjct: 61 LAELDTAETLLIHLGMSGRMTVSGDPLGQFVHEHPQAQKHDHVIFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADSHKLLAVLGPEPLGNDFHEEHLIAAFRGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+R +SP RK + + + L+ I+KVL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALYRCAISPKRKAGQISETR------VASLVPVIRKVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ GE C + CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREGEACRRDGCGGTISRITQSGRSSFYCGKCQR 283 >gi|325201993|gb|ADY97447.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240149] Length = 275 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDERIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|188583716|ref|YP_001927161.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] gi|229541075|sp|B1ZGU8|FPG_METPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|179347214|gb|ACB82626.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] Length = 296 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 166/299 (55%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + L R NLRF FP F+ G + +++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARFARVTLRRPNLRFPFPERFAERLEGTTVRELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRMPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T +G EP ++ + L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFAAMGVEPLSDALDGAVLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGAPTPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|261377763|ref|ZP_05982336.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] gi|269146052|gb|EEZ72470.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] Length = 275 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVETVILRQPKLRWQVNPALGDILSGQQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +++HLGMSGS I S + K +H+H ++ T + Y+DPR Sbjct: 61 IVR-FPMGILLIHLGMSGSLRIFTPSDERIGKPGKHDHTDFVFSDGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 115 RFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R + + L+ ++ VL AI+ GGS+L+D+V Sbjct: 174 GNIYANESLFRAAVSPKRPACRVKKKECAV------LVDAVKAVLRRAIETGGSTLKDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ ++VYG+ C+ CG +I + + R TFYC CQK Sbjct: 228 DSNGKSGYFQQEYTVYGRHNLQCV-RCGGLIVKEILGQRGTFYCPNCQK 275 >gi|972980|gb|AAB01505.1| putative formamidopyrimidine-DNA glycosylase; similar to Escherichia coli fpg gene, Swiss-Prot Accession Number P05523 [Neisseria meningitidis serogroup B] gi|1586496|prf||2204218A formamidopyrimidine-DNA glycosylase Length = 275 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQK-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|325130340|gb|EGC53106.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis OX99.30304] gi|325208256|gb|ADZ03708.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NZ-05/33] Length = 280 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|254464049|ref|ZP_05077460.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] gi|206684957|gb|EDZ45439.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] Length = 283 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVKRGLAPAMEGAVILKAAVNRPDLRWPFPPAMAERLTGARVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ + ++++HLGMSG + + + +H+HV + + N R+ + Sbjct: 61 LADLDTDETLLIHLGMSGRMTVSGDPLGQFVHEHPQAEKHDHVVLDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAAADSHKLLSVLGPEPLGNDFHEDHLVAAFRGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE+L+RA +SP RK + + L+ I++VL +AI AGGSSL Sbjct: 176 IAGLGNIYVCESLFRAGISPRRKAGQIAA------HRVASLVPIIRQVLQEAIRAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F YG+ GEPC C I RI Q+GRSTFYC CQ+ Sbjct: 230 KDFRQASGELGYFQHSFDAYGREGEPCRREGCAGSIARITQSGRSTFYCVKCQR 283 >gi|167649030|ref|YP_001686693.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] gi|189044585|sp|B0T7D1|FPG_CAUSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167351460|gb|ABZ74195.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] Length = 287 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 122/297 (41%), Positives = 165/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G KI+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L+ ++++HLGM+G F I S + + +H HV + Sbjct: 61 LVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P +GPEP F+A L F+ + K LL Sbjct: 116 VVTYYDPRRFGFMDLIATDKVDRHPWFAAMGPEPLGEGFDAKTLVAAFNGRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK VAG+GNIYVCEAL RA +SP + + P L I+ VL +A++ G Sbjct: 176 DQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKRLGP------LTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+D+ DG++GYFQ+ F VY + G+PC C MI R VQAGRSTF+C CQ Sbjct: 230 GSSLKDFAATDGALGYFQHRFRVYDREGQPCPTPGCKGMIGREVQAGRSTFFCPVCQ 286 >gi|91974694|ref|YP_567353.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB5] gi|123749485|sp|Q13EN7|FPG_RHOPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91681150|gb|ABE37452.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB5] Length = 293 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 172/293 (58%), Gaps = 4/293 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPAMEGFRIARAVTNRDDLRFPLQKDFVARLTGQIVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L +L +++HLGMSGSF + A H ++ + RVI+N Sbjct: 61 LADLASGDVLLMHLGMSGSFRVVAADGAHTPGEFHHPRSEDRTHDHVVFDMSSGARVIFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM + + P L+ LGPEP N+F+A+ L K ++LK ALL+Q++V Sbjct: 121 DPRRFGFMKIFPRAAIDDEPHLKGLGPEPLGNAFDAVMLARACAGKQTSLKAALLDQRVV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRA LSP RK +L P D +L I+ VL DAI AGGSSLR Sbjct: 181 AGLGNIYVCEALWRAHLSPKRKAATLANRKNEPTDHALRLTDAIRAVLGDAIKAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 D+ G +GYFQ++F+ Y + GE C ++ CG ++R VQ GRSTF+C+ CQK Sbjct: 241 DHRQTSGELGYFQHSFAAYDREGERCRTDGCGGAVKRFVQNGRSTFWCSGCQK 293 >gi|86356012|ref|YP_467904.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CFN 42] gi|123513260|sp|Q2KDA9|FPG_RHIEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86280114|gb|ABC89177.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CFN 42] Length = 296 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 193/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVTRLELRRRDLRFPFPDALAERVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASAMPGEFHHARSKDEKHDHVVFHLEGGGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDIVGRADLSAHPFFRDLGPEPTGNELGATYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ + G PK L L+ I++V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTSGGRPKQQLDLLVASIREVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIRADGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|297184285|gb|ADI20402.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium EB080_L43F08] Length = 289 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 121/300 (40%), Positives = 184/300 (61%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKILRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQDGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN+ Y+ + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNSPYVYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + + + VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRKKIDVLVPIIR------DVLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSL+D+ +G +GYFQ++F+VYG+ G+ C S NC ++I+RIVQ+GRS+FYC CQK Sbjct: 230 AGGSSLKDHRQTNGDLGYFQHSFAVYGREGKKCNSANCSELIKRIVQSGRSSFYCAKCQK 289 >gi|308389416|gb|ADO31736.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha710] gi|325204297|gb|ADY99750.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240355] Length = 275 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|161870169|ref|YP_001599339.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] gi|161595722|gb|ABX73382.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] Length = 275 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|90420499|ref|ZP_01228406.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90335227|gb|EAS48980.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 297 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 180/297 (60%), Gaps = 8/297 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + L R +LRF P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARITHLHLARPDLRFALPERFAERVTGRRITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-------TNTKKYR 113 + E+EG+L + +HLGMSGSF IE H T L ++ + + Sbjct: 61 VAEMEGDLVLAMHLGMSGSFRIEGPEGESLPGVFHHPRSTARLHDHVRFDVTTGDGQPAA 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 VIYNDPRRFG+M L+ + +P LG EP N + L F + + LK LL+ Sbjct: 121 VIYNDPRRFGYMTLIARAEMETHPHFAGLGIEPTGNGLSGAALAPAFAGRAAPLKAVLLD 180 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+I+AG+GNIYVCEALWR++LSP R +L++ G P L L I++ + DAI AGG Sbjct: 181 QRIIAGLGNIYVCEALWRSRLSPRRAAGTLVKKGGRPSQRLDLLALNIRETIADAIAAGG 240 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRDY DGS+GYFQ++F+ Y + EPC C +IRRIVQ+GRSTF+C CQ+ Sbjct: 241 SSLRDYRQADGSLGYFQHSFAAYDREHEPCRHAGCRGVIRRIVQSGRSTFFCLVCQR 297 >gi|254805097|ref|YP_003083318.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] gi|254668639|emb|CBA06272.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] Length = 275 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC+ CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCSNCQK 275 >gi|221236758|ref|YP_002519195.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] gi|22001594|sp|Q9A259|FPG_CAUCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789431|sp|B8GVY4|FPG_CAUCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|220965931|gb|ACL97287.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] Length = 287 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 116/297 (39%), Positives = 165/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I + + +H HV + Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL Sbjct: 117 -VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 286 >gi|71737815|ref|YP_276892.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|90101310|sp|Q48CK1|FPG_PSE14 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71558368|gb|AAZ37579.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326361|gb|EFW82414.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. B076] gi|320331648|gb|EFW87586.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872371|gb|EGH06520.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 270 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|237802341|ref|ZP_04590802.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025198|gb|EGI05254.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG ++R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGLPC-KVCGTLLREIKLGQRASVYCPKCQR 270 >gi|325267966|ref|ZP_08134614.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] gi|324980569|gb|EGC16233.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] Length = 276 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + T++ + + + LR+ P S G+ + RRAKYL Sbjct: 5 MPELPEVETTLRGIAPHITHKTLSRVVIRQPKLRWPIPEDLSETLSGQTVQSCRRRAKYL 64 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE +++HLGMSGS I P K H+HV +NT + Y+DPR Sbjct: 65 LIE-WETGVLLIHLGMSGSLRIFREKQPAPDK---HDHVDFIFADNT-----LLRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + LR LGPEP F A YL + K +K L++ +V G+ Sbjct: 116 RFGAVLWLPGVAEH-HELLRHLGPEPLSEDFTAEYLHERLRGKKRAVKLMLMDNALVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R +S+ + +L+ ++++L AI GGS+LRD+V Sbjct: 175 GNIYANESLFRAGILPDRAAQSIDLAD------CKRLVLAVKQILQRAIATGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ + VYG+ GE C CG +I + V R TFYCT+CQK Sbjct: 229 DSEGKSGYFQQEYKVYGRAGE-CCKVCGGLIEKSVLGQRGTFYCTHCQK 276 >gi|254437279|ref|ZP_05050773.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] gi|198252725|gb|EDY77039.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] Length = 283 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 173/294 (58%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + ++R +LR+ FP + +A G K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPSMQGHVIMRADVNRPDLRWPFPDNMAARLTGAKVTALRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ ++I+HLGMSG + + + H+HV + N RV + Sbjct: 61 LADLDRGETLIIHLGMSGRMTVSGDPLGQFHHDHPAAAKHDHVVFHMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL +T + ++ +GPEP N+F+ YL +N+ +K ALL+Q + Sbjct: 116 NDARRFGAMDLTQTDTLDDHWLIKPIGPEPLGNTFDETYLIKALATRNTPIKTALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA+++P RK + L + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARINPTRKAKDLSKKR------VASLVPIIRDVLTEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ AF Y + G C C I RIVQ+GRSTFYC CQ+ Sbjct: 230 KDYRQADGELGYFQKAFQAYDREGHICQTPECTGSIARIVQSGRSTFYCPTCQR 283 >gi|289624665|ref|ZP_06457619.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648505|ref|ZP_06479848.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485251|ref|ZP_07003344.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160239|gb|EFI01267.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330871123|gb|EGH05832.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330891348|gb|EGH24009.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. mori str. 301020] gi|330985919|gb|EGH84022.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011779|gb|EGH91835.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRARYL------KLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|296448042|ref|ZP_06889946.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] gi|296254442|gb|EFH01565.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] Length = 290 Score = 222 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 130/295 (44%), Positives = 175/295 (59%), Gaps = 11/295 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V + + L R +LRF FP F+A G++++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVFTRSPIERVELRRADLRFPFPPGFAARLAGRRVLALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKYRVI 115 + E++G ++I+HLGMSGSF I+ + H+HV + + RV Sbjct: 61 IGEIDGGDALIMHLGMSGSFRIDAADPEGVFHRARDTKAAHDHVVLHFSGGA-----RVT 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YNDPRRFGFM LV +P LG EP L + + + LK ALL+Q+ Sbjct: 116 YNDPRRFGFMLLVPRVELAAHPLFVGLGVEPLGPELTPETLAAELAGRKAPLKAALLDQR 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYVCEAL RA LSP+R L+ G PK L L++ I++VL +AI+AGGSS Sbjct: 176 TIAGLGNIYVCEALHRAHLSPLRAAGGLVDAKGRPKRGLVDLVRAIREVLGEAIEAGGSS 235 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ DGS+GYFQ++F VY + PC C + RI Q+GRSTF+C CQK Sbjct: 236 LRDHRQTDGSLGYFQHSFRVYDREDAPCPTPGCRGQVSRIAQSGRSTFFCRDCQK 290 >gi|332559816|ref|ZP_08414138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] gi|332277528|gb|EGJ22843.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] Length = 283 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 174/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAAHLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L + +VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPARLAGSLSRAEAEGLVPLIR------EVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|91781717|ref|YP_556923.1| formamidopyrimidine-DNA glycosylase [Burkholderia xenovorans LB400] gi|122970731|sp|Q145W8|FPG_BURXL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91685671|gb|ABE28871.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia xenovorans LB400] Length = 276 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVEVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + Y DPR Sbjct: 61 LFEIDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPATAAGRVSLVRYD------LLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|218768318|ref|YP_002342830.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|9910674|sp|P57014|FPG_NEIMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121052326|emb|CAM08656.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|319410563|emb|CBY90931.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis WUE 2594] Length = 275 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + ++ +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|186475088|ref|YP_001856558.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] gi|238689441|sp|B2JCP3|FPG_BURP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|184191547|gb|ACC69512.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] Length = 276 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRRVERVDVRTPALRWPIPPGFARLLHGRLVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P +H+HV + + + + DPR Sbjct: 61 LFEIDE-GWFIVHLGMTGTLRVLR-NVPHPPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP SF+ L + + ++K ALL +IV Sbjct: 113 RFGAVLWHPRSAGDVLDHPLLADLGVEPFAPSFSGALLHRKTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTPAGRISLVRYD------LLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG I++IVQ RST+YC CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIKQIVQGQRSTYYCPTCQR 276 >gi|120556654|ref|YP_961005.1| formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] gi|166215632|sp|A1U749|FPG_MARAV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120326503|gb|ABM20818.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] Length = 270 Score = 222 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + T+ + + +LR+ P + GK I V RRAKYL Sbjct: 1 MPELPEVETTRQGIAPHCEGQTIQRVIVRNPSLRWPVPADLAEHLEGKTIRAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L S+IVHLGMSGS + H+HV + L N+ R+ +NDPR Sbjct: 61 FLHL-ETGSVIVHLGMSGSLRVITDDSPAMT----HDHVELVLGNHR-----RLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ ++P + LGPEP FN +L +K + +K+ +++ +V G+ Sbjct: 111 RFG--CWLWTTDWNRHPLISALGPEPLSEDFNGAWLFRLSRQKQTPVKSFIMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P RK + + +KL + I++ L AI GG++LRD+V Sbjct: 169 GNIYANEALFKAGIHPKRKAGRISLDR------YHKLAEAIRETLSAAILMGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF + VYGK G PC C ++ I RST YC CQ+ Sbjct: 223 NSDGKPGYFAQSLLVYGKAGAPCTE-CNTPLKEIRMNNRSTVYCPRCQR 270 >gi|294671315|ref|ZP_06736166.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306947|gb|EFE48190.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 273 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ + + LR P G+ ++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHISGKTIVRTTVRQAKLRHPVPPDLDDTLNGETVLRCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +++HLGMSGS + + A +H+HV I ++ T + Y+DPR Sbjct: 61 LVHL-PQGILLIHLGMSGSLRLFTSGNAPD--AGKHDHVEIEFSDGT-----LLRYHDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L+ L PEP N F A YL + K+ S +K+ L++ K V G+ Sbjct: 113 RFGIVSWYP-GPEETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNKTVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A ++P R + + L+ I++ L AI+ GGS+LRD+V Sbjct: 172 GNIYANESLFAAGIAPNRPAMQISRKE------AAALVHHIRETLRRAIEKGGSTLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VYG+ G+PCL CG I + V R TFYC CQ Sbjct: 226 DSEGKSGYFQQEYKVYGRQGQPCL-QCGGGIEKTVIGQRGTFYCPNCQ 272 >gi|330898971|gb|EGH30390.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 270 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGQRLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|329120805|ref|ZP_08249465.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] gi|327459677|gb|EGF06018.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] Length = 272 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N TV+ + + + LR+ P G + + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQTVSAVTIRQPKLRWQIPPALPETLHGLTVRECRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +++HLGMSGS I + K H+HV I+ N T + Y+DPR Sbjct: 61 LIR-FDTGVLLIHLGMSGSLRIWQGNAPAADK---HDHVDIAFANGT-----LLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + L+ LG EP + F A YL K+ S +K AL++ KIV G+ Sbjct: 112 RFGAILWLAGVAEH-HDLLKDLGVEPLSDDFTADYLFQALQKRGSPIKTALMDNKIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A ++P R +SL + L ++++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAIAPQRAAKSLSKTE------CAALTAAVKQILRRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ + VYG+ +PC S CG I + V R TFYC CQ+ Sbjct: 225 NSEGKSGYFQQEYKVYGRANQPC-SQCGTPIAKTVIGQRGTFYCPVCQR 272 >gi|209519647|ref|ZP_03268437.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] gi|209499933|gb|EDZ99998.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] Length = 276 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 143/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTAALRWPIPADLAKILRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + Y DPR Sbjct: 61 LFEIDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E ++P L +LG EP +F + + ++K ALL IV Sbjct: 113 RFGAVLWHPREEGDILEHPLLASLGAEPFSPAFTGALMYRLTRGRKVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AID GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYELLADAVRVTLAAAIDKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V DG GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSDGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|114769647|ref|ZP_01447257.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] gi|114549352|gb|EAU52234.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] Length = 289 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 123/300 (41%), Positives = 184/300 (61%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKIVRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQGGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN YL + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNTPYLYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + L+ I+ VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRKKIDV------LVPFIRDVLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD+ +G +GYFQ++F+VYG+ G+ C S C ++I+RI+Q+GRS+FYC+ CQK Sbjct: 230 AGGSSLRDHRQANGDLGYFQHSFAVYGREGKKCNSVNCSELIKRIIQSGRSSFYCSKCQK 289 >gi|296161532|ref|ZP_06844337.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] gi|295888176|gb|EFG67989.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] Length = 276 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + Y DPR Sbjct: 61 LFEIDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVRYD------LLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] Length = 279 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ T+ + + + F+A + K I + RR KYL Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTPEADQFAAELKNKTIETIRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + LS++ HL M G + + H+HV L + + + YND R Sbjct: 61 IFDFSNQLSMVSHLRMEGKYAVVDRDQPYNK----HDHVIFELDDGQD-----LRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L T + Q L+T+GPEP + YLT + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMVLTPTGQEMQVGGLKTIGPEPTPETLTLDYLTKALRSRKRVMKSFLLDQSLIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P R++ SL + L + I L +AI A G+++ Y+ Sbjct: 172 GNIYADEVLWLSKIHPQRRSNSLTDAE------IKLLRESIFAELNEAIAAKGTTVFSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VY + G PC C I +I A RST +C +CQ Sbjct: 226 DATGHAGSFQNQLHVYHRQGLPC-PRCQTPIEQIKVAQRSTHFCPHCQ 272 >gi|221640838|ref|YP_002527100.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] gi|254789449|sp|B9KQJ9|FPG_RHOSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221161619|gb|ACM02599.1| Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] Length = 283 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L + +VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAESEGLVPLIR------EVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|227510536|ref|ZP_03940585.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190188|gb|EEI70255.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 280 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIEKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E H H+ LT+ ++ YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTPLSK----HTHIVFHLTDGR-----QLRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVAE------LKLLRKSIIDEIKKAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|66047985|ref|YP_237826.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae B728a] gi|81307826|sp|Q4ZM34|FPG_PSEU2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|63258692|gb|AAY39788.1| Formamidopyrimidine-DNA glycolase [Pseudomonas syringae pv. syringae B728a] gi|330954991|gb|EGH55251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae Cit 7] Length = 270 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|77464917|ref|YP_354421.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides 2.4.1] gi|90101315|sp|Q3IY64|FPG_RHOS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77389335|gb|ABA80520.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodobacter sphaeroides 2.4.1] Length = 283 Score = 221 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L + +VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEAEGLVPLIR------EVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|323524676|ref|YP_004226829.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] gi|323381678|gb|ADX53769.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] Length = 276 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + P +H+HV + + + + DPR Sbjct: 61 LFETDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLAHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|330970964|gb|EGH71030.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL +I+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRARYL------KLAIQIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|126460786|ref|YP_001041900.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] gi|166198739|sp|A3PFL2|FPG_RHOS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126102450|gb|ABN75128.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] Length = 283 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHGHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L + +VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEAEGLVPLIR------EVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|259417901|ref|ZP_05741820.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] gi|259346807|gb|EEW58621.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] Length = 283 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ +T ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGEVITRADVNRPDLRWPFPDRMADRLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHAHPQIAKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLDTATADSHKLLAVLGPEPLGNDFHENHLVTAFKGRKTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA +SP R+ + + L+ I++VL+DAI AGGSSL Sbjct: 176 IAGLGNIYVCETLFRAGISPRREVGKISAPR------VAALVPIIRQVLLDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCGGTVTRITQSGRSSFYCGKCQR 283 >gi|300714652|ref|YP_003739455.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] gi|299060488|emb|CAX57595.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] Length = 269 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNDRLRWPVSLEIQS-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LIEL-PHGWIIIHLGMSGSLRV----LPEELPPAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP ++F+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CTDLAASNVLAHLGPEPLHDAFSAEYLFDKSRNKRTPVKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L Q+ L++ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGIHPDRPAMTLTQDE------AALLVKTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I+ A RSTFYC CQK Sbjct: 222 QTDGKPGYFAQELQVYGRAGEPC-RVCATPIKSAKHAQRSTFYCPTCQK 269 >gi|138896290|ref|YP_001126743.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermodenitrificans NG80-2] gi|196249911|ref|ZP_03148606.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] gi|134267803|gb|ABO67998.1| Formamidopyrimidine-DNA glycosidase [Geobacillus thermodenitrificans NG80-2] gi|196210425|gb|EDY05189.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] Length = 274 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ TV D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTVGDVQIFWPNIIRHPQDPEAFAARLVGQTVRGIDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++ HL M G + + H HV T+++ + Y D Sbjct: 61 FLKF-LFDQDMLVSHLRMEGRYTVADA----HEPLDPHTHVVFRFTDDS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEGDRQPPLDQLGPEPLSPAFSPAVLAERAAKTKRTVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +++ + +AI GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPERQAASLTDEE------IKRLHEQMVATIGEAIMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC +CQ+ Sbjct: 225 YVNTQGETGTFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPHCQR 274 >gi|197106888|ref|YP_002132265.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] gi|229541078|sp|B4RC43|FPG_PHEZH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|196480308|gb|ACG79836.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] Length = 287 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 123/298 (41%), Positives = 170/298 (57%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V++ + + R +LRF P F G I+ + RRAKYL Sbjct: 1 MPELPEVETVRGGLAPVLEGRRLVRVEARRPDLRFPLPPGFVQILTGSTIVKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGMSG F I H + +P+H HV Sbjct: 61 LGRLDREDTLVMHLGMSGRFEIAHPEGEERPGRFHYAPDPDPKHAHVVFETEAG-----V 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+ Y DPRRFG+M LV T+ +P LGPEP + F+A +L F + K LL Sbjct: 116 RITYYDPRRFGYMSLVNTATLDLHPWFAGLGPEPLSDDFDAAHLKAAFTGRRQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYVCEAL RA++SP + + + + L+ I+ VL +AI AG Sbjct: 176 DQRIVAGLGNIYVCEALNRARISPFKPAGRISRPR------IEVLVAAIKDVLREAIAAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ++F Y + G+PC ++ C +I R VQAGRSTFYC CQ+ Sbjct: 230 GSTLRDYAQADGALGYFQHSFRTYDREGQPCRNDGCRGVIGREVQAGRSTFYCPVCQR 287 >gi|146278626|ref|YP_001168785.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] gi|166198740|sp|A4WVR6|FPG_RHOS5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145556867|gb|ABP71480.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] Length = 283 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M +++ ++R +LR+ P + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARVNRPDLRWPLPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ +H+HV + + RV + Sbjct: 61 LADLSGGESLLIHLGMSGRMLVSGARVGDFVHDHPAPARHDHVVLEMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L +LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVPTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P+R SL + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAAG------LVPIIREVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G+PC+ C ++ RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGQPCVTPGCRGLVGRIVQSGRSSFHCPECQR 283 >gi|75674239|ref|YP_316660.1| formamidopyrimidine-DNA glycolase [Nitrobacter winogradskyi Nb-255] gi|90101307|sp|Q3SWN3|FPG_NITWN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74419109|gb|ABA03308.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 123/292 (42%), Positives = 173/292 (59%), Gaps = 4/292 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQAVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN---TNTKKYRVIYN 117 L +L +++HLGMSGSF + + + + ++ T + + +++N Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGVTVPGDFHRPRGEDRVHDHVRFTMSSRAEIVFN 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG+M +V S P L+ LGPEP N F+A L H + ++LK ALL+Q++V Sbjct: 121 DPRRFGYMKIVARSALGDEPLLKGLGPEPLGNEFDAAVLAHGCRNRKTSLKAALLDQRVV 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL+RA+LSP R +L G P + +L+ I+ VL AI+AGGSSLR Sbjct: 181 AGLGNIYVCEALFRARLSPRRLAATLAMKTGAPSERAERLVGAIRDVLNQAIEAGGSSLR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ G +GYFQ++F VY + G+ C C ++R Q GRSTF+C CQ Sbjct: 241 DHRQTTGELGYFQHSFQVYDREGDKCRTPACKGAVKRFTQNGRSTFWCPVCQ 292 >gi|220926795|ref|YP_002502097.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] gi|254789443|sp|B8IIZ9|FPG_METNO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219951402|gb|ACL61794.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] Length = 297 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGACFSHVHLARPDLRFPLPERFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----------NPQHNHVTISLTNNTNTK 110 + +L ++I+HLGMSG F + + +H+HV+ +L+N Sbjct: 61 VADLSSGEALIMHLGMSGRFDVVLPDGRQVSPGDFYLEGAGARAKHDHVSFALSNGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV YND RRFGFMDLV + +G EP N + + F + + LK A Sbjct: 118 --RVTYNDVRRFGFMDLVPAAELATCRHFAGMGIEPLGNELSGEAVARLFRGRRTPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P +L G P L + I+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRARLHPETPAGALADAAGRPTKAARLLAEVIRDVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDYVH DG+ G FQ+AF VY + G C + C ++RR+VQ+GRSTF+C CQ Sbjct: 236 AGGSTLRDYVHTDGTKGAFQHAFRVYDREGLACTARGCRGVVRRVVQSGRSTFFCEVCQ 294 >gi|86139420|ref|ZP_01057989.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] gi|85823923|gb|EAQ44129.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] Length = 283 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIAQAHVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L EL+ +++VHLGMSG + + + + H+HV + N RV + Sbjct: 61 LAELDRGETLLVHLGMSGRMTVSGDPLGQFVHDHPQAEKHDHVVFDMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ ++ L+ LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLIETAGLAEHKLLKVLGPEPLGNDFHEDHLIAAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA++ P RK L + L+ I++VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAQILPTRKAGQLSARR------VASLVPIIRQVLEDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ E C CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREAEACRRQGCGGTIARITQSGRSSFYCGKCQR 283 >gi|295675408|ref|YP_003603932.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] gi|295435251|gb|ADG14421.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] Length = 276 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTATLRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + Y DPR Sbjct: 61 LFEIDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E ++P L +LG EP +F+ + + ++K ALL IV Sbjct: 113 RFGAVLWHPREEGDILEHPLLASLGVEPFSPAFSGAQMHRLTRGRKVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AID GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYELLADAVRVTLAAAIDKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|294679048|ref|YP_003579663.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] gi|294477868|gb|ADE87256.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] Length = 281 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 114/293 (38%), Positives = 163/293 (55%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGRVIDRAEVNRPDLRWPLPEAMAERLTGARVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG ++ +H+HV + + RV + Sbjct: 61 LADLSTGESLLIHLGMSGRMLVSGVMLGDFHLDHPAAQKHDHVVLHMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T + + L LGPEP N FN YL + S +K ALL+Q + Sbjct: 116 NDARRFGAMDLVRTDREAAHWLLAGLGPEPFGNDFNEAYLIDALKSRKSPIKTALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E L+RA + P R + L + +VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVSEVLFRAGIDPRRAANRIAAARLAGLVPLIR------EVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VY + +PC C I+RIVQ+GRS+++C CQK Sbjct: 230 RDHRQADGELGYFQHSFRVYDREDDPC-PACATPIKRIVQSGRSSYFCPACQK 281 >gi|89056701|ref|YP_512152.1| formamidopyrimidine-DNA glycosylase [Jannaschia sp. CCS1] gi|122497359|sp|Q28JI5|FPG_JANSC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|88866250|gb|ABD57127.1| DNA-(apurinic or apyrimidinic site) lyase [Jannaschia sp. CCS1] Length = 283 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ + ++R +LR+ FP + + G + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVLEGARIAQAAVNRPDLRWPFPDNMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG I H+HV + R+ + Sbjct: 61 LADLDTGETLLIHLGMSGRMQISGDVIGSFHHTHPAAAKHDHVVLDTDAGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL++T+ + Q+ LR LGPEP N+FN +L F K S +K ALL+Q+I Sbjct: 116 NDARRFGAMDLMDTATQDQHWLLRDLGPEPLGNAFNEAHLVAAFKGKRSPVKTALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEALWRA +SP+R+ + + L+ I+ VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALWRAGISPLRQAGKIAAVR------VATLVPIIRDVLTEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ+ F VYG+ G+ C +C + I R VQ+GRS+FYC CQ+ Sbjct: 230 RDHRQATGELGYFQHTFRVYGREGQRCQTPDCAEKILRKVQSGRSSFYCPACQR 283 >gi|227524688|ref|ZP_03954737.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] gi|227088172|gb|EEI23484.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] Length = 280 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E H H+ LT+ ++ YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTPLSK----HTHIVFHLTDGR-----QLRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVVE------LKLLRKSIIDEIKRAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|304319873|ref|YP_003853516.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] gi|303298776|gb|ADM08375.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] Length = 286 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 130/294 (44%), Positives = 169/294 (57%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + L R +LRF FP+ FS G +I+ V RR KYL Sbjct: 1 MPELPEVETVRRGLAPSMAGAMIERVELRRPDLRFPFPNGFSQRLEGNRILSVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKYRVI 115 + L ++I+HLGMSG F++ + H HV +L + + V Sbjct: 61 TLPLSTGETLIMHLGMSGRFLVSGERAPGRFYHASAGDVAHTHVRFTLQIPAEGRGH-VA 119 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFGFMDLV + +GPEP +F +L + + + LK+ LL+Q Sbjct: 120 YADPRRFGFMDLVASGELATCRHFAQMGPEPLSEAFTPDHLVAEARGRRTPLKSFLLDQS 179 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAG+GNIYVCEALWRA+LSP R SL T +L+ IQ L DAI+AGGS+ Sbjct: 180 TVAGLGNIYVCEALWRARLSPRRLAASLGPKRAT------RLVAAIQDALEDAIEAGGST 233 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG++GYFQ+ F VY + GEPC CG+ I R Q+GRSTF CT CQ+ Sbjct: 234 LRDYHAADGAMGYFQHRFDVYDREGEPC-RQCGRSISRFAQSGRSTFSCTTCQR 286 >gi|59801038|ref|YP_207750.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|239999153|ref|ZP_04719077.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|240013939|ref|ZP_04720852.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI18] gi|240080500|ref|ZP_04725043.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|240113132|ref|ZP_04727622.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|240115888|ref|ZP_04729950.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|240118186|ref|ZP_04732248.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|240121508|ref|ZP_04734470.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID24-1] gi|240123734|ref|ZP_04736690.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|240125925|ref|ZP_04738811.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|240128437|ref|ZP_04741098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|254493927|ref|ZP_05107098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|260440297|ref|ZP_05794113.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|268594986|ref|ZP_06129153.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268596634|ref|ZP_06130801.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268599214|ref|ZP_06133381.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268601561|ref|ZP_06135728.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268603900|ref|ZP_06138067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268682363|ref|ZP_06149225.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268684521|ref|ZP_06151383.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268686831|ref|ZP_06153693.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|75507393|sp|Q5F8Z9|FPG_NEIG1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59717933|gb|AAW89338.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|226512967|gb|EEH62312.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|268548375|gb|EEZ43793.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268550422|gb|EEZ45441.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268583345|gb|EEZ48021.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268585692|gb|EEZ50368.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268588031|gb|EEZ52707.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268622647|gb|EEZ55047.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268624805|gb|EEZ57205.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268627115|gb|EEZ59515.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] Length = 275 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKECAV------LVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|295691491|ref|YP_003595184.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] gi|295433394|gb|ADG12566.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] Length = 287 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 117/297 (39%), Positives = 164/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRVTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I + + +H HV Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFETEAGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P T+GPEP +F+ L F + K LL Sbjct: 117 -VTYYDPRRFGFMDLIPTDRVDRHPWFATMGPEPLGEAFDTRTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL RA +SP + ++ + P L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRAHISPFKPAGAVARKRLGP------LTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPGCKGIIAREVQAGRSTFFCPVCQ 286 >gi|187922596|ref|YP_001894238.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] gi|238689469|sp|B2SXG9|FPG_BURPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187713790|gb|ACD15014.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] Length = 276 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+H+ + + Y DPR Sbjct: 61 LFEIDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHIDWIFDE------FILRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E ++P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYELLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|227513545|ref|ZP_03943594.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] gi|227083418|gb|EEI18730.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] Length = 280 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E H H+ LT+ ++ YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTPLSK----HTHIVFHLTDGR-----QLRYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRINLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVVE------LKLLRKSIIDEIKRAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|226939249|ref|YP_002794320.1| Fpg [Laribacter hongkongensis HLHK9] gi|254789441|sp|C1DBB4|FPG_LARHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226714173|gb|ACO73311.1| Fpg [Laribacter hongkongensis HLHK9] Length = 272 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + + LR+ SA G ++ V RRAKYL Sbjct: 1 MPELPEVETVRAGLTPHLTGRQIKAVTVREPRLRWPVDPDLSAKLAGLEVRTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +IVHLGMSGS + +H+H+ L + + V Y+DPR Sbjct: 61 LIGFGHEQWLIVHLGMSGSVRVLPDDTP----PQKHDHLDFILDDG-----HLVRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L LGPEP + F+A L H + LK AL++ +V G+ Sbjct: 112 RFGAVLWH-LGPPDSHPLLSRLGPEPLSDGFDATGLLHALAGRRQALKVALMDNAVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A L P R SL + L+Q ++ L AI AGGS+LRD+ Sbjct: 171 GNIYANESLFEAGLDPRRPALSLTADEAGQ------LVQSVRHTLARAIAAGGSTLRDFR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ ++VYG+ G+ C CG ++ R RSTF+C CQ+ Sbjct: 225 DAIGKPGYFQQDYAVYGRQGQSC-PRCGGLVERCRLGQRSTFFCPACQR 272 >gi|330965061|gb|EGH65321.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 219 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++II VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIIQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPHNHELLIRLGPEPLTDLFDGERLYQRSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|307821985|ref|ZP_07652217.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] gi|307736551|gb|EFO07396.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] Length = 271 Score = 219 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + + LR+ P S G I VSRRAKYL Sbjct: 1 MPELPEVETTCRGIAPHIEGQIIKQVIIRQPKLRWPVPETLSQTLTGLSIQSVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++++HLGMSGS I T +H+H+ + T + +NDPR Sbjct: 61 LF-STTSGTVLLHLGMSGSLRIMSTD----QTVGKHDHIDFIFNDGTI-----LRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T ++ L+ LGPEP FN L + +K+ +++ IV G+ Sbjct: 111 RFGAVLW-TTEPAAEHQLLKNLGPEPLLPDFNGELLYSLSRNRTIAVKSFIMDSHIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + KL + I+ VL AI GG++LRD+V Sbjct: 170 GNIYANEALFMAGIQPTRQAGKVSLAR------YQKLAECIRVVLQQAIQQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ VYG+ G PC+ C Q + I A RST +C CQ+ Sbjct: 224 NEVGKPGYFQQQLKVYGRAGLPCV-GCNQPLTEIRIANRSTVFCPNCQR 271 >gi|329891039|ref|ZP_08269382.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] gi|328846340|gb|EGF95904.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 219 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 122/292 (41%), Positives = 171/292 (58%), Gaps = 9/292 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T +R +LRF FP F G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLEGARLTAPRQNRPDLRFPFPERFIERLEGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH--TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L L + + HLGM+G F +E + H +SLT + + R+ Y D Sbjct: 61 LFPLSTGETWVTHLGMTGRFTLEGVAPGVFETDAPVIGKHEHMSLTADRDGALTRLGYAD 120 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFGFM L+ T + LGPEP N+F+ +L F K N+K +LL+Q IVA Sbjct: 121 ARRFGFMGLIPTEAVEGHAWFAKLGPEPLGNAFSGAHLAEAFAGKAQNIKVSLLDQSIVA 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYVCEAL+RA++SP+ + + L +L E++ VL DAI AGGS+L+D Sbjct: 181 GLGNIYVCEALYRARISPLTAAGEISRPR------LERLAAEVRNVLGDAIAAGGSTLKD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 + +++G GYFQ+ F VYG+ EPC + C +++RI Q GRSTF+C CQK Sbjct: 235 FANVEGGQGYFQHRFDVYGREHEPCRTEGCRGVVKRIAQGGRSTFFCPLCQK 286 >gi|28378223|ref|NP_785115.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257325|sp|Q88WV4|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28271058|emb|CAD63963.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 274 Score = 219 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNVVPRGEDQ----GKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL + + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLTTDE------IATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|170691500|ref|ZP_02882665.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] gi|170143705|gb|EDT11868.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] Length = 276 Score = 219 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFETDA-GWFIVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIRQIVQGQRSTYFCPTCQR 276 >gi|213967812|ref|ZP_03395959.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] gi|301382449|ref|ZP_07230867.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato Max13] gi|302061159|ref|ZP_07252700.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato K40] gi|302132048|ref|ZP_07258038.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927588|gb|EEB61136.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 219 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + A H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLAALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|221206856|ref|ZP_03579868.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] gi|221173511|gb|EEE05946.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] Length = 300 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 26 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 85 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 86 LFEVDA-GWFIVHLGMTGTLRVLPAGGVPV--AAKHDHIDWIFDE------FVLRFRDPR 136 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 137 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 196 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 197 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 250 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 251 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 300 >gi|163797306|ref|ZP_02191259.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] gi|159177397|gb|EDP61953.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] Length = 276 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 15/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LR+ P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVMRGLTPRLEGRILAHVEARRPDLRWPLPDGFAGRLMGRRVIGLRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ ++HLGMSG ++ + K H+HV + + + +ND R Sbjct: 61 LVDLDDGTCWMIHLGMSGRMLLSNDGDPAFQK---HDHVVLRTDEG-----WWLRFNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T+ + L +GPEP N+F+A L + + +K ALL+Q++VAGI Sbjct: 113 RFGMMDLWPTADVENHRLLSGIGPEPLGNAFSASALETALEGRQTTIKAALLDQRVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL R+ ++P R ++ L+ I VL DAI AGGSSLRD+ Sbjct: 173 GNIYACEALHRSGIAPKRLALNVRGAR------AEALVSAIGAVLTDAIAAGGSSLRDHR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ+AF VY + G+ C C ++RIVQ GRSTFYC CQ+ Sbjct: 227 QTSGELGYFQHAFGVYDREGQSCPKEGCQGTVQRIVQTGRSTFYCPSCQR 276 >gi|254243455|ref|ZP_04936777.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] gi|126196833|gb|EAZ60896.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] Length = 270 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++I HLGMSGS + + H HV I L + + Y DPR Sbjct: 61 LL-GAESGTLISHLGMSGSLRLVESGTPASR----HEHVDIELASG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSISKARYL------RLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] Length = 274 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNVVPRGEDQ----GKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEESTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL + + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLTTDE------IATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|87198620|ref|YP_495877.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] gi|123490611|sp|Q2GAT0|FPG_NOVAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|87134301|gb|ABD25043.1| DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] Length = 270 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 165/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + + ++R +LR FP + A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLATVLDGQVIRRVAVNRADLRRPFPEDLAQALTGARVTGMGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++ HLGMSG + I+ K H+H+ + + ND R Sbjct: 61 LIHTDRERTMVFHLGMSGRWRIDPEDIGK------HDHLVLETGEGR-----VLSLNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+T ++PP LGPEP A +L F + + +K LL+Q+IVAG+ Sbjct: 110 RFGSVDLVDTGRLEEWPPFAALGPEPLGPGLKARHLAKAFEGRIAAVKLLLLDQQIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA++ P R+ + L L+ I+ VL ++I AGGS+LRDY Sbjct: 170 GNIYVCEALYRARIHPEREGGKVSAR------ALGLLVPAIRAVLEESIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +++RIVQ GRSTF+C CQK Sbjct: 224 RPDGELGYFAKDWRVYGREGEPC--QCGGVVKRIVQGGRSTFFCPRCQK 270 >gi|330874684|gb|EGH08833.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|15595554|ref|NP_249048.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|107099341|ref|ZP_01363259.1| hypothetical protein PaerPA_01000353 [Pseudomonas aeruginosa PACS2] gi|116054085|ref|YP_788528.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889098|ref|YP_002437962.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] gi|254237407|ref|ZP_04930730.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|296386853|ref|ZP_06876352.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAb1] gi|21362549|sp|Q9L7T2|FPG_PSEAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122261774|sp|Q02U58|FPG_PSEAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706485|sp|B7V2S0|FPG_PSEA8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9946207|gb|AAG03746.1|AE004473_8 formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|7229496|gb|AAF42853.1| mismatch repair protein MutM [Pseudomonas aeruginosa PAO1] gi|115589306|gb|ABJ15321.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169338|gb|EAZ54849.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|218769321|emb|CAW25081.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] Length = 270 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I HLGMSGS + + H HV I L + + Y DPR Sbjct: 61 LL-GAEAGTLISHLGMSGSLRLVESGTPASR----HEHVDIELASG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSISKARYL------RLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|78049946|ref|YP_366121.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038376|emb|CAJ26121.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 276 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 6 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 66 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQNGR-----VLRFNDPR 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 117 RFG--CLLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 175 GNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRDFI 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 229 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 276 >gi|114571613|ref|YP_758293.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] gi|114342075|gb|ABI67355.1| DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] Length = 287 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 123/298 (41%), Positives = 179/298 (60%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ ++ + + ++R NLR+ FP F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLVPALEGRRILAVDVNRPNLRYPFPERFAARLAGRRVEAIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK--------NPQHNHVTISLTNNTNTKKY 112 L L+ ++I HLGMSG F IE NP+H+HV Sbjct: 61 LFRLDSGETMIGHLGMSGRFSIEVEGEVAQPGDFVHAAPANPKHDHVVFRAEGG-----V 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V YNDPRRFG+M+L T+ + + L LGPEP N F+ YL + + +K ALL Sbjct: 116 VVRYNDPRRFGYMELFPTADEASHKTLGALGPEPHGNEFSGAYLGEVLAGRRTPIKTALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q IVAG+GNIYVCEAL R+ +SP R + S+ +L ++++ V+++AI+AG Sbjct: 176 DQSIVAGLGNIYVCEALHRSGISPRRVSASIPGAR------AERLARDVRDVIVEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ DG++GYFQ+ F VY + G PC C I+R+VQ+GRST++C+ CQ+ Sbjct: 230 GSSLKDFASTDGALGYFQHGFRVYDRLGAPCPTPGCVGEIQRLVQSGRSTWFCSSCQR 287 >gi|73540052|ref|YP_294572.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] gi|90101314|sp|Q476F5|FPG_RALEJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72117465|gb|AAZ59728.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] Length = 284 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 154/295 (52%), Gaps = 19/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVTVRHRGLRWPVEDDLEARLAGRLVRRIERRGKYL 60 Query: 61 LIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+E ++VHLGM+G+ + + H+H+ + L + + + Sbjct: 61 LLECVDEATDDAGWLLVHLGMTGTLRVLPDAPP----AGAHDHLDLVLDD-AGGSRIVLR 115 Query: 116 YNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + S +P LR LG EP D+ F+ +L +++ +K LL Sbjct: 116 FRDPRRFGAVLWSPLSEAMLPGHPLLRGLGIEPFDSHFDGSWLHRHTRGRSAAIKTVLLA 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 IV G+GNIY E+L+RA + P L +L Q +++ L AI+ GG Sbjct: 176 GNIVVGVGNIYASESLFRAGIRPTTPAGRLSLAR------CERLAQSVRETLAQAIERGG 229 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+LRD+V DG+ GYFQ VY + GEPC CG +R+IVQ RSTFYCT+CQ Sbjct: 230 STLRDFVGSDGASGYFQLECFVYDRAGEPC-KVCGTPVRQIVQGQRSTFYCTHCQ 283 >gi|221199989|ref|ZP_03573032.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] gi|221180228|gb|EEE12632.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] Length = 305 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 91 LFEVDA-GWFIVHLGMTGTLRVLPAGGVPV--AAKHDHIDWIFDE------FVLRFRDPR 141 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|119387217|ref|YP_918272.1| formamidopyrimidine-DNA glycosylase [Paracoccus denitrificans PD1222] gi|166215642|sp|A1BAN2|FPG_PARDP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119377812|gb|ABL72576.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccus denitrificans PD1222] Length = 281 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + R +LR+ P G +++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLQPHLEGRVIARAEARRPDLRWPLPPDLVQVLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L ELE S+++HLGMSG +IE S ++ P+H+HV + T R+ + Sbjct: 61 LAELEDRGSLLLHLGMSGRMLIEGESQGDFHRDPAILPRHDHVVLWNDQGT-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG +DLV + +P L LGPEP ++F A L F + +K ALL+Q+I Sbjct: 116 NDARRFGMVDLVPPGAE--HPLLAHLGPEPLSDAFTAEALAAAFAGRRMPVKAALLDQRI 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV EAL+RA + P R ++ + L+ ++ VL +AI AGGSSL Sbjct: 174 VAGLGNIYVSEALYRAGIDPRRLAGAVTAPE------VAALVGHVRAVLEEAIAAGGSSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ++F VYG+ G PC C ++RIVQ+GRS+F+C CQ+ Sbjct: 228 RDHRQATGELGYFQHSFRVYGREGAPCPTPGCTGTVQRIVQSGRSSFFCPLCQQ 281 >gi|152986116|ref|YP_001345845.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] gi|166198731|sp|A6UYG0|FPG_PSEA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150961274|gb|ABR83299.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] Length = 270 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I HLGMSGS + + H HV I L + + Y DPR Sbjct: 61 LL-GAEAGTLISHLGMSGSLRLVESGTPASR----HEHVDIELASG-----MSLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSISKARYL------RLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|302188125|ref|ZP_07264798.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + FN L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFNGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|254522802|ref|ZP_05134857.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] gi|219720393|gb|EED38918.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] Length = 270 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDT-AIGSAVLHLGMSGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFGSLLWQPAGE--THPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|313112028|ref|ZP_07797813.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] gi|310884315|gb|EFQ42909.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] Length = 270 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I HLGMSGS + + H HV I L + + Y DPR Sbjct: 61 LL-GAEAGTLISHLGMSGSLRLVESGTPASR----HEHVDIELVSG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSISKARYL------RLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|298368684|ref|ZP_06980002.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] gi|298282687|gb|EFI24174.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] Length = 275 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + V+ + L + LR+ +G + + SRRAKYL Sbjct: 1 MPELPEVETTLRGVGPHITGKAVSGVILRQSKLRWPVNPDLPQILQGLLVEECSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + +++HLGMSGS + + K +H+H+ I ++ T + Y+DPR Sbjct: 61 IIRFQT-GVLLIHLGMSGSLRVFTMGDDRIGKPDKHDHIDIEFSDGT-----VLRYHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E +Y +P L LGPEP + F+A YL + +K L++ +V G+ Sbjct: 115 KFGAFLWFEGIAEY-HPLLAKLGPEPLSDEFDADYLYRKMKVLKRTVKLVLMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R L + T L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGIVPHRPAYMLSRQECTT------LVETVKTVLKRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ G+PC+ CG+ I + V R TFYC++CQK Sbjct: 228 NSDGQSGYFQQEYAVYGRQGKPCVK-CGRPILKEVLGQRGTFYCSHCQK 275 >gi|28867644|ref|NP_790263.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|37999398|sp|Q88AH6|FPG_PSESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28850879|gb|AAO53958.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|331014957|gb|EGH95013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + A H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLAALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREARGISRARYL------KLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|16127937|ref|NP_422501.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] gi|13425473|gb|AAK25669.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] Length = 315 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 115/296 (38%), Positives = 164/296 (55%), Gaps = 20/296 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+L Sbjct: 30 PELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYIL 89 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ ++++HLGM+G F I + + +H HV + Sbjct: 90 APLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT----- 144 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL+ Sbjct: 145 VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLLD 204 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ GG Sbjct: 205 QRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVGG 258 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 S+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 259 STLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 314 >gi|190572171|ref|YP_001970016.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia K279a] gi|229621835|sp|B2FU49|FPG_STRMK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190010093|emb|CAQ43701.1| putative formamidopyrimidine-dna glycosylase (fapy-dna glycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) [Stenotrophomonas maltophilia K279a] Length = 270 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDT-AIGSAVLHLGMSGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFGSLLWQPAGEV--HPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|99082869|ref|YP_615023.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. TM1040] gi|123077367|sp|Q1GC55|FPG_SILST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|99039149|gb|ABF65761.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Ruegeria sp. TM1040] Length = 283 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIARADVNRPDLRWPFPDRMTERLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + + H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHSHPQLEKHDHVVFHMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAKADSHKLLAVLGPEPLGNDFHESHLVSAFKGRRTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP R+ + + T + + +VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPRREAGKISTSRVTSLVPIIR------QVLQDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCTGTVTRITQSGRSSFYCGKCQR 283 >gi|167561491|ref|ZP_02354407.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis EO147] gi|167568721|ref|ZP_02361595.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis C6786] Length = 276 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R +++++V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVKRVDVRTAMLRWPVPAGFAELLRAREVLNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L +LG EP +F L + + ++K ALL+ IV Sbjct: 113 RFGAVLWHPRDAGDVQAHPLLASLGVEPFSPAFTGALLFKRTRGRTVSVKQALLSGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------CERLAEAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ SVY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCSVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 276 >gi|221211197|ref|ZP_03584176.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] gi|221168558|gb|EEE01026.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] Length = 305 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+HV + + + DPR Sbjct: 91 LFEVDA-GWFIVHLGMTGTLRVLPAGGVPV--AAKHDHVDWIFDE------FVLRFRDPR 141 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|194098867|ref|YP_002001931.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291043590|ref|ZP_06569306.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|293398902|ref|ZP_06643067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|193934157|gb|ACF29981.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291012053|gb|EFE04042.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|291610316|gb|EFF39426.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|317164441|gb|ADV07982.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 296 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 22 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 82 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 135 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 136 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 195 GNIYANESLFRAGISPHRPANRLKKKECAV------LVETVKAVLQRAIETGGSTLRDFV 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 249 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 296 >gi|83720571|ref|YP_441036.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|167579767|ref|ZP_02372641.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis TXDOH] gi|167617843|ref|ZP_02386474.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis Bt4] gi|257140311|ref|ZP_05588573.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|123538059|sp|Q2T1B3|FPG_BURTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83654396|gb|ABC38459.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] Length = 276 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 148/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPADFAEMLRSREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWVFDE------FVLRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVRAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST+YC CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYYCPNCQR 276 >gi|114799193|ref|YP_761947.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] gi|114739367|gb|ABI77492.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] Length = 297 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 122/293 (41%), Positives = 169/293 (57%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF P F+ G +I ++R+AK+L Sbjct: 17 MPELPEVETVRRGLAPVMEGRRIVKLEQRRADLRFSLPERFAERLSGARIDRLARQAKFL 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L +++HLGM+G F I + H+HV + V Y Sbjct: 77 AAHLSTGEVLVMHLGMTGRFTIGGQMPGEFHYGAGGIAAHDHVVFHMEGGE-----TVTY 131 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM+L + YP L T+GPEP N F+ YL K + +K ALL+QK+ Sbjct: 132 NDPRRFGFMELWPAATFLAYPRLMTMGPEPLSNGFSHAYLDEALRGKAAPIKAALLDQKV 191 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+R+ +SP R +++ P +L I V+ +AI AGGSS+ Sbjct: 192 IAGLGNIYVCEALFRSGISPKRLSKT------IPGQRAARLAPAINAVIAEAIAAGGSSI 245 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG++GYFQ+ F VY + G+ C S CG I+RIVQ+GRSTFYC CQ+ Sbjct: 246 SDFAATDGALGYFQHRFDVYDREGQACKS-CGMEIKRIVQSGRSTFYCPSCQR 297 >gi|89069834|ref|ZP_01157169.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] gi|89044635|gb|EAR50751.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] Length = 283 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ ++R +LR+ FP + G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPAMEGATIARAEVNRPDLRWPFPERLAERLTGRRVLRLGRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----QHNHVTISLTNNTNTKKYRVIY 116 L+ELEG+ ++IVHLGMSG ++ + + +H+HV + + + RV + Sbjct: 61 LVELEGDETLIVHLGMSGRMVVSGDPLGQFHQEHAAAEKHDHVVLHMASGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL T + L LGPEP NSF+ YL + + + +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLWPTETLENHWLLAELGPEPLGNSFDETYLVARLRGRATPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL RA + P RK + L L+ ++ VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALHRAGIHPRRKAGRIAPAR------LAGLVPVVRAVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G PC C + RIVQ+GRS+FYC CQ+ Sbjct: 230 RDYRQADGELGYFQHTFEVYDREGHPCAKPGCAGTVARIVQSGRSSFYCPVCQR 283 >gi|115352909|ref|YP_774748.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria AMMD] gi|115282897|gb|ABI88414.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia ambifaria AMMD] Length = 284 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 70 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 120 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 121 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 181 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 235 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 284 >gi|307294070|ref|ZP_07573914.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] gi|306880221|gb|EFN11438.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] Length = 270 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 118/289 (40%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLEGAVLTRVEARRADLRFPIPVDLRQRLTGATVTALSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ + H+H+ I + NDPR Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRIDPA------EIGAHDHLLIETGGGR-----LLSLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + Y P +GPEP F L K +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRSEAWEAYSPFTRMGPEPLGPDFTPDTLAAALKGKATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R+ + + L L++ I+ VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTREAGKIGRAR------LILLVEAIRDVLAAAIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG IRR V GRSTF+C CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPCH--CGTPIRRRVDGGRSTFFCPKCQK 270 >gi|161523697|ref|YP_001578709.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189351539|ref|YP_001947167.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|238687021|sp|A9AEZ2|FPG_BURM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160341126|gb|ABX14212.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189335561|dbj|BAG44631.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] Length = 275 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPAGGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 112 RFGAVLWHSREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAID GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLAEAVRATLADAIDRGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|206559200|ref|YP_002229961.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] gi|238693090|sp|B4EAR7|FPG_BURCJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198035238|emb|CAR51112.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] Length = 275 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG IR+IVQ RST+YC CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPIRQIVQGQRSTYYCPTCQR 275 >gi|325925629|ref|ZP_08187013.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] gi|90101323|sp|Q3BM92|FPG_XANC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|325543978|gb|EGD15377.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] Length = 271 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|240016381|ref|ZP_04722921.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA6140] Length = 275 Score = 217 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQT-GILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LR +V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKECAV------LVETVKAVLQRAIETGGSTLRGFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|224823788|ref|ZP_03696897.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] gi|224604243|gb|EEG10417.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] Length = 272 Score = 217 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 159/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+TD+ + LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLTGATITDVVVREGRLRWPVPPALAATLSGLPVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +++VHLGMSGS + +H+H+ + L + + Y DPR Sbjct: 61 LLE-FASGTLLVHLGMSGSLRLVAADTP----PQKHDHIDLILDG-----RTALRYRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M +P L LGPEP ++F+A L + +++K L++ +V G+ Sbjct: 111 RFGAMLWH-IGPVEFHPLLAALGPEPLGDAFDADTLYRASRGRTTSIKQLLMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R R L + +L I+ +L AI+AGGS+LRD+V Sbjct: 170 GNIYANESLFQAGIRPGRAARRLTHAD------CERLAAAIKSILARAIEAGGSTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYFQ ++VYG+ EPC CG +IR+I Q RS++YC +CQ Sbjct: 224 GASGKPGYFQQTYAVYGRAEEPC-HTCGSLIRQIRQGQRSSYYCPHCQ 270 >gi|149184948|ref|ZP_01863265.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] gi|148831059|gb|EDL49493.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] Length = 271 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ T+T + ++R ++R FP A G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGETITRVTVNRPDMRRPFPPDLVQALTGASVTHLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++ HLGMSG + I+ K H+H+ I T +R NDPR Sbjct: 61 LIHTSRDHAMVFHLGMSGRWRIDPAEDEK------HDHLVIE------TAGHRFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ + + P LGPEP + +L + +K LL+Q IVAG+ Sbjct: 109 RFGSVDLMTSGELVTWKPFAALGPEPLGDDLTPEHLREATRGRKQAIKLLLLDQSIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A + P + + L +L+ I+ VL +I GGS+LRD+ Sbjct: 169 GNIYVCEALWHAGIHPRKAGGKVTMPQ------LRRLVPAIKDVLERSIRDGGSTLRDFA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG++GYF F VYG+ GEPC G IRRIVQ GRST++C CQ+ Sbjct: 223 QPDGNLGYFATRFHVYGREGEPCHHEDGGTIRRIVQGGRSTWFCPVCQR 271 >gi|329847536|ref|ZP_08262564.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] gi|328842599|gb|EGF92168.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] Length = 286 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 160/292 (54%), Gaps = 9/292 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + ++D+ LHR NLR+ FP F+ G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPYLDTAILSDVELHRPNLRYPFPERFADQLNGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN---HVTISLTNNTNTKKYRVIYN 117 L L+ + HLGM+G F +E + + H +S + ++ + Sbjct: 61 LFHLDIQKIWVTHLGMTGRFQVEQQALDGNYYHAVDTDSKHRHVSAIATRDGVARKLEFF 120 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM L+ + Y ++LG EP ++ + YL + +NLK L+ Q + Sbjct: 121 DPRRFGFMLLLTPAELYATSWYQSLGVEPLSDALSPAYLLDMARDRKTNLKALLMAQGGI 180 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRAKLSP R L + L I+ VL +A+ AGGSS+ Sbjct: 181 AGLGNIYVCEALWRAKLSPDRPAGKLTPKD------AEALTDAIKTVLEEAVAAGGSSIS 234 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ G +G FQ++F VY + G+PC G +I R V GRSTF+C CQ+ Sbjct: 235 DFTAATGELGLFQHSFCVYDRKGQPCRREDGGIIERKVHQGRSTFFCPKCQR 286 >gi|326386384|ref|ZP_08208007.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] gi|326209045|gb|EGD59839.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 166/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ +T + + R +LR FP A G +++ + RRAKY Sbjct: 36 MPELPEVETTVRGLATVLAGERLTRVMVRRPDLRRPFPPDLVQALTGARVVALGRRAKYG 95 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + +++ HLGMSG + I+ K H+H+ + + + ND R Sbjct: 96 LIQTDRGRTMVFHLGMSGRWRIDPGEIGK------HDHLVLE-----TARGRVLALNDAR 144 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+T+ + P LGPEP +L F + + +K LL+Q +VAG+ Sbjct: 145 RFGSVDLVDTAALDAFGPFAALGPEPLGPGLTVAHLAQAFDGRVAAVKLVLLDQGVVAGL 204 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL RA++ P R ++ + L +L+ EI+ VL +AI+AGGS+LRDY Sbjct: 205 GNIYVCEALHRARIHPERAAGAVSRA------ALSRLVLEIRAVLEEAIEAGGSTLRDYA 258 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ G+PC CG +RRIVQ GRSTF+C CQK Sbjct: 259 RPDGELGYFAKEWRVYGREGKPCG--CGGTVRRIVQGGRSTFFCPRCQK 305 >gi|56421263|ref|YP_148581.1| formamidopyrimidine-DNA glycosylase [Geobacillus kaustophilus HTA426] gi|81675729|sp|Q5KWC3|FPG_GEOKA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56381105|dbj|BAD77013.1| formamidopyrimidine-DNA glycosidase [Geobacillus kaustophilus HTA426] Length = 274 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|294625785|ref|ZP_06704403.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663922|ref|ZP_06729353.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599900|gb|EFF44019.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606307|gb|EFF49527.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 271 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL + + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQSGR-----LLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSGAQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLER------YRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|261418257|ref|YP_003251939.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|319767783|ref|YP_004133284.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] gi|261374714|gb|ACX77457.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|317112649|gb|ADU95141.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] Length = 274 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRPVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|170744299|ref|YP_001772954.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] gi|229541076|sp|B0UR68|FPG_METS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168198573|gb|ACA20520.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] Length = 297 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 168/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGARFTTVHLARPDLRFPLPARFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----------HNHVTISLTNNTNTK 110 + +L ++I+HLGMSG F + + H+HV +L+N Sbjct: 61 VADLSSGDALIMHLGMSGRFDVVFPDGRQLSPGEFYLEGAPGQAKHDHVVFALSNGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV YND RRFGFMDLV + +G EP + + + F + + LK A Sbjct: 118 --RVTYNDVRRFGFMDLVRRAELETCRHFAGMGIEPLGSDLSGEAVARLFRGRRTPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P +L G P +L Q I+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRARLHPEAAAGTLADAAGRPTRAAARLAQVIRDVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DG+ G FQ+ F VY + G C + C +RRIVQAGRSTFYC CQ Sbjct: 236 AGGSTLRDYAHTDGTQGAFQHRFRVYDREGLACTARGCRGRVRRIVQAGRSTFYCETCQ 294 >gi|291614819|ref|YP_003524976.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] gi|291584931|gb|ADE12589.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] Length = 271 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + D+ + +LR+ P + RG + D+ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHLKQRRIVDVVIRNPDLRWPIPGNLPELLRGHIVQDLQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+ ++I+HLGMSGS I+ + +H+H + + N + DPR Sbjct: 61 LI-SFGHGTLILHLGMSGSLRIQPLDTS----AEKHDHFDLVMDNGQ-----LLRLRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + Q+P L +LGPEP F+A L K+ + +K +++ +V G+ Sbjct: 111 RFGAVLWH-QGDVAQHPLLASLGPEPLLAGFDADTLYAATRKRKAAIKLVIMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P + + +L I++VL AI GGSSLRDYV Sbjct: 170 GNIYANEALFRAGIRPQLAAGKISKER------CARLTVTIKEVLRAAIRKGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ + YG+TGEPC C IR+I Q RSTFYC CQK Sbjct: 224 DSNGKQGYFQQHYFAYGRTGEPC-RVCATPIRQIRQGQRSTFYCPRCQK 271 >gi|171318636|ref|ZP_02907782.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|172061757|ref|YP_001809409.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] gi|238689132|sp|B1YN48|FPG_BURA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171096144|gb|EDT41067.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|171994274|gb|ACB65193.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] Length = 275 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHAREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|21245003|ref|NP_644585.1| formamidopyrimidine-DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] gi|24211707|sp|Q8PEQ4|FPG_XANAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21110728|gb|AAM39121.1| formamidopyrimidine DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] Length = 271 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S+++HLGMSGS + H+HV ISL + + +NDPR Sbjct: 61 LIDTDAGGSVLLHLGMSGSLRVLPGDT----LPRAHDHVDISLQSGR-----LLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSGTQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLER------YRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELFVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|170700383|ref|ZP_02891393.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] gi|170134727|gb|EDT03045.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] Length = 275 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDIRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|322835039|ref|YP_004215066.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] gi|321170240|gb|ADW75939.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] Length = 269 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LVELRT-GWIIIHLGMSGSLRV----LPEETEAGKHDHVDLVMDTG-----HVLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +S L LGPEP FNA YL + K S +K L++ K+V G+ Sbjct: 110 RFGAWLW--SSDLAASNVLAHLGPEPLSEDFNADYLFEKSRTKKSPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R SL ++ L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFVAGISPDRPAHSLKRDET------ELLVRTIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+TGEPC CG I A R+TF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRTGEPC-RACGTPIESKKHAQRTTFFCPRCQR 269 >gi|70733155|ref|YP_262928.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] gi|90101311|sp|Q4K4A5|FPG_PSEF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68347454|gb|AAY95060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] Length = 270 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQKVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVEVGLP----AAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SHDPLNHELLVRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRARYL------KLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ YC CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGENC-KVCGTGLREIKLGQRASVYCPRCQ 269 >gi|194363823|ref|YP_002026433.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] gi|238693487|sp|B4SRN0|FPG_STRM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194346627|gb|ACF49750.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] Length = 270 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 161/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDTAAGS-AVLHLGMSGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFGSLLWQPAGEV--HPLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|78067597|ref|YP_370366.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] gi|90101298|sp|Q39CU4|FPG_BURS3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77968342|gb|ABB09722.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] Length = 275 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTEMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPADGLPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC C IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCNTPIRQIVQGQRSTYFCPTCQR 275 >gi|225023717|ref|ZP_03712909.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] gi|224943599|gb|EEG24808.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] Length = 273 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 153/289 (52%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M+ TV ++ + + LR+ + I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYMQGKTVAEVVVRQPKLRWPVSPDLAQQLASSHIVYIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +++HLGMSGS + A P + H + + + DPR Sbjct: 61 LFE-FPHGVMLLHLGMSGSLRVYPNDSAPPPEKHDHIDII-------TVDQTVLRLRDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + Q+P L+ LGPEP F + YL + ++ S +K AL++ K+V G+ Sbjct: 113 RFGSVLWFT-GAAEQHPLLQHLGPEPLQEEFTSGYLKNALSRRKSAIKTALMDNKVVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + +L+ EI+ VL AI+ GGSSLRD+V Sbjct: 172 GNIYANEALFAAGILPTRRADRVSAEE------CRRLVVEIRNVLHCAIEVGGSSLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H DG GYFQ + VYG+ GEPC CG I R + RS+FYC CQ+ Sbjct: 226 HSDGQSGYFQQQYHVYGREGEPCHH-CGTPIARQIVGQRSSFYCPKCQR 273 >gi|107023731|ref|YP_622058.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia AU 1054] gi|116690818|ref|YP_836441.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] gi|122978692|sp|Q1BTH0|FPG_BURCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215614|sp|A0KAM1|FPG_BURCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|105893920|gb|ABF77085.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia cenocepacia AU 1054] gi|116648907|gb|ABK09548.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] Length = 275 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 275 >gi|58040922|ref|YP_192886.1| formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] gi|81351172|sp|Q5FN17|FPG_GLUOX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58003336|gb|AAW62230.1| Formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] Length = 277 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 162/291 (55%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + ++ + ++R +LR+ FP G ++ RRAKY+ Sbjct: 1 MPELPEVETVMRGFRDAFEGHRISHVTVNRPDLRWPFPADLREKLEGHHVLSFRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ LEG S+++HLGMSG I P H H+ + + R DPR Sbjct: 61 LVRLEGGWSMLLHLGMSGRLTIGRAGTN--ATPPAHEHLVLETDSGA-----RAGLVDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV TS + + L LG EP ++ L F + S +K+ALL+QK++AG+ Sbjct: 114 RFGMVDLVRTSEEDSHRLLAHLGMEPLSDAMTGPALAELFRGRRSPIKSALLDQKLIAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+R + P R+ +L L + I ++L AI +GGSSLRDYV Sbjct: 174 GNIYVCEALFRCGIHPERQACTLTGEET------AALAEAIPQILEQAIASGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG--QMIRRIVQAGRSTFYCTYCQK 289 DG+ G FQ+ VYG+ G PC NCG I+RI QAGRSTF+C CQK Sbjct: 228 QADGTKGAFQDLHLVYGREGVPC-PNCGAEHPIQRITQAGRSTFFCPTCQK 277 >gi|21233569|ref|NP_639486.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770535|ref|YP_245297.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] gi|24211706|sp|Q8P3C4|FPG_XANCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81303518|sp|Q4UNU6|FPG_XANC8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21115430|gb|AAM43368.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575867|gb|AAY51277.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] Length = 271 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAAQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRVLPGDTP----PRAHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + L +LGPEP +F YL + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQRDCETHELLASLGPEPLSAAFTGDYLHALACGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSRER------YRRLADAVKEILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ GE C +CG ++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELMVYGREGEAC-RHCGGELKHATIGQRATVWCAACQR 271 >gi|330818348|ref|YP_004362053.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] gi|327370741|gb|AEA62097.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] Length = 275 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 151/291 (51%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P +F+AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGHRVRRVDVRTAMLRWPVPENFAAALESREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL+ IVHLGM+G+ + A +H+H+ + + DPR Sbjct: 61 LFELDA-GWFIVHLGMTGTLRVLPGGVAPQ--AGKHDHIDWIFD------ACVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +++ L +LG EP +F A L + + ++K ALL IV Sbjct: 112 RFGAVLWHPREQGDIHEHHLLTSLGVEPFSPAFTAALLYRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|307728386|ref|YP_003905610.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] gi|307582921|gb|ADN56319.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] Length = 276 Score = 215 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRKVERVEVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + +H+HV + + + + DPR Sbjct: 61 LFETDS-GWFIVHLGMTGTLRVLRH-VPHAPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVS------LVRYGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC C IR+IVQ RST++C+ CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCATPIRQIVQGQRSTYFCSTCQR 276 >gi|94309238|ref|YP_582448.1| formamidopyrimidine-DNA glycosylase [Cupriavidus metallidurans CH34] gi|166198737|sp|Q1LRP7|FPG_RALME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|93353090|gb|ABF07179.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cupriavidus metallidurans CH34] Length = 297 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 152/307 (49%), Gaps = 30/307 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ I + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVIVRHRGLRWPVEPELEARLTGRIIGRIERRGKYL 60 Query: 61 LIELEG--------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 L+E ++VHLGM+G+ + A H+H+ + L Sbjct: 61 LLECLPPADATRAGTGEDAAPGWLLVHLGMTGTLRVYPAPPA----PGAHDHLDLLLAAG 116 Query: 107 TNTKKYR---VIYNDPRRFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 +T + + + DPRRFG + S +P L LG EP D F+ +L Sbjct: 117 PDTAEAEPVVLRFRDPRRFGAILWTPLAESDLPGHPLLSRLGIEPFDPRFDGAWLHRGMR 176 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ +K ALL +V G+GNIY E+L+RA + P + L KL + Sbjct: 177 GRSMAIKQALLAGDVVVGVGNIYCSESLFRAGIRPTTQAGRLSLAR------CEKLAVAV 230 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++ L +AI GGS+LRD+V DGS GYFQ VY + GEPC CG IR+I+Q RST Sbjct: 231 RETLAEAIARGGSTLRDFVGSDGSSGYFQLDCFVYDRAGEPC-RICGTPIRQILQGQRST 289 Query: 282 FYCTYCQ 288 FYC +CQ Sbjct: 290 FYCPHCQ 296 >gi|84501265|ref|ZP_00999470.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] gi|84390556|gb|EAQ03044.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] Length = 283 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 173/294 (58%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + ++R +LR+ FP + + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRAGLAPAMEGEVIARAQVNRPDLRWPFPENMAGRLSGRRVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG + + + H+HV + N RV + Sbjct: 61 LADLDSQETLLIHLGMSGRMTVSGDPLGRFVHEHPAAEKHDHVVFDMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L +LGPEP N+FN Y + S +K LL+QK+ Sbjct: 116 NDPRRFGAMDLMATPETEAHPLLASLGPEPLGNAFNEAYFVAAVKHRRSPIKAVLLDQKV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R+ + L L+ I+ VL AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGISPSRRADRISVTR------LATLVPIIRDVLNAAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ++F VYG+ GEPC C IRR VQ+GRS+F+C CQ+ Sbjct: 230 RDYRRADGELGYFQHSFDVYGREGEPCRTPGCSATIRRTVQSGRSSFHCPQCQR 283 >gi|271498731|ref|YP_003331756.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] gi|270342286|gb|ACZ75051.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] Length = 269 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGRTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LLEL-PTGWIIIHLGMSGSLRV----LPEYSEPDKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + F+ YL + H + + +K +++ K+V G+ Sbjct: 110 RFGAWLW--CDDLANSSVLAHLGPEPLSDDFSGDYLFSRCHGRKTPIKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q ++L+Q I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGILPERPAGSLSQQE------AHQLVQSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC CG +I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRNGKPCHH-CGTLIDSIKQGQRSTFFCKRCQR 269 >gi|170734143|ref|YP_001766090.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] gi|169817385|gb|ACA91968.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] Length = 327 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 53 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 112 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 113 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 163 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 164 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 223 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 224 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 277 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 278 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 327 >gi|331665260|ref|ZP_08366161.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] gi|331057770|gb|EGI29756.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] Length = 269 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQTVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLAWVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|254247180|ref|ZP_04940501.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] gi|124871956|gb|EAY63672.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] Length = 331 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 57 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 116 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+HV + + + DPR Sbjct: 117 LFEVDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHVDWIFDE------FVLRFRDPR 167 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 168 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 227 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 228 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 281 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 282 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 331 >gi|329296441|ref|ZP_08253777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Plautia stali symbiont] Length = 269 Score = 214 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ H A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAIVRNPRLRWPVSHEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS + +H+HV + + N + Y DPR Sbjct: 60 LLEL-PHGWIIIHLGMSGSLRVLPGELP----AAKHDHVDLVMNNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP ++FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWTT--DPEGSSVLAHLGPEPLSDAFNGGYLYEKSRGKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAMSLSEAE------AELLANTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPILSGKHGQRSTFWCPRCQ 268 >gi|238918039|ref|YP_002931553.1| formamidopyrimidine-DNA glycosylase, [Edwardsiella ictaluri 93-146] gi|259647333|sp|C5B9D8|FPG_EDWI9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238867608|gb|ACR67319.1| formamidopyrimidine-DNA glycosylase, putative [Edwardsiella ictaluri 93-146] Length = 269 Score = 214 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLT-LRDRPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL I++HLGMSGS I +H+H+ + LT+ + Y DPR Sbjct: 60 LLELPE-GWIVIHLGMSGSVRILPALTP----PQKHDHIDLLLTDG-----MMLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP +F+A YL + + + +K L++ +V G+ Sbjct: 110 RFGAWLWY--DSLATASVLAHLGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL + + L+Q I+ VL +ID GG++LRD++ Sbjct: 168 GNIYASESLFSAQIHPDRLAGSLSADE------AHLLVQTIKAVLQRSIDQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE CL+ CG I+R R+TFYC +CQ+ Sbjct: 222 QADGKPGYFAQQLQVYGRAGEACLT-CGTTIKRSKHGQRTTFYCPHCQR 269 >gi|222147314|ref|YP_002548271.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] gi|254789428|sp|B9JZF5|FPG_AGRVS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221734304|gb|ACM35267.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] Length = 297 Score = 214 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 143/298 (47%), Positives = 192/298 (64%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + L R +LRF P F+A T+G+ I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPSMEGRRLTRLELRRTDLRFPLPVDFAARTQGRLIVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 LI+L+ +SI+ HLGMSGS+ IE + ++ +H+HV L+ Sbjct: 61 LIDLDDGVSIVSHLGMSGSYRIEAANETGLPGQFHMARSRDEKHDHVIFHLS-GPEGDPL 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE ++ LGPEP N+ +A YL +F K LK ALL Sbjct: 120 RVIYNDPRRFGFMDMVERRHMDRHAAFAGLGPEPVGNALDADYLAFRFKGKAQPLKTALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GNIYVCEALWRA LSP R+L+ G P L L Q I+ V+ +AI+AG Sbjct: 180 DQKVIAGLGNIYVCEALWRAHLSPETPARALVNAEGKPVAALEDLTQAIRTVIAEAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++F+VY + GE C C + R+ QAGRSTF+C CQ+ Sbjct: 240 GSSLRDHIQADGSLGYFQHSFNVYDREGEACRTPGCTGTVERMTQAGRSTFHCPQCQR 297 >gi|289666306|ref|ZP_06487887.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 271 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRSHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLDR------YRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWCGSCQR 271 >gi|193070399|ref|ZP_03051341.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] gi|192956338|gb|EDV86799.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] Length = 269 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILRAVVRNGRLRWPVSEELY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|166709959|ref|ZP_02241166.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 271 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL H + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSDTQAHELLAALGPEPLSEAFTGDYLHALAHGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLDR------YRRLAAAVKDILSYAIRRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|134296994|ref|YP_001120729.1| formamidopyrimidine-DNA glycosylase [Burkholderia vietnamiensis G4] gi|166215619|sp|A4JHZ1|FPG_BURVG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134140151|gb|ABO55894.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia vietnamiensis G4] Length = 275 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPADLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPVAGVPV--AAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ Y + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFAYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|220933505|ref|YP_002512404.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] gi|254789453|sp|B8GUQ6|FPG_THISH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219994815|gb|ACL71417.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] Length = 271 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + VT + + LR+ P + G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIERHVTGRRVTSVIVREPRLRWPVPGDLAERLTGHTLGRVLRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE++ L +++HLGMSGS + H+H+ + L + + +DPR Sbjct: 61 LIEVDTGL-LLLHLGMSGSLRVVTPDAPLRK----HDHIDLCLDSGRC-----LRLHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +E + +P L LGPEP F+A YL K+ +K ++N +V G+ Sbjct: 111 RFGAVLWIE-GPAHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIMNSHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R L + +L++ I++VL +AI GG++LRD+V Sbjct: 170 GNIYASEALFLAGIRPGRAAGRLTRAE------CARLVETIRQVLGEAIAQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYFQ VYG+TG C++ C +++IVQ RST+YC CQ+ Sbjct: 224 REDGSHGYFQQHLRVYGRTGLACMA-CETPVKQIVQGNRSTYYCPACQR 271 >gi|257898349|ref|ZP_05678002.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] gi|257836261|gb|EEV61335.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] Length = 278 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPLFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLCPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|53718165|ref|YP_107151.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76810131|ref|YP_332171.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126441301|ref|YP_001057626.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 668] gi|126453315|ref|YP_001064872.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134279564|ref|ZP_01766276.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|167718022|ref|ZP_02401258.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei DM98] gi|167737037|ref|ZP_02409811.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 14] gi|167814146|ref|ZP_02445826.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 91] gi|167822670|ref|ZP_02454141.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 9] gi|167844242|ref|ZP_02469750.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei B7210] gi|167892753|ref|ZP_02480155.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 7894] gi|167901249|ref|ZP_02488454.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei NCTC 13177] gi|167909466|ref|ZP_02496557.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 112] gi|167917495|ref|ZP_02504586.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei BCC215] gi|217419604|ref|ZP_03451110.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242318008|ref|ZP_04817024.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254181862|ref|ZP_04888459.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|254187795|ref|ZP_04894307.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|254196842|ref|ZP_04903266.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|254258992|ref|ZP_04950046.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] gi|81690471|sp|Q63XL4|FPG_BURPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101297|sp|Q3JW82|FPG_BURP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215617|sp|A3NRA1|FPG_BURP0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215618|sp|A3N5K5|FPG_BURP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52208579|emb|CAH34515.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76579584|gb|ABA49059.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126220794|gb|ABN84300.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 668] gi|126226957|gb|ABN90497.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134248764|gb|EBA48846.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|157935475|gb|EDO91145.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|169653585|gb|EDS86278.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|184212400|gb|EDU09443.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|217396908|gb|EEC36924.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242141247|gb|EES27649.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254217681|gb|EET07065.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] Length = 276 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|163803273|ref|ZP_02197152.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] gi|159172910|gb|EDP57748.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] Length = 269 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I+++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGETIKAFVFRTPKLRWDIPQELKK-LEGQVILNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDA-GTAIVHLGMSGSLRVLDADFP----AAKHDHVDLKLSNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWSAPNESHAVLG--HMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++ + PIR L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKTHIHPIRPAGKLTMKEW------RLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG +I + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELQVYGKEGEQC-PECGTIIESVKIGQRNTFFCPQCQQ 269 >gi|46201678|ref|ZP_00208205.1| COG0266: Formamidopyrimidine-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 119/293 (40%), Positives = 159/293 (54%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVARGLAQVWDGRRFVSVETRRSGLRVPFPKDFAQRLTGRRVESVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ L ++ HLGMSG I + H+HV V DPR Sbjct: 61 VVRLDDGLVMLGHLGMSGRMTI---GALRNAPPGPHDHVEWVTDAG-----ISVTLTDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E +P L +GPEP D+SF+A L K+ +K LL+Q+ VAG+ Sbjct: 113 RFGLFTLCEAGELAAHPLLAGIGPEPLDDSFDAKVLAQALKGKSGPIKTVLLDQRTVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + +L+ I+ VL +A+ AGGS+L+D+ Sbjct: 173 GNIYVCESLFRARISPLRPAGSLTKAETG------RLVPLIKAVLTEAVAAGGSTLKDHA 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYFQ++F VYG+ GE C CG I RI QAGRSTFYC Q Sbjct: 227 RPDGELGYFQHSFQVYGREGEACPDCPGAPQCGG-ISRITQAGRSTFYCAKRQ 278 >gi|188993761|ref|YP_001905771.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. B100] gi|229621836|sp|B0RZ50|FPG_XANCB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167735521|emb|CAP53736.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris] Length = 271 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAEQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRVLPGDTP----PRAHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + L +LGPEP +F YL + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQRDCETHELLASLGPEPLSPAFTGDYLHALARGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSRER------YRRLADAVKEILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G+ C CG+ ++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELMVYGREGQACKH-CGRELKHATIGQRATVWCAACQR 271 >gi|58579922|ref|YP_198938.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424516|gb|AAW73553.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 316 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 46 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 105 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 106 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQNGR-----VLRFNDPR 156 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL + + + +K L++Q +V G+ Sbjct: 157 RFG--CLLWQSDIQAHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVVGV 214 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 215 GNIYAAESLHCAGISPLREAGKVSLDR------YRRLAAAVKDILSYAIRRGGTTLRDFI 268 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 269 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 316 >gi|323339591|ref|ZP_08079865.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] gi|323092986|gb|EFZ35584.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] Length = 276 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K T+ D+ + + F GKK++DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLIKGKTIKDVNVLYDKIIVGSKAEFCKKLSGKKLLDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L+++ HL M G + + +H HV L + + + YND R Sbjct: 61 LFRFSGELTMVSHLRMEGKYFVRQKGEP----VEKHTHVIFYLMDGS-----ELHYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L +T + + LGPEP + +F++ KK +K ALL+Q +VAG+ Sbjct: 112 KFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQTLVAGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ AK+ P+ L + L I L A + GG+++R Y Sbjct: 172 GNIYADEVLYMAKIHPLTPCNELSRKQSDC------LRNSIIDELEKASEKGGTTIRSYA 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ VYGKTGE C CG I +IV R T YC CQ Sbjct: 226 NAFLEEGSFQFFLQVYGKTGEKCG-RCGTPIEKIVVGQRGTHYCPNCQ 272 >gi|89076362|ref|ZP_01162695.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] gi|89047933|gb|EAR53524.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] Length = 269 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDV-GYAIVHLGMSGSLRVLPVGAP----VEKHDHVDLVLTSGE-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN +L + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDEFNVEHLHQKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL++EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVEEIKSVLAFAIKQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKTLSEAKIGQRATVFCSDCQK 269 >gi|291619454|ref|YP_003522196.1| MutM [Pantoea ananatis LMG 20103] gi|291154484|gb|ADD79068.1| MutM [Pantoea ananatis LMG 20103] gi|327395777|dbj|BAK13199.1| formamidopyrimidine-DNA glycosylase MutM [Pantoea ananatis AJ13355] Length = 275 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 7 MPELPEVETSRRGIEPHLVGQTILHAVVRNARLRWPVSQEILA-LSDQPVLSVQRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 66 LLEL-PHGWIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGK-----VLRYTDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +S L LGPEP +F+ YL + K + +K L++ KIV G+ Sbjct: 116 RFGAWLW--SSDLAGSSVLAHLGPEPLSEAFSGDYLFEKSRGKRTVIKQWLMDNKIVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++LRD++ Sbjct: 174 GNIYASESLFTAGIIPDRPAMSLSHED------AAILANTIKAVLLRSIEQGGTTLRDFL 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 228 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIVSGKHGQRSTYWCPNCQ 274 >gi|300939234|ref|ZP_07153914.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] gi|300455876|gb|EFK19369.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] Length = 269 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLTHLGPEPLSDDFNGEYLYQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|304399014|ref|ZP_07380883.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] gi|304353474|gb|EFM17852.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] Length = 269 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PHGWIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +S L LGPEP F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SSDLAGSSVLAHLGPEPLSEQFDGAYLFDKSRGKRTLIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGIVPDRAAGSLSQAES------ELLVNTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPIVSGRHGQRSTYWCPNCQ 268 >gi|84621927|ref|YP_449299.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188579098|ref|YP_001916027.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|90101324|sp|Q5H667|FPG_XANOR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123523504|sp|Q2P8V2|FPG_XANOM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689555|sp|B2STU3|FPG_XANOP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84365867|dbj|BAE67025.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523550|gb|ACD61495.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 271 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDT----LPRAHDHVDISLQNGR-----VLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL + + + +K L++Q +V G+ Sbjct: 112 RFG--CLLWQSDIQAHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHCAGISPLREAGKVSLDR------YRRLAAAVKDILSYAIRRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|167835381|ref|ZP_02462264.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis MSMB43] Length = 276 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVQRVDVRTAMLRWPVPAGFAELLRLREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLAAAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAAIRQIVQGQRSTYFCPNCQR 276 >gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] gi|188023541|gb|EDU61581.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] Length = 269 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTICYAIVRNSRLRWPVSEQI-KSLSDEMILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL N II+HLGMSGS I + H+HV + L + + Y DPR Sbjct: 60 LIEL-KNGWIIIHLGMSGSLRILLEELPEEK----HDHVDLVLKDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + FNA YL Q K+ +K L++ K+V G+ Sbjct: 110 RFGAWLW--CDDLETSRVLSHLGPEPLSDEFNAQYLFEQAGKRKIAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP + T +L L+Q+I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFAAGISPEKITHTLTLEQSID------LVQQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPCL CG I I Q RSTFYC CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPCL-ICGTPILSIKQGQRSTFYCPQCQK 269 >gi|257884460|ref|ZP_05664113.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257887243|ref|ZP_05666896.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|293377606|ref|ZP_06623795.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] gi|293571801|ref|ZP_06682817.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|257820298|gb|EEV47446.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257823297|gb|EEV50229.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|291608055|gb|EFF37361.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|292643606|gb|EFF61727.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] Length = 278 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSAEIHS-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRILPDDLP----PEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +T +P L LGPEP ++FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTKT--LEGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I+ VL +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSADE------CERLVRAIKTVLKRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKDEPC-RVCGTPITATKHAQRATFYCRRCQK 269 >gi|153834860|ref|ZP_01987527.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] gi|148868731|gb|EDL67808.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDE-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLSNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAVLG--HMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKEW------QLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGECQK 269 >gi|308188653|ref|YP_003932784.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] gi|308059163|gb|ADO11335.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PHGWIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +S L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SSDLTGSSVLAHLGPEPLSDQFDGTYLFDKSRGKRTLIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRAAGSLSQAE------AELLVNTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPIISGRHGQRSTYWCPNCQ 268 >gi|317050104|ref|YP_004117752.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] gi|316951721|gb|ADU71196.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 145/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHMVGETILHAVVRNSRLRWPVSSEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PGGWIIIHLGMSGSLRMLPGELP----PAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T+ L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--TNDLAGSSVLAHLGPEPLSDDFDGNYLFEKSRGKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q T L I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGIIPDRPAMSLSQAEAT------LLANTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QTDGKPGYFAQELQVYGRAGEPC-RACGTPIVSGKHGQRSTFWCPRCQ 268 >gi|16131506|ref|NP_418092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89110376|ref|AP_004156.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. W3110] gi|157163116|ref|YP_001460434.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|170083143|ref|YP_001732463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194435950|ref|ZP_03068053.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238902726|ref|YP_002928522.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|253771524|ref|YP_003034355.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163563|ref|YP_003046671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|256021361|ref|ZP_05435226.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|300923419|ref|ZP_07139460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300927935|ref|ZP_07143494.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|301325317|ref|ZP_07218824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|332282595|ref|ZP_08395008.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|120475|sp|P05523|FPG_ECOLI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988460|sp|A8A697|FPG_ECOHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229541070|sp|B1X969|FPG_ECODH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|259647332|sp|C4ZXM7|FPG_ECOBW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41481|emb|CAA29431.1| unnamed protein product [Escherichia coli] gi|466773|gb|AAB18612.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|1790066|gb|AAC76659.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|85676407|dbj|BAE77657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K12 substr. W3110] gi|157068796|gb|ABV08051.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|169890978|gb|ACB04685.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194425493|gb|EDX41477.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238861125|gb|ACR63123.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|242379159|emb|CAQ33961.1| formamidopyrimidine DNA glycosylase [Escherichia coli BL21(DE3)] gi|253322568|gb|ACT27170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975464|gb|ACT41135.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|253979620|gb|ACT45290.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BL21(DE3)] gi|260447346|gb|ACX37768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|300420329|gb|EFK03640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300464027|gb|EFK27520.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|300847844|gb|EFK75604.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|315138217|dbj|BAJ45376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|323959883|gb|EGB55531.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H489] gi|323971277|gb|EGB66522.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA007] gi|332104947|gb|EGJ08293.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|15804176|ref|NP_290215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 EDL933] gi|15833764|ref|NP_312537.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30065089|ref|NP_839260.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56480390|ref|NP_709414.2| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 301] gi|74314131|ref|YP_312550.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei Ss046] gi|82545998|ref|YP_409945.1| formamidopyrimidine-DNA glycosylase [Shigella boydii Sb227] gi|91213151|ref|YP_543137.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UTI89] gi|110807687|ref|YP_691207.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5 str. 8401] gi|117625909|ref|YP_859232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157158292|ref|YP_001465115.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|168748717|ref|ZP_02773739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|168753459|ref|ZP_02778466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|168759732|ref|ZP_02784739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|168766055|ref|ZP_02791062.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|168772399|ref|ZP_02797406.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|168779790|ref|ZP_02804797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|168785511|ref|ZP_02810518.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|170018135|ref|YP_001723089.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170684053|ref|YP_001745935.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187731323|ref|YP_001882332.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|188491930|ref|ZP_02999200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|191167823|ref|ZP_03029629.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|191170358|ref|ZP_03031911.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194430989|ref|ZP_03063282.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|195936196|ref|ZP_03081578.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4024] gi|208814029|ref|ZP_03255358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208820753|ref|ZP_03261073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209398868|ref|YP_002273113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209921106|ref|YP_002295190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SE11] gi|215488914|ref|YP_002331345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217324519|ref|ZP_03440603.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218551163|ref|YP_002384954.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218556197|ref|YP_002389110.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI1] gi|218560707|ref|YP_002393620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S88] gi|218691919|ref|YP_002400131.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ED1a] gi|218707269|ref|YP_002414788.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMN026] gi|237703405|ref|ZP_04533886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254038834|ref|ZP_04872886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|254795590|ref|YP_003080427.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|260857970|ref|YP_003231861.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260870365|ref|YP_003236767.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|261224182|ref|ZP_05938463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254793|ref|ZP_05947326.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK966] gi|291285006|ref|YP_003501824.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|293407258|ref|ZP_06651182.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|293413069|ref|ZP_06655737.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|293417096|ref|ZP_06659723.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|298383004|ref|ZP_06992599.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300815126|ref|ZP_07095351.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300822405|ref|ZP_07102545.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300898569|ref|ZP_07116900.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300907676|ref|ZP_07125304.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300919798|ref|ZP_07136273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300983558|ref|ZP_07176650.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|301303868|ref|ZP_07209987.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|306816017|ref|ZP_07450155.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|309797624|ref|ZP_07692012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|312968024|ref|ZP_07782235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|331649450|ref|ZP_08350536.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331670475|ref|ZP_08371314.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331679726|ref|ZP_08380396.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|54037117|sp|P64149|FPG_SHIFL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040771|sp|P64148|FPG_ECO57 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101316|sp|Q31UZ1|FPG_SHIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101318|sp|Q3YVZ7|FPG_SHISS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122421890|sp|Q1R4V8|FPG_ECOUT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122957052|sp|Q0SYG3|FPG_SHIF8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215623|sp|A1AHG8|FPG_ECOK1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988459|sp|A7ZTI6|FPG_ECO24 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044588|sp|B1IZF8|FPG_ECOLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706479|sp|B7MFJ6|FPG_ECO45 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706481|sp|B7M4B9|FPG_ECO8A RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706482|sp|B7NET9|FPG_ECOLU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706483|sp|B1LK72|FPG_ECOSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706484|sp|B7LVJ6|FPG_ESCF3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066643|sp|B5YWD3|FPG_ECO5E RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066644|sp|B6I3L2|FPG_ECOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691677|sp|B2TTU9|FPG_SHIB3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789436|sp|B7ULJ0|FPG_ECO27 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789438|sp|B7N2X1|FPG_ECO81 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12518391|gb|AAG58779.1|AE005591_3 formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. EDL933] gi|13363985|dbj|BAB37933.1| formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30043350|gb|AAP19071.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56383941|gb|AAN45121.2| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 301] gi|73857608|gb|AAZ90315.1| formamidopyrimidine DNA glycosylase [Shigella sonnei Ss046] gi|81247409|gb|ABB68117.1| formamidopyrimidine DNA glycosylase [Shigella boydii Sb227] gi|91074725|gb|ABE09606.1| formamidopyrimidine DNA glycosylase [Escherichia coli UTI89] gi|110617235|gb|ABF05902.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 5 str. 8401] gi|115515033|gb|ABJ03108.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157080322|gb|ABV20030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|169753063|gb|ACA75762.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170521771|gb|ACB19949.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187428315|gb|ACD07589.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|187771367|gb|EDU35211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|188016969|gb|EDU55091.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|188487129|gb|EDU62232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|189002553|gb|EDU71539.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|189358964|gb|EDU77383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|189364460|gb|EDU82879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|189369599|gb|EDU88015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|189374639|gb|EDU93055.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|190902166|gb|EDV61909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|190909166|gb|EDV68752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194420444|gb|EDX36520.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|208735306|gb|EDZ83993.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208740876|gb|EDZ88558.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209160268|gb|ACI37701.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209754668|gb|ACI75646.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754670|gb|ACI75647.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754672|gb|ACI75648.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754674|gb|ACI75649.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754676|gb|ACI75650.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209914365|dbj|BAG79439.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE11] gi|215266986|emb|CAS11431.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217320740|gb|EEC29164.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218358704|emb|CAQ91360.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218362965|emb|CAR00602.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|218367476|emb|CAR05258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218429483|emb|CAV17991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|218434366|emb|CAR15290.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|226838799|gb|EEH70826.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|226902669|gb|EEH88928.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254594990|gb|ACT74351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|257756619|dbj|BAI28121.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257766721|dbj|BAI38216.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|281180681|dbj|BAI57011.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE15] gi|281602998|gb|ADA75982.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri 2002017] gi|284923668|emb|CBG36765.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 042] gi|290764879|gb|ADD58840.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|291426069|gb|EFE99103.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|291431127|gb|EFF04120.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|291468716|gb|EFF11209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|294492817|gb|ADE91573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IHE3034] gi|298276840|gb|EFI18358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300306882|gb|EFJ61402.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|300357755|gb|EFJ73625.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300400612|gb|EFJ84150.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300413151|gb|EFJ96461.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300525052|gb|EFK46121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300532018|gb|EFK53080.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300840831|gb|EFK68591.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|305850413|gb|EFM50870.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|307628708|gb|ADN73012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UM146] gi|308118811|gb|EFO56073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|309704037|emb|CBJ03383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ETEC H10407] gi|312287283|gb|EFR15192.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|313647491|gb|EFS11941.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|315254021|gb|EFU33989.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 85-1] gi|315285378|gb|EFU44823.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 110-3] gi|320176306|gb|EFW51366.1| Formamidopyrimidine-DNA glycosylase [Shigella dysenteriae CDC 74-1112] gi|320179971|gb|EFW54913.1| Formamidopyrimidine-DNA glycosylase [Shigella boydii ATCC 9905] gi|320186825|gb|EFW61545.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri CDC 796-83] gi|320191314|gb|EFW65964.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC1212] gi|320193858|gb|EFW68491.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli WV_060327] gi|320201340|gb|EFW75921.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli EC4100B] gi|320639542|gb|EFX09150.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. G5101] gi|320644981|gb|EFX14011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. 493-89] gi|320650248|gb|EFX18737.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. H 2687] gi|320655600|gb|EFX23528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661334|gb|EFX28758.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. USDA 5905] gi|320666348|gb|EFX33347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. LSU-61] gi|323155286|gb|EFZ41469.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa14] gi|323166882|gb|EFZ52621.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 53G] gi|323179395|gb|EFZ64962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1180] gi|323944088|gb|EGB40168.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H120] gi|323949874|gb|EGB45758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H252] gi|323954825|gb|EGB50605.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H263] gi|324008140|gb|EGB77359.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 57-2] gi|324012605|gb|EGB81824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 60-1] gi|324019744|gb|EGB88963.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 117-3] gi|324111529|gb|EGC05510.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii B253] gi|324116026|gb|EGC09952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1167] gi|325499442|gb|EGC97301.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ECD227] gi|326337366|gb|EGD61201.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1044] gi|326339891|gb|EGD63698.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1125] gi|330909697|gb|EGH38211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AA86] gi|331041948|gb|EGI14092.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331062537|gb|EGI34457.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331072898|gb|EGI44223.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|332084445|gb|EGI89640.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 155-74] gi|332084815|gb|EGI89998.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 5216-82] gi|332089343|gb|EGI94447.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 3594-74] gi|332345603|gb|AEE58937.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNK88] gi|332749910|gb|EGJ80322.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-671] gi|332750592|gb|EGJ81000.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 4343-70] gi|332751169|gb|EGJ81572.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2747-71] gi|332764163|gb|EGJ94400.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2930-71] gi|332997786|gb|EGK17397.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-272] gi|333013320|gb|EGK32692.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-227] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|294010807|ref|YP_003544267.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] gi|292674137|dbj|BAI95655.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] Length = 270 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSLLTRVEPRRADLRFPIPADLRQRLTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ L T + + NDPR Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRIDPAEIGAH----------DHLLIGTGGGRL-LALNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + + Y P +GPEP F L K +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRSEAREAYNPFTRMGPEPLGPDFTPDSLAAALKGKATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R+ + + L L+ I++VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTREAGRIGRAR------LVLLVDAIREVLAAAIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG IRR + GRSTF+C CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPC--VCGTPIRRRLDGGRSTFFCPKCQK 270 >gi|82779125|ref|YP_405474.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae Sd197] gi|309784388|ref|ZP_07679027.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] gi|90101317|sp|Q329M2|FPG_SHIDS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81243273|gb|ABB63983.1| formamidopyrimidine DNA glycosylase [Shigella dysenteriae Sd197] gi|308927895|gb|EFP73363.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] Length = 269 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRILTEGLP----PEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|293463959|ref|ZP_06664373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|291321591|gb|EFE61027.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|323189457|gb|EFZ74738.1| formamidopyrimidine-DNA glycosylase [Escherichia coli RN587/1] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVVTKHAQRATFYCRQCQK 269 >gi|333012914|gb|EGK32291.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-304] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKQVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|296100497|ref|YP_003610643.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054956|gb|ADF59694.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRLRWPVSDEIHA-LSDKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|330447136|ref|ZP_08310786.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491327|dbj|GAA05283.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV +I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVVDQTVKEIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDA-GYAIVHLGMSGSLRVLPVGTP----VEKHDHVDLVLTSGE-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDEFNVEYLHQKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVTEIKSVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKPLSEAKIGQRATVFCVDCQK 269 >gi|26250281|ref|NP_756321.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227883803|ref|ZP_04001608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300984965|ref|ZP_07177217.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|301018964|ref|ZP_07183187.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|29611716|sp|Q8FC87|FPG_ECOL6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|26110711|gb|AAN82895.1|AE016769_10 Formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227839081|gb|EEJ49547.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300399458|gb|EFJ82996.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|300408245|gb|EFJ91783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|307555734|gb|ADN48509.1| formamidopyrimidine DNA glycosylase [Escherichia coli ABU 83972] gi|315292972|gb|EFU52324.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 153-1] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|110643876|ref|YP_671606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] gi|122957892|sp|Q0TBH4|FPG_ECOL5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110345468|gb|ABG71705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVEAIRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|53802792|ref|YP_115459.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] gi|81680673|sp|Q602J1|FPG_METCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53756553|gb|AAU90844.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] Length = 271 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + D+ + LR+ P G+++ DV RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIAGWRIVDVRVREARLRWPVPADLGETLTGRRLTDVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++I HLGMSGS I +H+HV + + + Y+DPR Sbjct: 61 LLDFDE-GTLIAHLGMSGSLRICKPGFP----PRKHDHVDLVFEGD-----ICLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L ++P L LGPEP D +F+ +L +N+ +K+ +++ ++VAG+ Sbjct: 111 RFG-CLLWTAEPPERHPLLAALGPEPLDKAFDGAHLHRLAAGRNTAVKSFIMDSRVVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R + L + I +VL +I+ GG++LRD+V Sbjct: 170 GNIYANEALFRAGIHPARPAGKISLAR------YRNLGEHIAEVLAASIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ GYF+ VY + G+PC CG+ IR + R+T+YC CQ+ Sbjct: 224 NESGAPGYFKQVLRVYDRAGQPC-RVCGEPIRCVRLGQRATYYCPRCQR 271 >gi|331675115|ref|ZP_08375872.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] gi|331068024|gb|EGI39422.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] Length = 269 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEEFPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L Q I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLTQVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|285019922|ref|YP_003377633.1| formamidopyrimidine-DNA glycosylase [Xanthomonas albilineans GPE PC73] gi|283475140|emb|CBA17639.1| probable formamidopyrimidine-dna glycosylase protein [Xanthomonas albilineans] Length = 270 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + L R +LR+ P + G++I + RRAKYL Sbjct: 1 MPELPEVETTRRGLEPHLAGRRIHGVILRRPDLRWPIPPEVTQQLPGQRIAGIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E ++HLGMSGS + H+HV +SL + + +NDPR Sbjct: 61 LLETAAGS-ALLHLGMSGSLRVLPGDTP----PRTHDHVDMSLEDGR-----VLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L LGPEP ++F+ YL + + +K L++Q+IV G+ Sbjct: 111 RFGCLLWQAPGTL--HPLLAELGPEPLSDAFDGDYLFQLSRGRKAPVKTFLMDQRIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R + + +L + + +L AI GG++LRD++ Sbjct: 169 GNIYAAESLFQAGISPLRAAGEVSRAR------YARLAEATKAILGYAIQRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG+++R R++ +C +CQ+ Sbjct: 223 SPDGAPGYFEQELSVYGREGEAC-KRCGRLLRHASIGQRASVWCGHCQR 270 >gi|256025635|ref|ZP_05439500.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 4_1_40B] gi|300948032|ref|ZP_07162172.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|300954471|ref|ZP_07166921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|301028394|ref|ZP_07191640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|301644301|ref|ZP_07244303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|307140333|ref|ZP_07499689.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H736] gi|312972080|ref|ZP_07786254.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|331644353|ref|ZP_08345482.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331655267|ref|ZP_08356266.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] gi|299878505|gb|EFI86716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|300318550|gb|EFJ68334.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|300452403|gb|EFK16023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|301077339|gb|EFK92145.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|310334457|gb|EFQ00662.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|315618662|gb|EFU99248.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3431] gi|323934820|gb|EGB31202.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1520] gi|323939606|gb|EGB35812.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E482] gi|331036647|gb|EGI08873.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331047282|gb|EGI19360.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] Length = 269 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + + N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMNNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|227551618|ref|ZP_03981667.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257895779|ref|ZP_05675432.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] gi|227179295|gb|EEI60267.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257832344|gb|EEV58765.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] Length = 278 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFVAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|332969356|gb|EGK08381.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330] Length = 272 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + + + + +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPKLRWQVPSDLADILQHQTVRQCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ +++HLGMSGS I + K H+H + T + Y+DPR Sbjct: 61 LIQLDT-GVLLIHLGMSGSLRIFRDTLPDAGK---HDHADFVFEDGT-----VLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + LR LG EP ++ F A YL + K+ +K A+++ IV G+ Sbjct: 112 RFGAILWLAGVAEH-HELLRNLGVEPLNDEFTADYLFDRLRGKHRAIKLAIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP R K L+ I+++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAISPNRPA------QSLSKQECADLVVAIKQILARAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G CL C +I + V R TFYC CQ+ Sbjct: 225 DSDGKSGYFQQEYKVYGRQGAGCL-RCSGLIEKSVLGQRGTFYCVQCQR 272 >gi|268593317|ref|ZP_06127538.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] gi|291311014|gb|EFE51467.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] Length = 269 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAVVRNSRLRWPVSEQI-KSLSDEAVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + H+HV + + + + Y DPR Sbjct: 60 LIELQT-GWIIVHLGMSGSVRILTEELPEEK----HDHVDLVMRDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP ++FN YL KK +K L++ K+V G+ Sbjct: 110 RFGAWLW--CDDLENSSVLAHLGPEPLSDAFNPQYLYELAQKKKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ K+SP + T +L + +L+Q+I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFATKISPEKITNTLTLAE------ITELVQQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC S CG I I Q RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPC-SMCGTPIESIKQGQRSTFFCPQCQK 269 >gi|193063825|ref|ZP_03044912.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194430623|ref|ZP_03063077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218697356|ref|YP_002405023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 55989] gi|260846600|ref|YP_003224378.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|307314280|ref|ZP_07593888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|254789437|sp|B7L758|FPG_ECO55 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192930540|gb|EDV83147.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194411335|gb|EDX27703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218354088|emb|CAV00637.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|257761747|dbj|BAI33244.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|306906103|gb|EFN36622.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|315062923|gb|ADT77250.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323160757|gb|EFZ46693.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E128010] gi|323182663|gb|EFZ68066.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1357] gi|323376484|gb|ADX48752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KO11] Length = 269 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVELVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|332367335|gb|EGJ45070.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1059] Length = 274 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDGFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|156972979|ref|YP_001443886.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi ATCC BAA-1116] gi|166198756|sp|A7MSN3|FPG_VIBHB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156524573|gb|ABU69659.1| hypothetical protein VIBHAR_00657 [Vibrio harveyi ATCC BAA-1116] Length = 269 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQKLKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDE-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLTNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAVLG--HMGPEPLTEEFNADYVAEKAKGKRVAIKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKEW------QLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGVCQK 269 >gi|116333678|ref|YP_795205.1| formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] gi|116099025|gb|ABJ64174.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] Length = 286 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ T+ + + + F+A +KI + RR KYL Sbjct: 1 MPELPEVETVRRGLTRLVQGATIAHVEVRYPKMVTPDADVFTAELISRKIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G+L+++ HL M G + ++ H HV LT+N + Y D R Sbjct: 61 LFRFSGDLTMVSHLRMEGKYDVQPEGSPVSK----HTHVIFHLTDNR-----ELRYTDTR 111 Query: 121 RFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M LV T + P L LGPEP + Y+ F K + +K LL+Q +AG Sbjct: 112 KFGRMQLVPTGEETTLAPSLGKLGPEPTAETLTLAYMVKIFGKSHKVVKPFLLDQTRIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E LW +K++P+ +L + L +L Q I + AI G+++ + Sbjct: 172 LGNIYADEVLWLSKINPLTPVDTLTPSQ------LSELRQNIIDEMALAIGGHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VYG+ GEPC CG + +I A R T +C +CQ Sbjct: 226 STAFGEAGQFQNQLHVYGREGEPC-ERCGTELVKIKVAQRGTHFCPHCQ 273 >gi|237810776|ref|YP_002895227.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] gi|237505017|gb|ACQ97335.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] Length = 276 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPVGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|297529111|ref|YP_003670386.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] gi|297252363|gb|ADI25809.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] Length = 274 Score = 212 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRQAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|117924919|ref|YP_865536.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] gi|166215631|sp|A0L837|FPG_MAGSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117608675|gb|ABK44130.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] Length = 275 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + + + + + LR+ P G+ I V+RRAKY Sbjct: 1 MPELPEVETTRRGIEPALVGKRLCGVVVRQPQLRWPIPVKTLEKELVGQVIQQVARRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +++VHLGMSGS I + +H+HV + V +DP Sbjct: 61 LLWR-CPQGTLLVHLGMSGSLRIV----PEHTPPAKHDHVDWVMEGGQ-----MVRLHDP 110 Query: 120 RRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + TS + ++P L LGPEP S N YL + +KN +++Q +V Sbjct: 111 RRFGAVVWIPVTSPEEEHPLLAKLGPEPLHRSLNGRYLHQGSRGRQLAVKNYIMDQSVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA ++P + L I+ VL D+I+ GG++LRD Sbjct: 171 GVGNIYASEALFRAGIAPAQAAGK------VGLGRYRALACAIKAVLGDSIEQGGTTLRD 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF + +VYG+ G+ C CG I + V RS++YC CQ+ Sbjct: 225 FIGSDGKPGYFVQSLNVYGRAGKAC-PKCGTTIEKQVLGQRSSYYCPQCQR 274 >gi|167585427|ref|ZP_02377815.1| formamidopyrimidine-DNA glycosylase [Burkholderia ubonensis Bu] Length = 276 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 149/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P +H+H+ + + Y DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVL-PTAGAPPAAAKHDHIDWIFDE------FVLRYRDPR 112 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + ++ ++K ALL IV Sbjct: 113 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRSVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTAAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG +R+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|269965915|ref|ZP_06180008.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] gi|269829468|gb|EEZ83709.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] Length = 269 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + +H+HV + L++ + YNDPR Sbjct: 60 LIETNK-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLSSGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQEWG------LLVENIKMTLEIAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|269137427|ref|YP_003294127.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|267983087|gb|ACY82916.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|304557501|gb|ADM40165.1| Formamidopyrimidine-DNA glycosylase [Edwardsiella tarda FL6-60] Length = 269 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLEGKTLSHLTVRQPRLRWPVSETLLT-LRDRPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ I++HLGMSGS I +H+HV + LT+ + Y DPR Sbjct: 60 LL-ALPEGWIVIHLGMSGSVRI----LPAQTPPQKHDHVDLLLTDG-----MMLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP +F+A YL + + + +K L++ +V G+ Sbjct: 110 RFGAWLWY--DDLATASVLAHLGPEPLSEAFSAEYLLERARGRRTAVKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL + + L+Q I+ VL +ID GG++LRD++ Sbjct: 168 GNIYASESLFSAQIHPDRLAGSLSADEAS------LLVQTIKAVLQRSIDQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE CL+ CG I+ R+TFYC +CQ+ Sbjct: 222 QADGKPGYFAQQLQVYGRAGEACLT-CGTTIKSSKHGQRTTFYCPHCQR 269 >gi|21730608|pdb|1L1T|A Chain A, Mutm (Fpg) Bound To Abasic-Site Containing Dna gi|21730611|pdb|1L1Z|A Chain A, Mutm (Fpg) Covalent-Dna Intermediate gi|21730614|pdb|1L2B|A Chain A, Mutm (Fpg) Dna End-Product Structure gi|21730618|pdb|1L2C|A Chain A, Mutm (Fpg)-Dna Estranged Thymine Mismatch Recognition Complex gi|21730621|pdb|1L2D|A Chain A, Mutm (Fpg)-Dna Estranged Guanine Mismatch Recognition Complex Length = 274 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|81429015|ref|YP_396015.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] gi|90101304|sp|Q38VS5|FPG_LACSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78610657|emb|CAI55708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] Length = 278 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 139/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + TV+ I + + + F+A G++I V RR KYL Sbjct: 1 MPELPEVENVRRGLETLAVGKTVSAIDIRWSKIIVNPDEVFTAGLVGQQITAVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+++ HL M G + + H HV T+ ++ Y D R Sbjct: 61 LIRFGEQLTVVSHLRMEGKYEVVAKEAPISK----HTHVIFEFTDGQ-----QMRYLDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + L+ LGPEP +F + K + +K LL+QK+V G+ Sbjct: 112 KFGRMQLIETGQENTVAGLKDLGPEPTPTTFLKADFYQRLQKHHKAIKPLLLDQKVVTGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW + + P L + +L EI L AI+ GG+++ ++ Sbjct: 172 GNIYVDETLWLSHIHPETPANDLTRAETD------RLHDEIIAELELAINHGGTTVNTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ VYGK G PC CG I +I A R T +C CQ Sbjct: 226 NATGHAGAFQEMLHVYGKKGVPC-ERCGTPIEKIKVAQRGTHFCPKCQ 272 >gi|30250471|ref|NP_842541.1| formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] gi|39931259|sp|Q82S12|FPG_NITEU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30139312|emb|CAD86464.1| Formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 156/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RR + + +T I + LR+ A G++I ++RRAKYL Sbjct: 1 MPELPEVEITRRGIDTHLAGRVITQISIRNPVLRWPISAGLIALLPGQRINAIARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++I+HLGMSG+ + S H+H + + N + + DPR Sbjct: 61 LF-ACSRGTLIMHLGMSGNLRVLPESTP----PQLHDHFDLQVDNG-----MMLRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+P L+ LGPEP + F+ +L + +N+++K L+NQ IV GI Sbjct: 111 RFGAILWWD-GDIRQHPLLQKLGPEPLSDDFDGQFLYTKTRGRNASIKEVLMNQHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A +SP+ S +L+ ++ L+ AI AGGSSLRD+ Sbjct: 170 GNIYANEALFQAGISPLAAAGS------LNTMQCERLVDAVKATLLRAIKAGGSSLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +GS GYFQ + VYG+ G+ C CG+++ + Q RSTF+C CQ Sbjct: 224 DCEGSPGYFQQQYWVYGRAGQSC-RQCGELVSKTRQGQRSTFFCARCQ 270 >gi|114332459|ref|YP_748681.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas eutropha C91] gi|122312915|sp|Q0AD66|FPG_NITEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114309473|gb|ABI60716.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosomonas eutropha C91] Length = 271 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + +T + + LR+ G++I ++RRAKYL Sbjct: 1 MPELPEVEVTRRGIDAHLAGRYITQVKIRNYALRWPVSPELITLLPGQRINTITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++I+HLGMSGS + S + H+H + L N + + DPR Sbjct: 61 LF-ACSKGTLIIHLGMSGSLRVLPVSTPSLL----HDHFELWLDNEK-----MLRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+P L+ LGPEP ++FN ++L + +++ ++K AL+NQ IV GI Sbjct: 111 RFGVILWWD-GDVRQHPLLQKLGPEPLSDAFNGLFLHEKIQRRSISIKEALMNQHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP+ SL + +L+ ++ L AI+AGGSSLRD+ Sbjct: 170 GNIYANEALFHAGISPLIAAGSLSTA------LCARLVDAVKMTLQRAIEAGGSSLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G FQ + VYG+TG+PC CG ++ + Q RS+F+C CQK Sbjct: 224 DCDGSPGCFQQQYWVYGRTGQPC-RKCGALVSKTRQGQRSSFFCAQCQK 271 >gi|90580917|ref|ZP_01236719.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] gi|90437988|gb|EAS63177.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] Length = 269 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDV-GYAIVHLGMSGSLRVLPVGTP----VEKHDHVDLVLTSGE-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDDFNVEYLHEKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVAEIKSVLAFAIKQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKALSEAKIGQRATVFCSDCQK 269 >gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] gi|122449230|sp|Q1WUN7|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ N + DI + + F K I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVNEESEFIEKLTNKTIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + +E + +H HV T+ T+ + YND R Sbjct: 61 LFRFSSDLTMISHLRMEGKYFVE----PSTKEVEKHTHVVFDFTDGTS-----LRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+ Sbjct: 112 KFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQTIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P L + + L I K L A +AGG+++R Y Sbjct: 172 GNIYADEVLWMSKIHPETPANKLTEEE------VKVLRDNIIKELALATEAGGTTIRSYT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G FQ + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 226 DAFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 272 >gi|331659955|ref|ZP_08360893.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] gi|222035343|emb|CAP78088.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli LF82] gi|312948196|gb|ADR29023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O83:H1 str. NRG 857C] gi|315297030|gb|EFU56310.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 16-3] gi|331053170|gb|EGI25203.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] Length = 269 Score = 212 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLAGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|83643461|ref|YP_431896.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|123535001|sp|Q2SPF3|FPG_HAHCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83631504|gb|ABC27471.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 271 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + ++ LR+ P AA +GK +++V+RRAKYL Sbjct: 1 MPELPEVETTRRGVAPHITGRKILQVNIYEPRLRWPVPMDLPAAAQGKTVLNVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+ ++ HLGMSG+ I + H+HV I L + + YNDPR Sbjct: 61 LI-NLGDDELLFHLGMSGNLRIVAPETPRMK----HDHVDILLEGD-----ITLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + +P L+ LGPEP + F+ L + ++ S +K L++Q IV G+ Sbjct: 111 RFGCLLLLNPPTQE-HPLLKHLGPEPLSDQFSGELLYKRSRQRKSPVKTFLMDQAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L + ++KVL DAI+ GG++LRD+V Sbjct: 170 GNIYANEALFLAGIRPTRAAGEVSLKRYQV------LAEAVRKVLSDAINMGGATLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC + C ++ I R++ +C CQ+ Sbjct: 224 GGDGKPGYFQQTLRAYGRGGQPC-TVCQTELKEIKLGQRTSVFCPSCQR 271 >gi|242237621|ref|YP_002985802.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] gi|242129678|gb|ACS83980.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] Length = 269 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL +IVHLGMSGS + + I+ +H+HV + L + + Y DPR Sbjct: 60 LIELTS-GWMIVHLGMSGSLRV----LPEYIEPDKHDHVDLVLDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG P L LG EP +F YL Q + + +K +++ K+V G+ Sbjct: 110 RFGAWLWSP--DPSTSPVLAHLGLEPLGAAFTGEYLFSQSRGRKTPVKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + ++L+ I+ VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFGAGILPDRPAGSLSEQE------AHRLVATIRAVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF A VYG+TGEPC CG + + Q RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQALQVYGRTGEPC-RQCGTPVESVKQGQRSTFFCRHCQ 268 >gi|260770731|ref|ZP_05879661.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] gi|260614312|gb|EEX39501.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] Length = 278 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETVRSLTFRTPKLRWDIPAEL-KQMEGQVITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS + +H+HV ++LTN + YNDPR Sbjct: 60 MIET-SVGSAIVHLGMSGSLRVLDGDFP----PAKHDHVDLTLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ +GPEP + FNA YL H+ KK +K+ +++ KIV G+ Sbjct: 110 RFGAWLWCPAGEHHEVLG--HMGPEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P+R SL + T L+ +I+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAHIHPLRPAHSLSEAEWTS------LVADIKAVLTTAIAQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC CG+ I + R++F+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKKGQPC-PRCGEPIAELKIGQRNSFFCLQCQ 268 >gi|218702401|ref|YP_002410030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI39] gi|226706480|sp|B7NPE1|FPG_ECO7I RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218372387|emb|CAR20261.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 269 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|157373071|ref|YP_001481060.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] gi|166988464|sp|A8GLE2|FPG_SERP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157324835|gb|ABV43932.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] Length = 269 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIEL-ASGWIIVHLGMSGSLRM----LAEETEAGKHDHVDLVISNG-----MTLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP +F YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CDDLATSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAGSLSKVEAEV------LVATIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIESAKHGQRSTFFCPRCQR 269 >gi|260887311|ref|ZP_05898574.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|330838935|ref|YP_004413515.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] gi|260862947|gb|EEX77447.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|329746699|gb|AEC00056.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] Length = 477 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L V +T++ + +RF F + RG++I+ + RR KY Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITEVDVLLPRTIRFPEVEAFRSRVRGQRILCLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ LE ++++HL M+G F +H L + + + + D Sbjct: 61 LMLPLESGETLLLHLRMTGRFYRRDADTPT----GRHVRAIFHLDDGSC-----LFFEDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L++ + +P +GPEP F+A YL K + +K+ LL+Q VAG Sbjct: 112 RTFGEIHLLQPQERKAFPAFSCMGPEPLTEEFDASYLYDAMQKSSQRIKSFLLDQGKVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+R+ +L + ++L Q I KV+ + I+ GG++ RDY Sbjct: 172 LGNIYVDEALFFAGVHPLRRAHTLNHDE------AFRLWQAINKVIAEGIEDGGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V +G G+ Q VY + GEPCL CG I +I GR T +C +CQ Sbjct: 226 VDGEGKSGFHQQKLRVYHREGEPCL-VCGTKIEKIRVGGRGTHFCPHCQ 273 >gi|302877714|ref|YP_003846278.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] gi|302580503|gb|ADL54514.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] Length = 276 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 144/289 (49%), Gaps = 13/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + TVT + +LR+ P + + G+ ++ +SRRAKYL Sbjct: 1 MPELPEVETTRRGLAPYLADATVTGVVTRTPSLRWPIPENLNELLNGQPVVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + ++I+HLGMSGS I T A H+H + L N + R Sbjct: 61 LLE-FRHGTLILHLGMSGSLRILPTGTA----PQPHDHFDLLLDNG-CLMRLRDPRRFGA 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + T L + FNA YL + +K +++ IV G+ Sbjct: 115 VLWHQGNINTHPLLVKLGPEPLDDRDGNCRFNAHYLYQATRGRRVAIKQFIMDSAIVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A ++P+ K L KL I+ L +AI AGGS+LRD+V Sbjct: 175 GNIYASEALFSAGINPLSKAGELSFA------HCEKLADVIRSTLNEAILAGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ GYFQ VY + GEPC C I +I Q RS+FYCT+CQK Sbjct: 229 NASGNPGYFQQQHWVYSRAGEPC-RICSAPIMQIKQGQRSSFYCTHCQK 276 >gi|261341756|ref|ZP_05969614.1| hypothetical protein ENTCAN_08235 [Enterobacter cancerogenus ATCC 35316] gi|288316124|gb|EFC55062.1| DNA-formamidopyrimidine glycosylase [Enterobacter cancerogenus ATCC 35316] Length = 269 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHA-LSDKPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHSALAHLGPEPLSEAFNADYLRAKCAKKKAPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|261856609|ref|YP_003263892.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] gi|261837078|gb|ACX96845.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] Length = 281 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T + LR+ +A G+ II VSRR+KYL Sbjct: 1 MPELPEVETTRRGLEPHLLGQRITSATVFDSRLRWRVRDDLAAWLEGRLIIAVSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E +++HLGMSGS I + H+HV I + ++ N + ++DPR Sbjct: 61 LLHFENGERLLIHLGMSGSLRIVTPDIPRRK----HDHVEICINSSKN-----LRFHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + + L+ LGPEP ++F+ YL Q HK+ +K L+N IV G+ Sbjct: 112 RFGA--LLTDHEQAPHIRLQNLGPEPLSDAFDTHYLGTQLHKRKQAIKPCLMNAAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ + + P +L N + L+ I+ VL AI+ GG++LRD+V Sbjct: 170 GNIYANEVLFLSGIHPATPAHTLDHNQ------INLLVTAIKNVLARAIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VY + +PC C I + VQA R+T+YC CQ Sbjct: 224 REDGQPGYFKQTLNVYDRADQPC-RVCSTPIVKTVQAQRATYYCPVCQ 270 >gi|258508755|ref|YP_003171506.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|257148682|emb|CAR87655.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|259650061|dbj|BAI42223.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] Length = 282 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 154/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------IHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|261250531|ref|ZP_05943106.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] gi|260939100|gb|EEX95087.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] Length = 268 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 151/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGETVAKLTFRTPKLRWDIPQEL-KQMEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + A +H+HV + LTN + YNDPR Sbjct: 60 LIETDV-GCAIVHLGMSGSLRVLDAEIA----PAKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L +GPEP + FNA Y+ + K +K +++ K+V GI Sbjct: 110 RFGAWLWTEDG---NHTALGIMGPEPLTDEFNADYIAEKAKGKRVAVKQFIMDNKVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R + + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKITKKEWV------LLVSEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC +CG+ I R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKAGEPC-PSCGEPISEQKIGQRNTFFCGECQK 268 >gi|328946707|gb|EGG40845.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1087] Length = 274 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDVFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYLDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|283836014|ref|ZP_06355755.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] gi|291068196|gb|EFE06305.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] Length = 269 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIY-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRILPEELPADK----HDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTT--ELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL ++ L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSKDE------CGLLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RICGTPIVAAKHAQRTTFYCRRCQK 269 >gi|307133078|ref|YP_003885094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] gi|306530607|gb|ADN00538.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] Length = 269 Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGHTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-PTGWIIVHLGMSGSLRV----LPEYSEPDKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + F+ YL Q + + +K +++ K+V G+ Sbjct: 110 RFGAWLW--CDDPATSSVLAHLGPEPLSDDFSGRYLFAQSRGRKTPIKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGVLPNRPAGSLSEVEADQ------LVRSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRSGEPCHH-CGTPIESIKQGQRSTFFCKCCQR 269 >gi|125718413|ref|YP_001035546.1| formamidopyrimidine-DNA glycosylase [Streptococcus sanguinis SK36] gi|125498330|gb|ABN44996.1| Formamidopyrimidine-DNA glycosylase, putative [Streptococcus sanguinis SK36] Length = 274 Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + H HV T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDEVPERK----HAHVFFETTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP F ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLETYFTARKLGPEPTAADFLLPPFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKKGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|332996140|gb|EGK15767.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri VA-6] Length = 269 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPNLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|254229482|ref|ZP_04922897.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262392591|ref|YP_003284445.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|151938053|gb|EDN56896.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262336185|gb|ACY49980.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] Length = 269 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPIELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + +H+HV + L++ + YNDPR Sbjct: 60 LIETNT-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLSSGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQEWGG------LVENIKMTLEIAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|268319915|ref|YP_003293571.1| hypothetical protein FI9785_1445 [Lactobacillus johnsonii FI9785] gi|262398290|emb|CAX67304.1| mutM [Lactobacillus johnsonii FI9785] Length = 276 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T++ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTISKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKYHLVTPDQPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKS------IPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|239632071|ref|ZP_04675102.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526536|gb|EEQ65537.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 282 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDANTPFDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|323965901|gb|EGB61349.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M863] gi|327250761|gb|EGE62463.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_7v] Length = 269 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-CLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|323975145|gb|EGB70250.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10509] Length = 269 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIMATKHAQRATFYCRQCQK 269 >gi|53724080|ref|YP_104600.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121599146|ref|YP_991435.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124384583|ref|YP_001027489.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10229] gi|167001041|ref|ZP_02266842.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|238561326|ref|ZP_00442180.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|254175289|ref|ZP_04881950.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|254201689|ref|ZP_04908053.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|254207021|ref|ZP_04913372.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|254357500|ref|ZP_04973774.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|262193291|ref|YP_001082455.2| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10247] gi|81684913|sp|Q62FC7|FPG_BURMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215615|sp|A2S6C0|FPG_BURM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215616|sp|A1UZN2|FPG_BURMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52427503|gb|AAU48096.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121227956|gb|ABM50474.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124292603|gb|ABN01872.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10229] gi|147747583|gb|EDK54659.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|147752563|gb|EDK59629.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|148026564|gb|EDK84649.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|160696334|gb|EDP86304.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|238524786|gb|EEP88217.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|243063112|gb|EES45298.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|261835059|gb|ABO05590.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10247] Length = 272 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + F+A L + + ++K ALL IV G+ Sbjct: 113 RFGAVLWHPRDAGDVHAHPL--LASLGVEPFSAALLFGRTRGRTVSVKQALLAGDIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD+V Sbjct: 171 GNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 225 GSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 272 >gi|326793829|ref|YP_004311649.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] gi|326544593|gb|ADZ89813.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] Length = 271 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 152/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N T+ + + + LR+ P A G+K+ VSRR KY+ Sbjct: 1 MPELPEVETTKRGIEPNIVNKTIQQVVIRQPKLRWPIPDA-VNALSGQKVESVSRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++I+HLGMSGS H+HV I ++ + Y DPR Sbjct: 60 GVHTKA-GTLIIHLGMSGSLYFVDAGTP----PLFHDHVDIEFSD----SPIVMRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M ++ L++LGPEP ++F+A YL + + +K +++ K+V G+ Sbjct: 111 RFGAMLWQP-GDWLEHELLKSLGPEPLTDAFHADYLYERAQGRKQAIKMFIMDSKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + + L + I++VL AI+ GG++L+D+V Sbjct: 170 GNIYANEALFKAGIHPKRAAGKISRAR------LEAFVASIKEVLSAAIEQGGTTLKDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VYG+ GE C+S C + I RST YC CQ Sbjct: 224 GGDGKPGYFKQELAVYGRGGEKCIS-CSNELSEIRLGQRSTVYCNNCQ 270 >gi|77461572|ref|YP_351079.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf0-1] gi|90101312|sp|Q3K566|FPG_PSEPF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77385575|gb|ABA77088.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVEVGMP----AAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M ++ + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SNDPLNHELLIRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRARYL------KLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R + R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEHC-KVCGTGLREMKLGQRASVWCPRCQ 269 >gi|126664537|ref|ZP_01735521.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] gi|126630863|gb|EBA01477.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ TV + + LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQTVRSVGVRNGRLRWPVPEDLAVRLEGEVIRSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ +IVHLGMSGS I A H+HV ++L + R+ YNDPR Sbjct: 61 FLNLDSGS-VIVHLGMSGSLRIITDDSAALT----HDHVELTLHSG-----VRLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S +P + +LGPEP FN YL + K++ +K+ +++ +V G+ Sbjct: 111 RFG--CWLWSSNPSTHPLIASLGPEPLAPEFNGAYLFRRSRGKSTAVKSFIMDGHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + ++L++ IQ+ L AI GG++LRD+V Sbjct: 169 GNIYANEALFGAGIHPRRQAGRISLSR------YHRLVEVIQETLTAAILMGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF + VYG+ G+PC C +R I R+T YCT CQ+ Sbjct: 223 NSDGQPGYFAQSLLVYGRGGQPC-PECQAKLREIRMNQRATVYCTRCQR 270 >gi|152979915|ref|YP_001354814.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] gi|166215629|sp|A6T2R7|FPG_JANMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151279992|gb|ABR88402.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] Length = 273 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ +T + L LR+ FP S G+ + RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGQVITGVALRHTGLRWPFPATLSQTLAGRTVRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++I+HLGMSG I + +H+H + R+ Sbjct: 61 LIH-FDHGTLIIHLGMSGHLRILPSDVP----PKKHDH----FDLEIGPQLLRLTDPRRF 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E + LRTLG EP + +F+A +L Q ++S +K LL IV G+ Sbjct: 112 GAVLWHAAEDGSIENHLLLRTLGVEPLEAAFSAQWLYQQTRNRSSAIKQVLLAGDIVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A+++P + +L + I+++L AI+ GGS+L+D++ Sbjct: 172 GNIYASESLFQARINPKTPAHRIGLAR------YERLAEAIRQILAAAIEQGGSTLKDFI 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G GYFQ + Y +TGEPC C IR+IVQ RSTFYC CQK Sbjct: 226 GVNGQSGYFQQNYFCYARTGEPC-RICKTPIRQIVQGQRSTFYCPNCQK 273 >gi|325957303|ref|YP_004292715.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] gi|325333868|gb|ADZ07776.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] Length = 276 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKYHLTTPEVPKDK----HDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTELQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P D + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHPLSLANK------IPADKVEDLRKNINETIKIAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHAGEAC-PRCGTTLEKIKVSGRGTTFCPHCQ 272 >gi|94495382|ref|ZP_01301962.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] gi|94424770|gb|EAT09791.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSRLTRVEPRRADLRFPIPVDLRQRMTGAIVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +I HLGMSG + I+ + H+H+ + + NDPR Sbjct: 61 LIETDRGDMMIFHLGMSGRWRIDPA------EIGAHDHLLVETDQGRI-----LSLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV Y P +GPEP + F+ L + +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRADAWTGYAPFTRMGPEPLGDDFSPAMLATALKGRATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R + L L++ I+ VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTRAAGRIGAAR------LALLVEAIRTVLTAAITAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +RR V GRSTFYC CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPCP--CGGTVRRRVDGGRSTFYCPTCQK 270 >gi|332362411|gb|EGJ40211.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1056] Length = 274 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIDQVRVCYAKMIGTGADSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFQMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRAK+ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAKIHPARPADSLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|258625891|ref|ZP_05720766.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] gi|258581855|gb|EEW06729.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] Length = 269 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL ++ L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLSLDDWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|317494722|ref|ZP_07953134.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917324|gb|EFV38671.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 269 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + + + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELL-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS I +H+HV + L++ + Y DPR Sbjct: 60 LIEL-ADGWIIVHLGMSGSVRILPADEP----PQKHDHVDMILSSG-----MMLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CKDLDSSNVLAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++SP R L Q + L+ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFTARISPDRPAGDLTQADAEV------LVATIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C CG+ I R+TF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRAGEAC-RVCGEKILSGKHGQRTTFFCPRCQK 269 >gi|34499517|ref|NP_903732.1| formamidopyrimidine-DNA glycosylase [Chromobacterium violaceum ATCC 12472] gi|39931210|sp|Q7NQS5|FPG_CHRVO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|34105367|gb|AAQ61722.1| DNA-formamidopyrimidine glycosylase [Chromobacterium violaceum ATCC 12472] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 157/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T+ + +LR+ P S G+K++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLEGRTLLGAVVRNPSLRWPVPPDLSERVAGEKVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + ++++HLGMSGS + +H+H+ + L + + DPR Sbjct: 61 LLE-CESGTLLIHLGMSGSLRVMPAGAP----PQKHDHLDLLLGEQ------VLRFRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L+ LGPEP ++F+ L ++ S +K A+++ +V G+ Sbjct: 110 RFGAVLWH-LGPVEMHPLLQALGPEPLSDAFDGAALHQAIRRRGSPIKLAIMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R L + + +L EI+ VL AIDAGGS+LRD+V Sbjct: 169 GNIYANESLFHAGISPARAACDLSRAD------CDRLAAEIKAVLRRAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VY + EPC CG IR+I Q RST+YC CQ Sbjct: 223 DSEGKPGYFQQTYMVYNRQEEPC-RLCGTPIRQIRQGQRSTYYCPLCQ 269 >gi|85374938|ref|YP_459000.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] gi|122543790|sp|Q2N7Y8|FPG_ERYLH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84788021|gb|ABC64203.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] Length = 271 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T +R ++RF FP A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGERITRTVTNRPDMRFPFPDGLGQALTGATVVSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ K H+H+ I + +R DPR Sbjct: 61 LIHTDRDQTMIFHLGMSGRWRIDPDETDK------HDHLLIETAD------HRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV T Q+P +GPEP ++ +L + +K LL+Q IVAG+ Sbjct: 109 RFGWVDLVGTQALDQWPGFAAMGPEPLGDALTIEHLRAALSGRKQAIKLCLLDQAIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A++ P + + K L LI I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWHARIHPRKAGGRVS------KQALSLLITAIRDVLEQSIRDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+ G+PC + G IRR Q GRST+YC CQ+ Sbjct: 223 QPDGELGYFATRFQVYGRDGQPCHRDDGGTIRRFAQGGRSTWYCPRCQR 271 >gi|85060184|ref|YP_455886.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] gi|123518744|sp|Q2NQU4|FPG_SODGM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84780704|dbj|BAE75481.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] Length = 269 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A R ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPWVAGQTILRAEVRNARLRWPVDEEIIA-LRDQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSG + +P +H+HV + + N + Y DPR Sbjct: 60 LLEL-EKGWIIIHLGMSGRLRV----LPQPQPPEKHDHVDLVIGNG-----CIIRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ +L + H K +++K L++ +V G+ Sbjct: 110 RFGAWLW--SDDLRTSRALAHLGPEPLSDKFDGRWLYQKSHNKRTSIKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L + I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPGRAAGSLSEEE------AGLLAESIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I+ RSTF+C CQ Sbjct: 222 QSDGKPGYFVQELQVYGRGGEPC-RVCGTPIQMAKHGQRSTFFCPACQ 268 >gi|295095221|emb|CBK84311.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 269 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHA-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RACGTPIIATKHAQRATFYCRQCQK 269 >gi|149376939|ref|ZP_01894694.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] gi|149358831|gb|EDM47300.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] Length = 274 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 154/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +N T+T + + LR+ P + + G I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHCENRTITQVTVRDGRLRWPVPGNLAELIEGSVIHTVDRRAKYL 60 Query: 61 LI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LI ++IVHLGMSGS + A + H+HV ++L N R+ +N Sbjct: 61 LIGVSSANAAGTLIVHLGMSGSLRVITDQSAPLL----HDHVELTLDNG-----IRLRFN 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG ET Q+P L +LGPEP FN L K + +K +++ +V Sbjct: 112 DPRRFGCWLWSETPD--QHPLLASLGPEPLAPEFNGRLLYRLSRSKKTPVKPFIMDNHVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL++A + P R + + +L++ I++ L AI GG++LR Sbjct: 170 VGVGNIYANEALFKAGIHPRRAAGRISLDRYN------RLVEAIRETLSAAILMGGTTLR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ DG GYF + VYG+ GE C CG ++ I RST YC CQ+ Sbjct: 224 DFVNSDGKPGYFAQSLLVYGRNGEFC-RECGHPLKEIRMNQRSTVYCGKCQR 274 >gi|199599522|ref|ZP_03212911.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] gi|199589591|gb|EDY97708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] Length = 282 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAKGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|261207883|ref|ZP_05922568.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289566951|ref|ZP_06447355.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|294617838|ref|ZP_06697449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] gi|260078266|gb|EEW65972.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289161250|gb|EFD09146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|291595911|gb|EFF27193.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] Length = 278 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|300692626|ref|YP_003753621.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] gi|299079686|emb|CBJ52363.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] Length = 288 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 146/300 (48%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVTRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + T A H+H+ I L + + Sbjct: 61 LIECVPDAAREPLAVAGWLLVHLGMTGTLRVLETPVA----PGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSAHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|191638698|ref|YP_001987864.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei BL23] gi|190713000|emb|CAQ67006.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus casei BL23] gi|327382739|gb|AEA54215.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W] gi|327385926|gb|AEA57400.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II] Length = 282 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDASTPFDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|208807998|ref|ZP_03250335.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] gi|208727799|gb|EDZ77400.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] Length = 270 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +D+ +K +K L++ K+V G+ Sbjct: 110 RFGAWLWTKELEGHNVLAHLG-PEPLSDDFNGEYLHQKCAKEKKRTIKPWLMDNKLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 169 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 223 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 270 >gi|28896963|ref|NP_796568.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|153839968|ref|ZP_01992635.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|260362380|ref|ZP_05775338.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] gi|260897658|ref|ZP_05906154.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|260899588|ref|ZP_05907983.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|31076660|sp|Q87T81|FPG_VIBPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28805171|dbj|BAC58452.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|149746507|gb|EDM57496.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|308087494|gb|EFO37189.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|308108775|gb|EFO46315.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|308115128|gb|EFO52668.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRNIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIDT-DQGTAIVHLGMSGSLRVLDADFP----AAKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LEHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|294615647|ref|ZP_06695502.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] gi|291591476|gb|EFF23130.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] Length = 278 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|237728932|ref|ZP_04559413.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] gi|226909554|gb|EEH95472.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I H+HV + ++N + Y DPR Sbjct: 60 LLEL-ADGWIIIHLGMSGSLRILPEELPADK----HDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R T SL ++ L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLTSSLSKDE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RACGAPIVATKHAQRTTFYCRRCQK 269 >gi|327470595|gb|EGF16051.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK330] Length = 274 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDEVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLSHFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|299068042|emb|CBJ39256.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CMR15] Length = 288 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + T A H+H+ I L + + Sbjct: 61 LIECVPDVARGPQAGAGWLLVHLGMTGTLRVLETPAA----PGTHDHLDIELADADG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALSAHPLLRNLGIEPFDARFDGNWMHARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|227889521|ref|ZP_04007326.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] gi|227849999|gb|EEJ60085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] Length = 276 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIAKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKYHLVTPDQPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKS------IPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q+ VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQSMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|82701716|ref|YP_411282.1| formamidopyrimidine-DNA glycosylase [Nitrosospira multiformis ATCC 25196] gi|123544992|sp|Q2YBI1|FPG_NITMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|82409781|gb|ABB73890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosospira multiformis ATCC 25196] Length = 272 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR + ++ + + + NLR+ P G +I V+RR KYL Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRWPVP-ELERTLCGLEIRTVTRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ G ++I+HLGMSGS + + A I +H+H+ + L + + DPR Sbjct: 60 LLD-CGAGTLILHLGMSGSLRLL--ALAANIAPQKHDHIDLLLDKG-----MVLRFRDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP +F+ L + +++++K L+N +IV G+ Sbjct: 112 RFGAVLW-TTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L Q I++ L AI+AGGSSLRD+V Sbjct: 171 GNIYANEALFLAGIDPANAAGRIGARR------CAGLAQAIKETLGRAIEAGGSSLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VY +TG+PC CG I +I Q RS+FYC CQK Sbjct: 225 GSDGNPGYFQQQYWVYSRTGQPC-RKCGTNIEQIRQGQRSSFYCPRCQK 272 >gi|300361189|ref|ZP_07057366.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] gi|300353808|gb|EFJ69679.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] Length = 276 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFIKKLTNKTILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G+L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNGDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y + +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLTYFINALSRKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPL------SSAQAIPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S CG ++ +I GR T +C +CQ Sbjct: 226 DANGQIGGYQKMLQVYGHAGEEC-SKCGTILEKIKVNGRGTTFCPHCQ 272 >gi|157149253|ref|YP_001456571.1| formamidopyrimidine-DNA glycosylase [Citrobacter koseri ATCC BAA-895] gi|166215620|sp|A8ARM2|FPG_CITK8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157086458|gb|ABV16136.1| hypothetical protein CKO_05093 [Citrobacter koseri ATCC BAA-895] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHANVRNGRLRWPVSEEIY-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGAYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQVE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVAAKHAQRATFYCRQCQK 269 >gi|212712569|ref|ZP_03320697.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] gi|212684785|gb|EEB44313.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNERLRWPVSEQI-KRLSDETVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + H+HV + L + + Y DPR Sbjct: 60 LIELRK-GWIIVHLGMSGSVRILTEELPEEK----HDHVDLILGDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP + FN YL K+ +K L++ K+V G+ Sbjct: 110 RFGAWLWCE--DLASSSVLAHLGPEPLSDEFNPQYLFDLAAKRKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +K+SP + T +L + + +L+ +I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFASKISPEKLTNTLTLHE------ITELVTQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG I I Q R+TFYC CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPCSL-CGTPIESIKQGQRTTFYCPQCQ 268 >gi|238783983|ref|ZP_04627999.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] gi|238715091|gb|EEQ07087.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] Length = 269 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PTGWIIVHLGMSGSLRVLPEETA----AGKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP ++ FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAT--DLETSNVLAHLGPEPLNDEFNPQYLFDKSRNKRTLVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTQAE------ISLLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CGQ+I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGQLIEIAKHGQRSTFFCRHCQ 268 >gi|331685298|ref|ZP_08385884.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] gi|331077669|gb|EGI48881.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] Length = 269 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGESC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|325696174|gb|EGD38065.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK160] Length = 274 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + H HV T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDEVPERK----HAHVFFETTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLEAYFAARKLGPEPTDSDFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPNCQK 272 >gi|298290594|ref|YP_003692533.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] gi|296927105|gb|ADH87914.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] Length = 299 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 129/304 (42%), Positives = 174/304 (57%), Gaps = 20/304 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LR+ P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMEGRRILAAVARRPDLRWPLPERFAERLTGRRIGRLGRRAKYL 60 Query: 61 LIELEGNL-----SIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNN 106 + ++E +++HLGMSGSF IE K H+HV + Sbjct: 61 VADIEPQDGAAPEVLVMHLGMSGSFRIEPDEGVPSVPGDFVMARSKTSAHDHVAFRMEGG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 V+YNDPRRFG M LV + +P R +GPEP FNA L + + Sbjct: 121 -----VEVVYNDPRRFGAMLLVPRAELDAHPLFRDIGPEPLGPGFNAESLAQALAGRRTP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+QK+VAG+GNIYVCEAL RA LSP R+ SL+ G P +L+ +++VL Sbjct: 176 IKAALLDQKVVAGLGNIYVCEALHRAGLSPERQAASLVTATGKPTAATRRLVGIVREVLE 235 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCT 285 +AI AGGS+LRD+ +DG++GYFQ+ F Y + GE CL C I R+VQ+GRSTFYC Sbjct: 236 EAIAAGGSTLRDHAQVDGTLGYFQHTFRAYDREGEACLTPGCRGTIARLVQSGRSTFYCA 295 Query: 286 YCQK 289 CQ+ Sbjct: 296 TCQR 299 >gi|315499380|ref|YP_004088184.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] gi|315417392|gb|ADU14033.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] Length = 293 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 111/298 (37%), Positives = 157/298 (52%), Gaps = 15/298 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ ++ + LHR NLR+ FP F+ G +I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPALEHAQLSGLRLHRPNLRYAFPERFAEQLEGAEILRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH--------TSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L L+ + HLGM+G F + P H+ + + Sbjct: 61 LFHLDTQAVWVTHLGMTGRFQVTDMNGHSLRLDGDYYHAVRPDPRHLHVQVLATKEGVTR 120 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + DPRRFGFM L+ Y + LG EP ++ N L F + + LK+ L+ Sbjct: 121 LIDFYDPRRFGFMLLLRPDDLYTQRWYKGLGLEPLSDALNTDALHALFSVRRTPLKSLLM 180 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +++G+GNIYVCEALWRA LSP L L +++VL +A+ AG Sbjct: 181 DQTLISGLGNIYVCEALWRAGLSPDLPGNRLSHA------KAALLTHAVREVLEEAVAAG 234 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+ D+ G +GYFQ+ F VY + EPCL C I R +GRSTFYC CQK Sbjct: 235 GSSISDFTSASGELGYFQHRFRVYDREDEPCLRPGCAGTIARKTHSGRSTFYCPACQK 292 >gi|325687307|gb|EGD29329.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK72] Length = 274 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + H HV T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDEVPECK----HAHVFFETTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P+R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPVRPAASLKPAE------VRRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|293569013|ref|ZP_06680326.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] gi|291588446|gb|EFF20281.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] Length = 278 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRSKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|258620580|ref|ZP_05715617.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] gi|258587095|gb|EEW11807.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] Length = 269 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWSIPQEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +TN R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----VAKHDHVDLVMTNGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMADKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P+R SL + L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSCIHPLRPANSLSLDEWQT------LVTNIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|332358722|gb|EGJ36545.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK355] Length = 274 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLKRLVVGKTIGQVRIRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADSLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|229552557|ref|ZP_04441282.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|258539930|ref|YP_003174429.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] gi|229314109|gb|EEN80082.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|257151606|emb|CAR90578.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] Length = 282 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++K+ +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTAFQKQVVGAAVTTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|167629831|ref|YP_001680330.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] gi|238687886|sp|B0TER7|FPG_HELMI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167592571|gb|ABZ84319.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] Length = 277 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 153/290 (52%), Gaps = 14/290 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + +T+ + L + F P F+ A RG++II++ RR KY Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEKVELRLPKIAFALPGTLFTDALRGRRIIELGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G+ ++++HL M+G I + H H L + + + Y D Sbjct: 61 LLLHLDGDETLVIHLRMTGRL-IHLRPEEREEPEAAHTHAVFFLDDGS-----LLRYTDV 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L+ + P LGPEP F+ + + K+ + LK LL+Q +AG Sbjct: 115 RQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQSFLAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+L P R SL +L I+ VL + IDA G+S RDY Sbjct: 175 LGNIYADEALARARLHPDRTADSLDDEES------RRLYDCIRTVLQEGIDAKGTSFRDY 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G FQ VYG+ G PC CG I R +AGRST +C CQK Sbjct: 229 VDGEGRKGEFQEKLWVYGRGGNPC-RRCGGEILREKRAGRSTHFCPRCQK 277 >gi|323495234|ref|ZP_08100316.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] gi|323310494|gb|EGA63676.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] Length = 268 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 150/288 (52%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV I LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLVGETVAKITFRTPKLRWDIPAEL-KQMEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE S IVHLGMSGS + A +H+HV + LTN + YNDPR Sbjct: 60 LIET-DIGSAIVHLGMSGSLRVLDAEIA----PAKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L T+GPEP + FN Y+T + K +K +++ K+V G+ Sbjct: 110 RFGAWLWTEDG---THAALGTMGPEPLTDEFNPDYITEKAKGKRVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R L L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKLTHKEW------ALLVDEIKQVLTTAIKQGGTTLKDFS 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC NCG+ + R+TF+C CQ Sbjct: 221 QADGKPGYFAQELLVYGKAGEPC-PNCGEPLEEQKIGQRNTFFCAECQ 267 >gi|17545118|ref|NP_518520.1| formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum GMI1000] gi|24211708|sp|Q8Y2D7|FPG_RALSO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17427409|emb|CAD13927.1| probable formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum GMI1000] Length = 288 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + T A H+H+ I L + + Sbjct: 61 LIECVPDIAHGPQAGAGWLLVHLGMTGTLRVLETPAA----PGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALSAHPLLRNLGIEPFDTRFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|291333254|gb|ADD92963.1| formamidopyrimidine DNA glycosylase [uncultured archaeon MedDCM-OCT-S04-C140] Length = 305 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 121/312 (38%), Positives = 179/312 (57%), Gaps = 30/312 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ + N T+ ++ + R+ LR+ FP A G + + RRAKYL Sbjct: 1 MPELPEVETVRQGLLQGILNRTIEEVLIRREGLRYPFPKDL-ATIAGTTVTGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----------------------QHNH 98 LI+L+ + ++ HLGMSG + + A +H+H Sbjct: 60 LIDLDDDRVLLSHLGMSGRYTLFDADEASSAPRHLLTTVNGGVPVSSFGERTGYGGKHDH 119 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + T+ + R +Y DPRRFG +DL + P L LGPEP + + A L Sbjct: 120 LEFIFTDGS-----RAVYTDPRRFGIVDLFHRMEEPVQPLLEILGPEPF-DPWGAGDLAA 173 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +++K ALL+QK V G+GNIY CE+L RA LSP R+ R L++ NG P L L+ Sbjct: 174 ALMGRKTSIKLALLDQKTVVGVGNIYACESLHRAGLSPRREARGLVKKNGQPTQRLESLV 233 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQA 277 I+ VL +A+ +GGS+L D+ +DG++GYF + F+VYG+ GE C + CG ++RRIVQ+ Sbjct: 234 LHIKTVLEEALASGGSTLNDFASVDGTLGYFSHQFAVYGREGEACTKDGCGGVVRRIVQS 293 Query: 278 GRSTFYCTYCQK 289 RSTFYC+ CQ+ Sbjct: 294 NRSTFYCSSCQR 305 >gi|57117507|gb|AAW33970.1| MutM [symbiont bacterium of Paederus fuscipes] Length = 270 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ V + + + LR+ + G++I+ V RRAKYL Sbjct: 1 MPELPEVETIRRGIAPYLEGQRVNRVIIRERRLRWPISDNLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I HLGMSGS + + +H+HV I L + + Y DPR Sbjct: 61 LLRA-EVGTLINHLGMSGSLRLIESGLP----AKRHDHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGALLW--SQAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSVAVKPFIMDNTVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R ++ K +L EI+++L +AI+ GG++L D++ Sbjct: 169 GNIYASEVLFTAGIDPRRSAGNIS------KTRYSRLAGEIKRILANAIECGGTTLCDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC +CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KACGGTLREIRLGQRTSVYCPHCQR 270 >gi|283787732|ref|YP_003367597.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] gi|282951186|emb|CBG90879.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] Length = 269 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGAKILHAHVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQAD------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRRCQK 269 >gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] gi|189044668|sp|A5D0T6|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] Length = 276 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + + +T + + +R F KKI+ V RR KY Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLPKVIRSPELSEFKETIADKKILKVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI L ++ VHL M+G + CA +H HV +L+N ++ + D Sbjct: 61 LLINLSEGYTLAVHLRMTGRLVY----CAGQDPPARHTHVIFNLSNG-----CQLHFADM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T ++ LG EP + F +L + ++++ +K LL+Q +AG Sbjct: 112 RQFGRIWLVPTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+++P R +L + +L + I+ +L + I+ G+++RD+ Sbjct: 172 LGNIYADEALHRARINPERLATTLTPRE------IARLYRAIRDLLQEGIENRGTTVRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G +Q VY + G+PC CG I + GRS++YC CQK Sbjct: 226 IDGNGQAGNYQEFLQVYNREGKPC-PRCGDKIAKKKVGGRSSYYCPTCQK 274 >gi|296332104|ref|ZP_06874568.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675501|ref|YP_003867173.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150875|gb|EFG91760.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413745|gb|ADM38864.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 276 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYGLHQAEEPDDK----HVHVIFTMTDGT-----QLRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGLEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|153214741|ref|ZP_01949586.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|153800805|ref|ZP_01955391.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|153831394|ref|ZP_01984061.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] gi|124115177|gb|EAY33997.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|124123636|gb|EAY42379.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|148873126|gb|EDL71261.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] Length = 269 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQS------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|238789560|ref|ZP_04633344.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] gi|238722313|gb|EEQ13969.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] Length = 269 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLAGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKT-GWIIVHLGMSGSLRI----LSEETEPEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F YL + K + +K L++ KIV G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFTTNYLFEKSRNKRTVVKQWLMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL ++ + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPERAAGSLTESE------IARLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|321312442|ref|YP_004204729.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] gi|320018716|gb|ADV93702.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] Length = 276 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYGLHQAEEPDDK----HVHVIFTMTDGT-----QLRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|260877863|ref|ZP_05890218.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] gi|308089909|gb|EFO39604.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] Length = 269 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDA-GTAIVHLGMSGSLRVLDADFP----AAKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|171780160|ref|ZP_02921064.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281508|gb|EDT46943.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 273 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F + G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLIVGREIVSVDVRVPKMVKTDLSAFESDLLGQTIQSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ II HL M G +++ + H H+ L + + ++Y D R Sbjct: 61 LLNLDEQ-VIISHLRMEGKYLLFEHQVPEDK----HFHIFFGLDDGST-----LVYKDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV + Y R LGPEP F+ T + +K LL+Q +VAG+ Sbjct: 111 KFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R+ SL + + L EI ++L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKIHPERQANSLQKAE------INLLHDEIIRILQLGIKKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKT EPC C I +I GR T +C CQK Sbjct: 225 NALGENGTMQEYLQVYGKTDEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|296283099|ref|ZP_06861097.1| formamidopyrimidine-DNA glycosylase [Citromicrobium bathyomarinum JL354] Length = 271 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 165/289 (57%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + ++N T+T R ++R FP A G ++ + RRAK+ Sbjct: 1 MPELPEVETTVRGLALHLENRTITAARTARPDMRRPFPEGLEQALVGARVTSLGRRAKFG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ + +H+H+ I +N R NDPR Sbjct: 61 LIHTDRDQTLIFHLGMSGRWRIDP------EQPDRHDHLLIETESN------RFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV+T+ +P T+GPEP A +L + +K LL+Q+IVAG+ Sbjct: 109 RFGWVDLVDTAALDAWPSFVTMGPEPLGPDLTAAHLRAALAGRRQAIKLLLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRA++SP R + L +L+ I++VL +I GGS+LRDY Sbjct: 169 GNIYVCEALWRARISPKRAGGRVSLA------ALERLVTAIREVLEQSIRDGGSTLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G I RI Q GRST+YC CQ+ Sbjct: 223 RPDGELGYFSTRFDVYGRTGESCRREDGGHIARIEQGGRSTWYCPVCQR 271 >gi|83309731|ref|YP_419995.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] gi|82944572|dbj|BAE49436.1| Formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] Length = 308 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 161/294 (54%), Gaps = 20/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+ + V RRAKYL Sbjct: 30 MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 89 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G L ++ HLGMSG I + H+HV V DPR Sbjct: 90 VVRLDGGLVMLGHLGMSGRMTI---GALRNEPPGPHDHVEWVTDQG-----ISVTLTDPR 141 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E S +P L +GPEP D +F+A L K +K LL+QK+VAG+ Sbjct: 142 RFGLFALCEASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGL 201 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + + +L+ I+ VL +A+ AGGS+LRD+ Sbjct: 202 GNIYVCESLFRAEISPLRPAGSLSRAE------VGRLVPLIKAVLSEAVAAGGSTLRDHA 255 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYFQ++F VYG+ GE C CG I R+ QAGRSTFYC Q+ Sbjct: 256 RPDGELGYFQHSFQVYGREGETCPGCPGAPACGG-ILRMTQAGRSTFYCAKRQR 308 >gi|296876082|ref|ZP_06900136.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] gi|296432793|gb|EFH18586.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] Length = 274 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDLDAFRQDLPGQEIRVLGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + +H H+ T+ + ++Y D R Sbjct: 61 LFYL-TDLVLISHLRMEGKYFFYPDEVP----FRKHAHIFFHFTDGST-----MVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPEFIDSYFLTKKIGPEPTEADFKEQAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + +E VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTARE------AKAIRKETIAVLAQAVEKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|114326823|ref|YP_743980.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] gi|114314997|gb|ABI61057.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] Length = 300 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LRF P +A G + D RR KY+ Sbjct: 8 MPELPEVETVMRGLRARLEGRRIVRAEVRRPDLRFPLPPGLAARLTGAYVRDFRRRGKYI 67 Query: 61 LIELEGNLSIIVHLGMSGSFIIE---HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+ L+G S+++HLGMSG F++ T+ + + +H HV++ + Sbjct: 68 LMRLDGGDSLLIHLGMSGRFVLRAPADTTLPEGHEPERHEHVSMMAEDGWIA-----ALV 122 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG MDLV T+ + + L ++GPEP +++F L F + + +K ALL+Q+IV Sbjct: 123 DPRRFGMMDLVPTAAEDAHRLLSSMGPEPLEDAFCLSGLEKAFAGRRTAVKLALLDQRIV 182 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA ++P+R L + L +LI I++ L +AI AGGSSLR Sbjct: 183 AGLGNIYVSEALFRAGINPLRAAGDLSRAE------LRRLIPAIRETLTEAIAAGGSSLR 236 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSN------CGQMIRRIVQAGRSTFYCT 285 DYV DG +GYFQ+A+ VYG+ G+PC C I +IVQ GRST++C Sbjct: 237 DYVQPDGELGYFQHAWKVYGRAGQPCEHCPGLSAGCQG-IVQIVQGGRSTYFCP 289 >gi|84514657|ref|ZP_01002021.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] gi|84511708|gb|EAQ08161.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] Length = 283 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 115/294 (39%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM + ++R +LR+ FP + + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMTGQLIAKAEVNRPDLRWPFPENMADRLTGRRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG ++ + H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRILVSGAAQGAFYHPHPAPAKHDHVVLHMDGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T+ + + +R LGPEP N+F+ YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMPTAAQDDHWLIRDLGPEPLGNAFDETYLVARLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGIDPRRKAGQIAARR------VASLVPLIRDVLHEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G PC+ +C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHGFQVYDREGAPCVTPDCARPISRIVQSGRSSFFCAQCQR 283 >gi|262282702|ref|ZP_06060470.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] gi|262261993|gb|EEY80691.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] Length = 274 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVDKTIEQVQVRYAKMIGTGVDSFIHDLPGQAIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPSRPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I +GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLSGRGTHLCPHCQK 272 >gi|254286323|ref|ZP_04961282.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] gi|150423738|gb|EDN15680.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] Length = 269 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL + L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRLANSLSLDEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|116630047|ref|YP_815219.1| formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri ATCC 33323] gi|238853765|ref|ZP_04644131.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282851274|ref|ZP_06260639.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] gi|122273016|sp|Q041U1|FPG_LACGA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116095629|gb|ABJ60781.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri ATCC 33323] gi|238833574|gb|EEQ25845.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282557242|gb|EFB62839.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] Length = 276 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ ++ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPLSSAKA------IPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S CG ++ +I GR T +C +CQ Sbjct: 226 DANGEIGGYQKMLQVYGHAGEECSS-CGTILEKIKVNGRGTTFCPHCQ 272 >gi|238794405|ref|ZP_04638016.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] gi|238726306|gb|EEQ17849.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] Length = 269 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LIEL-PTGWIIVHLGMSGSLRILSDET----EAEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFSPQYLFDKSRNKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A L P R SL + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGLLPDRAAGSLTNAE------IVLLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|69246665|ref|ZP_00604055.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257878418|ref|ZP_05658071.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257882836|ref|ZP_05662489.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257889383|ref|ZP_05669036.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257894396|ref|ZP_05674049.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|258614817|ref|ZP_05712587.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium DO] gi|260560007|ref|ZP_05832185.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|293559953|ref|ZP_06676461.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|294623285|ref|ZP_06702150.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|314937781|ref|ZP_07845098.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|314941673|ref|ZP_07848553.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|314948921|ref|ZP_07852290.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] gi|314950961|ref|ZP_07854028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|314992963|ref|ZP_07858359.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|314996410|ref|ZP_07861453.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|68195139|gb|EAN09597.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257812646|gb|EEV41404.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257818494|gb|EEV45822.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257825743|gb|EEV52369.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257830775|gb|EEV57382.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|260073842|gb|EEW62166.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|291597313|gb|EFF28499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|291606041|gb|EFF35467.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|313589392|gb|EFR68237.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|313592486|gb|EFR71331.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|313596816|gb|EFR75661.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|313599564|gb|EFR78407.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|313642812|gb|EFS07392.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|313644711|gb|EFS09291.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] Length = 278 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + H HV + + ++ YND Sbjct: 61 LIFHLDHCE-LISHLRMEGKYQFTKENTPIDK----HTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|156936197|ref|YP_001440113.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ATCC BAA-894] gi|166215624|sp|A7MQ97|FPG_ENTS8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156534451|gb|ABU79277.1| hypothetical protein ESA_04096 [Cronobacter sakazakii ATCC BAA-894] Length = 269 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHA-LSDKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP ++FN YL + KK +K L++ K+V G+ Sbjct: 110 RFGAWLWTR--ELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|74316401|ref|YP_314141.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Thiobacillus denitrificans ATCC 25259] gi|90101322|sp|Q3SLR9|FPG_THIDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74055896|gb|AAZ96336.1| formamidopyrimidine-DNA glycolase [Thiobacillus denitrificans ATCC 25259] Length = 270 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + + LR+ P RG + ++RR KYL Sbjct: 1 MPELPEVETTRAGLSPRLQGRVLTRVIVREPRLRWPIPPDLDTQLRGLTLHGLARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +VHLGMSGS + + +H+HV + T + DPR Sbjct: 61 LFDFGAV-TQLVHLGMSGSLRLTEPAEP----AARHDHVDWRFDDGTI-----LRLRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E + +P L LGPEP +F+A YL Q ++ + +K +++ +V G+ Sbjct: 111 RFGAVLLTENAP--GHPLLAGLGPEPLSTAFDAAYLHTQCQRRKTAIKPLIMDAHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P L + +L I++VL AI AGGSSLRDYV Sbjct: 169 GNIYASESLFHAGIRPGVAAHRLSRA------ACARLADAIKQVLTAAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ VY + PC C IRRIVQA R++FYC CQ+ Sbjct: 223 QSSGELGYFQLQTRVYDREDAPC-RRCATPIRRIVQAQRASFYCPTCQR 270 >gi|261493056|ref|ZP_05989596.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496344|ref|ZP_05992739.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307988|gb|EEY09296.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311276|gb|EEY12439.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 274 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWAVSPELSQ-MAGAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + I+VHLGMSGS I S I +H+H+ + TN T + YNDPR Sbjct: 60 IIRTDK-GDILVHLGMSGSLRIL--SQTADIAFGKHDHIDLVTTNGTI-----LRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G+ Sbjct: 112 KFGCWLWAEKAEDHE--LLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTKKQ------CERLVKTIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG+ I V R+T++C CQ+ Sbjct: 224 QPDGKPGYFSQVLQVYGRKGEAC-NDCGKTIETKVIGQRNTYFCPKCQR 271 >gi|327483101|gb|AEA77508.1| Formamidopyrimidine-DNA glycosylase [Vibrio cholerae LMA3894-4] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFISRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|42519527|ref|NP_965457.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] gi|81703799|sp|Q74IB5|FPG_LACJO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41583816|gb|AAS09423.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] Length = 276 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKS------IPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638] gi|166988461|sp|A4W514|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSNEIHT-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEQE------CEILVKVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVASKHAQRATFYCRQCQK 269 >gi|153826318|ref|ZP_01978985.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] gi|254225706|ref|ZP_04919313.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|125621826|gb|EAZ50153.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|149739887|gb|EDM54074.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGNAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPCLH-CGEPICEQKIAQRNTFFCPQCQ 268 >gi|319788474|ref|YP_004147949.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] gi|317466986|gb|ADV28718.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] Length = 271 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ VT + L R +LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHVEGRRVTTVTLRRPDLRWPIPREVVEELPGRRIAAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + S ++HLGMSG + H+HV ISL + + + DPR Sbjct: 61 LLDTDRGDSALLHLGMSGMLRVLPPETPVNT----HDHVDISLDSGR-----VLRFTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ L+ LGPEP F+ +L + +++ +K L++Q+IV G+ Sbjct: 112 RFGCLLWQPAGTVHE--LLQDLGPEPLSGDFDGDWLYARSRGRSAPVKAFLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP+R + + L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISPLRAAGKVSRAR------YIALADAVKEILGYAITRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG+ GYF+ +VYG+ G PC CG +R R++ +C CQ+ Sbjct: 224 NPDGAPGYFEQELAVYGRGGLPC-PACGTPLREASIGQRTSAWCPRCQR 271 >gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus amyloliquefaciens TA208] Length = 276 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 154/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + N+ P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYGLHQADEPDDK----HVHVVFNMTDGT-----QLRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K SL + KL EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANSLSDGQ------IKKLHTEIKDTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 274 >gi|322385832|ref|ZP_08059475.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] gi|321270117|gb|EFX53034.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] Length = 274 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRIRYAKMIGTGVDAFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-EVLVSHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEPYFAARKLGPEPTDSEFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAQIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGIPIEKIKLGGRGTHLCPHCQK 272 >gi|188591113|ref|YP_001795713.1| formamidopyrimidine-DNA glycosylase [Cupriavidus taiwanensis LMG 19424] gi|238692929|sp|B2AGU2|FPG_CUPTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170938007|emb|CAP62991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase/ DNA lyase [Cupriavidus taiwanensis LMG 19424] Length = 290 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 145/296 (48%), Gaps = 15/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ A + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPGLEACLAHRLVRRIERRGKYL 60 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L+E + ++VHLGM+G+ + + + + + + Sbjct: 61 LLECISADAAQPPGWLLVHLGMTGTLRVLPEAPPPGMHDHFDLLLDAGPAPGMLADTIVL 120 Query: 115 IYNDPRRFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + DPRRFG + + +P L TLG EP D +F+ +L +++ +K LL Sbjct: 121 RFRDPRRFGAILWTTLPEAELASHPLLSTLGIEPFDPAFDGAWLHRHTRGRSAAIKTVLL 180 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 + IV G+GNIY E+L+RA + P L + +L Q ++ L AI+ G Sbjct: 181 SGAIVVGVGNIYASESLFRAGIRPTTAAGRLSRAR------CDRLAQAVRDTLAQAIERG 234 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+LRD+V DG+ GYFQ VY + G PC C +R+IVQ RSTFYC CQ Sbjct: 235 GSTLRDFVGSDGASGYFQLDCFVYDRAGLPC-RVCATPVRQIVQGQRSTFYCPKCQ 289 >gi|229524827|ref|ZP_04414232.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297581674|ref|ZP_06943596.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] gi|229338408|gb|EEO03425.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297534081|gb|EFH72920.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|197333929|ref|YP_002154899.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] gi|238690292|sp|B5FFG1|FPG_VIBFM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197315419|gb|ACH64866.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] Length = 273 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 145/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQK-LVGQRVQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ I+HLGMSGS + +H+HV + L N + YNDPR Sbjct: 60 MIDTPEGS-AIIHLGMSGSLRVLDEEVPS----AKHDHVDLVLENGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G+ Sbjct: 110 KFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P SL + T L+ EI+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAQIHPKTPVGSLKASQITV------LVAEIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ G+ C C I R++F+C CQ Sbjct: 222 QVDGKPGYFAQELKVYGRAGKEC-PVCSSKIEEEKIGQRNSFWCGKCQ 268 >gi|78486260|ref|YP_392185.1| formamidopyrimidine-DNA glycosylase [Thiomicrospira crunogena XCL-2] gi|123555019|sp|Q31EB2|FPG_THICR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78364546|gb|ABB42511.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Thiomicrospira crunogena XCL-2] Length = 280 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + ++ + I + LR+ G ++ + RRAKYL Sbjct: 1 MPELPEVETTRKGIQPKVEGQAIQKIIIRNGKLRWPVDPSLVEKLPGLVVLSIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +I+HLGMSG+ + + +H+H+ + L N + + Y+DPR Sbjct: 61 LLET-DQGHLIIHLGMSGNLRV----LPQHEPAVKHDHIDLLLENG-----FLLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + ++ L++LGPEP ++FNA YL + + + +K ++N +IV G+ Sbjct: 111 RFGSWLWTE-APIQEHSLLKSLGPEPLTDAFNAEYLFQKLQGRKTAIKTFIMNNQIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P R +SL T KL I+ VL AI+ GG++L+D++ Sbjct: 170 GNIYANESLFLSGIHPTRPAQSLTLTEAT------KLTAHIKTVLSAAIEQGGTTLKDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ +VYG+ PC C I ++V R+ ++C+ CQK Sbjct: 224 TPDGKPGYFEQKLNVYGRENLPC-PQCDSAIEKVVLNQRAAYFCSNCQK 271 >gi|114321796|ref|YP_743479.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] gi|122310767|sp|Q0A598|FPG_ALHEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114228190|gb|ABI57989.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] Length = 277 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ VT + + + LR+ P A G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPLLEGRRVTGMTVRQARLRWPVPAGLPDAITGQTIRAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--PIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L ++I+HLGMSGS + A + +H+HV + L + + + Y D Sbjct: 61 LFRTPA-GTLILHLGMSGSLRVIPGQQAGACAVPPGRHDHVDLRLADGSC-----LRYTD 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + L LGPEP D +F+ L + +++K +++ IV Sbjct: 115 PRRFGSLHWCT-GEPEAHWLLHRLGPEPFDTAFDGDRLHRLSRGRRTSVKAFIMDSGIVV 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P R + +L +++VL +AI AGG++LRD Sbjct: 174 GVGNIYASESLFRAGIHPGRPAGRVGLAR------YRRLAGAVREVLAEAIAAGGTTLRD 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF +VYG+ G PC CG+ IR+ A RST+YC CQ+ Sbjct: 228 FTASDGRPGYFAQTLNVYGRAGAPC-PRCGRSIRQRRIAQRSTWYCPGCQR 277 >gi|84386871|ref|ZP_00989895.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] gi|84378161|gb|EAP95020.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKIKSLTFRTPKLRWDIPQEL-KRLEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIET-DMGTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L GPEP + FNA Y++ + K+ +K +++ K+V G+ Sbjct: 110 RFGAWLWSAPDEIHTV--LLGSGPEPLTDDFNADYISEKAAKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +++ P+R + Q T L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRIHPLRPANKITQAEWT------LLTEEIKQVLATAIKQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC +I+ + R+TF+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEKC-PNCEALIQELKIGQRNTFFCEECQ 268 >gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTKT--LEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|256957262|ref|ZP_05561433.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|257077764|ref|ZP_05572125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294781290|ref|ZP_06746636.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|307267955|ref|ZP_07549343.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|256947758|gb|EEU64390.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|256985794|gb|EEU73096.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294451626|gb|EFG20082.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|306515596|gb|EFM84123.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|315032492|gb|EFT44424.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017] gi|315034274|gb|EFT46206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027] gi|315149640|gb|EFT93656.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012] gi|315174877|gb|EFU18894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346] gi|329577870|gb|EGG59291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467] Length = 280 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + KL Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VAKLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|325694808|gb|EGD36713.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK150] Length = 274 Score = 209 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + H HV T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDEVPERK----HAHVFFETTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|93279440|pdb|2F5N|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic1 gi|93279443|pdb|2F5O|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling G:c Base Pair Ic3 gi|93279446|pdb|2F5P|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic2 Length = 274 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|322374469|ref|ZP_08048983.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] gi|321279969|gb|EFX57008.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] Length = 274 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEVRYPKMIKTDLDEFRKEVPGRVIESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV I + + ++Y D R Sbjct: 61 LFYL-KDKVLISHLRMEGKYFYYPDQVPERK----HAHVLIHFEDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPIEQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|103488662|ref|YP_618223.1| formamidopyrimidine-DNA glycosylase [Sphingopyxis alaskensis RB2256] gi|123077974|sp|Q1GN82|FPG_SPHAL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|98978739|gb|ABF54890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingopyxis alaskensis RB2256] Length = 270 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 160/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ ++ + + R +LR FP + G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLVPFLEGQRLAAVTTFRPDLRRPFPVDLAQRLTGATVTRLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +I HLGMSG + E K H+H+ + +R+ +DPR Sbjct: 61 IVSTDRDDHMIFHLGMSGRWRTEGGEPGK------HDHLLLE-----TGAGHRLFLHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + TLGPEP + F+A L F + + +K LL+Q +VAG+ Sbjct: 110 RFGSIDLVAGDPLASFAAFVTLGPEPLSDDFDAALLARAFAARRAPVKAMLLDQNVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A++SP+ G PK L L+ I+ VL AI AGGS+LRD++ Sbjct: 170 GNIYVCEALNMARISPLMPAA------GVPKAKLAALVSAIRAVLTAAIAAGGSTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG I R+VQ+GRSTFYC CQ+ Sbjct: 224 SPDGDLGYFAKDWRVYGREGEACE--CGGAIVRVVQSGRSTFYCRKCQR 270 >gi|251791515|ref|YP_003006236.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] gi|247540136|gb|ACT08757.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] Length = 269 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGHTISYAEVRNARLRWPVSPEILS-LSDVPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-PTGWIIVHLGMSGSLRV----LPEYCEPEKHDHVDLIMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + F+ YL Q + + +K +++ K+V G+ Sbjct: 110 RFGAWLW--CDDPATSSVLAHLGPEPLSDDFSGDYLFKQSRGRKTPVKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGILPERLAGSLSQAEADQ------LAHSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC CG +I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRGGQPCHH-CGTLIDSIKQGQRSTFFCKRCQR 269 >gi|56476195|ref|YP_157784.1| formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] gi|81677551|sp|Q5P728|FPG_AZOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56312238|emb|CAI06883.1| Formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] Length = 271 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R + ++ T+T + + LR P + G+++ V RRAKYL Sbjct: 1 MPELPEVEITCRGIRPLVAGRTLTALEVRNPRLRQPVPADLAQTLVGERLQGVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + S++VHLGMSGS + H+HV + + DPR Sbjct: 61 LLD-FPHGSVLVHLGMSGSLRVVSADEP----AGVHDHVDLVF------GAEALRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L LG EP + F +L ++K L++ V G+ Sbjct: 110 RFGLVLWHA-GDGLSHPLLAALGREPLERGFTGAWLHEATRGVRLSIKQTLMDAHRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ ++ L +L+ +++ L+ AIDAGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLAPAGAIGPQR------LARLVASVRETLLAAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G C C +RR+V RSTF+C CQ+ Sbjct: 223 GGDGRAGYFQQQYFVYGREGLAC-RVCATPVRRVVIGQRSTFFCPRCQR 270 >gi|327460965|gb|EGF07298.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1057] Length = 274 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDRFVHDLPGQTIEMIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLVSHLRMEGKYLFYPDEVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLFPPFAAALSCSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R +L + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADNLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|307704700|ref|ZP_07641599.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] gi|307621747|gb|EFO00785.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] Length = 274 Score = 209 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEIRYPKMIKTDLNEFQKELPGQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFY----YPYQVPERKHAHVFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPSEQDFDVQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQECV-RCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|188532230|ref|YP_001906027.1| formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] gi|238689742|sp|B2VF70|FPG_ERWT9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|188027272|emb|CAO95115.1| Formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] Length = 269 Score = 209 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSPEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPA-GWIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP +SF+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CTDLDASSVLSHLGPEPLSDSFSASYLFEKSRGKRTAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEAE------AGLLVSTIKGVLMRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RKCAMPIESSKHGQRSTFFCRRCQK 269 >gi|261346782|ref|ZP_05974426.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] gi|282565180|gb|EFB70715.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] Length = 269 Score = 209 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + +K++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTIAYTIVRNSRLRWPVSEQI-KSLADEKVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + H+HV + L + + Y DPR Sbjct: 60 LIELNK-GWIIVHLGMSGSVRILTEELPEEK----HDHVDLILGDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP + FN YL K+ +K L++ K+V G+ Sbjct: 110 RFGAWLWCE--DLDTSSVLAHLGPEPLSDEFNPQYLFDLAKKRKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +K+SP + L + + +L+++I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFASKISPEKMVNQLTLAD------ITELVKQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC S CG I I Q R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPC-SMCGTHIESIKQGQRTTFYCPQCQK 269 >gi|260779657|ref|ZP_05888547.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] gi|260604466|gb|EEX30770.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 209 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D PH G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLAGQTVAKLTFRTPKLRWDIPHELKK-MEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + ++ +H+HV + LTN + YNDPR Sbjct: 60 LIETDVGS-AIVHLGMSGSLRVLDAD----MEPGKHDHVDLKLTNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L +GPEP F+A Y+ + K +K +++ K V G+ Sbjct: 110 RFGAWLWTEDGE---HDALGHMGPEPLTEDFDAQYIADKAKNKRVAVKQFIMDNKAVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R +L +L++EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRSAGTLTAKEW------QRLVKEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK GE C +CG+ I R+TF+C +CQK Sbjct: 221 QADGKPGYFAQELQIYGKAGEAC-PSCGEAIEEQKIGQRNTFFCRHCQK 268 >gi|148557778|ref|YP_001265360.1| formamidopyrimidine-DNA glycosylase [Sphingomonas wittichii RW1] gi|166198754|sp|A5VG06|FPG_SPHWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148502968|gb|ABQ71222.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingomonas wittichii RW1] Length = 270 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + R +LR FP G I + RRAKY Sbjct: 1 MPELPEVETTVRGLRPPLEGRRLTRVETRRADLRRPFPADLRQRMTGATITGLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + ++ HLGMSG + I+ + + H+H+ + + DPR Sbjct: 61 LIETDRGDVMVFHLGMSGRWRIDPS------EIGAHDHLVLETDEGRT-----LSLCDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + P + LGPEP +L + + +K LL+Q+IVAG+ Sbjct: 110 RFGSVDLVRGEELAGFGPFKALGPEPLGPDLTGAHLAGALEGRVAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL ++P + + L +L+ I++VL AI+AGGS+LRDY Sbjct: 170 GNIYVCEALHMTGIAPTTMAGRIAKKR------LDRLVDSIREVLAAAIEAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +IRR V GRSTFYC CQK Sbjct: 224 RPDGELGYFAKQWRVYGREGEPCH--CGTVIRRRVDGGRSTFYCPKCQK 270 >gi|269959363|ref|ZP_06173746.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] gi|269835800|gb|EEZ89876.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] Length = 269 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDE-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLSNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAVLG--HMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKEW------QLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG+ ++ R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGETC-PECGEALQEQKIGQRNTFFCNVCQQ 269 >gi|319946541|ref|ZP_08020776.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] gi|319747287|gb|EFV99545.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] Length = 274 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRLGLEKLILGKTIQSVEVKYPKMIQTDLDAFRQDLPGQEIRAMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + H HV T+ + ++Y D R Sbjct: 61 LFYL-TDLVLISHLRMEGKYFFYPDEVPLRK----HAHVFFHFTDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPEFIDSYFLAKKIGPEPTEADFKEPAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + + +E VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTARE------VKAIRKETIAVLAQAVEKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|207727840|ref|YP_002256234.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] gi|206591081|emb|CAQ56693.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] Length = 288 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 146/300 (48%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + A H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEVPAA----PGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMHARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|21730426|pdb|1K82|A Chain A, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730427|pdb|1K82|B Chain B, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730428|pdb|1K82|C Chain C, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730429|pdb|1K82|D Chain D, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna Length = 268 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR + + T+ + LR+ + ++ V RRAKYLL Sbjct: 1 PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYLL 59 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +EL II+HLGMSGS I + + +H+HV + ++N + Y DPRR Sbjct: 60 LELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPRR 109 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + + L LGPEP + FN YL + KK + +K L++ K+V G+G Sbjct: 110 FGAWLWTK--ELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVG 167 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 NIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFLQ 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 SDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 268 >gi|146309211|ref|YP_001189676.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina ymp] gi|166198733|sp|A4Y028|FPG_PSEMY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145577412|gb|ABP86944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas mendocina ymp] Length = 270 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E +I HLGMSGS + +H HV I L + + Y DPR Sbjct: 61 LIKAEAGS-LIGHLGMSGSLRLVECGLV----AAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGALLWCE--DPLRHELLARLGPEPLGGLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRARYL------RLAEEIKRILAHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRAGEFC-KVCGTTLREVKLGQRASVYCPRCQR 270 >gi|329667766|gb|AEB93714.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii DPC 6026] Length = 276 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE ++R L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVKRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKS------IPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] Length = 274 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++K + + + + L + P F G ++IDV RR KY Sbjct: 1 MPELPEVETVVRGLKELIKGVKINKVIIRETKLLVYPDPDTFIDLVEGSRVIDVLRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI+L+ N ++ HL M+G ++ + K +H H L + + + +N+ Sbjct: 61 ILIKLDNNRFLVFHLKMTGQLVV----YERNNKYDKHTHFVFELEDGRD-----LRFNNM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV + L LGPEP + F ++ N+K LLNQK +AG Sbjct: 112 RKFGRVYLVTKGEFDKAGSLADLGPEPLSDEFTVDEFADIIKRRKGNIKGLLLNQKFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A +SP RK SL + + +L I+KVL I GG+S++DY Sbjct: 172 LGNIYADEALFEAGISPERKADSLDDSE------IERLYHAIRKVLKMGIKYGGTSMKDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G IG FQN VY KTGE C+ NCG I++ V GRS+ YC CQK Sbjct: 226 VNARGRIGEFQNKLKVYRKTGEECV-NCGHEIQKKVIRGRSSHYCPGCQK 274 >gi|238760449|ref|ZP_04621587.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] gi|238701344|gb|EEP93923.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] Length = 269 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELVT-GWIIVHLGMSGSLRI----LSEETEAAKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSSVLAHLGPEPLGDEFTADYLFDKSRSKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL K +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTASILPERAAGSLT------KIEAIQLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|170766560|ref|ZP_02901013.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] gi|170123998|gb|EDS92929.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] Length = 269 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RSSNQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEERPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTR--ALEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLVRMIKTVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|229527276|ref|ZP_04416669.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] gi|229335284|gb|EEO00768.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] Length = 269 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAYSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL CG++I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPCLH-CGELICEQKIAQRNTFFCPQCQ 268 >gi|260599932|ref|YP_003212503.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cronobacter turicensis z3032] gi|260219109|emb|CBA34464.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis z3032] Length = 269 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHA-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP ++FN YL + KK +K L++ K+V G+ Sbjct: 110 RFGAWLWTR--ELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 222 QSDGKPGYFAQQLQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|228999366|ref|ZP_04158945.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] gi|229006921|ref|ZP_04164551.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228754321|gb|EEM03736.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228760311|gb|EEM09278.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] Length = 276 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TKYVIVSHLRMEGKYLLHKDDEPVDK----HTHVRFQFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|306829344|ref|ZP_07462534.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] gi|304428430|gb|EFM31520.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] Length = 274 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVDIRYPKMIKTDLEEFQKELAGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LYYL-TDKVLISHLRMEGKYFYYSDQVPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAS------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|227534793|ref|ZP_03964842.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187549|gb|EEI67616.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 295 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 14 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 74 LMRLSNGETIISHLRMEGRYYVVKDANTPFDK---HDHVTFTFQDGS-----QLRYRDLR 125 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 126 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 185 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 186 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 239 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 240 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 286 >gi|194445857|ref|YP_002042976.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693550|sp|B4SXD7|FPG_SALNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194404520|gb|ACF64742.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 269 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L Q I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAE------CDLLAQVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|209693776|ref|YP_002261704.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|209693803|ref|YP_002261731.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007727|emb|CAQ77843.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007754|emb|CAQ77873.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] Length = 272 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + + LR+ P G++I + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQK-LVGQRIQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+HLGMSGS I + I +H+HV + L + + YNDPR Sbjct: 60 MIDTPE-GTAIIHLGMSGSLRILD----EAIPTAKHDHVDLVLDSGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + L LGPEP + FN YL + K +K ++N IV G+ Sbjct: 110 KFGAWLYSEVG--VSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK++P +L + +L+ +I+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAKINPKAPVGTLTLAQ------IERLVSDIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ GE CL C +I+ R+TF+C CQ Sbjct: 222 QVDGKPGYFAQELQVYGRAGEACL-ICQSLIQEQKIGQRNTFWCEKCQ 268 >gi|320157663|ref|YP_004190042.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] gi|319932975|gb|ADV87839.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] Length = 269 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGS-AIVHLGMSGSLRVLDADFP----AGKHDHVDLKLSNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V + +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYVAPGEDHDVLG--NIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEEW------QRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|152976968|ref|YP_001376485.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025720|gb|ABS23490.1| formamidopyrimidine-DNA glycosylase [Bacillus cytotoxicus NVH 391-98] Length = 276 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTMKDVIVTYPKLVKRPDDAELFKELLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G + + + H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKYFLCKSDDPVDK----HTHVRFQFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y+ PL LGPEP D YL + K N +K ALL+Q+++ Sbjct: 111 VRKFGTMHLFTKGEEYKEMPLADLGPEPFDPELTVEYLQKKLQKTNRKIKVALLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL +N + K+ L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIYPEREASSLAKNE------IEKIHAATVATLTEAVKRGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQN +VYGK GEPC++ CG I +IV GR T YC +CQ Sbjct: 225 YINSQGEIGSFQNLLNVYGKKGEPCVT-CGTAIEKIVVGGRGTHYCPHCQ 273 >gi|313891294|ref|ZP_07824912.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] gi|313120361|gb|EFR43482.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] Length = 273 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVVGKCIESVTVKVPKMIVSNPETFAGDLAGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I HL M G +++ + + H HV + + ++Y D R Sbjct: 61 IFRFSDLLMI-SHLRMEGKYLLFEGAVPENK----HFHVFFHFRDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F ++K LL QK+VAG+ Sbjct: 111 KFGTLELIARDGLDLYFSQRKLGPEPTKNEFKLKIFETALRLSKKSIKPLLLEQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P+R L + + ++ + +L AID GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLAADLKKAE------IKRIHDQTVAILAFAIDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T YC CQK Sbjct: 225 NTLGMDGSMQDYLQVYGQTGKPC-PRCGSAILKLKVGGRGTHYCPKCQK 272 >gi|48474241|sp|Q9X981|FPG_SERMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16445331|gb|AAD28805.2| Fpg [Serratia marcescens] Length = 271 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 143/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + +H+HV + + N + Y DPR Sbjct: 60 LIEL-ERGWIIVHLGMSGSLRMLREENED--EAGKHDHVDLVINNG-----MILRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +FN YL + K + +K L++ K+V G+ Sbjct: 112 RFGAWLWCE--DLATSSVLAHLGPEPLSEAFNGDYLYEKSRNKRTLIKPWLMDNKLVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L + I+ VL +I+ GG++LRD++ Sbjct: 170 GNIYASESLFSAGILPDRPAGSLTKAE------AALLAKTIKAVLQRSIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 224 QSDGKPGYFAQELQVYGRAGEPC-RTCGTPIESAKHGQRSTFFCRRCQR 271 >gi|50119109|ref|YP_048276.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] gi|81693474|sp|Q6DAV4|FPG_ERWCT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49609635|emb|CAG73068.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] Length = 269 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTILYAEVRNARLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS I + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-THGWIIVHLGMSGSLRI----LPEYSEPEKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T L LGPEP + F A YL K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--TDSLETSSVLAHLGPEPLEAEFFADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNENDADV------LVRVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQ 268 >gi|229543561|ref|ZP_04432621.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] gi|229327981|gb|EEN93656.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] Length = 277 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L ++ T+ + + + F+ A G+ I + RR K Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ + +++ HL M G + + + +H H+ + + Y D Sbjct: 61 FLIFYT-DHYALVSHLRMEGRYRVYDQNEP----VEKHTHMIFHFQSGK-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP ++F YL Q K N+K+ LL+Q +++ Sbjct: 111 VRKFGTMHLFLKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQTVIS 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L+RA + P RK +SL + + ++ L EI + L +A++ GGS++R Sbjct: 171 GLGNIYVDESLFRAHIYPERKAKSLTKKD------VHLLHSEIIQTLQEAVEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ GEPC CG I ++V AGR T YC CQK Sbjct: 225 YVNSQGQMGMFQLELYVYGRKGEPC-RKCGTPIEKMVTAGRGTHYCPNCQK 274 >gi|301066753|ref|YP_003788776.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] gi|300439160|gb|ADK18926.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] Length = 282 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDASTPFDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREDTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|37528666|ref|NP_932011.1| formamidopyrimidine-DNA glycosylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39931200|sp|Q7MY36|FPG_PHOLL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|36788105|emb|CAE17229.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 269 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ + RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMK-LSDQLVLSIQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL N IIVHLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LIEL-ANGWIIVHLGMSGSLRI----LPEERPAEKHDHVDLVMADGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SDDLERCSVLAHLGPEPLSDDFNGFYLYTRSSNKKTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++L + + L + I+KVL +I+ GG++LRD++ Sbjct: 168 GNIYANEALFTAHIQPDRPAQTLTERE------AHLLAETIKKVLQRSIERGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG+ I I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRAGEPC-RICGEQIESIKLGQRSTFFCRHCQ 268 >gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] gi|238066645|sp|B5XTG8|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] Length = 269 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTKT--LEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|307706468|ref|ZP_07643277.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] gi|307618178|gb|EFN97336.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] Length = 274 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDLDQFQKELPGQVVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + + HL M G + + H H+ + ++Y D R Sbjct: 61 LFYL-TDKVLTSHLRMEGKYFYYPDQVPERK----HAHIFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDVQVFQAALTKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + +I VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQIIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|322389988|ref|ZP_08063527.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] gi|321143301|gb|EFX38740.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] Length = 288 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDLDAFCQDLPGQEIRVMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + H HV T+ + ++Y D R Sbjct: 75 LFYL-TDLVLISHLRMEGKYFFYPDEVPLRK----HAHVFFHFTDGST-----LVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 125 KFGTMEVLIPELVDSYFLAKKIGPEPTEADFKEPAFQVALKKSKKPIKSALLDQKLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + E VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLYRAKVHPARLGQSLTARE------AKAIRNETIAVLAQAVEKGGSTIRSYS 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 239 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 286 >gi|157150267|ref|YP_001450016.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] gi|157075061|gb|ABV09744.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] Length = 274 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVMVSHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL+Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFVAALSRSKKPIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWR ++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRVRIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGNPIEKIKLGGRGTHLCPHCQK 272 >gi|293556213|ref|ZP_06674803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] gi|291601632|gb|EFF31894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] Length = 278 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLKRLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H HV + + ++ YND Sbjct: 61 LIFHL-DHYELISHLRMEGKYQFTKENTP----IDKHTHVLFFFEDGS-----QLRYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG +I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTLIVKTKVAQRGTHYCPNCQR 273 >gi|77919460|ref|YP_357275.1| formamidopyrimidine-DNA glycosylase [Pelobacter carbinolicus DSM 2380] gi|90101308|sp|Q3A3F2|FPG_PELCD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77545543|gb|ABA89105.1| DNA-(apurinic or apyrimidinic site) lyase [Pelobacter carbinolicus DSM 2380] Length = 271 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + V + + + LR+ P + SA G V RRAKYL Sbjct: 1 MPELPEVETIRRGISPWVIDQKVVAVVVRQPRLRWPVPSNLSACLVGYAFSGVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS I + H+HV I+L + + NDPR Sbjct: 61 LL-PNPAGCLLIHLGMSGSLRIVPSDTP----PAAHDHVDIALESGR-----TLRLNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +E + L LGPEP F L + + +KN +++Q+IV G+ Sbjct: 111 RFGAVLWIE-GRPEDHALLAHLGPEPFAVEFTGAMLYARSRGRKLAVKNFIMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P+R + + L + +++VL AI+AGG++LRD+ Sbjct: 170 GNIYASEALYRAGIHPMRAAGRVSRRR------YAALAEAVRQVLTAAIEAGGTTLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYF VYG+ G+PC+ CG+ IR RS+++CT CQ+ Sbjct: 224 DENGRPGYFSQRLLVYGREGQPCVH-CGRPIRCETIGQRSSYFCTRCQR 271 >gi|325982090|ref|YP_004294492.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] gi|325531609|gb|ADZ26330.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] Length = 276 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 157/289 (54%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + ++ + LR+ P + A G I V+RRAKYL Sbjct: 1 MPELPEVETTGRGIAPHVTGQVIANVIIRNSMLRWPIPENLPALLPGLTIQTVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L++ G ++I HLGMSGS + + + P+ H+H + L N T + +DP Sbjct: 61 LLD-CGKGALIFHLGMSGSLRVLLPELIQLPEFPRKHDHFDLILNNQT-----VLRLHDP 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + Q+P L LGPEP F+A YL + + +K L+N +IV G Sbjct: 115 RRFGAVLWH-VGNIAQHPLLMNLGPEPLTADFSAQYLFRETRGLRACIKQTLMNSRIVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A ++P KL+Q ++ L AI+AGGSSLRD+ Sbjct: 174 IGNIYANEALYLAGINPKVTAGR------IGIGRYEKLVQAVKHTLQLAIEAGGSSLRDF 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VH DG+ GYFQ + VYG++G+ C C +I++I Q RS+FYC+ CQ Sbjct: 228 VHSDGTRGYFQQQYWVYGRSGKRC-KQCSNIIKQIKQGQRSSFYCSGCQ 275 >gi|229521061|ref|ZP_04410482.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] gi|229341946|gb|EEO06947.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] Length = 269 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 146/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + + + R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AARHDHVDLVMASGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|327534460|gb|AEA93294.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF] Length = 280 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|228993313|ref|ZP_04153229.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] gi|228766381|gb|EEM15024.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TKYVIVSHLRMEGKYLLHKDDEPVDK----HTHVRFQFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKRGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|24379994|ref|NP_721949.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] gi|26006954|sp|P55045|FPG_STRMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24377981|gb|AAN59255.1|AE014992_10 putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] Length = 273 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ H H+ L + ++Y D R Sbjct: 61 LLNLNRQ-TIISHLRMEGKYLLFEDEVPDNK----HFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R K + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQ------LKKSEIKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|332358992|gb|EGJ36813.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK49] Length = 274 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQMDLDAFRQDLLGQEIRSMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLESYFAARKLGPEPTEADFLLEPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADSLKPAE------VKQLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGHPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|257086218|ref|ZP_05580579.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|256994248|gb|EEU81550.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|315027065|gb|EFT38997.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137] Length = 280 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLSGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWHAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|320547275|ref|ZP_08041567.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] gi|320448079|gb|EFW88830.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] Length = 273 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + I + + F G+ + R KYL Sbjct: 1 MPELPEVETVRRGLERLIVGRKIVSIDVRVPKMIKTDLTAFETDIIGQTFQSIGRCGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ II HL M G +++ + H H L N + ++Y D R Sbjct: 61 LLNLDRQ-VIISHLRMEGKYLLFEDEVPENK----HFHTFFKLDNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG MDL+E Y R LGPEP + +F+ Q +K LL+Q +V G+ Sbjct: 111 KFGTMDLLEKEQVADYFRQRKLGPEPTETAFDLATFAKQLKASKKVIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L I ++L I GGS++R Y Sbjct: 171 GNIYVDEALWAAKIHPKRTSDSLSDSE------ISLLRDSIIRILQLGIAKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTGEPC C I +I GR T +C CQK Sbjct: 225 NALGENGSMQDFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|257081124|ref|ZP_05575485.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] gi|256989154|gb|EEU76456.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] Length = 280 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHKADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|328471759|gb|EGF42636.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio parahaemolyticus 10329] Length = 269 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN+ + YNDPR Sbjct: 60 LIETDA-GTAIVHLGMSGSLRVLDADFP----AAKHDHVDLKLTNSK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|238750803|ref|ZP_04612301.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] gi|238710947|gb|EEQ03167.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] Length = 269 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSEEILS-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKT-GWIIVHLGMSGSLRILSSET----EAEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDDFTAEYLFEKSRNKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL ++ + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTARILPDRAAGSLTESE------ITRLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG ++ RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHLVEIAKHGQRSTFFCRHCQ 268 >gi|200388222|ref|ZP_03214834.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605320|gb|EDZ03865.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 269 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|114778708|ref|ZP_01453520.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] gi|114551070|gb|EAU53632.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] Length = 271 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++R L + + + HR +LR+ P S G +I+ V RR+KYL Sbjct: 1 MPELPEVEVVRTGLEPCLIGRRILTVTCHRPSLRYPLPDMGS--LSGSRIVAVRRRSKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE+ ++ HLGM+G F + + + +H HV I L + T+ + Y D R Sbjct: 59 LIEVSDGRVLVWHLGMTGQFHVLGSEVS----AGKHEHVRIDLDDGTS-----LRYRDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG+ L+ ++P TLGPEP ++FN YL + + +K +++ +V G+ Sbjct: 110 RFGYAGLLAADQLAEHPWFATLGPEPLGDAFNGAYLAELCRGRKAPIKTVIMDAHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R + L L I+ VL +AI AGGS++ D+V Sbjct: 170 GNIYAAESLFRAGIHPGRAAGRIAGAR------LDLLASSIRDVLREAISAGGSTISDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +AF VYG+ G+PCL CG+ IRRI Q+GRS+FYC CQ Sbjct: 224 RADGRPGYFAHAFQVYGRKGQPCL-VCGEGIRRIQQSGRSSFYCIRCQ 270 >gi|83746559|ref|ZP_00943609.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|207742244|ref|YP_002258636.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] gi|83726693|gb|EAP73821.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|206593632|emb|CAQ60559.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] Length = 288 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + A H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEVPAA----PGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------CAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG +IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTLIRQIVQGQRSTFYCPVCQR 288 >gi|238754767|ref|ZP_04616119.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] gi|238707075|gb|EEP99440.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] Length = 269 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHNIQYAIVRNARLRWPVSDEILA-LSDQLVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + L+N + Y DPR Sbjct: 60 LLEL-PRGWIIIHLGMSGSLRI----LPEETEAEKHDHVDLVLSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG S L LGPEP +F+A YL K + +K L++ K+V G+ Sbjct: 110 RFGAWLWA--SDLTTSSVLAHLGPEPLSEAFSASYLFSLSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R SL + L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGISPERPAGSLTEPE------AELLVTTIKRVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIESARHGQRSTFFCRNCQ 268 >gi|307709150|ref|ZP_07645609.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] gi|307620096|gb|EFN99213.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] Length = 274 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L ++ ++ I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETIRRGLEKLILGKKISSIEIRYPKMIKTDLDEFQKEVPGQIIESMERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP+ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPSKQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|324991455|gb|EGC23388.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK353] Length = 274 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFHLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFQMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|312864546|ref|ZP_07724777.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] gi|311099673|gb|EFQ57886.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] Length = 273 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T+ + + L F G+ + + RR KYL Sbjct: 1 MPELPEVENVRRGLERQILGKTIKTVKVTYPKLVRTGVEDFQLLLPGQTVQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL G L I HL M G + + H H + T+ T ++Y D R Sbjct: 61 IFELTGGLII-SHLRMEGKYFLFSDQLPTNK----HFHAFFTFTDGTT-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+ + S + Y + LGPEP +F + + +K+ LL+Q +VAG+ Sbjct: 111 KFGTMEYLPKSQEAAYFLSKKLGPEPTKETFKLAPFERTLVESHRPIKSYLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW AK+ P R++ SL + +L + ++L + I GGS++R Y Sbjct: 171 GNIYADEVLWAAKVHPERRSDSLRPAE------IKRLHDQTIRILQEGIKRGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ GE C S CG I +I GR + YC CQK Sbjct: 225 NTLGEDGSMQDFLEVYGREGELC-SRCGSTIEKIKVGGRGSHYCPKCQK 272 >gi|229546724|ref|ZP_04435449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256854275|ref|ZP_05559639.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|307275296|ref|ZP_07556439.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|307290894|ref|ZP_07570784.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|229308073|gb|EEN74060.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256709835|gb|EEU24879.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|306497964|gb|EFM67491.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|306507930|gb|EFM77057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|315029748|gb|EFT41680.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000] Length = 280 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQIALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|94499877|ref|ZP_01306413.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] gi|94428078|gb|EAT13052.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] Length = 278 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + G ++ V RRAKYL Sbjct: 1 MPELPEVETTRAGIEPHIIGHQIKAFHVRQPQLRWPIPTELATLLTGNRVQAVRRRAKYL 60 Query: 61 LIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 LI+ + ++I+HLGMSGS + + +H H I + V Sbjct: 61 LIDIAAGKSEDLLGTLIIHLGMSGSLRVINA--KPYPDPKKHEHFDIEFDD------CLV 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +NDPRRFG L+ LGPEP ++FN Y+ + ++S +K +++Q Sbjct: 113 RFNDPRRFGACLWQAADEVDSR--LQHLGPEPLSDTFNGDYIFAKSRGRSSAIKTFIMDQ 170 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +IV G+GNIY E+L+ A ++P + + K +L+ I+ VL +AI GG+ Sbjct: 171 RIVVGVGNIYASESLFLAGINPKKAAGKVS------KKKYQELVSAIKIVLDNAIAQGGT 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD+ DG GYF VYG+ G C+ C Q I++IVQ RSTFYCT CQ+ Sbjct: 225 TLRDFTSSDGKAGYFAQELRVYGREGLGCI-QCQQPIKQIVQGQRSTFYCTKCQR 278 >gi|323466098|gb|ADX69785.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus H10] Length = 276 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTISDAPKDK----HDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P+ + P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHPLSQANK------IPAEKVIELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|227892836|ref|ZP_04010641.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] gi|227865338|gb|EEJ72759.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] Length = 276 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLVKGKTIKKVILWYPKIVATDHDKFVEELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKDK----HDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP + F+ Y +K N+KN LL+Q+ VAG+ Sbjct: 112 KFGRMQLILTGTERQITGIGKLGPEPNSSEFSEQYFIDSLKRKKKNIKNTLLDQRTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P+ P++ + +L Q I + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHPLSAANK------IPEEKVKQLRQNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG GE CL CG ++ +I +GR T +C +CQ Sbjct: 226 DANGKTGGYQKMLKVYGHAGEKCLK-CGTILEKIKVSGRGTTFCPHCQ 272 >gi|29375464|ref|NP_814618.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227554990|ref|ZP_03985037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229548815|ref|ZP_04437540.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255971331|ref|ZP_05421917.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255973950|ref|ZP_05424536.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256761635|ref|ZP_05502215.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256960004|ref|ZP_05564175.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256964300|ref|ZP_05568471.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|257083793|ref|ZP_05578154.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|257089290|ref|ZP_05583651.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257415443|ref|ZP_05592437.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis AR01/DG] gi|257418474|ref|ZP_05595468.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257421125|ref|ZP_05598115.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|293383757|ref|ZP_06629664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|293388767|ref|ZP_06633260.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|307271879|ref|ZP_07553147.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|307278425|ref|ZP_07559500.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|312904439|ref|ZP_07763598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|312907027|ref|ZP_07766023.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|312952853|ref|ZP_07771715.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|312978715|ref|ZP_07790442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|39931263|sp|Q837G3|FPG_ENTFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29342924|gb|AAO80688.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227175872|gb|EEI56844.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229306044|gb|EEN72040.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255962349|gb|EET94825.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255966822|gb|EET97444.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256682886|gb|EEU22581.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256950500|gb|EEU67132.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256954796|gb|EEU71428.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|256991823|gb|EEU79125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|256998102|gb|EEU84622.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257157271|gb|EEU87231.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG] gi|257160302|gb|EEU90262.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257162949|gb|EEU92909.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|291078833|gb|EFE16197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|291081924|gb|EFE18887.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|295113920|emb|CBL32557.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterococcus sp. 7L76] gi|306504931|gb|EFM74126.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|306511385|gb|EFM80387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|310627012|gb|EFQ10295.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|310629369|gb|EFQ12652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|310632137|gb|EFQ15420.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|311288422|gb|EFQ66978.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|315145153|gb|EFT89169.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141] gi|315148037|gb|EFT92053.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244] gi|315152952|gb|EFT96968.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031] gi|315155182|gb|EFT99198.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043] gi|315157510|gb|EFU01527.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312] gi|315163061|gb|EFU07078.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645] gi|315167986|gb|EFU12003.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341] gi|315171782|gb|EFU15799.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342] gi|315574208|gb|EFU86399.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B] gi|315577338|gb|EFU89529.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630] gi|315581649|gb|EFU93840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A] gi|323480060|gb|ADX79499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62] Length = 280 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|270265225|ref|ZP_06193487.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] gi|270040859|gb|EFA13961.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIEL-DHGWIIVHLGMSGSLRM----LAEETEAGKHDHVDLVISNG-----MTLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +F YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWCE--DLANSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L++ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAASLSKTE------AELLVETIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIESAKHGQRSTFFCRRCQR 269 >gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-LLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTRT--LEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|95929141|ref|ZP_01311885.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] gi|95134639|gb|EAT16294.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] Length = 272 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ + D+ ++ LR+ P + G+ ++ + RRAKYL Sbjct: 1 MPELPEVETVCAGLHDLVVGQQIVDVRVYESRLRYPVPMELADVLSGETVVSLRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+++ +I+HLGMSGS +H+HV I + + ++DPR Sbjct: 61 LMDIGPQ-VVILHLGMSGSLRWVSDG----QTPQKHDHVDIVFSGG------CLRFHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+ L LGPEP + F+ +L + + +K+ L+ ++V G+ Sbjct: 110 RFGLIVLAPPP-VEQHRLLAHLGPEPLSDDFDGQWLFEKSRGRRIAIKSLLMENRVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + ++P + + L L+ +I+KVL +AI AGG++L+D+V Sbjct: 169 GNIYANESLFLSGMAPKKTSGELTDQQCVI------LVDKIKKVLAEAIKAGGTTLQDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ VYG+ +PCL CG MI R RSTFYC CQK Sbjct: 223 NGHGQPGYFQQKLYVYGRDEQPCL-ICGTMIERCRIGQRSTFYCPECQK 270 >gi|161507869|ref|YP_001577833.1| formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260103164|ref|ZP_05753401.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|172048344|sp|A8YWE6|FPG_LACH4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160348858|gb|ABX27532.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260083023|gb|EEW67143.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|328464767|gb|EGF36085.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus helveticus MTCC 5463] Length = 276 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTSDAPKDK----HDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P+ + P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHPLSQANK------IPAEKVMELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|145601093|ref|YP_001165169.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] gi|166198758|sp|A4TSD4|FPG_YERPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145212789|gb|ABP42196.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] Length = 278 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PKGWIIIHLGMSGSLRVLSEETA----AEKHDHVDLVVSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|22124009|ref|NP_667432.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis KIM 10] gi|45439918|ref|NP_991457.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51594407|ref|YP_068598.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108809481|ref|YP_653397.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|108813958|ref|YP_649725.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Nepal516] gi|150260884|ref|ZP_01917612.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|153948540|ref|YP_001399065.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162418456|ref|YP_001604698.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165926106|ref|ZP_02221938.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936106|ref|ZP_02224675.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|166011428|ref|ZP_02232326.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213712|ref|ZP_02239747.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402103|ref|ZP_02307580.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419226|ref|ZP_02310979.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426672|ref|ZP_02318425.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469342|ref|ZP_02334046.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis FV-1] gi|170026359|ref|YP_001722864.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186893395|ref|YP_001870507.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|218927273|ref|YP_002345148.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|229836165|ref|ZP_04456333.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|229839901|ref|ZP_04460060.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841983|ref|ZP_04462138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229904488|ref|ZP_04519599.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|270488487|ref|ZP_06205561.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294502157|ref|YP_003566219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|21362543|sp|Q8ZJP0|FPG_YERPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81691945|sp|Q66GD3|FPG_YERPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122979351|sp|Q1C270|FPG_YERPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123372834|sp|Q1CD05|FPG_YERPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988465|sp|A7FCT7|FPG_YERP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238687318|sp|A9R677|FPG_YERPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238688491|sp|B1JQX0|FPG_YERPY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691335|sp|B2JYN6|FPG_YERPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21956751|gb|AAM83683.1|AE013609_8 formamidopyrimidine DNA glycosylase [Yersinia pestis KIM 10] gi|45434773|gb|AAS60334.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51587689|emb|CAH19289.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108777606|gb|ABG20125.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Yersinia pestis Nepal516] gi|108781394|gb|ABG15452.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|115345884|emb|CAL18742.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|149290292|gb|EDM40369.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|152960035|gb|ABS47496.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162351271|gb|ABX85219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165915720|gb|EDR34328.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|165921966|gb|EDR39143.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989574|gb|EDR41875.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205114|gb|EDR49594.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963220|gb|EDR59241.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048478|gb|EDR59886.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054361|gb|EDR64178.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752893|gb|ACA70411.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186696421|gb|ACC87050.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|229678606|gb|EEO74711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|229690293|gb|EEO82347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229696267|gb|EEO86314.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706613|gb|EEO92619.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|262360236|gb|ACY56957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D106004] gi|262364183|gb|ACY60740.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D182038] gi|270336991|gb|EFA47768.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294352616|gb|ADE62957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|320013406|gb|ADV96977.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PKGWIIIHLGMSGSLRVLSEETA----AEKHDHVDLVVSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|229512786|ref|ZP_04402254.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] gi|229350296|gb|EEO15248.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|167549026|ref|ZP_02342785.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325559|gb|EDZ13398.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|116495189|ref|YP_806923.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei ATCC 334] gi|116105339|gb|ABJ70481.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus casei ATCC 334] Length = 282 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + K H+HVT + + + ++ Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDANTPFDK---HDHVTFTFQDGS-----QLRYRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|15640251|ref|NP_229878.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586313|ref|ZP_01676102.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121729455|ref|ZP_01682084.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|147674090|ref|YP_001218481.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|153820030|ref|ZP_01972697.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|153821781|ref|ZP_01974448.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|227080441|ref|YP_002808992.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|229506978|ref|ZP_04396486.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229509348|ref|ZP_04398831.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229516295|ref|ZP_04405743.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229606486|ref|YP_002877134.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254851351|ref|ZP_05240701.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255744033|ref|ZP_05417987.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262161924|ref|ZP_06030941.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|262168066|ref|ZP_06035765.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|298500863|ref|ZP_07010665.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] gi|21362548|sp|Q9KVC5|FPG_VIBCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|172047483|sp|A5F407|FPG_VIBC3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789454|sp|C3LQI3|FPG_VIBCM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9654629|gb|AAF93397.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549433|gb|EAX59461.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121628630|gb|EAX61105.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|126509434|gb|EAZ72028.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|126520677|gb|EAZ77900.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|146315973|gb|ABQ20512.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|227008329|gb|ACP04541.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|227012068|gb|ACP08278.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|229346721|gb|EEO11691.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229353663|gb|EEO18600.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229356083|gb|EEO21002.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229369141|gb|ACQ59564.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254847056|gb|EET25470.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255738298|gb|EET93689.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262023599|gb|EEY42301.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|262028302|gb|EEY46958.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|297540367|gb|EFH76426.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPLCEQKIAQRNTFFCPQCQ 268 >gi|330505432|ref|YP_004382301.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] gi|328919718|gb|AEB60549.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] Length = 270 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDIRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI S+I HLGMSGS + A +H HV I L + + Y DPR Sbjct: 61 LI-KAEVGSLIGHLGMSGSLRLVECGLA----AAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGALLWSE--DPLRHELLSKLGPEPLGGLFDGERLFQMSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRARYL------RLAEEIKRILTHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRGGEFC-KVCGSTLREVKLGQRASVYCPKCQR 270 >gi|312901579|ref|ZP_07760852.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] gi|311291374|gb|EFQ69930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] Length = 280 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLASFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWHAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|256823439|ref|YP_003147402.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] gi|256796978|gb|ACV27634.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] Length = 269 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + +T + +++ LR+ + G D+ RRAKY+ Sbjct: 1 MPELPEVETTKNGLAPHIVGKRITAVNIYQPQLRWPVAEE-ATTLVGLVSSDIERRAKYM 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L S+++HLGMSG+ + A +H+H + + + + +NDPR Sbjct: 60 LWH-FSTGSLVMHLGMSGTMRVVSAQSAL----KKHDHFEVVFDD-----RTALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + PEP + F+ YL K+ +KNA+++ K+V G+ Sbjct: 110 RFGAILWQPKGETLKVLSQLG--PEPLSDDFDGQYLHQALTKRKGAIKNAVMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P R + L I+ VL AI GG++L+D+ Sbjct: 168 GNIYASESLFMSGIHPKRAANKVSLAR------CKLLAGFIKTVLEKAIGEGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYF +VYG+ PC + CG +I++ V RS+FYC CQ+ Sbjct: 222 QTDGSPGYFAQQLNVYGRADLPC-NQCGAIIKKQVIGQRSSFYCPKCQR 269 >gi|332159689|ref|YP_004296266.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603788|emb|CBY25286.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica Y11] gi|325663919|gb|ADZ40563.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859992|emb|CBX70320.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica W22703] Length = 269 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYVVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKT-GWIIVHLGMSGSLRI----LPEETEAEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTETE------ITQLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|221310849|ref|ZP_03592696.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|221315175|ref|ZP_03596980.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320092|ref|ZP_03601386.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324374|ref|ZP_03605668.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767671|ref|NP_390786.2| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|7531268|sp|O34403|FPG_BACSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|225185299|emb|CAB14868.2| formamidopyrimidine-DNA glycosidase [Bacillus subtilis subsp. subtilis str. 168] Length = 276 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYGLHQAEEPDDK----HVHVIFTMTDGT-----QLRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 273 >gi|262273493|ref|ZP_06051307.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] gi|262222471|gb|EEY73782.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] Length = 269 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + K+ VT + + + LR+ P G+ I V RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHAKDQVVTKLEVRQPKLRWPVPDTLFN-IEGQTIRAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++E +VHLGMSGS + + +H+HV + L+N + YNDPR Sbjct: 60 ILET-DIGYALVHLGMSGSLRV----LPEATPAGKHDHVDLHLSNGK-----VIRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L LGPEP + F YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWQEKGD--DHPVLEKLGPEPLTDDFTGDYLLEKAKGKRTAIKPFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +K+ P R L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSKIHPTRSAGQLTHEE------AQTLVAEIKAVLAMAIRQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+PC CG+++ + R+T +C CQK Sbjct: 222 QADGKPGYFAQELRVYGKQGKPC-PVCGEVLESVKIGQRNTVFCPACQK 269 >gi|27364270|ref|NP_759798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio vulnificus CMCP6] gi|29611711|sp|Q8DDY4|FPG_VIBVU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27360388|gb|AAO09325.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus CMCP6] Length = 269 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGS-AIVHLGMSGSLRVLDADFP----AGKHDHVDLKLSNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +GPEP N+F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYAAPGEDHDVLG--NIGPEPLTNAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEEW------QRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|90023321|ref|YP_529148.1| formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] gi|123395478|sp|Q21EE3|FPG_SACD2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89952921|gb|ABD82936.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] Length = 271 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ ++ V + + ++LR+ P + + K + + RR KYL Sbjct: 1 MPELPEVETTRRGILPHLEGKRVKAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E N +I HLGMSGS I H+HV I+ N + Y DPR Sbjct: 61 LLE-FANGHVIWHLGMSGSLRIIKADEP----PMVHDHVDIAFGGN-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ L LGPEP ++FN+ YL + K++ ++K +++ K+V G+ Sbjct: 111 RFGAVLW-TNEAILEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P++ L Q K VL AI+ GG++LRD+V Sbjct: 170 GNIYANEALFNSAIHPLKAAGKLSQKQCDIFCSEIK------SVLAKAIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ G+ C C + + R+T YCT+CQK Sbjct: 224 GGDGKPGYFAQELNVYGRGGKAC-KKCRKPLTEKKLGQRTTVYCTHCQK 271 >gi|16767011|ref|NP_462626.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994347|ref|ZP_02575439.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241905|ref|ZP_02666837.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260520|ref|ZP_02682493.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194451470|ref|YP_002047758.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|6016042|sp|O54326|FPG_SALTY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690227|sp|B4T9C0|FPG_SALHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2842793|gb|AAC01773.1| MutMST [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422294|gb|AAL22585.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194409774|gb|ACF69993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205327810|gb|EDZ14574.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338984|gb|EDZ25748.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350455|gb|EDZ37086.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248874|emb|CBG26728.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995987|gb|ACY90872.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160263|emb|CBW19786.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914752|dbj|BAJ38726.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226779|gb|EFX51829.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132086|gb|ADX19516.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990575|gb|AEF09558.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 269 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|308047858|ref|YP_003911424.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] gi|307630048|gb|ADN74350.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] Length = 270 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V ++ + LR+ G+ I+ V+RRAKYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRVVEEVIVRNPRLRWPVDP-LIQQLVGQTILSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ E +I+HLGMSGS + + +H+H+ + L + + NDPR Sbjct: 60 LVDTEA-GVLILHLGMSGSLRVLDP----VPEPGKHDHLDLVLDSGA-----VLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + P L LGPEP +FNA L K S +K AL++ +V G+ Sbjct: 110 RFGAAIWWQLP-LDAQPLLNKLGPEPLTAAFNAEQLAAALKGKTSAIKTALMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L + L KL++E++ VL AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPKRAAGNLSKAR------LAKLVEEVKAVLARAIQQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ G+ C+ CG ++ I R+T YC +CQ+ Sbjct: 223 QADGKPGYFVQQLNVYGRGGQACV-QCGAQLKEIKLGQRATVYCGHCQR 270 >gi|113866406|ref|YP_724895.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] gi|123134465|sp|Q0KEP4|FPG_RALEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113525182|emb|CAJ91527.1| Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] Length = 292 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 149/302 (49%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPQLEMRLAQRVVRRIERRGKYL 60 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR- 113 L+E E ++VHLGM+G+ + + H+H+ + L Sbjct: 61 LLECVSEAAGEPAGWLLVHLGMTGTLRV----LPEAPSPGAHDHLDLVLAPGPGAALGTK 116 Query: 114 -----VIYNDPRRFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + DPRRFG + + +P LRTLG EP D +F+ +L +++ Sbjct: 117 PGTIVLRFRDPRRFGAILWSTLPEAELPSHPLLRTLGIEPFDPAFDGAWLHRHTRGRSAA 176 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL IV G+GNIY E+L+RA + P L + +L Q +++ L Sbjct: 177 IKTVLLAGGIVVGVGNIYASESLFRAGIRPTTPAGRLSRAR------CDRLAQAVRETLA 230 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI+ GGS+LRD+V DG+ GYFQ VY + G+PC C +R+IVQ RSTFYC Sbjct: 231 QAIERGGSTLRDFVGSDGASGYFQLDCLVYDRAGQPC-RVCATPVRQIVQGQRSTFYCPN 289 Query: 287 CQ 288 CQ Sbjct: 290 CQ 291 >gi|324993806|gb|EGC25725.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK405] gi|324994875|gb|EGC26788.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK678] Length = 274 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y +R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAVRKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|475032|dbj|BAA05066.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans] Length = 273 Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ H H+ L + ++Y D R Sbjct: 61 LLNLNRQ-TIISHLRMEGKYLLFEDEVPDNK----HFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|241896103|ref|ZP_04783399.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] gi|241870617|gb|EER74368.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] Length = 278 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + + F F A R + I+ + RR KY Sbjct: 1 MPELPEVETVRRGLTNLVAGRTVESTEVRWEKTVGGFTAEEFDQALRNQTILKIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M GS+ K +H+ VT L + + + Y D Sbjct: 61 LLFRFTGGITMVSHLRMEGSYYTVPAGT----KPGKHDLVTFHLDHGVD-----LFYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++V L T+GPEP +++ Y+ +F K ++K LLNQ +AG Sbjct: 112 RKFGRMNIVPNDQVMTVAGLATIGPEPTEDTLTLDYMISEFGKSKMHVKPFLLNQNHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P+ L + L L + I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHPLTAANQLTTDE------LAILRKNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G+ G FQN VYG+ GEPCL CG+ + +I A R T YC CQ Sbjct: 226 TNVFGNAGEFQNELQVYGRVGEPCL-RCGEPLVKIKVAQRGTTYCPVCQ 273 >gi|16762583|ref|NP_458200.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144072|ref|NP_807414.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415616|ref|YP_152691.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168235331|ref|ZP_02660389.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168818444|ref|ZP_02830444.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194734471|ref|YP_002116661.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263131|ref|ZP_03163205.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364543|ref|YP_002144180.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204928552|ref|ZP_03219751.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354672|ref|YP_002228473.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858963|ref|YP_002245614.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161284|ref|ZP_03346994.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425232|ref|ZP_03357982.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213615651|ref|ZP_03371477.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289824124|ref|ZP_06543721.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362542|sp|Q8Z2H2|FPG_SALTI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81677677|sp|Q5PC09|FPG_SALPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689781|sp|B4TZX7|FPG_SALSV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690465|sp|B5R5F9|FPG_SALEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690539|sp|B5RGF2|FPG_SALG2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690753|sp|B5BI09|FPG_SALPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|25289586|pir||AG0971 formamidopyrimidine-DNA glycosylase STY4068 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504888|emb|CAD03267.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139709|gb|AAO71274.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129873|gb|AAV79379.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194709973|gb|ACF89194.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096020|emb|CAR61607.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197241386|gb|EDY24006.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291486|gb|EDY30838.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321985|gb|EDZ07183.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274453|emb|CAR39485.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205344433|gb|EDZ31197.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710766|emb|CAR35127.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088146|emb|CBY97908.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326625471|gb|EGE31816.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 269 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|161616806|ref|YP_001590771.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189044674|sp|A9MVN0|FPG_SALPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161366170|gb|ABX69938.1| hypothetical protein SPAB_04625 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 269 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QGDGKPGYFAQELQVYGRKGEPC-RVCGTPIAATKHAQRATFYCRHCQK 269 >gi|254363106|ref|ZP_04979160.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] gi|153094993|gb|EDN75556.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] Length = 274 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQ-MAGAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + I+VHLGMSGS I K + +H+HV + N T + YNDPR Sbjct: 60 IIRTDK-GDILVHLGMSGSLGILQERQQK--EIGKHDHVDLITQNGTI-----LRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G+ Sbjct: 112 KFGCWLWAEKAEDHE--LLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTKKQ------CERLVKTIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG+ I V R+T++C CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGETC-NDCGKPIETKVIGQRNTYFCPKCQR 271 >gi|229087142|ref|ZP_04219292.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] gi|228696210|gb|EEL49045.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] Length = 276 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKIIKDVIVTYPKLVKRPDDAELFKEMLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ A +H HV T+ T + Y D Sbjct: 61 FLLLYV-TKYVIVSHLRMEGKYLLHEGDEA----IDKHTHVRFQFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + +++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFEEMPLADLGPEPFDAELTPAYLQDKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVETLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPICQ 273 >gi|307286687|ref|ZP_07566773.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|306502165|gb|EFM71449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|315165260|gb|EFU09277.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302] Length = 280 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQVDD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|162147553|ref|YP_001602014.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209545659|ref|YP_002277888.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|189044595|sp|A9HI30|FPG_GLUDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161786130|emb|CAP55712.1| putative formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209533336|gb|ACI53273.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 286 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 116/293 (39%), Positives = 169/293 (57%), Gaps = 19/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + + T+ + + R +LRF FP A G I +RRAKY+ Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIARVAVRRADLRFPFPADLVARLEGATITGFARRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++++HLGMSG ++ A +H T+ + +I DPR Sbjct: 61 LIRLDTGDTLLLHLGMSGRVLLSLPGDAPVPDRHEH-----FFFETTDGTRCGLI--DPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ T+ + + L LGPEP N F+ +L ++ +++K ALL+Q +VAG+ Sbjct: 114 RFGAVDLMPTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALLDQTVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R +L +L+Q I+ VL +AI AGGSSLRDYV Sbjct: 174 GNIYVSEALFRAGIHPARLACTLDAAED------ARLVQAIRAVLREAIAAGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQ 288 DG +GYFQ+A+ VYG+ G+ C +C + R+ QAGRS+F+C CQ Sbjct: 228 QPDGELGYFQHAWRVYGRAGQGC-PDCPGPPACHGVERLEQAGRSSFFCPLCQ 279 >gi|15615714|ref|NP_244018.1| formamidopyrimidine-DNA glycosylase [Bacillus halodurans C-125] gi|17375861|sp|Q9K855|FPG_BACHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|10175774|dbj|BAB06871.1| formamidopyrimidine-DNA glycosidase [Bacillus halodurans C-125] Length = 274 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R D F +G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAELVIGKTIEQVDVGWAKMIKRPDDVDQFKWLLKGQTIRSMGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + +++ HL M G + + + + +H HV + T + Y D Sbjct: 61 FLLFHL-DDYTLVSHLRMEGRYGLYQQNES----VAKHTHVRFVFGDGT-----ELRYQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ + PPL LG EP + F+A LT + K + +K+ALL+Q I+ Sbjct: 111 VRKFGTMHLFQSGREQMEPPLAKLGVEPFSDQFSAKLLTERLSKTSRKIKSALLDQGIIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P R + + + L Q I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRARIHPERLAKDVTVAE------VKILHQAILNTLTEAVNLGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ GE C CG I + V GR T +C+ CQK Sbjct: 225 YVNGQGEMGMFQQRLDVYGRKGETC-RQCGTPITKTVVGGRGTHFCSVCQK 274 >gi|257875614|ref|ZP_05655267.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] gi|257809780|gb|EEV38600.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] Length = 280 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 142/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + +I HL M G + + H HV T+ + ++ Y+D Sbjct: 61 LIF-KLTDYDLISHLRMEGKYEYFESDPIVDK----HTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P + SL L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPEQPADSLTPAEANV------LHQAIIDVLERAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|257865987|ref|ZP_05645640.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257872320|ref|ZP_05651973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] gi|257799921|gb|EEV28973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257806484|gb|EEV35306.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] Length = 280 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 142/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + +I HL M G + + H HV T+ + ++ Y+D Sbjct: 61 LIF-KLTDYDLISHLRMEGKYEYFESDPIVDK----HTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAEIHPEQPADSLTPAEANV------LHQAIIDVLERAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae NTUH-K2044] gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] Length = 269 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTRT--LEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|253690458|ref|YP_003019648.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259647146|sp|C6DIB8|FPG_PECCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|251757036|gb|ACT15112.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 269 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNTRLRWPVSGEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-TRGWIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--TDNPETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNENDAAV------LVSVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQK 269 >gi|306834024|ref|ZP_07467145.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] gi|304423812|gb|EFM26957.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] Length = 296 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVAFETGILGQTFQNIGRRGKYL 83 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 84 LLMLNKQ-VIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDVR 133 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 134 KFGTMELLYLNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 193 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 194 GNIYVDEALWAAKIHPERVSSSLTDSE------IALLHDEIIQILQLGIVKGGTTIRTYH 247 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 248 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|301047424|ref|ZP_07194504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] gi|300300698|gb|EFJ57083.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] Length = 269 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVEPSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|295693392|ref|YP_003602002.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] gi|295031498|emb|CBL50977.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] Length = 275 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHEKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K H+HV T++T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTSDAPKDK----HDHVEFIFTDHT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P+ P +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHPLSAANK------IPAKKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|300705247|ref|YP_003746850.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] gi|299072911|emb|CBJ44267.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] Length = 288 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 145/300 (48%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + A H+H+ I L + + Sbjct: 61 LIECVPDAAREPRAVAGWLLVHLGMTGTLRVLEVPVA----PGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGR------IGRPRYAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|311069404|ref|YP_003974327.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] gi|310869921|gb|ADP33396.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] Length = 275 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 155/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVRGKTIKSVEIRWPNIIKRPAEPEEFARNLIGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + + HL M G + + H HV ++T+ T ++ Y D Sbjct: 61 FLLFHLDHFVMV-SHLRMEGKYGLHQAEDPDDK----HVHVVFTMTDGT-----QLRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D F YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFHPGEEMRELPLSQLGPEPDDKEFTDAYLKERLMKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + KL +EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANQLSAK------KIKKLHEEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK +PC + CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHFVYGKKDKPCKT-CGTMISKIVVGGRGTHFCAKCQK 274 >gi|254448389|ref|ZP_05061850.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] gi|198262002|gb|EDY86286.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] Length = 270 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 145/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + R LR+ P F G +I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIEGQLVDSVVVRRDQLRYPVPKDFEQ-LMGARIHCVERRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + HLGMSGS + +H+H+ I+L N + + Y+DPR Sbjct: 60 IV-NTDYKHWLCHLGMSGSLRLVDGDTP----YKKHDHLDIALANGRH-----LRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP + F+ +L + + +KN +++ ++V G+ Sbjct: 110 RFGLVVW-AGTTPQAHPLLCKLGPEPLGHHFSGEHLYAKSRGRKGAVKNFIMDSQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R + L Q IQ VL DAI GG++LRD+V Sbjct: 169 GNIYASECLFLAGIHPKRAAGRVGLAR------YQALAQAIQTVLGDAITQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ EPC CG I V RS+++C CQ+ Sbjct: 223 NSDGQPGYFAQQLRVYGRAQEPC-PQCGSPIHTQVIGQRSSYFCKQCQR 270 >gi|323703152|ref|ZP_08114806.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] gi|323531929|gb|EGB21814.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] Length = 277 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKI-IDVSRRAK 58 MPELPEVE + R+L + +T+T + + +R P F+ GK++ + RR K Sbjct: 1 MPELPEVETVVRSLEKHLAGLTITAVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L L+++VHL M+G + +H HV L N ++ + D Sbjct: 61 YLLLHLSDGLTLVVHLRMTGRLVYCDAETP----VEKHTHVIFHLDNGK-----QLRFTD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV TS + ++ LGPEP D SF +L + ++ + +K LL+Q +A Sbjct: 112 QRQFGRMQLVPTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLLLDQCFIA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA++ P R L + +L + I +V+ I G++ RD Sbjct: 172 GLGNIYADEALFRARVHPERIASDLSPRE------IARLHKAIVEVIAGGIKHRGTTFRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q VY + PC +CG+ I RI AGRS++YC CQK Sbjct: 226 YVDGEGRAGSYQQHLKVYNRENLPC-PHCGKPIARIKVAGRSSYYCPCCQK 275 >gi|307609359|emb|CBW98845.1| hypothetical protein LPW_06351 [Legionella pneumophila 130b] Length = 274 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSG I ++ +H+HV + + N + + DPR Sbjct: 61 LLH-MDKGYLLIHLGMSGHLRIV----SQTANPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|54307427|ref|YP_128447.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] gi|81697553|sp|Q6LVN0|FPG_PHOPR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46911847|emb|CAG18645.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] Length = 269 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M TVT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEI-QQIEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS I S +H+HV + L++ + YNDPR Sbjct: 60 LLHTDV-GYAIVHLGMSGSLRILPASIP----PEKHDHVDLVLSSGE-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP N F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--GLPDLDHKVLSQLGPEPLSNDFTAEYLQERAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + + + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEISPE------KIALFVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|312984113|ref|ZP_07791460.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] gi|310894467|gb|EFQ43542.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] Length = 275 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKDK----HDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P+ P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHPLSAANK------IPAEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|168464966|ref|ZP_02698858.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632352|gb|EDX50836.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 269 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPTEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|227877045|ref|ZP_03995134.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256850115|ref|ZP_05555545.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|262047414|ref|ZP_06020371.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] gi|227863363|gb|EEJ70793.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256713087|gb|EEU28078.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|260572388|gb|EEX28951.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] Length = 275 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKDK----HDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P+ P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHPLSAANK------IPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|323351177|ref|ZP_08086833.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] gi|322122401|gb|EFX94112.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] Length = 274 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFHLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFQMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|52840799|ref|YP_094598.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680527|sp|Q5ZY18|FPG_LEGPH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52627910|gb|AAU26651.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 274 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSG I ++ +H+HV + + N + + DPR Sbjct: 61 LLH-MDKGYLLIHLGMSGHLRIV----SQTANPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|270292906|ref|ZP_06199117.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] gi|270278885|gb|EFA24731.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] Length = 274 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKRISSLEIRYPKMIKTDLEEFQKELPGQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLEAYFISKKLGPEPKDQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R ++SL + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQSLTAEEAS------AIHDQTIAVLRQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTLIEKIQLGGRGTHFCPQCQR 272 >gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 269 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-TRGWIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--TDNPETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRTAGSLNEND------AAILVSVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG +I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTLIETAKHGQRSTFFCRRCQK 269 >gi|323497067|ref|ZP_08102090.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] gi|323317911|gb|EGA70899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] Length = 269 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 145/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ + +++RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGEKIAKLTFRTPKLRWDIPVELKK-LEGQVVRNITRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + A +H+HV + L N + YNDPR Sbjct: 60 LIETDAGS-AIVHLGMSGSLRVLDAEIA----PGKHDHVDLKLANGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L GPEP + FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWSEDG---HHSVLENAGPEPLTDEFNAEYIAAKAINKKVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + L + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSAGIHPTKAAGQLTERQW------QLLVVEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC C I + R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKKGEPC-PQCAGPIEELKIGQRNTFFCNQCQK 268 >gi|262404958|ref|ZP_06081510.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] gi|262348797|gb|EEY97938.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] Length = 269 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL +I GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQT------LVANIKQVLQVSIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|327184033|gb|AEA32480.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus amylovorus GRL 1118] Length = 276 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPEAPKDK----HDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTERQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHPLSLANK------IPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|301169670|emb|CBW29271.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus influenzae 10810] Length = 271 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I + A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQNSA----IDKHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|256843649|ref|ZP_05549137.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|293381756|ref|ZP_06627733.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] gi|256615069|gb|EEU20270.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|290921676|gb|EFD98701.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] Length = 275 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIEKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKDK----HDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P+ P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHPLSAANK------IPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|134096049|ref|YP_001101124.1| formamidopyrimidine-DNA glycosylase [Herminiimonas arsenicoxydans] gi|166215628|sp|A4G916|FPG_HERAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133739952|emb|CAL63003.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) [Herminiimonas arsenicoxydans] Length = 273 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V+ + L LR+ FP S G+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPYLEGQVVSGVVLRHTGLRWPFPAALSQTLAGRTIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++IVHLGMSG I +H+H +++ N + DPR Sbjct: 61 LIH-FDHGTLIVHLGMSGHIRILPLGVP----PQKHDHFDMTVGNQ------VLRLTDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E Q+ LRTLG EP + F A +L Q + S +K LL IV Sbjct: 110 RFGAVLWHAAEEGAVDQHLLLRTLGVEPLEGLFTAQWLYRQTRSRRSAIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A ++P + +L Q I+++L AI GGS+L+D Sbjct: 170 GVGNIYASESLFQAGINPKTQAHR------IGLQRYERLAQAIREILAAAIAQGGSTLKD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + VY +TGEPC C +R+IVQ RSTFYC CQK Sbjct: 224 FIGVNGQSGYFQQNYFVYARTGEPC-RICNAPVRQIVQGQRSTFYCPNCQK 273 >gi|325570070|ref|ZP_08145995.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] gi|325156898|gb|EGC69069.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] Length = 280 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + +I HL M G + + H HV T+ + ++ Y+D Sbjct: 61 LIF-KLTDYDLISHLRMEGKYKYFESDPIVDK----HTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P + SL+ L + I VL +++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPEQPADSLMPTEVDV------LHEAIIDVLERSVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I +I A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKIKVAQRGTHFCPQCQK 273 >gi|197249599|ref|YP_002148658.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238910239|ref|ZP_04654076.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|238689996|sp|B5EXE0|FPG_SALA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197213302|gb|ACH50699.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 269 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|288942769|ref|YP_003445009.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] gi|288898141|gb|ADC63977.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] Length = 277 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR P G+ I + RR+KYL Sbjct: 1 MPELPEVETTLRGIRPHLEGRRIARLIVRNPRLRQPIPPEMPERVAGQPIRSLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + S++VHLGMSGS + + H+H+ + L++ + ++DPR Sbjct: 61 LI-GLEHGSLLVHLGMSGSLRVVTAESP--LPPRTHDHLDLVLSDGGI-----LRFHDPR 112 Query: 121 RFGFMDLVETSLKY---QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + S + ++P L LGPEP +N F+ +L + +K+ +++ +V Sbjct: 113 RFGIFLWIPMSPEIALVEHPLLCRLGPEPLENDFDGEHLYRSSRSRRVAVKSFIMDSAVV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A L P R + Q +L + I++VL +I+ GG++LR Sbjct: 173 VGVGNIYASESLFLAGLHPARACNRIDQGG------YGRLAETIRRVLRASIEQGGTTLR 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V+ G+ GYF + VYG+ GEPC CG I RS+FYC CQ Sbjct: 227 DFVNETGAPGYFAQSLRVYGRAGEPC-RICGTRIEPQRIGQRSSFYCPRCQ 276 >gi|259906762|ref|YP_002647118.1| formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|224962384|emb|CAX53839.1| Formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|283476548|emb|CAY72376.1| formamidopyrimidine DNA glycosylase [Erwinia pyrifoliae DSM 12163] gi|310765972|gb|ADP10922.1| formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 269 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNARLRWPVSQEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PTGWIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP +SF+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CADLNGSSVLSHLGPEPLSDSFSARYLFEKSRGKRTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEQEAG------LLVSTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+TGEPC C + A RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRTGEPC-RVCAMPVESSKHAQRSTFFCRRCQK 269 >gi|329903035|ref|ZP_08273347.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gi|327548513|gb|EGF33179.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 316 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 140/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV D+ L R LR+ FP + G+ + RR KYL Sbjct: 44 MPELPEVEVTRMGIAPHLDGRTVADVVLRRSGLRWPFPPDLAVTLAGRTVRSTGRRGKYL 103 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++++HLGMSG I S + + R+ Sbjct: 104 LI-GFDHGTLLIHLGMSGHLRILPLSTPSEKHD--------HFDLVVGDQLMRLTDPRRF 154 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E + LR LG EP + A L HQ +++ +K LL +V G+ Sbjct: 155 GAVLWHAQEDGPLEHHVLLRGLGIEPLGATLLAQTLFHQTRGRSAAIKQVLLAGDVVVGV 214 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA+++P + +L EIQ L AI GGS+LRD+V Sbjct: 215 GNIYASESLFRARINPKTPAGRIALAR------YERLASEIQDTLSAAIAQGGSTLRDFV 268 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ ++ VY +TGEPC CG +R+I Q RSTFYC +CQK Sbjct: 269 GANGQSGYFQQSYFVYDRTGEPC-RVCGLAVRQIKQGQRSTFYCVHCQK 316 >gi|315038862|ref|YP_004032430.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] gi|312276995|gb|ADQ59635.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] Length = 276 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKYHLTTPEAPKDK----HDHVEFIFTDGT-----VLRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNTPEFSEQYFVSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHPLSSANK------IPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|306831910|ref|ZP_07465065.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425836|gb|EFM28953.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 296 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVAFETEILGQTFQNIGRRGKYL 83 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 84 LLMLNKQ-VIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDVR 133 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 134 KFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 193 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 194 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGISKGGTTIRTYH 247 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 248 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|145632333|ref|ZP_01788068.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145634123|ref|ZP_01789834.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] gi|144987240|gb|EDJ93770.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145268567|gb|EDK08560.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] Length = 271 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I + +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIV----PQYSAIDKHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|88801019|ref|ZP_01116568.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] gi|88776222|gb|EAR07448.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] Length = 282 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 102/284 (35%), Positives = 158/284 (55%), Gaps = 18/284 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N T++ + + LR+ P TR ++++ VSRR+KY+ Sbjct: 1 MPELPEVETTCRGIEPHLNNRTISRVTVRDARLRWPIPPELDDWTRDQRVLGVSRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L ++IVHLGMSGS + +H+HV + L N R+ YNDPR Sbjct: 61 LIQL-ERGTLIVHLGMSGSLRVLLDDP----TPGKHDHVDVELDNG-----VRLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + Q+ + LGPEP + F+ YL K+ + +K+ +++ +IV G+ Sbjct: 111 RFGAWLYTE-APLEQHELIAHLGPEPLTDDFSVDYLWAMSRKRKTKIKSFIMDARIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P + + + +L+ I++VL AI+ GG++LRD+V Sbjct: 170 GNIYANEALFLSGIYPHKLAGKITRAE------CERLVANIKQVLALAINQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 DG GYF + +VYG++GE C CG +IR + RST +C Sbjct: 224 GGDGKPGYFAQSLNVYGRSGELC-RQCGTVIRELRTNNRSTCFC 266 >gi|312114960|ref|YP_004012556.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] gi|311220089|gb|ADP71457.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 127/297 (42%), Positives = 171/297 (57%), Gaps = 15/297 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR L M+ + + L+R +LRF F F RG++I ++RRAKY+ Sbjct: 1 MPELPEVEIIRRGLAPAMEGAAFSAVTLNRADLRFPFEPRFVERLRGQRIARLTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---------KPIKNPQHNHVTISLTNNTNTKK 111 + E + L + +HLGM+G F IEH + + N H+HV +++N Sbjct: 61 VAEADSGLCLAMHLGMTGRFTIEHKADGAVTPGSFYYEHAANALHDHVVFAMSNGE---- 116 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + YNDPRRFG+M L +P R LG EP ++ YL + K LK L Sbjct: 117 -VIRYNDPRRFGYMTLFGAGEMAAHPLFRALGIEPLSDALTPDYLAARAAGKAQALKAFL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+I+AG+GNIYVCEAL+RA L P + +L K +L I+ VL DA+ A Sbjct: 176 LDQRIIAGLGNIYVCEALFRAGLPPDAEAGALGVGRR-GKAAAARLCAAIKAVLEDALLA 234 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGSS+RDY H +G G+FQ F VYG+ GEPC + CG I R Q GRSTF+C +CQ Sbjct: 235 GGSSIRDYRHANGDGGHFQEKFDVYGRGGEPCHNKCGSFIERKAQQGRSTFFCPHCQ 291 >gi|312874220|ref|ZP_07734254.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] gi|311090290|gb|EFQ48700.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] Length = 276 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|294085129|ref|YP_003551889.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664704|gb|ADE39805.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 167/289 (57%), Gaps = 12/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V+ V + + RK+LR+ P G + +RR KY+ Sbjct: 1 MPELPEVETVRSALAPVVTGQQVMAVYVGRKDLRWPLPEALDKQLLGCRFAAPTRRGKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +++HLGMSGS I + +H+H+ +++ + +Y ++ NDPR Sbjct: 61 LMPNDNGQVLLIHLGMSGSIRIHEAKP----ELAKHDHMMLTVEADDGGHRY-IVLNDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DL + L+ +GPEP N+F+A ++ F + S +KNALL+Q+++AGI Sbjct: 116 RFGWVDLFAAEDMATHKLLKDMGPEPLGNAFSATHIQTVFANRKSPVKNALLDQRLIAGI 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL+++ +SP R+ S+ KL I VL AI GG+SLRD+V Sbjct: 176 GNIYACEALFKSGISPRRRAGSITAGRAD------KLAHAIVTVLRAAIAEGGTSLRDHV 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G IGYF SVYG+ G PC+ C IR IVQ+GRS+FYC CQ+ Sbjct: 230 QPGGEIGYFVQKLSVYGRDGLPCV-ICETPIRIIVQSGRSSFYCPSCQR 277 >gi|148360789|ref|YP_001251996.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|296106144|ref|YP_003617844.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] gi|148282562|gb|ABQ56650.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|295648045|gb|ADG23892.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] Length = 274 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSG I ++ +H+H+ + + N + + DPR Sbjct: 61 LLH-MDKGYLLIHLGMSGHLRIV----SQTANPQKHDHIDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFN------ALTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|269103920|ref|ZP_06156617.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163818|gb|EEZ42314.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 269 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S IVHLGMSGS + A +H+HV + L++ + YNDPR Sbjct: 60 LLDT-PVGSAIVHLGMSGSLRVLPAGTA----PEKHDHVDLVLSSGEI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP ++F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDAFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEVTP------QALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCPQCQQ 269 >gi|224585526|ref|YP_002639325.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254789450|sp|C0Q1W8|FPG_SALPC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|224470054|gb|ACN47884.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 269 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFP 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|309803096|ref|ZP_07697193.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|309810236|ref|ZP_07704081.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] gi|308164604|gb|EFO66854.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|308169508|gb|EFO71556.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] Length = 276 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|294055081|ref|YP_003548739.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] gi|293614414|gb|ADE54569.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] Length = 269 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + + + + LR+ P A G +I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGISPHVEGRLIVALHVRQPKLRWLVPELIQQA-VGHRILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ SI++HLGMSGS I+ A +H+HV + L + + NDPR Sbjct: 60 ILDT-EVGSIVLHLGMSGSLTIQPAGKA----PTKHDHVDLVLEDGNC-----LRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L+ LGPEP + F+ L K++ +KN +++ +V G+ Sbjct: 110 RFGACLWQASGETLE--LLQGLGPEPLTDDFDGERLYQLSRKRSGAVKNFVMSNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P + L + +L + I++VL AI+ GG++LRD++ Sbjct: 168 GNIYANEALFMSGIDPRKPAGKLSRAR------CDRLAESIKQVLARAIEKGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ SVYGK GEPC CG +I+ R++FYC+ CQ+ Sbjct: 222 GADGKPGYFRIELSVYGKAGEPC-PKCGNLIQSRTIGQRNSFYCSNCQR 269 >gi|325978855|ref|YP_004288571.1| formamidopyrimidine-DNA glycolase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178783|emb|CBZ48827.1| fpg [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 273 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVSFETEILGQTFQNIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 61 LLMLNKQ-VIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDIR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 111 KFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 171 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRTYH 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 225 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|56552083|ref|YP_162922.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] gi|59802555|sp|Q9X3X1|FPG_ZYMMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56543657|gb|AAV89811.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 270 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 160/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + R +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTIRGLSEVLMGEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I + K H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKINPENFEK------HDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R +GPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNIGPEPLTGNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L + + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNLNFDE------ITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQCE--CGHTIERYTLGGRSTFLCSSCQK 270 >gi|260912781|ref|ZP_05919267.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] gi|260633159|gb|EEX51324.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] Length = 270 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ +K+ +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGFIIEKIVVRQPKLRWMVSEEL-KQITQQKVTGLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E I HLGMSGS I + +H+H+ I + N + YNDPR Sbjct: 60 IIHTEQCYII-GHLGMSGSLRIV----SPQDTVDKHDHLDIVMNNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLW--TDNLEEFHLFLKLGPEPLSEEFNADYLWKKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + + L++++++VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPEKAAGSLTKAQCSQ------LVEQVKQVLTTAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG + ++ R++FYC CQK Sbjct: 222 QPDGRPGYFSQKLLVYGNKDKPC-PKCGTKVESLMIGQRNSFYCPKCQK 269 >gi|315223054|ref|ZP_07864933.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] gi|315188004|gb|EFU21740.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] Length = 274 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADPFVLELPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +I HL M G ++ + ++ +H+HV T+ ++ ++Y D R Sbjct: 61 IFYLTNW-VLISHLRMEGKYLF----YPEEVQLTKHSHVIFHFTDGSS-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP ++ F+ + K +K LL+Q +VAG+ Sbjct: 111 KFGTMELLRKEQITSYFTERKLGPEPTESDFHLLPFETALKKSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +SL +L ++I VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARAAQSLTAGE------AEELRKQIIAVLQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|288959514|ref|YP_003449855.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] gi|288911822|dbj|BAI73311.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] Length = 280 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 121/295 (41%), Positives = 163/295 (55%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R NLR FP F G+++ + RRAKY+ Sbjct: 1 MPELPEVETVCRGLAPHLEGRRLVHVEQRRPNLRTPFPPRFCERLTGRRVEALRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ +IVHLGMSG II A K H+HV T V +ND R Sbjct: 61 LMDLDDGGVLIVHLGMSGRMIIAPERPAAFDK---HDHVVFETDAGTI-----VTFNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL +P LR LGPEP N+F+ L + K + +K ALL+Q IVAG+ Sbjct: 113 RFGLMDLTVADALADHPMLRNLGPEPLGNAFSGPELARRLAGKMTPIKAALLDQSIVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+++ + P R SL + +L ++ VL AI AGGSSLRDY Sbjct: 173 GNIYVSEALFQSGILPTRGAASLTGEE------VDRLAAAVRAVLERAIAAGGSSLRDYR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG------QMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ+ F+VY + GE C +C ++RIVQ+GRSTF+C Q+ Sbjct: 227 QASGELGYFQHQFAVYDREGEGC-PDCDCDRARTGGVQRIVQSGRSTFFCAARQR 280 >gi|217962065|ref|YP_002340635.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] gi|217063081|gb|ACJ77331.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] Length = 276 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ +IV GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKIVVGGRGTHYCPICQ 273 >gi|85709426|ref|ZP_01040491.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] gi|85688136|gb|EAQ28140.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] Length = 271 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L+R +LR FP G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLDGERIERVTLNRPDLRRPFPPELVQVMTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++I HLGMSG + I+ + H+H+ + +R DPR Sbjct: 61 LIHLDRGATMIFHLGMSGRWRIDPEEADR------HDHLLME------AAGHRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL +T +P +GPEP F + L K+ ++K LL+Q+IVAG+ Sbjct: 109 RFGSVDLEQTDALDTWPQFAAMGPEPLGPDFTSEKLKSALKGKSQSIKLCLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWR+ + P++ + + L +L+ I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWRSGIHPLKAGGKVTRPQ------LARLVPAIRDVLTASIKDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G IRRI Q GRST+YC CQ+ Sbjct: 223 APDGELGYFATRFDVYGRTGELCRREDGGKIRRIAQGGRSTWYCAKCQR 271 >gi|62182219|ref|YP_218636.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505480|sp|Q57IA7|FPG_SALCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|62129852|gb|AAX67555.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716707|gb|EFZ08278.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 269 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSGEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|288905821|ref|YP_003431043.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] gi|288732547|emb|CBI14119.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] Length = 273 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVSFETEILGQTFQNIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 61 LLMLNKQ-VIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDIR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 111 KFGTMELLYPNQIEAYFQKKNLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 171 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRTYH 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 225 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|148826404|ref|YP_001291157.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|166215625|sp|A5UDC3|FPG_HAEIE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148716564|gb|ABQ98774.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|309973552|gb|ADO96753.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2846] Length = 271 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I + A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQNSA----IDKHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTLNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|259500514|ref|ZP_05743416.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|302191204|ref|ZP_07267458.1| formamidopyrimidine-DNA glycosylase [Lactobacillus iners AB-1] gi|309808040|ref|ZP_07701959.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|312875632|ref|ZP_07735633.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325912596|ref|ZP_08174979.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] gi|259167898|gb|EEW52393.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|308168723|gb|EFO70822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|311088886|gb|EFQ47329.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325478017|gb|EGC81146.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] Length = 276 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|145638232|ref|ZP_01793842.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272561|gb|EDK12468.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751387|gb|ADO81371.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2866] Length = 271 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|331266547|ref|YP_004326177.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] gi|326683219|emb|CBZ00837.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] Length = 274 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDLDEFQREVPGQVIESVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L N +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TNKVLISHLRMEGKYFYYPDQVPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPKEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAAEAS------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQAC-SRCGTLIEKFQLGGRGTHFCPQCQR 272 >gi|198241869|ref|YP_002217687.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690332|sp|B5FM59|FPG_SALDC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197936385|gb|ACH73718.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 269 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDKIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|309805278|ref|ZP_07699330.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|312871811|ref|ZP_07731899.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|329920100|ref|ZP_08276931.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] gi|308165512|gb|EFO67743.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|311092753|gb|EFQ51109.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|328936554|gb|EGG32998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] Length = 276 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|293393616|ref|ZP_06637926.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] gi|291423951|gb|EFE97170.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] Length = 269 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIEL-DHGWIIVHLGMSGSLRM----LAEESEAGKHDHVDLVMSNG-----MILRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP +F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CDDLAASNVLAHLGPEPLSEAFDGQYLFDKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R+ SL + L + I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRQAGSLTRAEAD------LLAETIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RVCGTPIESAKHGQRSTFFCRRCQ 268 >gi|322612892|gb|EFY09844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618957|gb|EFY15844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625266|gb|EFY22093.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630067|gb|EFY26840.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634258|gb|EFY30993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635841|gb|EFY32550.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643021|gb|EFY39598.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645051|gb|EFY41582.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649849|gb|EFY46272.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653056|gb|EFY49391.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661125|gb|EFY57353.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662386|gb|EFY58599.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667264|gb|EFY63430.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674359|gb|EFY70452.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678433|gb|EFY74494.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680939|gb|EFY76973.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687125|gb|EFY83098.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195849|gb|EFZ81021.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198234|gb|EFZ83340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200852|gb|EFZ85922.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206606|gb|EFZ91564.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210481|gb|EFZ95367.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216231|gb|EGA00959.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220454|gb|EGA04908.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225317|gb|EGA09551.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228431|gb|EGA12562.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234252|gb|EGA18340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237237|gb|EGA21304.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244756|gb|EGA28760.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245869|gb|EGA29859.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250948|gb|EGA34824.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257304|gb|EGA41003.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262228|gb|EGA45789.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264561|gb|EGA48065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268851|gb|EGA52309.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 269 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK +K L++ K+V G+ Sbjct: 110 RFG--TWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKMAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|295425308|ref|ZP_06818011.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] gi|295065084|gb|EFG55989.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] Length = 276 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKI+D+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIKKVTLWYPKIVATDHQQFIDELPGKKILDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKDK----HDHVQFEFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP F Y + +K+ N+KN LL+Q IVAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSKEFTEAYFIAKLKRKHKNIKNTLLDQSIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P+D + +L +I + AI G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSIASK------IPEDKVKELHTKINHEISIAIKMRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ VYG GE C NCG +I GR T +C +CQ Sbjct: 226 DANGNAGGFQKMLQVYGHVGEAC-PNCGNKFEKIKVNGRGTTFCPHCQ 272 >gi|262163760|ref|ZP_06031500.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] gi|262027740|gb|EEY46405.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] Length = 269 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWPIPQEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL + L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLGLDEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|238798815|ref|ZP_04642284.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] gi|238717323|gb|EEQ09170.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] Length = 269 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PTGWIIVHLGMSGSLRVLPEETA----AEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSSVLAHLGPEPLSDEFSPQYLFDKSRHKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPERAAGSLTQAE------ISLLVTTIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CGQ I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGQRIEIAKHGQRSTFFCRHCQ 268 >gi|309800253|ref|ZP_07694429.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] gi|308116106|gb|EFO53606.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] Length = 274 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+++ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKIASLDIRYPKMIKTDLDQFQKELHGQELQSMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G ++ + H HV I + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYLYYPDQVPERK----HAHVLIHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPELLEAYFLSKKLGPEPTEQDFDLEIFRGALKKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL KL + +VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAKVHPARTSNSLSAQE------ARKLHDQTIEVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQAC-SRCGSIIEKIQLGGRGTHFCPKCQR 272 >gi|256617749|ref|ZP_05474595.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] gi|256597276|gb|EEU16452.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] Length = 280 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQVAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|227115115|ref|ZP_03828771.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 269 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIEL-TRGWIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--TDNLETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +++ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRTAGSLNESD------AAILVGVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIEIAKHGQRSTFFCRRCQK 269 >gi|325912043|ref|ZP_08174441.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] gi|325475993|gb|EGC79161.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] Length = 276 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQK----HEHVQFAFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|121534306|ref|ZP_01666130.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] gi|121307076|gb|EAX47994.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] Length = 274 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE IRR L + + + + L ++ F A G+KI + RR KY Sbjct: 1 MPEMPEVETIRRTLADKVVGRRIEAVKIDLPRLVKWPSVSEFKEAVTGRKIERLDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL LE +L ++VHL M+G ++ + H+ L NN +IY D Sbjct: 61 LLFRLEHDLVMVVHLRMTGRLYYVPAGY----QHDKFTHIVFDLDNND-----ALIYADS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + + + + L T+GPEP F Y K+ S++K LLNQ+++ G Sbjct: 112 RTLGTLYAIHLADLGRIAGLATMGPEPLSPEFTFDYFRMMLKKRQSSIKAVLLNQQLIGG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E+L A ++P R SL ++ KL + I +V+ + I GG+S RDY Sbjct: 172 LGNIYVDESLAVAGIAPTRPAASLSEDET------QKLYRAINQVIEEGIAHGGTSFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G Q+ VYG+ G+PC CG I R AGR T +C CQ+ Sbjct: 226 RDGVGQTGSHQHYLRVYGRKGQPCQ-RCGMPIVRTEVAGRGTHFCPICQR 274 >gi|148828123|ref|YP_001292876.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittGG] gi|166215626|sp|A5UI87|FPG_HAEIG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148719365|gb|ABR00493.1| hypothetical protein CGSHiGG_08295 [Haemophilus influenzae PittGG] Length = 271 Score = 205 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N Y L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CYSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|312872916|ref|ZP_07732976.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] gi|311091438|gb|EFQ49822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] Length = 276 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+D+ R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKKAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|254877419|ref|ZP_05250129.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843440|gb|EET21854.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 289 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKE------AERLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 289 >gi|241668887|ref|ZP_04756465.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 61 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AERLVTSIKKILDKAIAEGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 274 >gi|312868208|ref|ZP_07728408.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] gi|311095953|gb|EFQ54197.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] Length = 274 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILEKTIQSVEVKYAKMIQTDLDAFCQDLPGQEIRAMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + H HV T+ + ++Y D R Sbjct: 61 LFYL-TDLVLISHLRMEGKYFFYPDEVPLRK----HAHVFFHFTDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPELVDSYFLAKKIGPEPTEADFKDPAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + +E VL A+ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTARE------AKAIRKETIAVLAQAVKKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|228923330|ref|ZP_04086618.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836284|gb|EEM81637.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKETLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|16272883|ref|NP_439106.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae Rd KW20] gi|260580035|ref|ZP_05847865.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] gi|1169727|sp|P44948|FPG_HAEIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1573970|gb|AAC22606.1| formamidopyrimidine-DNA glycosylase (fpg) [Haemophilus influenzae Rd KW20] gi|260093319|gb|EEW77252.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] Length = 271 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYTNESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|15603010|ref|NP_246082.1| formamidopyrimidine-DNA glycosylase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431514|sp|P57910|FPG_PASMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12721492|gb|AAK03229.1| Fpg [Pasteurella multocida subsp. multocida str. Pm70] Length = 270 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ + +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQ-ITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQL-ETGYMIGHLGMSGSLRVVEKGD----LIDKHDHLDIVVNNGK-----VVRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTE--KLDEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + +L+++I++VL +AI GG++L+D++ Sbjct: 168 GNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 222 QPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|262172686|ref|ZP_06040364.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] gi|261893762|gb|EEY39748.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] Length = 269 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIET-AVGSAIVHLGMSGSLRILDGDFP----AAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLW--CAPDESHEVLGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL + L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLSLDEWQT------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKLGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|229846005|ref|ZP_04466117.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] gi|229811009|gb|EEP46726.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] Length = 271 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAKYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|326629811|gb|EGE36154.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 287 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 19 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 77 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 78 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 128 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 185 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 186 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 239 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 240 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 287 >gi|38492995|pdb|1R2Y|A Chain A, Mutm (Fpg) Bound To 8-Oxoguanine (Oxog) Containing Dna gi|38492998|pdb|1R2Z|A Chain A, Mutm (Fpg) Bound To 5,6-Dihydrouracil (Dhu) Containing Dna Length = 274 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MP+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|329122967|ref|ZP_08251538.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] gi|327471898|gb|EGF17338.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] Length = 274 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 4 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 63 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 113 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 171 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 225 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 272 >gi|293390965|ref|ZP_06635299.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951499|gb|EFE01618.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] Length = 285 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAE-LHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I H+H I + N + YNDPR Sbjct: 74 VIHT-EQGYIIGHLGMSGTVRIVSHGSPIDK----HDHFDIVMNNGK-----LLRYNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + +KK + LK L++ +V GI Sbjct: 124 RFGAWLWTEKLDEFHLFL--KLGPEPLSEEFNAEYLFKKLYKKTTALKTVLMDNTVVVGI 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 182 GNIYANESLFLCGLHPLKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 236 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|145628119|ref|ZP_01783920.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|145630040|ref|ZP_01785822.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145640614|ref|ZP_01796197.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|319775119|ref|YP_004137607.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] gi|144979894|gb|EDJ89553.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144984321|gb|EDJ91744.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145274540|gb|EDK14403.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] gi|317449710|emb|CBY85917.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] Length = 271 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|319897563|ref|YP_004135760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] gi|317433069|emb|CBY81443.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] Length = 271 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGVHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|290580027|ref|YP_003484419.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] gi|254996926|dbj|BAH87527.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] Length = 272 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIAGKKIVSVEVRVPKMVKTGVEDFQLGILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ H H+ L + ++Y D R Sbjct: 61 LLNLNRQ-TIISHLRMEGKYLLFEDEVPDNK----HFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|54296585|ref|YP_122954.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila str. Paris] gi|81679547|sp|Q5X7I9|FPG_LEGPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53750370|emb|CAH11764.1| hypothetical protein lpp0616 [Legionella pneumophila str. Paris] Length = 274 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ I++HLGMSG I ++ +H+HV + + N + + DPR Sbjct: 61 LLH-MDKGYILIHLGMSGHLRIV----SQTANPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|123440466|ref|YP_001004460.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166198757|sp|A1JHR7|FPG_YERE8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122087427|emb|CAL10208.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 269 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKT-GWIIVHLGMSGSLRI----LPEETEAEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSNVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTETE------ITQLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|30264656|ref|NP_847033.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Ames] gi|47530126|ref|YP_021475.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187476|ref|YP_030728.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49481341|ref|YP_038631.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140924|ref|YP_085906.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|65321953|ref|ZP_00394912.1| COG0266: Formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A2012] gi|118479733|ref|YP_896884.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis str. Al Hakam] gi|165869590|ref|ZP_02214248.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167634061|ref|ZP_02392384.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|167638114|ref|ZP_02396392.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|170685575|ref|ZP_02876798.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|170705602|ref|ZP_02896066.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|177651233|ref|ZP_02934064.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190569044|ref|ZP_03021944.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|196032694|ref|ZP_03100107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196047497|ref|ZP_03114708.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218905813|ref|YP_002453647.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225866563|ref|YP_002751941.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB102] gi|227817370|ref|YP_002817379.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CDC 684] gi|228917224|ref|ZP_04080781.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929633|ref|ZP_04092651.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935893|ref|ZP_04098703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948310|ref|ZP_04110593.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124152|ref|ZP_04253344.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|229186841|ref|ZP_04313996.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|229601163|ref|YP_002868865.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|254687393|ref|ZP_05151249.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CNEVA-9066] gi|254724956|ref|ZP_05186739.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A1055] gi|254736693|ref|ZP_05194399.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Western North America USA6153] gi|254741730|ref|ZP_05199417.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Kruger B] gi|254754672|ref|ZP_05206707.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Vollum] gi|254757504|ref|ZP_05209531.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Australia 94] gi|301056091|ref|YP_003794302.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis CI] gi|39931254|sp|Q81L04|FPG_BACAN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81685955|sp|Q633L1|FPG_BACCZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81696636|sp|Q6HCU5|FPG_BACHK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30259331|gb|AAP28519.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. Ames] gi|47505274|gb|AAT33950.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181403|gb|AAT56779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49332897|gb|AAT63543.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974393|gb|AAU15943.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|118418958|gb|ABK87377.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Bacillus thuringiensis str. Al Hakam] gi|164714419|gb|EDR19938.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167513931|gb|EDR89299.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|167530862|gb|EDR93564.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|170129727|gb|EDS98590.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|170670039|gb|EDT20779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|172083059|gb|EDT68121.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190559826|gb|EDV13811.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|195994123|gb|EDX58078.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196021712|gb|EDX60408.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218534883|gb|ACK87281.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225786312|gb|ACO26529.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus 03BB102] gi|227007061|gb|ACP16804.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. CDC 684] gi|228596578|gb|EEK54243.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|228659454|gb|EEL15102.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|228811297|gb|EEM57635.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823661|gb|EEM69483.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830020|gb|EEM75639.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842425|gb|EEM87516.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265571|gb|ACQ47208.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|300378260|gb|ADK07164.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|266618586|pdb|3GP1|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-V222p Complex Length = 273 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 143/290 (49%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS+ R Y Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTPRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|229158188|ref|ZP_04286255.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] gi|228625146|gb|EEK81906.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] Length = 276 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|168232573|ref|ZP_02657631.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472197|ref|ZP_03078181.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458561|gb|EDX47400.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333284|gb|EDZ20048.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 269 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLVHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPIVATKHAQRATFYCRHCQK 269 >gi|307703776|ref|ZP_07640717.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] gi|307622611|gb|EFO01607.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] Length = 274 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEITYPKMIKTDLDEFQKEVSGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV I + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFIRFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|293365237|ref|ZP_06611954.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] gi|291316687|gb|EFE57123.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] Length = 288 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKKISSVEITYPKMIKTDLDEFQKEVSGQVIESMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV I + ++Y D R Sbjct: 75 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFIRFEDG-----GTLVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 125 KFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 239 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 286 >gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens LL3] Length = 278 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 114/290 (39%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + N+ P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 64 LLFHL-DHYVMVSHLRMEGKYGLHQADEPDDK----HVHVVFNMTDGT-----QLRYRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K SL + KL EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGIHPETKANSLSDGQ------IKKLHTEIKDTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 228 INSQGEIGMFQLRHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 276 >gi|295706847|ref|YP_003599922.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] gi|294804506|gb|ADF41572.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] Length = 277 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + + +++ HL M G + + + + +H HV T+ T + Y D Sbjct: 61 FLKI-VLDDYTMVSHLRMEGKYALHENA----EEPDKHVHVFFHFTDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYKEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|294501499|ref|YP_003565199.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] gi|294351436|gb|ADE71765.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] Length = 277 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + + +++ HL M G + + + + +H HV T+ T + Y D Sbjct: 61 FLKI-VLDDYTMVSHLRMEGKYALHENA----EEPDKHVHVFFHFTDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYEEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM 2228] Length = 276 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 153/293 (52%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPELPEVE + + L +++N VT++ + KN+ +P + F G KI V RR Sbjct: 1 MPELPEVETVVKGLGPLIRNKKVTEVEIREKNMI-AYPKNNIKAFKKDLLGAKIEKVKRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY++IEL ++++HL M+G +++ + H HV SL + + + Sbjct: 60 GKYIIIELNNYKNLVIHLRMTGKLLVKEVKDFRDK----HTHVIFSLDDGQ-----EIRF 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 N+ R+FG + L++ Q L TLGPEP ++ + F + + +K+ LLNQK Sbjct: 111 NNIRKFGRVYLIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLLLNQKF 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+RA + P R L ++ + ++++L I GG+S Sbjct: 171 IAGIGNIYADEILFRAAILPDRTADQLSESEK------EAIYYNMREILQKGIIYGGTSF 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYV+ G G FQ V+ + + C CG I++I +GRST++C CQK Sbjct: 225 SDYVNAFGEKGSFQEELRVHQREEKKCY-QCGTKIKKIKISGRSTYFCPQCQK 276 >gi|312882923|ref|ZP_07742655.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369442|gb|EFP96962.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V + + LR+D P +G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKVVKVTVRTPKLRWDIPTELKE-MQGQVIQSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + IVHLGMSGS + A +H+HV + L N + YNDPR Sbjct: 60 LIQT-KVGTAIVHLGMSGSLRVLDAELA----PQKHDHVDVKLANGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L+T+GPEP + F+A Y++ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSEDGC---HTVLKTMGPEPLTDDFDADYISAKAVSKRVTVKQFIMDNKIVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L N KL++EI+KVL AI GG++L+D+ Sbjct: 167 GNIYANESLFTAGILPTRGAGTLSLNEW------QKLVKEIKKVLSTAIAQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+ C C ++ R+TF+C YCQ+ Sbjct: 221 QADGKPGYFAQELQVYGKGGQAC-PCCAHPVKEQKIGQRNTFFCEYCQR 268 >gi|289167814|ref|YP_003446083.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] gi|288907381|emb|CBJ22218.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] Length = 274 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDLDEFRKEVPGQIVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQAFQTALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVYPARPSQTLTAEEMT------AIRDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGKEC-SRCGTLIEKIQLGGRGTHFCPNCQR 272 >gi|90414930|ref|ZP_01222894.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] gi|90323986|gb|EAS40582.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] Length = 269 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + VT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVVGQIVTKIIVRNPKLRWPIPEEI-QQIEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS + S +H+HV + L++ + YNDPR Sbjct: 60 LLHTDV-GYAIVHLGMSGSLRVLPVSIP----PEKHDHVDLVLSSGE-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--ELPDLDHKVLSQLGPEPLSDDFTAKYLQDRAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + + + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEISAE------KIALFVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|145638327|ref|ZP_01793937.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272656|gb|EDK12563.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751473|gb|ADO81457.1| Formamidopyrimidine-DNA-glycosylase 2 [Haemophilus influenzae R2866] Length = 270 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ + +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQ-ITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQL-ETGYMIGHLGMSGSLRVVEKGD----LIDKHDHLDIVVNNGK-----VVRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTE--KLNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + +L+++I++VL +AI GG++L+D++ Sbjct: 168 GNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 222 QPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|319651808|ref|ZP_08005933.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317396460|gb|EFV77173.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 147/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + F A G+ D+ RR K Sbjct: 1 MPELPEVETVRRTLQELVIGKTIAHVSVFWPKMVKHPEELVQFKDALAGQIFQDIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L++ +++ HL M G + + H HV T+ T + Y D Sbjct: 61 FLILYTID-YALVSHLRMEGRYGLFLKEEPVDK----HTHVIFHFTDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +++ PL LGPEP F A L + + N+K ALL+QK + Sbjct: 111 VRKFGTMHLYAKGEEFKTLPLAHLGPEPFGEEFTAEDLAARLARTTRNIKTALLDQKTIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+++ P R SL ++ L L +EI L +A+D GGS++R Sbjct: 171 GLGNIYVDEALFRSRIHPERAANSLTKSE------LETLHKEIADTLREAVDKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ GE C CG + RIV GR T YC CQK Sbjct: 225 YVNSQGQIGMFQLELYVYGRKGEDC-KVCGSTLERIVTGGRGTVYCPACQK 274 >gi|228954855|ref|ZP_04116875.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804844|gb|EEM51443.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 276 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDPEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|304407961|ref|ZP_07389611.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] gi|304342980|gb|EFM08824.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] Length = 299 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R P F+AA G I V RR K Sbjct: 1 MPELPEVETVRRTLNELVAGKTIVRVTVSLPRIIRRPAEPEQFAAALAGHTITSVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + L ++ HL M G + + H HV T+ T + Y D Sbjct: 61 FLRL-VLDGLVLVSHLRMEGRYGVYRQDELVET----HTHVIFHFTDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL PPL LG EP D+ F L + + + +K LL+Q V Sbjct: 111 VRQFGTMDLFAPEEDLLLPPLNKLGMEPLDDDFTEKALRERLSSRTTKIKPLLLDQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL++A + P R +L + T +L + I+ L A+ AGGSS++ Sbjct: 171 GLGNIYVDEALFQAGIHPERTADTLKRAEWT------RLYEAIRDTLGRAVAAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+A YG+ GEPC S CG +I + V GR T C CQ Sbjct: 225 YVNGQGEMGMFQHALLAYGRGGEPCTS-CGTVIEKFVVGGRGTHVCPRCQ 273 >gi|266618589|pdb|3GPP|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-T224p Complex gi|266618607|pdb|3GQ5|A Chain A, Sequence-Matched Mutm Interrogation Complex 5 (Ic5) Length = 273 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Y Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRPY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|229175294|ref|ZP_04302809.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] gi|228608126|gb|EEK65433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] Length = 276 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|315653651|ref|ZP_07906571.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] gi|315489013|gb|EFU78655.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] Length = 276 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKISAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQK----HEHVQFAFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q+ L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQD------SLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|187927361|ref|YP_001897848.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|309779938|ref|ZP_07674692.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] gi|229541081|sp|B2UES0|FPG_RALPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187724251|gb|ACD25416.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|308921297|gb|EFP66940.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] Length = 291 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 136/299 (45%), Gaps = 18/299 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLLPHITGRRIVRAVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIELEGNLSIIVH-LGMSGSFIIEHTS-------CAKPIKNPQHNHVTISLTNNTNTKKY 112 LIE + G +++ H P+ H+HV I L Sbjct: 61 LIECVPEVEQSGRAADTVGGWLLIHLGMTGTLRVLETPVPPGLHDHVDIEL-AGATGVHV 119 Query: 113 RVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + Y DPRRFG + ++P LR LG EP D F+ ++ + + +K+A Sbjct: 120 TLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVAIKSA 179 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL IV G+GNIY E+L+RA + P + + L I+ L DAI Sbjct: 180 LLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALADAIRATLADAIA 233 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTF C CQ+ Sbjct: 234 RGGSTLRDFVGSDGQSGYFQLEAFVYDRAGLPC-RACGTPIRQIVQGQRSTFCCPTCQR 291 >gi|254491571|ref|ZP_05104750.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxidans DMS010] gi|224463049|gb|EEF79319.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxydans DMS010] Length = 272 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ P A + +++ V RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYVEGNTISKMVVRHRGLRWPVPEQLEAIVKDQRVTKVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++I+HLGMSG + +H+HV I + N + + + DPR Sbjct: 61 LFR-CDKGTLILHLGMSGRLRVLDNDHN----IGKHDHVDIYINNG-----HVLRFTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E + + + LGPEP + FNA YL + ++ N+K+ ++N +IV G+ Sbjct: 111 RFGAVLWTE-ADTDTHQLIAHLGPEPLADLFNADYLYQKAKGRSGNIKSFIMNGEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + KL+ A+ AGG++LRD+ Sbjct: 170 GNIYANEALFLAGIHPAKAAGKISKAKMAELVEAIKLVLNR------ALLAGGTTLRDFR 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ EPCL C I I QA R+T++C CQ+ Sbjct: 224 KSDGKPGYFAQELNVYGRENEPCL-RCQAPINCIRQAQRATYFCKQCQR 271 >gi|312868766|ref|ZP_07728958.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] gi|311095752|gb|EFQ54004.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] Length = 277 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 140/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K + I ++ + F A G+ I D+ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKGRKINAIDVYYGKTITNDVEDFRQALIGQTIEDIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL+++ HL M G + + +H HV T+ T + Y+D R Sbjct: 61 LFRFSNNLTMVSHLRMEGKYY----NQPIGGPIDKHTHVVFQFTDGT-----ELCYHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + L+TLGPEP F + + + +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVETGDEKTVGGLKTLGPEPTAADFKLAFFQDELGRSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +K++P + SL + L I K L A G+++ + Sbjct: 172 GNIYVDEVLWMSKINPEQPANSLTPDQAAV------LHDNIIKELAVATKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGGFQERLNAYGRGGEKC-PRCGAKMVKIKVAQRGTTFCPHCQ 272 >gi|30022661|ref|NP_834292.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218232074|ref|YP_002369382.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus B4264] gi|229048293|ref|ZP_04193861.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|229072088|ref|ZP_04205297.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|229081838|ref|ZP_04214330.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|229112051|ref|ZP_04241594.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|229129870|ref|ZP_04258836.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|229147146|ref|ZP_04275504.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|229152781|ref|ZP_04280964.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|296505058|ref|YP_003666758.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] gi|39931253|sp|Q817G5|FPG_BACCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29898219|gb|AAP11493.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218160031|gb|ACK60023.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus B4264] gi|228630601|gb|EEK87247.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|228636256|gb|EEK92728.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|228653561|gb|EEL09433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|228671374|gb|EEL26675.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|228701426|gb|EEL53920.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|228711022|gb|EEL62988.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|228723018|gb|EEL74395.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|296326110|gb|ADH09038.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] Length = 276 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|312797351|ref|YP_004030273.1| Formamidopyrimidine-DNA glycosylase [Burkholderia rhizoxinica HKI 454] gi|312169126|emb|CBW76129.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Burkholderia rhizoxinica HKI 454] Length = 285 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + + I V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPYVAGRRVQRVEVRNFALRWPVPATLARELEQRVIHKVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL + +IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 70 LFEL-DDGWLIVHLGMTGTLRVLR-NLPALPPAARHDHIDWVFDE------FVMRFRDPR 121 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++P L +LG EP ++F+ L + + ++K AL+ IV Sbjct: 122 RFGAVLWHPRASGDVLEHPLLASLGVEPFSSAFSGALLHRRTRGRTVSIKQALMAGDIVV 181 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L I+ L AID GGS+LRD Sbjct: 182 GVGNIYASESLFRAGIRPSTPAGRVSLPR------YELLADAIRATLAAAIDKGGSTLRD 235 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V G GYFQ + VY + G PC CG IR IVQ RST+YCT CQ+ Sbjct: 236 FVGSHGESGYFQLDYFVYDRAGRPC-HACGVPIRHIVQGQRSTYYCTRCQR 285 >gi|256850825|ref|ZP_05556214.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260661036|ref|ZP_05861950.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|282934506|ref|ZP_06339761.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297205698|ref|ZP_06923093.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] gi|256615887|gb|EEU21075.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260547973|gb|EEX23949.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|281301453|gb|EFA93742.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297148824|gb|EFH29122.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] Length = 275 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVEI+R+ L ++ + ++ + N+ FS + K+II + R AK+L Sbjct: 1 MPEMPEVEIVRKTLNEIVLGKIIKEVKVWYPNIIIGDSESFSDQLKEKQIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L NL+I+ HL M G + + AK H+HV T+ T+ + YND R Sbjct: 61 LFRLSDNLTIVSHLRMEGKYRLASPQDAKDK----HDHVEFIFTDGTS-----LRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + + ++ LGPE + F Y K N+K LL+Q +V+G+ Sbjct: 112 KFGRMQLIRTGTEKEKTGIKKLGPEALSDDFTLSYFKQALKNKKKNIKATLLDQDVVSGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +++ P R SL N + KL I +V+ AI G+++ ++ Sbjct: 172 GNIYVDETLWLSEIYPERPANSLADNE------IKKLYLAINQVISQAIKERGTTVHTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG+ GE C CG ++++ AGR T +C CQ Sbjct: 226 DAEGQTGGYQKYLKVYGRAGEKCF-RCGNVLQKTKVAGRGTTFCPKCQ 272 >gi|42783763|ref|NP_981010.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] gi|81699643|sp|Q72ZF1|FPG_BACC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42739693|gb|AAS43618.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAKIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|167626455|ref|YP_001676955.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596456|gb|ABZ86454.1| DNA-formamidopyrimidine glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 289 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGVVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FN YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNKMPLEHRVLATHGVEPLTDDFNTEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKE------AERLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQ+ Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNCY-VCSTKIESLVIAQRNTFFCKKCQR 289 >gi|52081409|ref|YP_080200.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|52786785|ref|YP_092614.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|319647317|ref|ZP_08001539.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] gi|81690937|sp|Q65G93|FPG_BACLD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52004620|gb|AAU24562.1| formamidopyrimidine-DNA glycosidase [Bacillus licheniformis ATCC 14580] gi|52349287|gb|AAU41921.1| MutM [Bacillus licheniformis ATCC 14580] gi|317390664|gb|EFV71469.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] Length = 275 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + + R + P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAGLVRGKTIDAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + + HL M G + + H HV T+ + + Y D Sbjct: 61 FLLFHLDDCVMV-SHLRMEGKYGLHQNDEPLDK----HVHVIFRFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PLR LGPEP + F A YL + K N ++K ALL+Q+ V Sbjct: 111 VRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLDQRTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P L + L +EI + L +A++AGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPEATANKLTKKQTV------LLHKEIIQTLKEAVEAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYG+ EPC CG I + V GR T +C CQK Sbjct: 225 YINSQGEIGMFQLKLFVYGRKDEPC-KKCGSPIEKTVVGGRGTHFCIKCQK 274 >gi|260752387|ref|YP_003225280.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551750|gb|ACV74696.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 270 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 159/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTVRGLSEVLMGEKIIDVKVRGASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I + K H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKINPENFEK------HDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R LGPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNLGPEPLTRNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L + + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNLNFDE------ITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQCE--CGHTIERYTLGGRSTFLCSSCQK 270 >gi|163847434|ref|YP_001635478.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] gi|189044586|sp|A9WDC2|FPG_CHLAA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163668723|gb|ABY35089.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] Length = 278 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L ++ T+T L + P F+A G++I + RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTPSPDEFAALIAGRRIEAIGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G ++ +HL MSG ++ ++ +H H + L N R+I+ND Sbjct: 61 LLLSLDGEWTLAIHLRMSGQLLVAEPETSE----ARHVHFALDLDNGR-----RLIFNDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++ + PEP F L + + + +K LL+Q ++AG Sbjct: 112 RKFGRVHLLDRQGLAALDAVHG--PEPLAADFTPSALAERLQNRRAPIKALLLDQHLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A++ P+ L + +L I+ VL +AI GSSLR+Y Sbjct: 170 IGNIYANEALWLARIHPLTPGAMLTPEQ------INELHHAIRHVLQEAITNQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q F+VY + GEPC C I RIV A RST++C CQ Sbjct: 224 RDGYGRQGTQQEHFNVYDRAGEPC-PRCQSTIERIVVAQRSTYFCPTCQ 271 >gi|325577757|ref|ZP_08148032.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] gi|325160502|gb|EGC72628.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] Length = 271 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + KI+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTT-LKNVKILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPHDSP----IDKHDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + KK++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--SLDDFHLFLKLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPMKLAENLTRKQ------CALLVKTIKDVLAKAITQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++FYC +CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGTKIESMIIGQRNSFYCPHCQK 269 >gi|196040881|ref|ZP_03108179.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|229093682|ref|ZP_04224781.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] gi|196028335|gb|EDX66944.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|228689567|gb|EEL43375.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIKNIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|47564996|ref|ZP_00236039.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] gi|47557782|gb|EAL16107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATITTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|228941765|ref|ZP_04104312.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974689|ref|ZP_04135255.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981283|ref|ZP_04141583.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228778483|gb|EEM26750.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228785092|gb|EEM33105.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817977|gb|EEM64055.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942369|gb|AEA18265.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTIEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|261823580|ref|YP_003261686.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] gi|261607593|gb|ACX90079.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] Length = 269 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTIFYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL G IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELTG-GWIIVHLGMSGSLRV----LPEYTEPEKHDHVDLVMDSGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T L LGPEP + F++ YL K + +K +++ K+V G+ Sbjct: 110 RFGAWLW--TDNLETCSVLAHLGPEPLEAEFSSDYLYQASRNKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +++ T L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNESDATV------LVRVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRSGEPC-RTCGTPIETAKHGQRSTFFCRCCQK 269 >gi|194017136|ref|ZP_03055748.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] gi|194011004|gb|EDW20574.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] Length = 277 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRLVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + +H HV + T+ T + Y+D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYRVHEA----HEPYDKHVHVVFTFTDGT-----ELRYHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEERELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L L ++I L A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLSLE------SCKVLHKQIIDTLQVAVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC + CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPCQT-CGSIIEKTVVGGRGTHFCVTCQK 274 >gi|161505738|ref|YP_001572850.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189044673|sp|A9MKN9|FPG_SALAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160867085|gb|ABX23708.1| hypothetical protein SARI_03914 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 269 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEAQPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + K+ + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKRKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSKEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPVVATKHAQRATFYCRHCQK 269 >gi|68249533|ref|YP_248645.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] gi|81336040|sp|Q4QLW2|FPG_HAEI8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68057732|gb|AAX87985.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] Length = 271 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRKPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|206977170|ref|ZP_03238069.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|222098047|ref|YP_002532104.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228987833|ref|ZP_04147942.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141311|ref|ZP_04269849.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|229198734|ref|ZP_04325432.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|206744655|gb|EDZ56063.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|221242105|gb|ACM14815.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228584756|gb|EEK42876.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|228642092|gb|EEK98385.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|228771881|gb|EEM20338.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|206969738|ref|ZP_03230692.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|229180905|ref|ZP_04308240.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] gi|229192787|ref|ZP_04319745.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|206735426|gb|EDZ52594.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|228590626|gb|EEK48487.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|228602462|gb|EEK59948.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] Length = 276 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTTQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLSEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|327463080|gb|EGF09401.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1] gi|327474681|gb|EGF20086.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK408] gi|327490239|gb|EGF22027.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1058] Length = 274 Score = 204 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDAVPERK----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D F + +K LL Q +V G+ Sbjct: 111 KFGTMELLNKDQLEFYFAARKLGPEPTDADFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA+L P R + SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARLHPARPSASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC CG I +I +GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGHPCA-RCGSPIEKIKLSGRGTHLCPRCQK 272 >gi|332638559|ref|ZP_08417422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Weissella cibaria KACC 11862] Length = 277 Score = 204 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + + P F A G++I + RR KY Sbjct: 1 MPELPEVETVRRGLTRLVVGRTVQGTAVWWEKTVDGLSPEEFDAELAGRRIEAIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M G++ + +H+ VT L + + ++Y D Sbjct: 61 LLFRFSGGMTMVSHLRMEGAYYTVPAGT----EPGKHDLVTFHLDDGID-----LLYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + Q L +GPEP +++ + Y+ +F K ++K LL+Q +AG Sbjct: 112 RKFGRMKLVPDAEALQVAGLAKIGPEPTESTLSLAYMVAEFGKSRMHVKPFLLDQSHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P+ L ++ L L I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHPLTPANKLSEDE------LAVLRDNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VYG+ GEPCL CG + ++ A R T +C CQ Sbjct: 226 TTAFGEAGEFQNELQVYGRVGEPCL-RCGHPLEKMKVAQRGTTFCPVCQ 273 >gi|75762013|ref|ZP_00741927.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899739|ref|YP_002448150.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228903103|ref|ZP_04067239.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] gi|228910410|ref|ZP_04074225.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|74490499|gb|EAO53801.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542389|gb|ACK94783.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228849176|gb|EEM94015.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|228856512|gb|EEN01036.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] Length = 276 Score = 204 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437] Length = 274 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ TV ++ + + P F +G+K+ V RR K Sbjct: 1 MPELPEVETVKRTLQKLITGKTVEEVKVSLPRILQEPPDPQLFGEMLKGRKVTGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + ++ HL M G + +E +H HV T+ T + Y D Sbjct: 61 FLRIFFDPW-VLVSHLRMEGRYSLESAETP----VAKHTHVIFRFTDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PPLR LGPEP +F K+ +N+K LLNQ+ + Sbjct: 111 VRQFGTMHLWPKGEELNLPPLRKLGPEPLSEAFTLAGFAAGLAKRKTNIKALLLNQEFLC 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R+ +SL + + +L + I+ L+ A++AGGSS+R Sbjct: 171 GLGNIYVDEALFTAGIHPERRVQSLDSDE------VKRLYKSIRSTLVKAVEAGGSSVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G +G FQ VYG+ GEPCL CG I R V AGR T +C CQ+ Sbjct: 225 YVDGNGEMGMFQLQIQVYGRKGEPCLH-CGHPIERRVVAGRGTHFCPECQQ 274 >gi|218708249|ref|YP_002415870.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] gi|254789455|sp|B7VHK6|FPG_VIBSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218321268|emb|CAV17218.1| Formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] Length = 269 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQEL-KRLEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDT-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLTNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGAWLWSAPDEIHTV--LLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + + L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKVTKQEWL------LLTKEIKQVLATAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCAELIQELKIGQRNTFYCSSCQ 268 >gi|39931196|sp|Q7MPS3|FPG_VIBVY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 269 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGS-AIVHLGMSGSLRVLDADFP----AGKHDHVDLKLSNGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYAAPGEDHDVLG--NIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEEW------QRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 268 >gi|37678473|ref|NP_933082.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] gi|37197213|dbj|BAC93053.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] Length = 294 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 26 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 85 IIETDVGS-AIVHLGMSGSLRVLDADFP----AGKHDHVDLKLSNGK-----VLRYNDPR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 135 RFGAWLYAAPGEDHDVLG--NIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 193 GNIYASESLFRSRILPTRATMSLSAEEW------QRLVSHIKQTLQTAIEQGGTTLKDFS 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 247 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 293 >gi|257094300|ref|YP_003167941.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046824|gb|ACV36012.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 275 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 149/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L+ +++ + + LR + P ++ G ++ + RR KYL Sbjct: 1 MPELPEVEVSRQGLLPLLRGQRILGAVVRTPRLRHEIPPDLASRLTGLRLDGILRRGKYL 60 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L++ E II+HLGMSGS + +H+HV + + + Sbjct: 61 LLDCESSARGGWIILHLGMSGSLRLVPPETP----PRKHDHVDLVF------GQSVLRLR 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + +P L LG EP F+ +L ++ +K L++ + Sbjct: 111 DPRRFGAVLWHAGGDVESHPLLAALGVEPLSEGFSGDWLYAATRRRRVAIKPLLMDSHFL 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+RA +SP+R + +L+ I+ L AI AGGSS+R Sbjct: 171 VGVGNIYAAESLFRAGISPLRTADRISLAR------YRRLVTAIRATLEAAIAAGGSSVR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYVH DG G FQ + +VY + G+PC C +R I Q+GRSTFYC CQ+ Sbjct: 225 DYVHSDGGAGCFQLSCAVYDRAGQPC-PACAGEVRTIRQSGRSTFYCPRCQR 275 >gi|197286978|ref|YP_002152850.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|238690077|sp|B4F0X6|FPG_PROMH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194684465|emb|CAR46215.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|301072215|gb|ADK56069.1| Fpg [Proteus mirabilis] gi|301072237|gb|ADK56090.1| Fpg [Proteus mirabilis] gi|312598039|gb|ADQ89973.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] gi|312598060|gb|ADQ89993.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] Length = 274 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 141/288 (48%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + H+H+ + + + Y DPR Sbjct: 60 LIEL-NQGWIIVHLGMSGSVRILPEEQPEEK----HDHIDLVFRDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP FNA YL Q K +K L++ K+V G+ Sbjct: 110 RFGAWLWCE--DLATSSVLAHLGPEPLSAQFNAQYLYQQSKNKKIAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P RK SL + L+ I+ VL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFSSGIMPDRKASSLTEQECDV------LVNAIKTVLTRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 268 >gi|259503618|ref|ZP_05746520.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] gi|259168442|gb|EEW52937.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] Length = 277 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K+ + I ++ + F A G+ I DV RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKDRKINAIDVYYGKTITNDVEKFRQALIGQTIEDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL+++ HL M G + + +H HV T+ + + Y+D R Sbjct: 61 LFRFSNNLTMVSHLRMEGKYY----NQPIGGPIDKHTHVVFQFTDGS-----ELCYHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+TLGPEP F + + H+ +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEKTVGGLKTLGPEPTAADFKLDFFRDELHRSRGKIKPFLLNQQHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + SL + + L I K L A G+++ + Sbjct: 172 GNIYADEVLWMSKINPEQPANSLSPDQ------VQALHDNIIKELAVATKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGGFQERLNAYGRGGEKC-PRCGTKMVKIKVAQRGTTFCPHCQ 272 >gi|39996100|ref|NP_952051.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|81702906|sp|Q74EG5|FPG_GEOSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39982865|gb|AAR34324.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|298505115|gb|ADI83838.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens KN400] Length = 271 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VT + LR P G+ I V RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHVTGRRVTAVTARAAKLRLPIPPELGERLTGRVIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+ + I+HLGM+G+ + +++H+ + L + + + DPR Sbjct: 61 LLR-CGDGTAIIHLGMTGTLRVAPAGSP----PGKYDHLDLVLDDGRT-----LRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + S +P L LGPEP FN YL + K+N+ +K L++ +IV G+ Sbjct: 111 KFGLVLW-TGSDPLAHPLLAQLGPEPFPPLFNGSYLFSRSRKRNAAIKLLLMDNRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA++ P R SL + + L + VL DAI G ++L +++ Sbjct: 170 GNIYANEALFRARIHPERAAGSLSEED------CATLATAVGDVLRDAIAEGDTTLHEFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GYF+ +VYG+TG+PC + CG I RI RST++C CQK Sbjct: 224 ATEVPSGYFRINPAVYGQTGKPC-TVCGTPIARIRLGNRSTWFCPVCQK 271 >gi|149182833|ref|ZP_01861294.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] gi|148849448|gb|EDL63637.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] Length = 274 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + + + + D F + +G+ I V RR K Sbjct: 1 MPELPEVETVRRTLAELVTGKRIKSVSVFWPKMVKLPDEVEEFKLSLQGETIQGVDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+++ + ++ HL M G + + + +H HV + T + Y D Sbjct: 61 FLILQTDRYS-LVSHLRMEGRYGVFPGD----EEVEKHTHVIFHFEDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP +F YLT + K +K LL+Q ++ Sbjct: 111 VRKFGTMHLFPKGEENLSLPLSQLGPEPFSPNFTVNYLTEKLAKTERAVKAVLLDQTVLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+ + P RK +S K + KL EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRSGIHPARKAKS------VKKSEMKKLHNEIIDTLSEAVEQGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ E C +CG+ I + V AGR T +C CQK Sbjct: 225 YVNSQGQIGMFQQQLFVYGRKNEEC-RSCGKPIEKNVTAGRGTHFCPNCQK 274 >gi|15902916|ref|NP_358466.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116515925|ref|YP_816340.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|148988414|ref|ZP_01819861.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|168491059|ref|ZP_02715202.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225858763|ref|YP_002740273.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|29611712|sp|Q8DQ33|FPG_STRR6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15458476|gb|AAK99676.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116076501|gb|ABJ54221.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|147926095|gb|EDK77169.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|183574637|gb|EDT95165.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225720028|gb|ACO15882.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|332076244|gb|EGI86710.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41301] Length = 274 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|325690758|gb|EGD32759.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK115] Length = 274 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTG-GVLISHLRMEGKYLFYPDAVPERT----HAHVFFEMTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------AKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCSSPIEKIKLGGRGTHLCPHCQK 272 >gi|254515835|ref|ZP_05127895.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] gi|219675557|gb|EED31923.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] Length = 270 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 143/289 (49%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + V + L LR+ P RG+ I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHSEGRQVVAVTLRDTRLRWPVPTSLPQMLRGQSILALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +++VHLGMSGS + A +H+H+ I L + + YNDPR Sbjct: 61 LFR-MDRGTLLVHLGMSGSLRVLLEPLA----PAKHDHIDIELDSGA-----LLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T PL LGPEP + F+ L + +K +++ V G+ Sbjct: 111 RFGSFQWFATGEPLA--PLGKLGPEPLSDDFHGGRLFDLSRGRKIAIKPFIMDGATVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + L I++VL +AI+ GG++LRD+V Sbjct: 169 GNIYASEALYLAGIRPDRAASRVSRVR------YELLAGHIKQVLTNAIEQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG +R V R++ YC CQ+ Sbjct: 223 GGDGKPGYFAQQLYVYGRSGEPC-KACGTTLRDKVIGQRASVYCIACQR 270 >gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 273 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVTTPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TIMSHLRMEGKFRLMD----EKDEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP N+F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGENETRSIKKLGPEPLTNTFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + ++ + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVQPERPANSLSNKE------IKRIFEATISIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-VCGTPIEKIKLNGRGTHFCPHCQK 273 >gi|229169312|ref|ZP_04297022.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] gi|228614075|gb|EEK71190.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] Length = 276 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|319939215|ref|ZP_08013578.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] gi|319811611|gb|EFW07887.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] Length = 274 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADAFVLDLPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +I HL M G ++ + + +H+HV T+ +N ++Y D R Sbjct: 61 IFYLTNW-VLISHLRMEGKYLF----YPEEAQLTKHSHVIFHFTDGSN-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP ++ F+ K +K LL+Q +VAG+ Sbjct: 111 KFGTMELLRKERLTSYFTERKLGPEPTESDFHLPPFKAALKKSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +SL + L ++I VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARVAQSLNRAEM------KHLREQIIAVLQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|322372544|ref|ZP_08047080.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] gi|321277586|gb|EFX54655.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] Length = 273 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVLGRTILSVEVKVPKMVKTSYQSFLNELPGQRIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ H H+ L + + ++Y D R Sbjct: 61 IFD-FGQLIMISHLRMEGKYLLFTDQVPTNK----HFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F + + +K LL+QK+VAG+ Sbjct: 111 KFGTFDLLSKNQEEAYFTKKKLGPEPTKKAFKYASFERALMRSDKPIKPLLLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELSKA------AMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|229076088|ref|ZP_04209056.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] gi|228706951|gb|EEL59156.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] Length = 276 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215630|sp|A6TFM6|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 269 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTRT--LEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGMPVVGTKHAQRATFYCRQCQK 269 >gi|228967683|ref|ZP_04128703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792016|gb|EEM39598.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] Length = 276 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|89094942|ref|ZP_01167873.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] gi|89080808|gb|EAR60049.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] Length = 270 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + TVT++ + NLR+ P + +GK+I V RR KY+ Sbjct: 1 MPELPEVETTCRGISPHTVKKTVTELVIRNPNLRWPVPDFLESRVQGKQINSVGRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ +++HLGMSGS + + +H+HV L++ + DPR Sbjct: 61 LLQ-MDEGDVMIHLGMSGSLRMVRSDTP----PLKHDHVDFCLSDGN-----ALRLTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP FNA YL + +K +++ ++V G+ Sbjct: 111 RFGSVLWQPKGE--HHELLYKLGPEPLSEGFNAEYLKSCCDGRKVAIKQLIMDSQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ + L L+ EI+KVL AI+ GG++L+D+V Sbjct: 169 GNIYATEALFAAAIDPRRAAGNISRAR------LENLVVEIKKVLSAAIEQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ SVYG+ GEPC+ C + + R+T +C +CQ+ Sbjct: 223 GGDGKPGYFKQELSVYGRKGEPCVK-CMAPLTEVRLGQRATVFCKHCQR 270 >gi|228960855|ref|ZP_04122488.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798751|gb|EEM45731.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGAILEKTVVGGRGTHYCPICQ 273 >gi|300859742|ref|ZP_07105830.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] gi|300850560|gb|EFK78309.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] Length = 280 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F + I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLASQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|149019561|ref|ZP_01834880.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] gi|147930936|gb|EDK81916.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|92115085|ref|YP_575013.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Chromohalobacter salexigens DSM 3043] gi|91798175|gb|ABE60314.1| DNA-(apurinic or apyrimidinic site) lyase [Chromohalobacter salexigens DSM 3043] Length = 281 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I + + LR P + G +I ++ RRAKYL Sbjct: 11 MPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRIGELGRRAKYL 70 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G +++ HLGMSGS + +H+HV + L + Y+DPR Sbjct: 71 LM-PVGAGTLLWHLGMSGSLRLARLGD----LPRKHDHVDLVLEGGAI-----LRYHDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+D + P L LGPEP F+ L K+ +K L++ +V G+ Sbjct: 121 RFGFVDWL-QGSPLDDPRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGV 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L + + VL AI GG++LRD+V Sbjct: 180 GNIYASEALFLAGIDPRRAAGRISRER------YERLAEAARDVLAAAITQGGTTLRDFV 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF +VYG+ PC CG+++R + R++ +C +CQ+ Sbjct: 234 SGTGEPGYFAQRLNVYGRHDAPC-RRCGELLRLVTLGQRASVFCPHCQR 281 >gi|229099046|ref|ZP_04229980.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] gi|229118077|ref|ZP_04247436.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228665300|gb|EEL20783.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228684274|gb|EEL38218.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] Length = 276 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL Q + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTQEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|209966315|ref|YP_002299230.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] gi|229541080|sp|B6IVU4|FPG_RHOCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209959781|gb|ACJ00418.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] Length = 290 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 130/299 (43%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + + +R +LRF P F+A G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEMKIAGRVLVRVAQYRPDLRFPLPERFAARLTGLRVAGLFRRAKYL 60 Query: 61 LIE----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT-KKYRVI 115 LI EG L +VHLGMSG+ ++ P H+H+ + + V Sbjct: 61 LIRLEGSAEGPLVWLVHLGMSGTLVVRRGPPGPPG---PHDHLVFETDPPPGEAQGWVVT 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YND RRFGFMDL +L +P L LGPEP N F+A L+ + K + +K ALL+Q Sbjct: 118 YNDVRRFGFMDLFPEALLDSHPMLACLGPEPLGNGFDAEELSRRLAGKITPIKAALLDQT 177 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCE+L+RA +SP R ++ +L+ I+ VL +AI AGGSS Sbjct: 178 VVAGLGNIYVCESLFRAGISPRRLAHTVAGRRAG------RLVPAIRDVLTEAIAAGGSS 231 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQK 289 LRDYV DG +GYFQ++F VYG+ GEPC I RIVQ+GRSTFYC Q+ Sbjct: 232 LRDYVQSDGELGYFQHSFKVYGREGEPCPGCDCDPVRTGGIARIVQSGRSTFYCPRHQR 290 >gi|119897050|ref|YP_932263.1| formamidopyrimidine-DNA glycosylase [Azoarcus sp. BH72] gi|119669463|emb|CAL93376.1| MutM protein [Azoarcus sp. BH72] Length = 272 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ ++ + + LR P + + G+ + VSRRAKYL Sbjct: 1 MPELPEVETTCRGVRPHVEGRRLSAVVVRNPRLRVPVPDNLAQLAAGQVLASVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ ++VHLGMSGS + +H+H+ + + + DPR Sbjct: 61 LLD-FDRGGLVVHLGMSGSLRVVAAGEP----AGKHDHLDLVFGETS------LRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L LGPEP D++F+A Y + +K+ L++ + V G+ Sbjct: 110 RFGMVLWQEGGAV-AHPLLAGLGPEPLDDAFDARYWVAATRGLRAPIKHVLMDGRRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P+ ++ +L+ +++ L +AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRSRIHPLEPAGAIGPQR------AARLVLAVKETLTEAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + Y + GE C CG +IRR V R+TF+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFAYDREGEAC-RVCGSVIRRFVSGQRATFFCPRCQR 270 >gi|148998594|ref|ZP_01826034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|168575632|ref|ZP_02721568.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|307067627|ref|YP_003876593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] gi|147755592|gb|EDK62639.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|183578675|gb|EDT99203.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|306409164|gb|ADM84591.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDTYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|149006353|ref|ZP_01830065.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|168485922|ref|ZP_02710430.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225861143|ref|YP_002742652.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298229554|ref|ZP_06963235.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254477|ref|ZP_06978063.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503020|ref|YP_003724960.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|147762130|gb|EDK69092.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|183570931|gb|EDT91459.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225727344|gb|ACO23195.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298238615|gb|ADI69746.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|327389248|gb|EGE87593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA04375] gi|332075586|gb|EGI86054.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17545] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|238764332|ref|ZP_04625283.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] gi|238697483|gb|EEP90249.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] Length = 269 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQQVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKT-GWIIVHLGMSGSLRI----LSEETEAEKHDHVDLVISNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP N F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWAK--DLETSSVLAHLGPEPLSNEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + T L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTEAEVTQ------LVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RCCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|145590096|ref|YP_001156693.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048502|gb|ABP35129.1| DNA-(apurinic or apyrimidinic site) lyase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 278 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + + ++ T++ I + LR+ P G+KI ++RR KYL Sbjct: 1 MPELPEVEVTKLGIAPHLQGRTISAIKVIDGRLRWPVPKSLPQILPGQKIQSIARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL +++HLGM+G+ + +S + H+ VT + + +DPR Sbjct: 61 LLEL-EKGCLLIHLGMTGTLRVLPSSEPLKL----HDRVTFEF------GRLSLRLHDPR 109 Query: 121 RFGFMDLVET------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +FG + S + L K++ +K LL Sbjct: 110 KFGAVLWHPKIKGPVESNPLLLKLGVEPFSSAFEGELGTGILYQASRKRSVAVKQFLLAG 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V G+GNIY E+L+ A + P + L + +L ++ +L AIDAGGS Sbjct: 170 QAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQ------CSRLASAVRSILKKAIDAGGS 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +L+D+V+ DG G+F VY + G PC C I++IVQ RST++C CQK Sbjct: 224 TLKDFVNSDGDPGHFTVQSKVYDRKGLPC-KVCKTPIQQIVQGQRSTYFCPVCQK 277 >gi|225854474|ref|YP_002735986.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] gi|225723258|gb|ACO19111.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQYALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|86147282|ref|ZP_01065597.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] gi|85834997|gb|EAQ53140.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] Length = 269 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQELKK-LEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDT-GTAIVHLGMSGSLRVLDADFP----PAKHDHVDLKLTNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGAWLWSAPDEIHTV--LLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + + L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKVTKQEWL------LLTKEIKQVLTTAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCEELIQELKIGQRNTFYCSSCQ 268 >gi|261867142|ref|YP_003255064.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412474|gb|ACX81845.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D11S-1] Length = 285 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAE-LHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I H+H+ I + N + YNDPR Sbjct: 74 VIHT-EQGYIIGHLGMSGTVRIVFHGSPIDK----HDHLDIVVNNGK-----LLRYNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + HKK + LK L++ +V GI Sbjct: 124 RFGAWLWTEKLDEFHLFL--KLGPEPLSEEFNAEYLFKKLHKKTTALKTVLMDNTVVVGI 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 182 GNIYANESLFLCGLHPLKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 236 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|163790756|ref|ZP_02185182.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] gi|159873936|gb|EDP68014.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] Length = 279 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ + ++ + F G+KI RR K Sbjct: 1 MPELPEVETVRKGLEKLVLGATIKSVDVYWDRIIAGSIESTEFKQLLIGEKITGFDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++ + +++ HL M G + +E ++ +H HV L + + + Y D Sbjct: 61 YIVFHFKNW-ALVSHLRMEGKYEVEESTVPL----KKHTHVVFHLADGRD-----LRYLD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV +Y +R LGPEP +F+ + K +K LL+QKIVA Sbjct: 111 VRKFGRMTLVPLGEEYSMTGIRLLGPEPTKEAFDETTFFNTLLTKKRAIKPLLLDQKIVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ AK+ P+R S K + +L + I KVL DA+ AGG+++R Sbjct: 171 GLGNIYVDEALFAAKIHPLRMANS------LKKQEVSQLHEAIIKVLGDAVKAGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G G FQ SVYGK G PC+ CG I +I A R T +C +CQ Sbjct: 225 YQNALGEAGKFQVKLSVYGKKGIPCI-RCGTPIEKIKVAQRGTHFCPHCQ 273 >gi|125623242|ref|YP_001031725.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris MG1363] gi|55669903|pdb|1TDZ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|124492050|emb|CAL96978.1| Fpg protein [Lactococcus lactis subsp. cremoris MG1363] gi|300069992|gb|ADJ59392.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris NZ9000] Length = 272 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 143/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + H+H+T+ + +IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPREK----HDHLTMKFADGQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++T LI++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|15900847|ref|NP_345451.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|111657968|ref|ZP_01408675.1| hypothetical protein SpneT_02000857 [Streptococcus pneumoniae TIGR4] gi|149010384|ref|ZP_01831755.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182683916|ref|YP_001835663.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|303254437|ref|ZP_07340543.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|303259882|ref|ZP_07345857.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|303262296|ref|ZP_07348240.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|303264718|ref|ZP_07350636.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] gi|303267325|ref|ZP_07353185.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|303269130|ref|ZP_07354909.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|21362546|sp|Q97R61|FPG_STRPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14972445|gb|AAK75091.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|147764865|gb|EDK71794.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182629250|gb|ACB90198.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|301801813|emb|CBW34524.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV200] gi|302598604|gb|EFL65644.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|302636619|gb|EFL67110.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|302639087|gb|EFL69547.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|302641317|gb|EFL71685.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|302643135|gb|EFL73422.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|302645805|gb|EFL76034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|307708605|ref|ZP_07645069.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] gi|307615354|gb|EFN94563.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] Length = 274 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTNLDEFQKEVPGQIVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LF-CLTDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFQFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELFAPDLLEAYFISKKLGPEPSEQEFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTTEEAS------AIHDQTISVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C CG +I ++ GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQECA-RCGTVIEKMQLGGRGTHFCPNCQR 272 >gi|253991835|ref|YP_003043191.1| formamidopyrimidine-DNA glycosylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783285|emb|CAQ86450.1| formamidopyrimidine DNA glycosylase [Photorhabdus asymbiotica] Length = 269 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMT-LSDRLVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL II+HLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LIEL-AEGWIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMADGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ Q L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SNDLNQCSVLTHLGPEPLSDDFNGAYLYARSRNKKTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L + +Y L++ I+KVL +I+ GG++LRD++ Sbjct: 168 GNIYANEALFTAHIQPERPAHTLAERE------VYLLVETIKKVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+TGEPC CG I I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRTGEPC-RICGGNIASIKLGQRSTFFCCHCQ 268 >gi|194398197|ref|YP_002037605.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] gi|194357864|gb|ACF56312.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] Length = 274 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LF-CLTDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFRFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|304310176|ref|YP_003809774.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] gi|301795909|emb|CBL44110.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] Length = 270 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ ++ + V + + + LR+ G+ + D++RR KYL Sbjct: 1 MPELPEVETTRRGILPHIQGLRVQQVIVRQPKLRWPVSPELVQ-LAGEPLRDIARRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ HLGMSGS I + H+H+ N + Y+DPR Sbjct: 60 LF-SFDRGIVLAHLGMSGSLRILESEKPADA----HDHLDWVFENG-----ITLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L +LGPEP + F A YL + +K+ ++N +V G+ Sbjct: 110 RFGAWLWWD-GESTGHPLLESLGPEPLEPDFTAQYLYRTSRGRKVPVKSFVMNSHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP+R + +L++ I+K+L D+I GG++LRD+V Sbjct: 169 GNIYANEALFSAGISPLRAAGRISLER------YQRLVESIRKILEDSIRQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ G PCL CG+ + I R+T +C CQ Sbjct: 223 GGDGKPGYFQQTLQVYGRAGAPCLK-CGESLCEIRLGQRTTVFCKVCQ 269 >gi|2293273|gb|AAC00351.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis] Length = 278 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 64 LLFHL-DHYVMVSHLRMEGKYGLHQAEEPDDK----HVHVIFTMTDGT-----QLRYRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 228 INSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|229105214|ref|ZP_04235863.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] gi|228678140|gb|EEL32368.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] Length = 276 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQGKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|229163578|ref|ZP_04291527.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] gi|228619828|gb|EEK76705.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] Length = 276 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+ I +V RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVVVTYPKIVKRPDDAEIFKEMLKGETIENVKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPKYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|329896521|ref|ZP_08271579.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] gi|328921738|gb|EGG29111.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] Length = 271 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N + ++ + LR+ P ++A G + + V RRAKY+ Sbjct: 1 MPELPEVETTCRGIEPHVLNKPICNVLVRDTRLRWPVPADLASALVGGQFLRVERRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + ++ HLGM+GS I H+HV I + + Y+DPR Sbjct: 61 VLH-HTDGFVLAHLGMTGSMRIVAAGEPVKT----HDHVDICFDDGAI-----LRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L TLGPEP + F+ L + K +K +++ K+V G+ Sbjct: 111 RFGSIHWIA-GQDLGHPLLDTLGPEPLSDDFSGRALYARSRGKTQAVKLFIMDAKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L Q I+++L AI GG++LRD+V Sbjct: 170 GNIYANEALFAAGIDPRRAAGKVSLAR------YQDLAQHIKRILSYAIARGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ +VYG+ G PC++ C + + + R+T +CT CQ+ Sbjct: 224 GGDGKPGYFKQELTVYGRAGLPCVT-CSKPLHEVRLGQRTTVFCTACQR 271 >gi|238028664|ref|YP_002912895.1| formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] gi|237877858|gb|ACR30191.1| Formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] Length = 275 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + +AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVTGRRVRRVDVRTATLRWPVPDNLAAALEAREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + DPR Sbjct: 61 LFEVDA-GWFIVHLGMTGTLRVLPGGEPPEAR--KHDHIDWVFDE------CVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E+ +++P L +LG EP F L + + ++K ALL IV Sbjct: 112 RFGAVLWHARESGDIHRHPLLTSLGVEPFSPLFTPELLFRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YQRLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|229843992|ref|ZP_04464133.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] gi|229812986|gb|EEP48674.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] Length = 271 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEELIT-LKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVINNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|119475393|ref|ZP_01615746.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] gi|119451596|gb|EAW32829.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] Length = 282 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P S+ + +KI+ V RRAKYL Sbjct: 12 MPELPEVETTRRGISPYVQGRIVKQLVVRQPKLRWLIPPQLSSLIKNRKILSVERRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N SII+HLGMSGS I S H+HV L + + + DPR Sbjct: 72 LLRL-DNGSIIIHLGMSGSLRIIDASEP----PMAHDHVDFVLDDG-----VAMRFTDPR 121 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + + + + L +LGPEP F+ L + + + +K L++ K V G+ Sbjct: 122 RFG-CVLWQGASEPIHSLLASLGPEPLSLDFDGDLLYQRSRGRKAPVKTFLMDNKNVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + + L +++KVL AI+ GG++LRD+V Sbjct: 181 GNIYANEALFAAGIKPNRASGRISRQRYQV------LADQVKKVLAQAIEQGGTTLRDFV 234 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ A VYG+ G+PC+ C Q + I RST YC +CQ+ Sbjct: 235 GGDGKPGYFKQALKVYGRGGKPCV-ICDQHLIEIRLGQRSTVYCRHCQR 282 >gi|229013789|ref|ZP_04170917.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] gi|228747458|gb|EEL97333.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDVEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|329117411|ref|ZP_08246128.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] gi|326907816|gb|EGE54730.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] Length = 274 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ ++ + + N+ F A +G+ I VSRR KYL Sbjct: 1 MPELPEVETVRRGLEQLVRGKVISQVTVKVPNMVKYDCLAFELALKGQTIEAVSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G L +I HL M G +++ + + +H HV + T+ + ++Y D R Sbjct: 61 IFDL-GQLVMISHLRMEGKYLLFND----FVPVNKHFHVFFTFTDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+E S ++ + +GPEP F +K LL+Q +VAG+ Sbjct: 111 KFGTFNLIEKSQLDRFFLEKKIGPEPTKADFKLKPFERALLSSQKIIKPWLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P++ + SL + + ++ + +L ++ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPMKLSNSLKKAE------IKRIHDQAIAILALGVEMGGSTVRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ +PC CG I++I AGR T +C CQK Sbjct: 225 NTLGMNGSMQDYLMVYGQKDKPC-PRCGTAIQKIKVAGRGTHFCPRCQK 272 >gi|332202825|gb|EGJ16894.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41317] Length = 274 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|291485341|dbj|BAI86416.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. natto BEST195] Length = 278 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + ++ HL M G + + H HV ++T+ T ++ Y D Sbjct: 64 LLFHL-DHYVMVSHLRMEGKYGLHQAEEPDDK----HVHVIFTMTDGT-----QLRYRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K L + L I+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAGIKNTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 228 INSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|56964473|ref|YP_176204.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] gi|81678825|sp|Q5WEG7|FPG_BACSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56910716|dbj|BAD65243.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++KN T+ D+ + + + F +G+ I D+ RR K Sbjct: 1 MPELPEVETVRRTLLQLVKNKTIADVDVGWPKMIKEPDDVERFIQLLKGQTIEDIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL + + ++ HL M G + + + K H HV S T+ + + Y D Sbjct: 61 FLLF-VLNDYVLVSHLRMEGRYGLYQPTDEKTK----HTHVVFSFTDGS-----ELRYAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LG EP F L + K +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGAEHVAMPLAQLGVEPFSEQFTVELLEQAYAKTTRAIKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R SL + + L +EI++ L +AI+AGGSS++ Sbjct: 171 GLGNIYVDEALFHAGIHPERTASSLSKEE------YHNLHKEIKRTLKEAIEAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ +PC C I + V GR T YC CQ Sbjct: 225 YVNGQGEIGMFQQQLHVYGRKQQPCHH-CDTAIEKTVVGGRGTHYCPNCQ 273 >gi|58337812|ref|YP_194397.1| formamidopyrimidine-DNA glycosylase [Lactobacillus acidophilus NCFM] gi|227904461|ref|ZP_04022266.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] gi|75507557|sp|Q5FIV8|FPG_LACAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58255129|gb|AAV43366.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus NCFM] gi|227867836|gb|EEJ75257.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPTIVATDHDEFLKELPGKKIIGIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H+HV T+ K + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTEDAPKDK----HDHVEFVFTD-----KTALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q ++ LGPEP + F+ YL KK+ N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLIITGTERQVTGIKKLGPEPNTSEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ P + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHPLSIANK------IPAKKVAGLWENINQTIALAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHVGEEC-PRCGNIFEKIKVSGRGTTFCPHCQ 272 >gi|229135421|ref|ZP_04264208.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] gi|228647982|gb|EEL04030.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTKEE------VERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|315612999|ref|ZP_07887910.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] gi|315315109|gb|EFU63150.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] Length = 274 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEITYPKMIKTDLKEFQKEVPGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALSKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGAVIEKFQLGGRGTHFCPQCQR 272 >gi|148260719|ref|YP_001234846.1| formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] gi|166215604|sp|A5FZ95|FPG_ACICJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146402400|gb|ABQ30927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] Length = 275 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTIDSAPLP-------HQHLTLETDDGA-----VIGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGR------AGRLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC C I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPC-ERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|169833803|ref|YP_001694415.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] gi|168996305|gb|ACA36917.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] Length = 285 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 12 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 72 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 121 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 122 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 182 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GRST +C CQ+ Sbjct: 236 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRSTHFCPNCQR 283 >gi|332289053|ref|YP_004419905.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] gi|330431949|gb|AEC17008.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] Length = 285 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + K+ + + + + LR+ ++I+DV RRAKYL Sbjct: 1 MPELPEVETTRKGIQPYTKHQQLVKLVIRTEKLRWVVSKELYQ-IENEEILDVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L IIVHLGMSGS + A H+H+ + L+N + YNDPR Sbjct: 60 IFQL-EYGYIIVHLGMSGSLRVVTAKDAIDK----HDHIDMVLSNGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG T +P L PEP + FN YL + +++ +K+ L+N +V G+ Sbjct: 110 KFGAWLW--TDSIEHFPLFSKLAPEPLSDEFNGEYLYQKSRNRHTAVKSWLMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ + P SL + + +L+ I++ L AI GG++L+D++ Sbjct: 168 GNIYANEVLFNCGIYPNAPVSSLSKED------CERLVANIKQTLQQAIKQGGTTLQDFI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ + +VYG+ GE C CG +I + RS+FYC CQ Sbjct: 222 QPDGRPGYFQQSLNVYGRKGENC-PTCGHLIEMVTIGQRSSFYCPICQ 268 >gi|324328478|gb|ADY23738.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIITYPKIVKRPDDAEIFKEMLKGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPINK----HTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|288553688|ref|YP_003425623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus pseudofirmus OF4] gi|120474|sp|P19210|FPG_BACFI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39475|emb|CAA37877.1| unnamed protein product [Bacillus firmus] gi|288544848|gb|ADC48731.1| formamidopyrimidine-DNA glycosylase [Bacillus pseudofirmus OF4] Length = 274 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 141/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ T+ I + N+ + F + I + RR K Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL E + + + HL M G + + P H HV T+ + Y D Sbjct: 61 FLLFEFDDIVMV-SHLRMEGRYGLYEKEEPL----PPHTHVIFHFTDGE-----ELRYQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + L + F K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P R SL + L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRARIHPERLAHSLSKEEMAV------LHKAIVSTLEEAVEMGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ EPC CG I + V GR T +C CQ Sbjct: 225 YVNGQGEMGMFQQKLGVYGRKNEPC-RQCGTDILKTVVGGRGTHFCPNCQ 273 >gi|228478179|ref|ZP_04062787.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] gi|228249858|gb|EEK09128.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] Length = 273 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSVEVKVPKMIKTSYDSFLHDLPGLTVQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ + +H H+ +L + + ++Y D R Sbjct: 61 IFD-FGQLIMISHLRMEGKYLLF----TDQVPANKHFHLFFTLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F +K+ LL QK+VAG+ Sbjct: 111 KFGTFDLLAKNQEEVYFARKKLGPEPTKKAFKYAPFERALMTSAKPIKSLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELSKA------AMKRVHDRTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|225728858|ref|YP_002735122.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] gi|222113497|emb|CAR41256.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] Length = 273 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTVKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ + H T ++Y D R Sbjct: 61 IFH-FTDLVMVSHLRMEGKYLLFEGGIPENKHFHFFFH---------FTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L + + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASELKKAE------VKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|326403916|ref|YP_004283998.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] gi|325050778|dbj|BAJ81116.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] Length = 275 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTIDSAPLP-------HQHLTLETDDGAI-----IGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGR------AGRLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC C I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPC-ERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|212638360|ref|YP_002314880.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] gi|212559840|gb|ACJ32895.1| Formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] Length = 273 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L+ ++ T+ + +H + F +G+ I ++ RR K+ Sbjct: 1 MPELPEVETVRLTLLPLVVGKTIERVKVHWPKIIQHPDVATFCERLKGQTIHNIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ ++ HL M G +I E QH H+ + T+ T + Y D Sbjct: 61 LLFQLDDV-VLVSHLRMEGRYIYEKEDAP----FDQHTHIFFTFTDQT-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PPL ++G EP D F +LT Q + +K LL+Q IVAG Sbjct: 111 RKFGTMHLFSKGEELHVPPLSSIGVEPFDEQFTVAWLTDQLQRTKRTIKATLLDQTIVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R+ + P R +L + L + I + + +AI+ GGS++R Y Sbjct: 171 LGNIYVDEVLFRSSIHPERTAATLTIRE------IEALHEAIVQTIQEAIEKGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ G IG FQ VYG+ +PC CG+ I + A R T YC +CQ Sbjct: 225 VNTQGKIGKFQTQLYVYGRVNKPC-RRCGEPIVKTTVANRGTHYCKHCQ 272 >gi|55820699|ref|YP_139141.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116627506|ref|YP_820125.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMD-9] gi|81676735|sp|Q5M576|FPG_STRT2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55736684|gb|AAV60326.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116100783|gb|ABJ65929.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Streptococcus thermophilus LMD-9] gi|312278025|gb|ADQ62682.1| Formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus ND03] Length = 273 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFD-FGQLIIISHLRMEGKYLLF----TDQVPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLS------KAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|253997189|ref|YP_003049253.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] gi|253983868|gb|ACT48726.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] Length = 271 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ +++ TV + + +LR+ P + + +G+ + ++RRAKY+ Sbjct: 1 MPELPEVETTRLGLLSLVE-QTVAQVVIRNPSLRWPIPDNLADLLQGQTLRALTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +++HLGMSG + AK +H+H + T+ + DPR Sbjct: 60 LAH-FDHGVLLLHLGMSGRICL----LAKNETAQKHDHFDLVFTDGQ-----VLRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + Q+ L LGPEP D++F YL + + +K +++ +V G+ Sbjct: 110 RFGAVLW-AGEHYTQHKLLSVLGPEPLDDAFTGAYLQQHIRTRTAAIKTTIMDGHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA+++P L L+ EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARINPATPANKLNLRQ------CETLVAEIKATLSDALKAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VYG+TGEPC CG+ I I Q RSTFYC CQK Sbjct: 223 GTDGNPGYFQQQYFVYGRTGEPC-RVCGKHILNIKQGQRSTFYCGVCQK 270 >gi|254284042|ref|ZP_04959010.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] gi|219680245|gb|EED36594.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] Length = 268 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +V + + LR+ P G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHVIGQSVVAVDVRDSRLRWPVPDDL-DRLVGGRFTAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + +++HLGMSGS + H+HV I L++ + Y+DPR Sbjct: 60 LLD-HDHGVLMIHLGMSGSLRLVSADTPVM----FHDHVDIGLSSG-----LTLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V + L LGPEP F+ L + + + +K +++ +IV G+ Sbjct: 110 RFGSFHWV---DDDHHALLDHLGPEPLSGDFDGALLYRRSRGRKTAVKQFVMDGRIVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L I++VL AI+ GG++LRD+V Sbjct: 167 GNIYANEALFMAGIRPDRAAGRVALKR------YETLGDAIKQVLGGAIEQGGTTLRDFV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYF +VYG+ +PC C + GRST +C CQ+ Sbjct: 221 GGDGSPGYFAQQLAVYGRARQPC-RRCESALTETRLGGRSTVFCKTCQR 268 >gi|306825397|ref|ZP_07458737.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432335|gb|EFM35311.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 274 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDLDEFQREVPGQVIESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + I +H HV I + ++Y D R Sbjct: 61 LF-FLTDKVLISHLRMEGKYFY----YPDQIPERKHAHVLIHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + +F+ K +K+ LL Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPREKNFDLQSFQVALAKSKKPIKSHLLAQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R ++SL + T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQSLTEEEAT------AVHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTIIEKFQLGGRGTHFCPQCQR 272 >gi|146386274|gb|ABQ23941.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis] Length = 273 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTIKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ + H T ++Y D R Sbjct: 61 IFH-FTDLVMVSHLRMEGKYLLFEGGIPENKHFHFFFH---------FTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L + + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASELKKAE------VKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|154687040|ref|YP_001422201.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens FZB42] gi|154352891|gb|ABS74970.1| MutM [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 202 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + N+ P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + ++ HL M G + + H HV +T+ T ++ Y D Sbjct: 64 LLFHL-DHYVMVSHLRMEGKYGLHQADEPDDK----HVHVVFHMTDGT-----QLRYRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA++ P K SL + L EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRARIHPETKANSLSDGQ------IKTLHTEIKDTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 228 INSQGEIGMFQLKHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 276 >gi|157693308|ref|YP_001487770.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus SAFR-032] gi|157682066|gb|ABV63210.1| DNA-formamidopyrimidine glycosylase [Bacillus pumilus SAFR-032] Length = 276 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + +H HV + T+ T + Y+D Sbjct: 61 FLLFHL-DHYVMVSHLRMEGKYRVHEA----HEPYDKHVHVVFTFTDGT-----ELRYHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L L ++I L A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLSLE------SCKVLHKQIIDTLQVAVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC + CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPCQT-CGSIIEKTVVGGRGTHFCVTCQK 274 >gi|297539278|ref|YP_003675047.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] gi|297258625|gb|ADI30470.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] Length = 271 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ + V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTRRGLLP-LVGKVVKSVTIRHPTLRWPIPQSLLQILPNQVLRGLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++++HLGMSG + T+ +H+H I T+ + DPR Sbjct: 60 LCE-YDTGTLLLHLGMSGRVQLLDTNYP----AEKHDHFDIEFTDGQ-----VLRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + + L +LGPEP + FNA YL K+ +KNA+++ +V G+ Sbjct: 110 RFGAVLWID-NKENHHVLLNSLGPEPLEEGFNAKYLHAALSNKSLVIKNAIMDGHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L KL+ EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPETAANKLTLRQ------CEKLVVEIKSTLNDALSAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+IGYFQ + VY +T EPC C + I+ I RSTFYC CQK Sbjct: 223 GVDGNIGYFQQEYFVYARTDEPC-KVCTKPIKCIRLGQRSTFYCEKCQK 270 >gi|296132484|ref|YP_003639731.1| formamidopyrimidine-DNA glycosylase [Thermincola sp. JR] gi|296031062|gb|ADG81830.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR] Length = 275 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++R+L + ++ + + K ++ F G++I+++ RR KY Sbjct: 1 MPELPEVETVKRSLEEKLLGKSIQHVDIFMDKVIKEPSVEEFQQILAGREILNLGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L G +I+ HL M+G I + + +H H+ L+++ + + D Sbjct: 61 LLLYLSGGYAIVFHLRMTGQLIYSERTAVR----AKHTHLVFHLSDDN-----ELRFTDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L+ + LRT+G EP F +L + +K + +K LL+Q +AG Sbjct: 112 RQFGRVYLLPDDQLDKITGLRTMGVEPLTEEFTKEFLKKELKRKRTKIKALLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+RAK++P R +L Q + +L + I +VL + I+ G+S++DY Sbjct: 172 IGNIYADEALFRAKINPERLASTLNQRE------ISRLHRAIVEVLTEGIENRGTSIKDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G +Q+ VYGK +PC CG +I R GRS++YC CQK Sbjct: 226 VDGEGKSGNYQDLLKVYGKEEKPC-PVCGSVILRKKIGGRSSYYCGRCQK 274 >gi|229019808|ref|ZP_04176610.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] gi|229026034|ref|ZP_04182417.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228735250|gb|EEL85862.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228741479|gb|EEL91677.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] Length = 276 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|227520125|ref|ZP_03950174.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] gi|227072415|gb|EEI10378.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] Length = 280 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTSEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N I HL M G + + +H HV + T+ T ++ Y D Sbjct: 61 LIFKLSDNDMI-SHLRMEGKYEFHQADD----EIAKHTHVMFTFTDGT-----QLRYLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPVE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|93279449|pdb|2F5Q|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc2 gi|93279452|pdb|2F5S|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc1 Length = 274 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MP+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|229032230|ref|ZP_04188203.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] gi|228729010|gb|EEL80013.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] Length = 276 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDVEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R++ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPERESSSLTAEE------VERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|163942319|ref|YP_001647203.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] gi|163864516|gb|ABY45575.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] Length = 276 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPQIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEP----IDKHTHVRFLFTDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTKEE------VERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|163858324|ref|YP_001632622.1| formamidopyrimidine-DNA glycosylase [Bordetella petrii DSM 12804] gi|229541069|sp|A9I6Y3|FPG_BORPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163262052|emb|CAP44354.1| fpg [Bordetella petrii] Length = 275 Score = 202 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 147/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGKTLRRLLVRESRMRWPIPADLPGLLSGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS A +H+HV + T + +DPR Sbjct: 61 LLR-FEHGTQIVHLGMSGSLRSVPAGEA----PRKHDHVDWIFDHAT------LRLHDPR 109 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L QF + +K ALL V Sbjct: 110 RFGAVLWHPDTAGPIAAHPLLARLGIEPFDPRFDGAWLHSQFRNRAIAVKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P R + + +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTPARRISRAR------CARLADMVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G PC CG IRR+VQ R+T+YC CQK Sbjct: 224 YVGASGQPGSYFEIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYYCPSCQK 274 >gi|332522287|ref|ZP_08398539.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] gi|332313551|gb|EGJ26536.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] Length = 273 Score = 202 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ V + + + F++ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVIGKVVASVTVKVPKMIVSNSETFASDLIGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +I HL M G +++ + T ++Y D R Sbjct: 61 IF-NFSDLVMISHLRMEGKYLLFEDGIPENK---------HFHFFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F +K LL QK+V G+ Sbjct: 111 KFGTLELLARDGLDLYFSQRKLGPEPTKNEFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P+R + K + ++ + +L A++ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLASN------LKKVEMKRIHDQTIVILNFAVNKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG +I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQNGRPC-PRCGTVIEKIKVGGRGTHFCPKCQK 272 >gi|254784434|ref|YP_003071862.1| formamidopyrimidine-DNA glycosylase [Teredinibacter turnerae T7901] gi|259647151|sp|C5BLG1|FPG_TERTT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|237685174|gb|ACR12438.1| DNA-formamidopyrimidine glycosylase [Teredinibacter turnerae T7901] Length = 272 Score = 202 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + +T + L LR+ S G+ ++ RR KYL Sbjct: 1 MPELPEVETTRRGIAPHILHHPITAVTLRHTQLRWPIDKALSRNLPGRTLVRADRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ ++I HLGMSGS I + +H+H+ + + + Y+DPR Sbjct: 61 LLAVDDGRTLIWHLGMSGSLRIVEPTEP----PGKHDHIDLRFAHGR-----VLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L Q+ + LGPEP + FN YL + K+++ +K+ +++ ++V G+ Sbjct: 112 RFGA-FLATADDPAQHALICHLGPEPLTDDFNGEYLYERSRKRSTAVKSWIMDSRVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P+R L + ++L I+ VL +I GG++LRD+V Sbjct: 171 GNIYANESLFLAKIHPLRAAGKLTR------PACHRLADIIKAVLARSITQGGTTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +VYG+ GEPC C + + + R+T YCT+CQ Sbjct: 225 GGDGKPGYFAQQLNVYGRGGEPC-PVCAKPLTEKPLSQRTTVYCTHCQ 271 >gi|148265694|ref|YP_001232400.1| formamidopyrimidine-DNA glycosylase [Geobacter uraniireducens Rf4] gi|189044594|sp|A5G7Q9|FPG_GEOUR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146399194|gb|ABQ27827.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens Rf4] Length = 271 Score = 202 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR + G+ I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLPLQPDLDSILSGRIISAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I+HLGM+G+ + +H+H+ + L + + DPR Sbjct: 61 LVRFTA-GTLILHLGMTGNLRLVQADTP----PGRHDHLDLVLNSG-----LCLRLTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF + ++ L GPEP F+ YL + + +K +++ +++AG+ Sbjct: 111 RFSTIVW-THDDPLRHTLLAKHGPEPLTGDFSGDYLYTKSRGRRITVKQFIMDSRVLAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL+RA + P +L +L I++VL DAI +GGS+L D++ Sbjct: 170 GNIYACEALFRAGIHPETPAGALST------THCLRLADTIKEVLTDAIASGGSTLGDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYF +FSVYG+ PC CG IRR Q GRST++C CQ Sbjct: 224 VSEGKPGYFPMSFSVYGRNDAPC-PGCGAPIRRSRQGGRSTYFCDRCQ 270 >gi|54293547|ref|YP_125962.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] gi|81679294|sp|Q5WYY6|FPG_LEGPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53753379|emb|CAH14832.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] Length = 274 Score = 202 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGCMITSVQVRNQKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSG I ++ +H+HV + + N + + DPR Sbjct: 61 LLH-MDKGYLLIHLGMSGHLRIV----SQTANPQKHDHVDLHINNG-----LALRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|261408691|ref|YP_003244932.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] gi|261285154|gb|ACX67125.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] Length = 277 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + ++ + R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRI-LLDGLVLVSHLRMEGRYGVYRAEEP----VEKHTHVIFHFSDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSLKDAE------LKRLYHAIVDTLSEAVDAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC CG I +IV GR T YC CQ Sbjct: 225 YVNGQGEMGMFQNSHQIYGRKDKPC-HACGGPIHKIVVGGRGTHYCPKCQ 273 >gi|148984712|ref|ZP_01817980.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|147923103|gb|EDK74218.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|301799946|emb|CBW32529.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae OXC141] Length = 274 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LF-CLTDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFRFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|48474237|sp|Q8VW76|FPG_PASPI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16904663|dbj|BAB71962.1| formamidopyrimidine-DNA glycosylase homolog [Photobacterium damselae subsp. piscicida] Length = 269 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S IVHLGMSGS + A +H+HV ++L++ + YNDPR Sbjct: 60 LLDT-PVGSAIVHLGMSGSLRVLPAGTA----PEKHDHVDLALSSGEI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP + F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDVFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEVTP------QALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC+ CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCSQCQQ 269 >gi|304414128|ref|ZP_07395496.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] gi|304283342|gb|EFL91738.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] Length = 269 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + + LR+ S+ R + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPYLVDQTLLYVVVRNPRLRWPVSEEISS-LRDQPVFSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSG I K +H+H+ + ++N + Y DPR Sbjct: 60 LLEL-AAGWIIIHLGMSGRLHI----LPKDRIAEKHDHIDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP F YL + K + +K L++ KIV GI Sbjct: 110 RFGAWLWAK--DFTASTVLAHLGPEPLGAEFTEQYLFEKSRHKRTLIKPWLMDNKIVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P SL QN L+ I+KVL+DAI+ GG++LRD++ Sbjct: 168 GNIYASECLFVAGILPTEPAGSLTQNE------CKLLVSAIKKVLLDAIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G PC C +I + Q RSTF+C +CQ Sbjct: 222 QSDGRPGYFAPRLQVYGRAGAPCY-RCTHLIETVKQGQRSTFFCRHCQ 268 >gi|59710737|ref|YP_203513.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] gi|75507118|sp|Q5E8M1|FPG_VIBF1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59478838|gb|AAW84625.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] Length = 272 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQK-LVGQRVQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ S I+HLGMSGS + +H+HV + L N + YNDPR Sbjct: 60 MIDT-PKGSAIIHLGMSGSLRVLDEEVPS----AKHDHVDLVLENGK-----VLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G+ Sbjct: 110 KFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P SL + + L+ EI+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAQIHPKTSVGSLKASQ------ITLLVAEIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ + CL C +I+ R+TF+C +CQ Sbjct: 222 QVDGKPGYFAQELHVYGRAKKKCLL-CSSIIQEEKIGQRNTFWCGHCQ 268 >gi|326405934|gb|ADZ63005.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis CV56] Length = 272 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRDLEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ +IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDEQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L ++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTES------SIHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|198284465|ref|YP_002220786.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665209|ref|YP_002427132.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226704425|sp|B7J8I7|FPG_ACIF2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689974|sp|B5ENT6|FPG_ACIF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198248986|gb|ACH84579.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517422|gb|ACK78008.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 270 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ + + LR +A G++++++ RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLRGRRLEGAVVRDSRLRLPVNDDLAARVSGQRLLNLRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +I++HLGMSG + S H+HV + ++ + ++DPR Sbjct: 61 LLDL-ERGTILIHLGMSGHLRVLPQSAPVQK----HDHVDLLFADD-----LCLRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L+ LGPEP + F A YL + + +K+ L++ IV G+ Sbjct: 111 RFGAVLWL--DDADHHPLLQHLGPEPLGDVFGAEYLYQRGRNRQIPVKSFLMDAHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + KL+Q ++ VL AI GG++LRD+ Sbjct: 169 GNIYANESLFAAGIDPRRPAGRIALPRYM------KLVQAVRTVLEAAIAQGGTTLRDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ + +VYG+ GEPC CG ++ + GR+T YC+ CQ+ Sbjct: 223 RPDGGNGYFRLSLAVYGREGEPCTH-CGAPLQGVRIGGRATIYCSQCQR 270 >gi|149192220|ref|ZP_01870436.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] gi|148833951|gb|EDL50972.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] Length = 269 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + T+ +I + ++ LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLLDETIKEIVVRQRQLRWLIPQEIHQ-LHGQAITSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + + +H+HV + L+N + YNDPR Sbjct: 60 LIDTDK-GTAIVHLGMSGSLRVLENPP----EAEKHDHVDLVLSNGK-----VMRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L GPEP F A +++ + K +K ++N V G+ Sbjct: 110 RFGAWLWCAPGE--SHELLANCGPEPLTEEFCADWMSEKARNKRVAVKTFIMNNANVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P + L+ EI++VL AI GG++L+D+ Sbjct: 168 GNIYACESLFSAGIHPTTPAYKVTLTQW------QLLVSEIKRVLAQAITQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG+ I ++ R+TF+C++CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRANEPC-HQCGEPIEQMKIGQRNTFFCSHCQQ 269 >gi|55822590|ref|YP_141031.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] gi|81676585|sp|Q5M0P0|FPG_STRT1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55738575|gb|AAV62216.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] Length = 273 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFD-FGQLIIISHLRMEGKYLLF----TDQVPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKELGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLS------KAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|290477292|ref|YP_003470213.1| formamidopyrimidine DNA glycosylase [Xenorhabdus bovienii SS-2004] gi|289176646|emb|CBJ83455.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus bovienii SS-2004] Length = 269 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 143/288 (49%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLTGNVIQYSEVRNSRLRWPVSEQIMK-LADQPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I +H+HV + + + + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRILLNESP----PEKHDHVDLIMADGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++F+ YL K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SDNLDECSVLAHLGPEPLSDAFDGEYLYTLSRHKKTVIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL Q Y L I+++L +I+ GG++L+D++ Sbjct: 168 GNIYANEALYVAHILPERPVNSLTQEE------AYLLADTIKQILHRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGELC-PTCGEKIESIKLGQRSTFFCRQCQ 268 >gi|77166106|ref|YP_344631.1| DNA-formamidopyrimidine glycosylase [Nitrosococcus oceani ATCC 19707] gi|254436060|ref|ZP_05049567.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] gi|90101306|sp|Q3J7U5|FPG_NITOC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|76884420|gb|ABA59101.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani ATCC 19707] gi|207089171|gb|EDZ66443.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] Length = 271 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 152/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLSLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II+HLGMSGS + T+ + +H+H+ I L N + +NDPR Sbjct: 61 LL-SCTQGTIILHLGMSGSLRLVTTNTP----HGKHDHLDIVLNNGRC-----LRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++ F+ YL + +++K ++N +IVAG+ Sbjct: 111 RFGSVSW-TQANPLHHPLLEILGPEPLESLFDGHYLFKHSRHRRTSVKAFIMNHRIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L + + VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHPRRSASRIGLAR------YQRLAETTKTVLYNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF N +YG++ PC CG IR R+++YCT CQ Sbjct: 224 TSDGKPGYFANQLQIYGRSAHPC-PICGTPIRLERIGQRASYYCTQCQ 270 >gi|116511212|ref|YP_808428.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11] gi|116106866|gb|ABJ72006.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactococcus lactis subsp. cremoris SK11] Length = 272 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I + RR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGILRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + H+H+T+ ++ +IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPREK----HDHLTMKFSDGQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVIPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++ L ++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKEANQLTES------SIHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|292486569|ref|YP_003529437.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|292897807|ref|YP_003537176.1| formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC 49946] gi|291197655|emb|CBJ44750.1| formamidopyrimidine-DNA glycosylase [DNA-(apurinic or apyrimidinic site) lyase] [Erwinia amylovora ATCC 49946] gi|291551984|emb|CBA19021.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|312170630|emb|CBX78893.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 269 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 145/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNNRLRWPVSQEIHT-LSDQPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + +++ + Y DPR Sbjct: 60 LLEL-PTGWIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSHGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP F A YL + + + +K L++ K+V G+ Sbjct: 110 RFGAWLW--CADLNGSSVLSHLGPEPLSEGFCARYLFEKSRGRRTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEQE------AGLLVSTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I A RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RVCALPIESSKHAQRSTFFCRRCQK 269 >gi|149002521|ref|ZP_01827455.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] gi|237650881|ref|ZP_04525133.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974] gi|237821332|ref|ZP_04597177.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974M2] gi|147759458|gb|EDK66450.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V G+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVTGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLNQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|237654279|ref|YP_002890593.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] gi|237625526|gb|ACR02216.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] Length = 272 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +++ + + LR P A G ++ V RRAKYL Sbjct: 1 MPELPEVETTCRGIRPHVQGRSLSRLVVRNPRLRVAVPADLPAHIEGARLEAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++IVHLGMSGS + + H+HV + DPR Sbjct: 61 LLRFPA-GTVIVHLGMSGSLRVVAAAEP----AGAHDHVDFVFGE------CALRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L LGPEP + F+A +L + +K+ L++ + + G+ Sbjct: 110 RFGMVVWQP-GDVAAHPLLAGLGPEPLGDGFDADWLLRITRGLRAPIKHVLMDSRKLVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ L +L+ +++ L AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLEPAGRLGPRR------CARLVDCVRETLAAAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ GE C CG +RRIV A R++F+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFVYGRDGESC-RVCGTPVRRIVSAQRASFFCPRCQR 270 >gi|254498621|ref|ZP_05111340.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] gi|254352161|gb|EET10977.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] Length = 271 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 167/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ T+ +I + NLR P++ GKKII V+RRAKY+ Sbjct: 1 MPELPEVETTKQGIKSHLEGQTIHEINVRNFNLRIPVPNNIDELCAGKKIIAVTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L +I+HLGMSG I + +H+H+T++LTN K + ++DPR Sbjct: 61 LIQL-SRGYLIIHLGMSGHLRIISGATI----PEKHDHITLNLTN-----KQALHFSDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V+ +Q+ L LGPEP F+ YL + KN +K+ +++ +IV G+ Sbjct: 111 RFGLFTYVD-ENPHQHQLLSHLGPEPLSEDFDGSYLYQRAKNKNKPIKSFIMDNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A+L P + T+++ + + L++ I+ VL AI++GG++LRD+ Sbjct: 170 GNIYATESLFLAQLHPNKPTKNVSEEQ------CHLLVKHIKAVLQQAIESGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ +PCL C ++I +V GRS+ +C CQ Sbjct: 224 AFDGKPGYFSILLQVYGRKNQPCLH-CQRLIETLVIGGRSSAFCPNCQ 270 >gi|284008829|emb|CBA75606.1| formamidopyrimidine-DNA glycosylase [Arsenophonus nasoniae] Length = 269 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNKIQYSIVRNSQLRWPVATEIL-HIANESVLSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L + II+HLGMSGS I AK +H+H+ + L + + Y DPR Sbjct: 60 LIQL-QHGWIIIHLGMSGSIRI----LAKEQLAEKHDHIDLVLADGKT-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T+ P L LGPEP FNA YL + K + +K L++ KIV G+ Sbjct: 110 RFGAWLW--TNDLDNCPVLFHLGPEPLSTDFNADYLYQRAKNKKTAIKPWLMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK+ P R SL + + L+ +I+++L +I GG +L+D++ Sbjct: 168 GNIYANEALFAAKILPTRAAHSLTRKE------IDNLVIQIKQILQCSIKQGGITLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CGQ+I I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQQLFVYGKKGEACSH-CGQLIESIKLGQRSTFFCYNCQK 269 >gi|148992895|ref|ZP_01822514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|168490211|ref|ZP_02714410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|147928347|gb|EDK79363.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|183571439|gb|EDT91967.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|332073303|gb|EGI83782.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17570] Length = 274 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLNQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|15672335|ref|NP_266509.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] gi|13878494|sp|Q9CIK4|FPG_LACLA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12723222|gb|AAK04451.1|AE006272_5 formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] Length = 272 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 143/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ +IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDEQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L ++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTES------SIHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|307127479|ref|YP_003879510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] gi|306484541|gb|ADM91410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] Length = 274 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|152994665|ref|YP_001339500.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] gi|189044664|sp|A6VSY6|FPG_MARMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150835589|gb|ABR69565.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] Length = 272 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + ++ + + + LR+ S+ G++I +SRR KY+ Sbjct: 1 MPELPEVETTLRGIEPKLVGRSLARVDIRQPKLRWLITPELSSEMVGEEITHLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++IVHLGMSGS H+HV ++ + Y DPR Sbjct: 61 GIHT-SKGTLIVHLGMSGSLYFVPAETP----PLFHDHVDFCFADDD----VWLRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +++ ++ LGPEP + FNA L + + +K +++ K+V G+ Sbjct: 112 RFGAILW-TTEDWHEHELIKHLGPEPLSDMFNADMLYVRAKGRKVPIKTFIMDSKVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R ++ + L +L++ I+ VL AI GG++L+D+V Sbjct: 171 GNIYANEALFKAGIRPDRLAGNISKAR------LARLVECIKVVLAAAIKQGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VYG+ + C+ C + ++ I QA RST +C CQ Sbjct: 225 GGDGKPGYFKQELAVYGRANKACV-ICSKPLKEIRQAQRSTVFCINCQ 271 >gi|227530467|ref|ZP_03960516.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] gi|227349572|gb|EEJ39863.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] Length = 280 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 136/288 (47%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I +H + F + G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAGRKINGIDVHYGKTITNDVEQFRQSLIGQTIETVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + H HV T+ T + Y D R Sbjct: 61 LFRFSNHLTMVSHLRMEGSYYTQPVDAPIDK----HTHVVFKFTDGT-----ELCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP F Y + +K LLNQ+ +AG+ Sbjct: 112 KFGRMTLVKTGDEMTVGGLKTIGPEPTAADFKIDYFKRILQRSRGKIKPFLLNQRHIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +K++P + +L + L I + L AI+ G+++ + Sbjct: 172 GNIYVDEVLWMSKINPEQPANTLTDKQ------IQTLHDNIIQELSRAIEYKGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG G+ C CG + +I R T +C +CQ Sbjct: 226 NAFGDAGAFQEQLNAYGHGGDLC-PRCGTKMVKIKVNQRGTTFCPHCQ 272 >gi|168494399|ref|ZP_02718542.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] gi|183575665|gb|EDT96193.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] Length = 274 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|171464197|ref|YP_001798310.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692824|sp|B1XS61|FPG_POLNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171193735|gb|ACB44696.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 278 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V+ + + LR+ P + + G+ + + RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRKVSAVKIIDGRLRWPVPANLTKTLPGQTVNGIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +++HLGM+G+ + +S H+ VT+ K + +DPR Sbjct: 61 LLE-MDTGYLLIHLGMTGTLRVLPSSDPLKT----HDRVTLEF------GKLSLRLHDPR 109 Query: 121 RFGFMDLVETSL------KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +FG + S A L K++ +K LL Sbjct: 110 KFGAVLWHPKSKGPIKKFILLQKLGVEPFSSEFSGELGAEILYQTSRKRSVAVKQFLLAG 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V G+GNIY E+L+ A + P + L + +L + ++ +L AI+AGGS Sbjct: 170 QAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQ------CSRLAKAVRSILKKAIEAGGS 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SL+D+V+ DG G+F VY + G PC C I ++VQ R+T++C+ CQK Sbjct: 224 SLKDFVNSDGDPGHFMVQTKVYDRKGLPC-KVCKTPISQMVQGQRTTYFCSQCQK 277 >gi|329929158|ref|ZP_08282944.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328936835|gb|EGG33270.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 277 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + ++ + R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRI-LLDGLVLVSHLRMEGRYGVYRAEEP----VEKHTHVIFHFSDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSLKDAE------LKRLYHAIVDTLSEAVDAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC CG I +IV GR T YC CQ Sbjct: 225 YVNGQGEMGMFQNSHQIYGRKDKPC-HACGGPIHKIVVGGRGTHYCPKCQ 273 >gi|332186406|ref|ZP_08388151.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] gi|332013774|gb|EGI55834.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] Length = 271 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 120/289 (41%), Positives = 163/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ N + + R +LR FP G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLTPVLANERLMLVEPRRADLRHPFPADLRQRMTGARVTSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ + H+H+ + R+ NDPR Sbjct: 61 LIDTDRGDTMIFHLGMSGRWRIDP------GEPQTHDHLLLETEAGR-----RLALNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+DL T+ YPP +GPEP FNA YL + + + +K LL+Q+IVAG+ Sbjct: 110 RFGFVDLWSTADLASYPPFLAMGPEPLSEDFNAAYLMERLEGRAAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R + + L +L++ I+ VL AI AGGSSLRDYV Sbjct: 170 GNIYVCEALHMAGIAPGRAGGQISKAR------LTRLVEAIRAVLNAAILAGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG ++RR +GRSTFYC CQ+ Sbjct: 224 RPDGELGYFSKEWRVYGREGEACE--CGAIVRRRSDSGRSTFYCASCQR 270 >gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716] Length = 279 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + T + +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTGA----EVDKHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL + + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTDDQ------IKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|260581780|ref|ZP_05849577.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] gi|260095373|gb|EEW79264.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] Length = 271 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEELIT-LKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIEQRNSFFCPKCQK 269 >gi|221231733|ref|YP_002510885.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] gi|220674193|emb|CAR68721.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] Length = 274 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] Length = 275 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + +H + F+ A G+ I+DV RR K Sbjct: 1 MPELPEVETVRKTLKELVTGKEIGQVSIHWPKMIKQPGEAEQFADALAGQTILDVGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+I + +++ HL M G + + K H HV T+ + + Y D Sbjct: 61 FLIIYT-DDYALVSHLRMEGKYALYSKEEDKDK----HTHVIFHFTDGS-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LGPEP F +L + N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGEEFASLPLSQLGPEPFSEEFTPQFLQQRLAGTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R SL + + +L +EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERLASSLSDDE------IGRLHKEIVATLSEAVEKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C + CG + RI+ GR T +C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEACKT-CGSTLERIIVGGRGTVFCPVCQ 273 >gi|225870911|ref|YP_002746858.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] gi|225700315|emb|CAW94602.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] Length = 297 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTIPGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ + + H HV +++T+ + ++Y D R Sbjct: 85 LFD-FGQLVMISHLRMEGKYLLFPDTVPEHK----HFHVFLTMTDGST-----LVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + R LGPEP +F +K LL+Q +VAG+ Sbjct: 135 KFGTFDLLPKAELAAFFQKRQLGPEPTKQTFQLKTFEAALLASKKTIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAARVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQK Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGTSIVKLKVGGRGTHVCPRCQK 296 >gi|22537632|ref|NP_688483.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|25011596|ref|NP_735991.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae NEM316] gi|76788529|ref|YP_330125.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77405216|ref|ZP_00782314.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] gi|77408547|ref|ZP_00785283.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77411672|ref|ZP_00788011.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77414744|ref|ZP_00790872.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|54037119|sp|P64153|FPG_STRA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040773|sp|P64152|FPG_STRA3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101319|sp|Q3K028|FPG_STRA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22534518|gb|AAN00356.1|AE014260_12 formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|24413135|emb|CAD47213.1| Unknown [Streptococcus agalactiae NEM316] gi|76563586|gb|ABA46170.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77159211|gb|EAO70394.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|77162244|gb|EAO73216.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77172821|gb|EAO75954.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77176218|gb|EAO78989.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] Length = 273 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 144/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + + F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + + HL M G +++ H H+ LTN + ++Y D R Sbjct: 61 LFDFGEMVMV-SHLRMEGKYLLFPNKVPDNK----HFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L ++ + L +EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKIHPQRLANQLTESETS------LLHKEIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|168483039|ref|ZP_02707991.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|172043411|gb|EDT51457.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|332201436|gb|EGJ15506.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47368] Length = 274 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + + H H + ++Y D R Sbjct: 61 LF-CLTDKVLISHLRMEGKYFYYPDQVPERK----HAHFFFRFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQIFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|88813702|ref|ZP_01128929.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] gi|88789056|gb|EAR20196.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] Length = 272 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + I + LR+ + ++II + RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHVRGRRIAKIIIRDARLRWPIAENLPRQAEDRRIIGIQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LE + ++I+HLGMSGS + A H H+ I L + + Y DPR Sbjct: 61 LFRLEADATLILHLGMSGSLRLV----AAQDPPLAHAHLDIILASGQ-----ALRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + Q+ L +LGPEP ++F+A YL + K L++ + V GI Sbjct: 112 RFGSLHWCT-GDPAQHHLLASLGPEPLSSAFHADYLYGLSRGRRICAKALLMDSRAVVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P+R ++ +L+Q ++ VL +AI+AGG++LRD+ Sbjct: 171 GNIYANEALYRAAIRPMRSAG------CIGRNRYARLVQAVKSVLAEAIEAGGTTLRDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYF VYG+ G C C +IR R+T+YC CQ Sbjct: 225 DSTGQPGYFHRRLEVYGRGGAACQ-RCAGIIRMERLGQRATYYCPGCQ 271 >gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + TS + +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTSA----EVDKHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL + + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTDDQ------IKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|311108753|ref|YP_003981606.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] gi|310763442|gb|ADP18891.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] Length = 275 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 146/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+T + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLTRLVIHESRMRWPIPPDLPATIAGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS H+HV + +DPR Sbjct: 61 LLR-FEHGTQIVHLGMSGSLRSVAPGEFLRK----HDHVEWIFEE------AVLRLHDPR 109 Query: 121 RFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + S +P L LG EP D F+ +L F ++ +K LL V Sbjct: 110 RFGAVLWHPASDGPVDVHPLLAKLGIEPFDPRFDGAWLHRHFKNHSAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRARINPKTPANKLSPAR------CERLADMVRATLADALTSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC C IRRIVQ R+T+YC CQ+ Sbjct: 224 YVGATGEPGAYFEIHAAVYEREGQPC-RVCSTPIRRIVQGQRATYYCPKCQR 274 >gi|319745430|gb|EFV97736.1| DNA-formamidopyrimidine glycosylase [Streptococcus agalactiae ATCC 13813] Length = 273 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 146/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + ++F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNNFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + + HL M G +++ H H+ LTN + ++Y D R Sbjct: 61 LFDFGEMVMV-SHLRMEGKYLLFPNKVPDNK----HFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R L ++ + L +EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEALWAAKIHPQRLANQLTESETS------LLHKEIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|83595128|ref|YP_428880.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] gi|123525348|sp|Q2RMQ2|FPG_RHORT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83578042|gb|ABC24593.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] Length = 281 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 113/295 (38%), Positives = 159/295 (53%), Gaps = 20/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + ++ + R LR P GK + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPALVGERLSRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++HLGMSGS + A + H+H+ RV + DPR Sbjct: 61 LLRMIDGPVALIHLGMSGSMTVGP--LAGHAEPGPHDHILFETEAG-----LRVTFRDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E +P L LGPEP +F+A L + + + + +K ALL+Q +VAG+ Sbjct: 114 RFGLITLAEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLDQGVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA +SP+R S+ L+ I+ VL +AI AGGSSLRD+ Sbjct: 174 GNIYVSEALFRAGISPLRPAASVTGA------WAEALVAAIRAVLGEAIAAGGSSLRDHR 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG------QMIRRIVQAGRSTFYCTYCQK 289 DG++GYFQ+ F+VY + G+PC C I R+VQ+GRSTF+C Q+ Sbjct: 228 QTDGALGYFQHRFAVYDRVGQPC-PGCDCDVARTGGIERMVQSGRSTFFCGRRQR 281 >gi|118594532|ref|ZP_01551879.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] gi|118440310|gb|EAV46937.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] Length = 271 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + L ++K TV I + +LR+ P + S G++I+++ RRAKY+ Sbjct: 1 MPELPEVEVTCQGLKPLLK-KTVHKIVIRNYSLRWPIPTNLSTVVEGQEILEIKRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ N ++I+HLGMSG I K +H+HV N + + YNDPR Sbjct: 60 LVR-FSNGTLILHLGMSGHLYIIPEGA----KPKKHDHVDFIFGNES----VILRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T ++ L+ LGPEP ++ FNA YL + K+ +K+A+++ V G+ Sbjct: 111 RFGSILW-TTDNPLEHRLLKNLGPEPLEDGFNAEYLGIRLRAKSQCIKSAIMDGHNVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P RK+ L + L L+ I+ V+ AI GGS++ D+ Sbjct: 170 GNIYASEALFYAGIKPQRKSSKLTKKE------LKALVTSIKDVINKAIVKGGSTMNDFF 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G GYFQN VYG+ G+ C C ++ +I RS+F+C CQK Sbjct: 224 DVNGENGYFQNEHKVYGRKGKDCY-QCDSLVLQITIGQRSSFFCNQCQK 271 >gi|260774463|ref|ZP_05883377.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] gi|260610590|gb|EEX35795.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] Length = 269 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ I + LR+ PH + G++I +SRRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQTIATITWRCEKLRWPIPHELT-HLEGQQITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE E + I+HLGMSG+ + +H+HV + L N + Y+DPR Sbjct: 60 FIETEA-GNAIIHLGMSGALRVLDADFP----AGKHDHVDLVLANGK-----LLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L +GPEP ++FNA + + + K +K +++ K V G+ Sbjct: 110 RFGAWLYIAPGE--SHPLLEHMGPEPLTDAFNAETIAKRANNKRLAIKAFIMDNKNVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++AK+ P+R +SL L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFKAKIHPLRPAQSLSDTEWQC------LVSEIKAVLATAIAQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC C + I A R++ +C +CQ Sbjct: 222 QADGKPGYFAQELQVYGKGGKPC-PICAEPILEQKIAQRNSMFCNHCQ 268 >gi|300313204|ref|YP_003777296.1| formamidopyrimidine-DNA glycosylase [Herbaspirillum seropedicae SmR1] gi|300075989|gb|ADJ65388.1| formamidopyrimidine-DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 150/291 (51%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ TV+ + + LR+ FP A RG+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++IVHLGMSG I A +H+H + + DPR Sbjct: 61 LIH-FDHGTLIVHLGMSGHLRILPPGIA----PQKHDH------FDLEVGGQVMRMTDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++ LR+LG EP + F A L Q +++ +K LL IV Sbjct: 110 RFGAILWHDLADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A++ P + +L Q I++ L AI+ GGSSLRD Sbjct: 170 GVGNIYASESLFKARIHPKTAAGKISLPR------YERLAQAIRETLAAAIEQGGSSLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + VY +TGE C C IR+I Q RSTFYC CQK Sbjct: 224 FIAVNGQSGYFQQNYFVYNRTGEAC-RICATPIRQIKQGQRSTFYCVSCQK 273 >gi|226199567|ref|ZP_03795124.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] gi|254296087|ref|ZP_04963544.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|157806100|gb|EDO83270.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|225928448|gb|EEH24478.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] Length = 273 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 17/288 (5%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + P +H+HV + + + DPRRFG Sbjct: 61 VDA-GWFIVHLGMTGTLRVLPNDAPPPA-PAKHDHVDWIFDE------FVLRFRDPRRFG 112 Query: 124 F--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 + + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 113 AVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVVGVG 172 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E+L+RA + P + +L ++ L DAI+ GGS+LRD+V Sbjct: 173 NIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRDFVG 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 SNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 273 >gi|119713349|gb|ABL97413.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB80_02D08] Length = 270 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 163/288 (56%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +++ + ++ ++ +NLR+ F + T G+ + + RRAKYL Sbjct: 1 MPELPEVETTLRAIEKF-QSLKIHEVKIYNRNLRWKISKDFESLTIGQTVESIKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +II+HLGMSGS I + IK H+HV + + R+IYNDPR Sbjct: 60 IFHLSNGQNIILHLGMSGSLRIAKNNENFFIK---HDHVELIFDDE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + TS ++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHV--TSNYKKHKLIKNLGPEPLSKNFNAESFYAACKTSKTNIKSFLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP+R + L N KL+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLSSISPLRDAKDLDLNE------CKKLVASGKKILKKAINVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ E C + C I +IV R+TF+C CQ Sbjct: 223 SADGSPGYFKFELNVYGRENESCNNCCEN-ISKIVINQRATFFCKSCQ 269 >gi|90101305|sp|Q65R59|FPG_MANSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ A +KI +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQL-AQISQQKITALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I H+H+ I + N + YNDPR Sbjct: 60 IIHT-EQGYIIGHLGMSGSVRIVSARDPVDK----HDHLDIVMNNGKI-----MRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 110 RFG--TWLWSANLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L + L+++I++ L AI+ GG++L+D++ Sbjct: 168 GNIYANETLFMCGLHPEKITAKLTKAQ------CALLVEKIKQELKRAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 222 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 269 >gi|146284319|ref|YP_001174472.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] gi|166198735|sp|A4VRM9|FPG_PSEU5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145572524|gb|ABP81630.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] Length = 270 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LIRAES-GTLIVHLGMSGSLRLVDAASP----AAKHEHVDILLESGQ-----ALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SDEPLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRARYL------KLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C S CG +R I R++ YC+ CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFCKS-CGSTLREIRLGQRASVYCSRCQR 270 >gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262] gi|21362544|sp|Q92BF1|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262] Length = 273 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVTKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVHPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-ICGTPIEKIKLNGRGTHFCPHCQK 273 >gi|253577307|ref|ZP_04854625.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843311|gb|EES71341.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 285 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R D F A G I+++ RR K Sbjct: 1 MPELPEVETVRRTLTQLIVGKTIQSVHVFLPRIIQRPDDIRRFEAELAGHTILEIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + L ++ HL M G + + + +H HV T+ T + Y D Sbjct: 61 FLRI-IMDGLVLVSHLRMEGRYGLYQPG----EEVEKHTHVIFRFTDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LG EP + SF + ++ + +K ALLNQ+ + Sbjct: 111 VRQFGTMHLFAPGEEFTNKPLVKLGLEPLEESFTLQAFQDKISRRTTKIKPALLNQEYIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P L K L +L I + L +A++AGGSS++ Sbjct: 171 GLGNIYVDEALFRAGIHPEYPADKLT------KRQLEQLHAAIVETLTEAVEAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ GEPCL NCGQ + + V GR T +C CQ Sbjct: 225 YVNGQGEMGMFQHSLRMYGRQGEPCL-NCGQPVMKTVVGGRGTHFCPNCQ 273 >gi|322387709|ref|ZP_08061318.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] gi|321141576|gb|EFX37072.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] Length = 288 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + F G+ I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKTDLDEFQKEMPGQVIQTMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV I + ++Y D R Sbjct: 75 LFYL-SDKVLISHLRMEGKYFYYPDQVPERK----HAHVLIHFEDG-----GTLVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 125 KFGTMELLAPELLEAYFISKKLGPEPTEKDFDLGSFKLALKKSKKTIKSHLLDQTLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL K+ E VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLWRAKVHPSRTSNSLTAQE------ARKVHDETINVLGQAVEKGGSTIRTYT 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S C +I +I GR T +C CQ+ Sbjct: 239 NAFGEDGTMQEFHQVYDKAGQAC-SRCETIIEKIQLGGRGTHFCPKCQR 286 >gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378] Length = 273 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVTKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R +L + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVHPERAANTLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-ICGTPIEKIKLNGRGTHFCPHCQK 273 >gi|315633560|ref|ZP_07888850.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] gi|315477602|gb|EFU68344.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] Length = 274 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ T+ I + + LR+ A KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYTIEKIEVRQPKLRWAVSPEL-ATLHQVKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I C H+H+ I L N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGTVRIVPHDCPIDK----HDHLDIVLNNGR-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEKLDEFHLFL--KLGPEPLSEEFNADYLFKKSRKKTTALKTLLMDNTVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 168 GNIYANESLFLCGLHPMKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I + R++FYC CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLTIGQRNSFYCPMCQK 269 >gi|301154721|emb|CBW14184.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus parainfluenzae T3T1] Length = 271 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + I+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTT-LKNVNILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPHDSP----IDKHDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E+ ++ LGPEP + FNA YL + KK++ LK L++ IV G+ Sbjct: 110 RFGAWLWTESLDEFHLFL--KLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPMKLAENLTRKQ------CALLVETIKDVLAKAITQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC C I +V R++FYC +CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PKCSTKIESMVIGQRNSFYCPHCQK 269 >gi|315640781|ref|ZP_07895883.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] gi|315483536|gb|EFU74030.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] Length = 276 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAA-TRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + ++ + A G+ + + RR K+ Sbjct: 1 MPELPEVETVRRGLEQLVIGKTIQSVSVYWDRMIEGGDKEKVAFELVGQTVEAIQRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ N +I HL M G + +H HV T+ + + Y D Sbjct: 61 LIFRYTAND-LISHLRMEGKYEFFPQETP----PSKHTHVIFHFTDGS-----ELHYQDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG LV +Y + LGPEP ++ F K +K LL QK+V G Sbjct: 111 RKFGRFALVAKGKSAEYAGIAKLGPEPTNDQFLLGAFQQGLAKSKKAVKPLLLEQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P R +L + L Q I VL A+ AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPERLACTLTTDESI------ALHQAIIDVLGKAVIAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ A YG+ G+PC S CG +I + A R T +C CQK Sbjct: 225 HNALGEAGTFQVALHAYGQQGKPC-SRCGTLIVKTKVAQRGTHFCPNCQK 273 >gi|322391813|ref|ZP_08065278.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] gi|321145293|gb|EFX40689.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] Length = 274 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKIDLYEFKRELPGQVIQSMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + +I HL M G + + H H+ I T+ ++Y D R Sbjct: 61 IFYL-SDKVLISHLRMEGKYFYYPDQVPERK----HAHLFIQFTDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPELLETYFLSKKLGPEPTEQDFDLPTFQKALQKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL K+ E KVL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAKIHPSRLSNSLTAQE------ARKVHDETIKVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S CG MI +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQEFHQVYDKAGQEC-SRCGAMIEKIQLGGRGTHFCPTCQR 272 >gi|322376465|ref|ZP_08050958.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] gi|321282272|gb|EFX59279.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] Length = 274 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRCGLEKLILGKKISSIEIRYHKMIKTDLDEFQKEVPGQVVELMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV I + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQAPERK----HAHVLIHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + +GPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLSPDLLDAYFISKKIGPEPIEQDFDVQVFQAALTKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A+D GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTVAEAI------AIHDQTIAVLSQAVDKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTVIEKIQLGGRGTHFCPQCQR 272 >gi|270157974|ref|ZP_06186631.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|289163759|ref|YP_003453897.1| formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] gi|269989999|gb|EEZ96253.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|288856932|emb|CBJ10746.1| putative formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] Length = 274 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + ++ T++ IC+H LR P + GKKI+ ++RRAKY+ Sbjct: 1 MPELPEVETTKEGIKLHLEGQTISRICVHNPRLRIPVPDRINELCAGKKILAITRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L +++HLGMSG + S +H+H+T++L NN + + DPR Sbjct: 61 LIQL-SQGHLLIHLGMSGHLRMVELSSI----PQKHDHITVALNNN-----LLLRFYDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ Y++P L LG EP FN YL + KN +K+ +++ KIV G+ Sbjct: 111 RFGLFLYID-KNPYKHPLLAHLGKEPLSEEFNGHYLFQKGKNKNKPIKSFIMDNKIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P T+ L + KL + I++VL AI GG++L+D+ Sbjct: 170 GNIYATESLFLAKIHPSTPTKILSEETQL------KLAKHIKEVLQQAIACGGTTLKDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + VYG+ +PC+ C I ++ GR++ +C CQK Sbjct: 224 SFDGKPGYFSISLKVYGRKNQPCM-QCQHPIASVILGGRNSTFCPKCQK 271 >gi|289209161|ref|YP_003461227.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] gi|288944792|gb|ADC72491.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ T+ + + LR+ P G +I ++RRAKYL Sbjct: 1 MPELPEVETTRRGLSPLLEGQTIEWLEVRNGRLRWPVPEELPGRLAGARITTLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++HLGMSGS H+H+ + LTN +V ++DPR Sbjct: 61 LL-NTDRGGALLHLGMSGSLRHCMPGVPLRT----HDHLILHLTNGA-----QVRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP D +FN +L + + +K +++Q +V G+ Sbjct: 111 RFGCCLPLPETGEP-HPLLAALGPEPLDATFNGDHLFRRSRGRRGPIKAFIMDQDVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L I+ VL AI+ GG++LRD++ Sbjct: 170 GNIYATEALFLAGIRPGRAAGRVTRAE------YERLAGFIRTVLGAAIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ + VYG+ GEPCL C +R R++ YC CQ+ Sbjct: 224 REDGTHGYFRQSLRVYGRAGEPCLE-CATPLRNRRIGQRASAYCPTCQR 271 >gi|24376198|ref|NP_720242.1| formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] gi|29611714|sp|Q8E8D9|FPG_SHEON RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24351249|gb|AAN57685.1|AE015904_8 formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAASLAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCSICQ 269 >gi|257869279|ref|ZP_05648932.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] gi|257803443|gb|EEV32265.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] Length = 280 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ N T+ ++ + + F+A +G++ RR K+ Sbjct: 1 MPELPEVETVRRGLEKLILNKTIKEMEIRWPRIIESPEVPIFAAMLKGQQFQAFDRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + +I HL M G + +H HV T+ + + Y D Sbjct: 61 LIF-KLTDYDLISHLRMEGKYEFFEKEGV----PDKHTHVIFQFTDGS-----ELHYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LVE Y + LGPEP F T K +K LL+QK+V G Sbjct: 111 RKFGRMTLVEKDQSSTYKGIMQLGPEPLPELFLLTDFTRDLKKSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + + L + I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQSAATLNEAE------INLLHRAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G+FQ + VYG+TG PC+ CG I + A R T YC +CQ+ Sbjct: 225 LNALGEAGHFQVSLHVYGQTGNPCV-RCGTPIVKTKVAQRGTHYCPFCQQ 273 >gi|91775039|ref|YP_544795.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] gi|123254763|sp|Q1H3I3|FPG_METFK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91709026|gb|ABE48954.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] Length = 279 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L ++ TVT + + +R+ P H G +++++ RR KY+ Sbjct: 1 MPELPEVEVTRRGLEPLI-GATVTQAVIRQPAMRWPIPSHLPQVLHGARLLELRRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E +I+HLGMSG + + +H+H + + + DPR Sbjct: 60 IARFES-GCLILHLGMSGRLCLLESDTF----PEKHDHFDLHFADGR-----VMRMRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ L+ LG EP D +FN +L ++S +K +++ +V G+ Sbjct: 110 RFGAVLW-AGDQPDEHSLLKVLGQEPLDEAFNGEFLQQAIRTRSSPIKTVIMDSHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R+L +L++E++ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRAGIHPETPARALTLAQ------CRRLVEEVKLTLQDALQAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VYG+TG+PC C I + RSTFYC CQ+ Sbjct: 223 GADGNPGYFQQTYFVYGRTGQPC-RVCQTPIAVLRLGQRSTFYCPACQQ 270 >gi|328676674|gb|AEB27544.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida Fx1] Length = 274 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|300113180|ref|YP_003759755.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] gi|299539117|gb|ADJ27434.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLFLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II HLGMSGS + + +H+H+ I L + + +NDPR Sbjct: 61 LL-NCTQGTIIFHLGMSGSLRLVTNNTP----PAKHDHLDILLNSGRC-----LRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++ F+ YL + + +K ++N +IV GI Sbjct: 111 RFGSVSW-TQANPVHHPLLEILGPEPLESLFDGHYLFKHSRHRRAPVKVFIMNHRIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L I+ VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHPRRSAGRIGLAR------YQRLADTIKTVLDNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +Y + PC CG IR R+++YC CQ Sbjct: 224 TSDGKPGYFVHQLQIYNRNAHPC-PVCGTPIRLERIGQRASYYCPRCQ 270 >gi|329113491|ref|ZP_08242272.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] gi|326697316|gb|EGE48976.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] Length = 279 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 123/293 (41%), Positives = 172/293 (58%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIEGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ + H H+ + L N R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLDSPTTPL-----LHEHIVLILQNGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLAGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P +L KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAPTMPACNLTT------PKARKLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC + G +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|254374026|ref|ZP_04989508.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] gi|151571746|gb|EDN37400.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] Length = 274 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|83590674|ref|YP_430683.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] gi|123524146|sp|Q2RHE9|FPG_MOOTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83573588|gb|ABC20140.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] Length = 274 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L ++ + + ++ + P FS G+ I + RR KY Sbjct: 1 MPELPEVETIKRTLTPCLREQKIARVEVYHPGVIAAPDPETFSRLLAGRIITGLDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L G ++VHL M+G + + H HV SL + + + D Sbjct: 61 LLVHLSGEYCLVVHLRMTGRLVFTEGAAPLAP----HTHVVFSLAGGPS-----LRFVDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L + P LR LGPEP D +F+A+ L + +K LL+Q++VAG Sbjct: 112 RRFGRLYLAAKAEVETLPGLRDLGPEPLDPAFDALALAAILAGRRRPIKQVLLDQRLVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A + P R SL + +L +Q+VL I G+S+RDY Sbjct: 172 IGNIYADEMLFAAGIDPRRPAASLNHEE------VARLRGAMQRVLEQGIANRGTSIRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G Q VYG+TG PC CGQ + R+ GRST +C CQ Sbjct: 226 VDGSGRQGSNQEHLQVYGRTGRPC-PRCGQPLERVRLGGRSTHFCPRCQ 273 >gi|225856628|ref|YP_002738139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] gi|225725435|gb|ACO21287.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] Length = 274 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYHKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LF-CLTDKVLISHLRMEGKYFYYPDQVPERK----HAHVFFRFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|317405473|gb|EFV85782.1| DNA glycosylase [Achromobacter xylosoxidans C54] Length = 281 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 145/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ +T + +H +R+ P A G + + RR KYL Sbjct: 7 MPELPEVETTRRGIDAVITGRPLTRLVVHESRMRWPIPAELPALVGGHTVRECGRRGKYL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS H+HV + + +DPR Sbjct: 67 LLR-FDHGTQIVHLGMSGSLRSVAPGEFLRK----HDHVEWIFD------QAVLRLHDPR 115 Query: 121 RFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L LG EP D F+ +L H F + +K LL V Sbjct: 116 RFGAVLWHPDADGPVENHPLLAKLGIEPFDPRFDGAWLHHHFKNHGAAIKQVLLAGMAVV 175 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L + +L ++ L DA+ +GGS+LRD Sbjct: 176 GVGNIYASESLFRARINPKTPANKLSRAR------CDRLADMVRATLADALTSGGSTLRD 229 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC CG I+RIVQ R+T+YC CQK Sbjct: 230 YVGATGEPGAYFEIHAAVYERAGQPC-RVCGTPIKRIVQGQRATYYCPKCQK 280 >gi|258542328|ref|YP_003187761.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256633406|dbj|BAH99381.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256636465|dbj|BAI02434.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-03] gi|256639518|dbj|BAI05480.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-07] gi|256642574|dbj|BAI08529.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-22] gi|256645629|dbj|BAI11577.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-26] gi|256648682|dbj|BAI14623.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-32] gi|256651735|dbj|BAI17669.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654726|dbj|BAI20653.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-12] Length = 279 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 123/293 (41%), Positives = 173/293 (59%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS +G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIKGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ + H HV + L + R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLDSP-----TEPLPHEHVVLILQDGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLVGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P +L KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAPTMPACNLTPPKAC------KLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC + G +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|281490900|ref|YP_003352880.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] gi|281374658|gb|ADA64178.1| Formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] Length = 272 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ +IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDEQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW K+ P + L ++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLEKIHPEKMANQLTES------SIHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|119773259|ref|YP_925999.1| formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] gi|166198747|sp|A1S1S3|FPG_SHEAM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119765759|gb|ABL98329.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] Length = 271 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++ V + + NLR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVP-ELAQNIVGQTILGVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + K +H+H+ + + N + +NDPR Sbjct: 60 LIDTQA-GTTIVHLGMSGSLRV----LPKNTPVEKHDHIDLVMQNGR-----VLRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +F+A YL K +K L++ IV G+ Sbjct: 110 RFGAWLWSELP-EAAHPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDNAIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + L L E++ +L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKVDAER------LTLLTAEVKTILTQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C CG ++ I R+T +C+ CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTE-CGHLLSEIRLGQRTTVFCSLCQ 269 >gi|332687081|ref|YP_004456855.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] gi|332371090|dbj|BAK22046.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] Length = 274 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+KI + RR K+ Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLWSRIIEQPEVETFQKQLIGQKIKRIDRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L +I HL M G + H HV + ++++ ++ Y D Sbjct: 61 LIFKLTNWD-LISHLRMEGKYETHQKDDPITK----HTHVIFTFSDDS-----QLRYLDI 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L+ +Y + LGPEP +F+ K + +K LL QK+V G Sbjct: 111 RKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + + +L + I +L A+ AGG+++R Y Sbjct: 171 LGNIYVDEALWTAKIHPEKPANTLSVSE------VNRLHKAIIDILTQAVKAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+ +PC C I++I A R T +C +CQK Sbjct: 225 LNALGEAGTFQLALNVYGQKDKPCA-CCATPIQKIKVAQRGTHFCPHCQK 273 >gi|170717422|ref|YP_001783367.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] gi|189044662|sp|B0UUX0|FPG_HAES2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168825551|gb|ACA30922.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] Length = 270 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I H+H I + N + YND R Sbjct: 60 IIHT-EQGYIIGHLGMSGSVRIVPHDNPVNK----HDHFDIVMNNGK-----LLRYNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLW--TNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D++ Sbjct: 168 GNIYANEILFLCGLHPQKIAKTLTKKQT------EQLVFTIKQVLNEAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|113460292|ref|YP_718352.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 129PT] gi|123131889|sp|Q0I0X6|FPG_HAES1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|112822335|gb|ABI24424.1| DNA-(apurinic or apyrimidinic site) lyase [Haemophilus somnus 129PT] Length = 270 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I H+H I + N + YND R Sbjct: 60 IIHT-EQGYIIGHLGMSGSVRIVPHDNPVNK----HDHFDIVMNNGK-----LLRYNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLW--TNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D++ Sbjct: 168 GNIYANEILFLCGLHPQKIAKTLTKKQ------AEQLVFTIKQVLNEAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|237806907|ref|YP_002891347.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] gi|237499168|gb|ACQ91761.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] Length = 276 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M+ + V + + LR+ P G+ + + RRAKYL Sbjct: 1 MPELPEVEVSRLGITPWMEGIVVERVVIRHPRLRWPIPSEI-RLLEGQPLRQIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + I+HLGMSG I +H+HV + L N + ++DPR Sbjct: 60 LLRSTL-GTAILHLGMSGRLRILPIGTP----AEKHDHVDLELANGK-----LLRFHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + YQ+P L+TLGPEP ++F A YL + K S +K L++ ++V G+ Sbjct: 110 RFGALLW-TAEDPYQHPLLKTLGPEPLTDAFTADYLWQRSRKPRSAIKPWLMDNRVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL L+ ++KVL AI GG++LRD++ Sbjct: 169 GNIYANEALFMAHIHPKRAVNSLTPEES------QALVAAVKKVLARAITQGGTTLRDFM 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G+PC + C + + RS+ YC CQ Sbjct: 223 RTDGKPGYFVQELLVYGRAGQPC-TVCAHPLEELRLGQRSSVYCPICQ 269 >gi|313633102|gb|EFS00002.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067] gi|313637952|gb|EFS03260.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171] Length = 273 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMN----ETDEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLLFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGKTGEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKTGEPCV-ICGTQIEKIKLNGRGTHFCPNCQK 273 >gi|260892909|ref|YP_003239006.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] gi|260865050|gb|ACX52156.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] Length = 269 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L + + + + R + P GK I VSRR K+L Sbjct: 1 MPELPEVETIRRQLAEKVIGARIKRVEVRRAAV-MTNPIPGLDLLSGKTITGVSRRGKWL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LEG+L+++ HLGM+G + E + P H H+ I L R+ + D R Sbjct: 60 WLSLEGDLALLFHLGMTGQLVWEEEG-----ELPPHTHLLIELDRG------RLRFTDFR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ Y LGPEP +F+ YL + + +K LL QK VAG+ Sbjct: 109 RFGRVRLGKSEEIRDY-LEEKLGPEPLSPAFSVSYLKNALARSRRPIKALLLEQKAVAGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L ++ + +L + I+ VL + I G+S+R+YV Sbjct: 168 GNIYTDEALFLAGIDPRRPACTLTEDE------VKRLHEAIKGVLAEGIRHRGTSIRNYV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G VYG+ G+PC CG I++I +GR T +C +CQ Sbjct: 222 DAEGTPGEHSLFLRVYGREGQPC-PRCGTPIKKIKLSGRGTHFCPHCQ 268 >gi|167622081|ref|YP_001672375.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] gi|189044677|sp|B0TN04|FPG_SHEHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167352103|gb|ABZ74716.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] Length = 271 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VTD+ + +LR+ P + G+ I +V RR KYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNQVTDLIVRNPSLRWPVP-EIAKQIIGQTIRNVRRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I S +H+H+ + L + + +NDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRILPASTP----VEKHDHIDLVLASGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FNA YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLAALANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVDAER------IEILVSEVKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQK Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGHLLSEIKLGQRATVFCSLCQK 270 >gi|119470584|ref|ZP_01613287.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] gi|119446285|gb|EAW27562.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] Length = 269 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +KN VT + ++ ++R+ P G + ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHIKNQVVTKVNIYNASMRWPVPDDVYQ-LEGLTVTNIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ S I+HLGMSG+ + S H+HV N+ + NDPR Sbjct: 60 LLH-CELGSTILHLGMSGNLRVVDKSEPLKK----HDHVEFVFANDK-----ALRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L LGPEP ++F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEV--HKLLSKLGPEPLTDNFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PCL+ C + I RST +C++CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCLT-CDNELEEIRLGQRSTVFCSHCQK 269 >gi|327482703|gb|AEA86013.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPYLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LIRAES-GTLIVHLGMSGSLRLVDAASP----AAKHEHVDILLESGQ-----ALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SDEPLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRARYL------KLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C NCG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFC-RNCGGTLREIRLGQRASVYCGRCQR 270 >gi|1169728|sp|P42371|FPG_LACLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|433584|emb|CAA52351.1| formamidopyrimidine-DNA-glycosylase [Lactococcus lactis] Length = 273 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 140/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + H+H+T+ + +IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPREK----HDHLTMKFADGQ------LIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTL-GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG +L+ T Y + + D F+ + K +K LL Q +VAG Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYDEDFDEKLFREKLRKSTKKIKPYLLEQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P ++T LI++ ++ L I ++L AI GGSS+R Y Sbjct: 171 LGNIYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 -SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 272 >gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023] Length = 273 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENDEVTKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E ++AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFKAKVRPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I ++ GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-VCGTPIEKMKLNGRGTHFCPHCQK 273 >gi|167856318|ref|ZP_02479048.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219871061|ref|YP_002475436.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] gi|254789440|sp|B8F586|FPG_HAEPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167852548|gb|EDS23832.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219691265|gb|ACL32488.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] Length = 274 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + +I + + LR+ S +G II++ RRAKYL Sbjct: 1 MPELPEVETSMRGISPYLVGQKIKEIIVRQPKLRWAVSSELST-MQGATIIEIYRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+VHLGMSGS I K I H + + YNDPR Sbjct: 60 IIQTDK-GDILVHLGMSGSLGILSVKENKAIDKHDHIDLI-------TENGVILRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + + L LGPEP +F + YL + K +KN ++N IV G+ Sbjct: 112 KFGTWLWAEQAETAE--LLANLGPEPLSEAFTSGYLFEKSRNKTVAVKNFIMNNAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L +L+ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTAKQ------CERLVTVIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG +I V R++FYC CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEEC-NDCGSIIEAKVIGQRNSFYCPKCQR 271 >gi|254372567|ref|ZP_04988056.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida GA99-3549] gi|151570294|gb|EDN35948.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3549] Length = 274 Score = 199 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 159/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|221135337|ref|ZP_03561640.1| Formamidopyrimidine-DNA glycosylase [Glaciecola sp. HTCC2999] Length = 270 Score = 199 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + T+ I + LR+ P + G I V+RRAKYL Sbjct: 1 MPELPEVEVSRQGIEPGLVGQTIESIQIRTPKLRWPVPTEILST-HGHVIRSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I S+I+HLGM+G + + H+H+ I+LTN + +ND R Sbjct: 60 FI-NTDVGSVILHLGMTGYLRVFSQNTPLKK----HDHLDINLTNGQC-----LRFNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + + + LGPEP + F +L + + +K +++ K V G+ Sbjct: 110 KFGACLW-QGVDDEPHVLISALGPEPLTDDFTIDHLYTRAQGRTCTVKQFIMDNKHVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK++P R + + L I++VL AI GG++L+D+ Sbjct: 169 GNIYANEALFLAKIAPKRAAGKVSKAR------YATLTGYIKEVLAAAIAQGGTTLKDFS 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF+ +VYG++GEPC C I+ + R+TF+C CQ+ Sbjct: 223 QVDGNPGYFRLHLNVYGRSGEPC-RRCHTPIKSQMIGQRNTFWCPSCQR 270 >gi|144898444|emb|CAM75308.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum gryphiswaldense MSR-1] Length = 314 Score = 199 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 121/295 (41%), Positives = 164/295 (55%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R +LR P F+A G+++ V RRAKYL Sbjct: 37 MPELPEVETVARGLAAVWPGHRFIRVEARRPDLRKPLPADFAARLTGRRVESVGRRAKYL 96 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ L+++ HLGMSG+ +I S + H+HV + T V Y DPR Sbjct: 97 LVHLDDGLTLLGHLGMSGAMVI---SKGRNEPPGPHDHVEFVSDDGT-----MVTYRDPR 148 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T +P L LGPEP F+ L K +++K ALL+Q +VAG+ Sbjct: 149 RFGLMDL--TLDPSTHPLLAHLGPEPLGPDFHEKALAQTLDGKGASIKAALLDQNVVAGL 206 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E+L+ + + P R SL + KL+ I+ VL AI AGGSSL+D+V Sbjct: 207 GNIYVSESLFLSGIDPTRAAGSLKPRE------INKLVPAIRAVLERAIAAGGSSLKDHV 260 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG------QMIRRIVQAGRSTFYCTYCQK 289 +G +GYFQ++F+VY + GE C C I+RIVQ+GRSTFYC Q+ Sbjct: 261 QPNGELGYFQHSFTVYDRAGEAC-PGCDCDIARTGGIQRIVQSGRSTFYCAKKQR 314 >gi|219848489|ref|YP_002462922.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] gi|254789432|sp|B8G9X1|FPG_CHLAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219542748|gb|ACL24486.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] Length = 275 Score = 199 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L + + T+ L + P F+A G++I V RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLTPPPPEFAALVAGRRIEAVGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+ ++ +HL MSG ++ + A + H H + L + R+I++D Sbjct: 61 LLLTLDAGWTLAIHLRMSGHLLVAEPAAA----DAPHVHFALDLDDGR-----RLIFDDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++++ PEP + F L + + + +K LL+Q+++AG Sbjct: 112 RKFGRVHLLDSTGLLALDAAHG--PEPLTDDFTPAVLAERLRNRQAPIKALLLDQRLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A + P+ +L + +L+ AI GSSLR+Y Sbjct: 170 IGNIYANEALWLAGIHPLTPGGTLTVDQIAALHHAIRLVLAD------AIANQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q F+VY + G+PC C I RIV A RSTF+C CQ Sbjct: 224 RDGYGRRGNYQEHFNVYDRVGKPC-PRCQTAIERIVVAQRSTFFCPLCQ 271 >gi|328957054|ref|YP_004374440.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] gi|328673378|gb|AEB29424.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] Length = 278 Score = 199 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ + ++ + F G+KI++ RR K Sbjct: 1 MPELPEVETVRKGLEKLVSEATIESVDIYWDRIISGPIETTEFKRILMGEKIMEFDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++I + +++ HL M G + +E +S H HV L + + + Y D Sbjct: 61 YIIIRFKQW-ALVSHLRMEGKYEVEESSAPLKK----HTHVVFHLADGRD-----LRYLD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV ++ ++ LGPEP +F+ K +K LL+QKIVA Sbjct: 111 VRKFGRMTLVPIGEEFTATGIKLLGPEPTVETFDEAIFYKTLQTKKRAIKPLLLDQKIVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ AK+ P+R SL +N + L + I KVL DA++AGG+++R Sbjct: 171 GLGNIYVDEALFLAKMHPLRTANSLQKNE------VSLLHEAIIKVLGDAVEAGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G FQ SVYGK G PC+ CG I +I A R T +C CQ+ Sbjct: 225 YQNALGEAGSFQVKLSVYGKKGLPCI-RCGTPIEKIKVAQRGTHFCPNCQR 274 >gi|295399493|ref|ZP_06809475.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|312109949|ref|YP_003988265.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] gi|294978959|gb|EFG54555.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|311215050|gb|ADP73654.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] Length = 274 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ + TV D+ + + F +G+ I D+ RR K Sbjct: 1 MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + +I HL M G + + A H HV T+ T + Y D Sbjct: 61 FLKFIFDEH-VLISHLRMEGRYAVSKKKDAIEP----HTHVIFQFTDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP F A +L + K N +K ALL+Q +V Sbjct: 111 VRKFGTMHLYPKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV EAL+RA + P R SL L +E+ L +A++ GGS++R Sbjct: 171 GFGNIYVDEALFRAGIHPERAASSLTDEEAAC------LHREMVATLQEAVEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GEPC CG I++ V AGR T YC +CQ Sbjct: 225 YVNTQGEIGMFQLQLFVYGRKGEPC-KRCGNPIQKTVVAGRGTHYCAFCQ 273 >gi|229062270|ref|ZP_04199591.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] gi|228716998|gb|EEL68679.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] Length = 276 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKVIEDVIVTYPKIVKRPDDAEIFKDMLRGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ H HV + T + Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQEDEPIDK----HTHVRFLFKDGT-----ELHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFTQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|217964289|ref|YP_002349967.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|217333559|gb|ACK39353.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|307571145|emb|CAR84324.1| mutM [Listeria monocytogenes L99] Length = 273 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCI-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|34581344|ref|ZP_00142824.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] gi|28262729|gb|EAA26233.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] Length = 273 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKHSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDLLEKEFFND-LGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRDDE------IENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|299822774|ref|ZP_07054660.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] gi|299816303|gb|EFI83541.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] Length = 273 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T+ + +H + P F G++I V RR K+ Sbjct: 1 MPELPEVENVRTTLERQVIGKTIDQVIVHVPKMIHGLPADEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + +H H+ T+ T + + D Sbjct: 61 LLFDLTDC-TILSHLRMEGKFRV----YPETEPTTKHTHIIFHFTDQT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + L+ LGPEP F + K +K ALL+QK+VAG Sbjct: 111 RKFGTMQVAAKHQEETTNSLQKLGPEPLSAHFELAAFASKLKKTTRAVKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + A++ P+R L + L + +K++ A++AGGSS+R Y Sbjct: 171 VGNIYADEICFEAEVLPMRGGNELSDAE------VAALYEATKKIIGIAVEAGGSSIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +Q+ VYG+TGE CL CG + +I GR T +C CQK Sbjct: 225 ENSQGKKGNYQDFLKVYGRTGEKCL-RCGGTVEKIKLNGRGTHFCRGCQK 273 >gi|229916391|ref|YP_002885037.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] gi|259647145|sp|C4L470|FPG_EXISA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229467820|gb|ACQ69592.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] Length = 275 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 143/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + T+ + + +R P + G+ I DV RR K+ Sbjct: 1 MPELPEVETVCRRLRPAVSGKTIQSVDVLDPKIIRGLDPEEWVHHLIGETITDVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L N ++ HL M G F + +H HV I+ T+ + + YND Sbjct: 61 ILF-KLTNGYLVSHLRMEGKFF----PYETATEPVKHTHVVITFTDQST-----LHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVA 178 R+FG M+L + PPL L EP D L + K +K ALL+Q I Sbjct: 111 RKFGTMELRTNETIHTTPPLSLLAYEPFDERVTTEALHRRLERMKTRAIKTALLDQSIFV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P R SL + + ++ E VL +AI+ GGS++R Sbjct: 171 GLGNIYVDETLFRAGVHPTRPAASLSREE------VDRVRTEAVAVLNEAIERGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG+ G FQ VYG+TGEPC CG I ++ GR T YC +CQ+ Sbjct: 225 YADPDGATGTFQERLYVYGQTGEPC-RRCGHEIEKMKLGGRGTHYCPHCQQ 274 >gi|229587037|ref|YP_002845538.1| formamidopyrimidine-DNA glycosylase [Rickettsia africae ESF-5] gi|259647149|sp|C3PLF5|FPG_RICAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|228022087|gb|ACP53795.1| Formamidopyrimidine-DNA glycosidase [Rickettsia africae ESF-5] Length = 273 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLTTEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDLLEKEFFND-LGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRDDE------IENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|16803604|ref|NP_465089.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes EGD-e] gi|224501496|ref|ZP_03669803.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-561] gi|284801955|ref|YP_003413820.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284995097|ref|YP_003416865.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] gi|21362541|sp|Q8Y6W7|FPG_LISMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16410993|emb|CAC99642.1| mutM [Listeria monocytogenes EGD-e] gi|284057517|gb|ADB68458.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284060564|gb|ADB71503.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] Length = 273 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFKATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +QN VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQNKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|51247145|pdb|1PJI|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A 1,3 Propanediol Containing Dna gi|51247149|pdb|1PM5|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A Tetrahydrofuran Containing Dna gi|75765461|pdb|1XC8|A Chain A, Crystal Structure Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|218681752|pdb|3C58|A Chain A, Crystal Structure Of A Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A N7-Benzyl-Fapy-Dg Containing Dna Length = 271 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 142/288 (49%), Gaps = 18/288 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 1 PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLI 60 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 E+ + +I HL M G + + + H+H+T+ + +IY D R+ Sbjct: 61 FEIGDDFRLISHLRMEGKYRLATLDAPREK----HDHLTMKFADGQ------LIYADVRK 110 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+G Sbjct: 111 FGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLG 170 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E LW AK+ P ++T LI++ ++ L I ++L AI GGSS+R Y Sbjct: 171 NIYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY-S 223 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 ALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|47096729|ref|ZP_00234314.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|224499778|ref|ZP_03668127.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland 1988] gi|254828201|ref|ZP_05232888.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|254898269|ref|ZP_05258193.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161] gi|254912238|ref|ZP_05262250.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] gi|254936565|ref|ZP_05268262.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|47014913|gb|EAL05861.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|258600589|gb|EEW13914.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|258609160|gb|EEW21768.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|293590214|gb|EFF98548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] Length = 273 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|172058210|ref|YP_001814670.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] gi|229541071|sp|B1YKA0|FPG_EXIS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171990731|gb|ACB61653.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] Length = 276 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + T++ + + +R F A + ++I V RR K+ Sbjct: 1 MPELPEVETVRRSLERTVSGKTISSVKVFHPKMIRGMEVAPFVDALKQERIERVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL + ++ HL M G + + I+ +H HV T+ + + YND Sbjct: 61 LLFTFDRFY-LVSHLRMEGKYF----PYPQAIEKDKHTHVIFRFTDGS-----ELHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL-KNALLNQKIVA 178 R+FG M+L E PPL L EP D +F A L +K + K +LL+Q I Sbjct: 111 RKFGTMELREKETAMSVPPLAQLEREPFDPTFTAEVLAENLIRKKRSPIKTSLLDQSIFL 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+ A++ P+ K +L ++ + ++ VL A+++GGS++R Sbjct: 171 GLGNIYVDETLFAARVHPLTKAGALTLDD------ISRIHAAGVDVLAKAVESGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G FQ +VYG+TG PC CG I +I GR T +C CQ+ Sbjct: 225 YVSPTGK-GEFQLQLAVYGQTGAPC-PRCGTAIEKIKVGGRGTHFCPTCQQ 273 >gi|157828891|ref|YP_001495133.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933617|ref|YP_001650406.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rickettsia rickettsii str. Iowa] gi|166198743|sp|A8GTA0|FPG_RICRS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044670|sp|B0BUU0|FPG_RICRO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157801372|gb|ABV76625.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908704|gb|ABY73000.1| formamidopyrimidine-DNA glycosylase [Rickettsia rickettsii str. Iowa] Length = 273 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKEFFND-LGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRDDE------IENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|26991801|ref|NP_747226.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148550201|ref|YP_001270303.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida F1] gi|37999400|sp|Q88CQ5|FPG_PSEPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198734|sp|A5WAF9|FPG_PSEP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24986913|gb|AAN70690.1|AE016712_8 formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148514259|gb|ABQ81119.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas putida F1] gi|313501101|gb|ADR62467.1| MutM [Pseudomonas putida BIRD-1] Length = 270 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVELGLP----AAKHEHVDIELESG-----LMLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVYCPRCQR 270 >gi|312863118|ref|ZP_07723356.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] gi|311100654|gb|EFQ58859.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] Length = 273 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKVPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ H H+ L + + ++Y D R Sbjct: 61 IFD-FGQLIMISHLRMEGKYLLFTDQVPTNK----HFHLFFKLDDGS-----TLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L + + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLSKA------AMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|257465199|ref|ZP_05629570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] gi|257450859|gb|EEV24902.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] Length = 274 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTD-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I+VHLGMSGS I S +P+ H + + YNDPR Sbjct: 60 ILHT-EKGDILVHLGMSGSLGILKESDNQPVGKHDHVDLI-------TETGTILRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGAWLWAK--EALKHELLAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTEKQ------CERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG +I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEAC-NDCGSLIETKIIGQRNTYFCPHCQK 271 >gi|313124191|ref|YP_004034450.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280754|gb|ADQ61473.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 273 Score = 198 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSQINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|238650997|ref|YP_002916853.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] gi|259647150|sp|C4K2K4|FPG_RICPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238625095|gb|ACR47801.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] Length = 273 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGM+G F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMNGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKEFFND-LGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRDDE------IENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|52425999|ref|YP_089136.1| formamidopyrimidine-DNA glycosylase [Mannheimia succiniciproducens MBEL55E] gi|52308051|gb|AAU38551.1| Nei protein [Mannheimia succiniciproducens MBEL55E] Length = 292 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ + +KI +SRRAKYL Sbjct: 23 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQLAQ-ISQQKITALSRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I H+H+ I + N + YNDPR Sbjct: 82 IIHT-EQGYIIGHLGMSGSVRIVSARDPVDK----HDHLDIVMNNGKI-----MRYNDPR 131 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 132 RFG--TWLWSANLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 189 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L + L+++I++ L AI+ GG++L+D++ Sbjct: 190 GNIYANETLFMCGLHPEKITAKLTKAQ------CALLVEKIKQELKRAIEQGGTTLKDFL 243 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 244 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 291 >gi|266618598|pdb|3GPY|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 3 (Lrc3) gi|266618604|pdb|3GQ4|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 5 (Lrc5) Length = 273 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 19/288 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKYLL 61 LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+L Sbjct: 3 LPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLK 62 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 L ++I HL M G + + H HV T+ + + Y D R+ Sbjct: 63 F-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDVRK 112 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG G Sbjct: 113 FGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFG 172 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R YV+ Sbjct: 173 NIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRTYVN 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 227 TQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|239996975|ref|ZP_04717499.1| formamidopyrimidine-DNA glycosylase [Alteromonas macleodii ATCC 27126] Length = 269 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P A G+ +I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITQVVVRERRMRWPIPQE-VANVEGQSVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S H+HV I L + +NDPR Sbjct: 60 LIET-AKGTLILHLGMSGKLRVIDASTPIIK----HDHVDIVLNTGKC-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGAVLF--QAPDMQIAMLDNLGPEPLTDDFDDKRLFKLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAAGNISAARYQS------LTATIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC CG+ I V R+TF+CT+CQ+ Sbjct: 222 QTDGKPGYFAQHLNVYGRKGEPC-EVCGKAIESKVIGQRNTFFCTHCQR 269 >gi|300721240|ref|YP_003710510.1| formamidopyrimidine DNA glycosylase [Xenorhabdus nematophila ATCC 19061] gi|297627727|emb|CBJ88253.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus nematophila ATCC 19061] Length = 269 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNIIQYAEVRNSRLRWPVSEQIMK-LSDRPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LLEERPPEKHDHVDLIMADGKT-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + F+ YL K + +K L++ K+V G+ Sbjct: 110 RFGAWLW--SDDLNKCSVLSHLGPEPLFDQFDGEYLYSLSRNKKTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL Q + L I+++L +I+ GG++L+D++ Sbjct: 168 GNIYANEALFVAHILPERPVHSLTQQE------AHLLADIIKQILHRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C S CG+ I I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGELC-SKCGEKIECIKLGQRSTFFCRQCQ 268 >gi|167036164|ref|YP_001671395.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] gi|189044669|sp|B0KN79|FPG_PSEPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166862652|gb|ABZ01060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] Length = 270 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVELGLP----AAKHEHVDIELESG-----LMLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTALREVKLGQRASVYCPRCQR 270 >gi|325273726|ref|ZP_08139926.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] gi|324101146|gb|EGB98792.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] Length = 270 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVEQGLP----AAKHEHVDIELESG-----LMLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SQDPLRHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYASEALFAAGIDPRRAAGGISRARYL------KLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQTLFVYGRAGQPC-KVCGTELREVKLGQRASVFCPRCQR 270 >gi|262368041|pdb|3JR4|A Chain A, Mutm Interrogating An Extrahelical G gi|262368044|pdb|3JR5|A Chain A, Mutm Lesion Recognition Control Complex With N174c Crosslinking Site Length = 273 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 19/288 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKYLL 61 LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+L Sbjct: 3 LPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLK 62 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 L ++I HL M G + + H HV T+ + + Y D R+ Sbjct: 63 F-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDVRK 112 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VAG G Sbjct: 113 FGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFG 172 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 IYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R YV+ Sbjct: 173 CIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRTYVN 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 227 TQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|117620578|ref|YP_854697.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166215607|sp|A0KEN2|FPG_AERHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117561985|gb|ABK38933.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 270 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I VSRRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEIQE-LVDLTIHRVSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + I+HLGMSGS + +H+HV I L N + NDPR Sbjct: 60 LLET-DFGTAILHLGMSGSLRVLDIGTP----AEKHDHVDIELANGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++FNA YL + +++ +K L++ ++V G+ Sbjct: 110 RFGALLW-TREPAEAHALLAKLGPEPLTDAFNADYLRERAKGRSTAIKTFLMDNQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L L+ EI++VL +AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAAGNISAER------LGTLVAEIKRVLAEAIRQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC C ++ I R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQPCFH-CHTLLSEIRLGQRTTVFCSHCQR 270 >gi|254852187|ref|ZP_05241535.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|254931504|ref|ZP_05264863.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|255520154|ref|ZP_05387391.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-175] gi|300764770|ref|ZP_07074760.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|258605492|gb|EEW18100.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|293583056|gb|EFF95088.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|300514446|gb|EFK41503.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|328474917|gb|EGF45717.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 220] gi|332312006|gb|EGJ25101.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. Scott A] Length = 273 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|134299455|ref|YP_001112951.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] gi|172044279|sp|A4J4X3|FPG_DESRM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134052155|gb|ABO50126.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] Length = 277 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKI-IDVSRRAK 58 MPELPEVE I R+L + + +T + L + +R F+ G++ + RR K Sbjct: 1 MPELPEVETIVRSLEKHLSGLVITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ + L++++HL M+G I H HV L N ++ + D Sbjct: 61 YLLLHMSDGLTLVIHLRMTGRLIYCDADLPLEK----HTHVIFHLDNGK-----QLRFAD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG M LV T P ++ +GPEP D +F+ YL + ++ + +K+ LL+Q VA Sbjct: 112 VRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLDQCFVA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL AK+ P R L + L + I +V+ I G++ RD Sbjct: 172 GLGNIYADEALHEAKIHPERLAPDLTSREASG------LHKAIIEVISSGIKHRGTTFRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q+ VY + G PC +CG+ I+RI AGRS++YC+ CQK Sbjct: 226 YVDGEGRSGSYQHQLKVYNREGLPC-PHCGKPIQRIKVAGRSSYYCSSCQK 275 >gi|148544470|ref|YP_001271840.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri DSM 20016] gi|184153835|ref|YP_001842176.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227363102|ref|ZP_03847237.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|325682792|ref|ZP_08162308.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] gi|148531504|gb|ABQ83503.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus reuteri DSM 20016] gi|183225179|dbj|BAG25696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227071820|gb|EEI10108.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|324977142|gb|EGC14093.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] Length = 276 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I ++ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGRYY----NQPIGGPIDKHTHVVFEFTDGT-----ELCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L N + +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|290893965|ref|ZP_06556941.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] gi|290556503|gb|EFD90041.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] Length = 273 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFSTGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|300173771|ref|YP_003772937.1| formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] gi|299888150|emb|CBL92118.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] Length = 287 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L L F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIVGGQITQVHLLYPKLINGDSQAFITGVTNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E + + +H + L + RV YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVE----SIETRPYKHTEIIFELLDQR-----RVFYNDTR 111 Query: 121 RFGFMD-LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M P L LGPEP + Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVDIFSRSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T++L L L + I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTKTLTVRE------LSLLRENIIAEMKRAIAHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTTMVKIKVGQRGTTFCPACQ 273 >gi|187932021|ref|YP_001892006.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712930|gb|ACD31227.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 274 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + LI I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLISSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|194466652|ref|ZP_03072639.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] gi|194453688|gb|EDX42585.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] Length = 276 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGKYY----NQPIGGPIDKHTHVVFEFTDGT-----ELCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L N + +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPRCQ 272 >gi|300811969|ref|ZP_07092427.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497048|gb|EFK32112.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 274 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEGFVKIKISGRGTTYCLHCQK 272 >gi|156502993|ref|YP_001429058.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253596|gb|ABU62102.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 274 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|226224165|ref|YP_002758272.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Clip81459] gi|225876627|emb|CAS05336.1| Putative formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 273 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|62261847|gb|AAX78021.1| unknown protein [synthetic construct] Length = 309 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 27 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 86 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 87 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDN-----LSLVYNDPR 138 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 139 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 198 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 199 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 252 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 253 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 300 >gi|56707813|ref|YP_169709.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89256827|ref|YP_514189.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110670284|ref|YP_666841.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115315213|ref|YP_763936.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118497202|ref|YP_898252.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida U112] gi|134302414|ref|YP_001122384.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|167009866|ref|ZP_02274797.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC200] gi|194323501|ref|ZP_03057278.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208778995|ref|ZP_03246341.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|224456884|ref|ZP_03665357.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254368108|ref|ZP_04984128.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|254369711|ref|ZP_04985721.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|254370309|ref|ZP_04986314.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874627|ref|ZP_05247337.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|81677082|sp|Q5NGY3|FPG_FRATT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56604305|emb|CAG45326.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89144658|emb|CAJ79982.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110320617|emb|CAL08709.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115130112|gb|ABI83299.1| DNA-formamidopyrimidine glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118423108|gb|ABK89498.1| formamidopyrimidine-DNA glycosylase [Francisella novicida U112] gi|134050191|gb|ABO47262.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134253918|gb|EBA53012.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|151568552|gb|EDN34206.1| hypothetical protein FTBG_00064 [Francisella tularensis subsp. tularensis FSC033] gi|157122670|gb|EDO66799.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|194322356|gb|EDX19837.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208744795|gb|EDZ91093.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|254840626|gb|EET19062.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158989|gb|ADA78380.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis NE061598] Length = 274 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|311031366|ref|ZP_07709456.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. m3-13] Length = 277 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L+ +++ T+ + + + + F G++I+ + RR K Sbjct: 1 MPELPEVETVRKTLVELVQGKTIKQVKVLWPKMIKEPDDAALFEEMLIGQEIVKIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + H HV ++T + Y D Sbjct: 61 FLLFYL-TDYCMVSHLRMEGKYGLFQKEEPANK----HTHVFFYFEDDT-----ELRYQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L + + L +LGPEP ++ FN L + K N N+K LL+Q +V Sbjct: 111 VRKFGTLHLYKKGEELAAKSLASLGPEPFEDEFNLDLLKERLAKTNRNIKAVLLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R + SL + L +L +EI L +A+D GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERISSSLNEKE------LIELQREIVLTLQEAVDKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GEPC CG I + V AGR T C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEPC-RKCGHEIEKTVVAGRGTHTCPKCQ 273 >gi|187477042|ref|YP_785066.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] gi|123514466|sp|Q2KYB7|FPG_BORA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115421628|emb|CAJ48138.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] Length = 275 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 141/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P + + ++ RR KYL Sbjct: 1 MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS A +H+HV + + +DPR Sbjct: 61 LLR-FEHGVQIVHLGMSGSLRRVAMDEA----PRKHDHVDWVFDH------AILRLHDPR 109 Query: 121 RFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L LG EP D F+ +L F K +K ALL V Sbjct: 110 RFGAVLWHPNTDGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+RA + P L + +L Q ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASECLFRAGIDPRTPAGKLSRPR------CERLAQAVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G C CG IRR+VQ R+T++C +CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLAC-RVCGTPIRRLVQGQRATYFCPHCQK 274 >gi|315282487|ref|ZP_07870891.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] gi|313613871|gb|EFR87611.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] Length = 273 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTSKYGEAETRSIKKLGPEPLTEAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFAAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGK GE C+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKAGESCV-ICGTPIEKIKLNGRGTHFCPNCQK 273 >gi|313608605|gb|EFR84469.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-208] Length = 273 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + + + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVCPERAANSLSDKE------IKHIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|322411307|gb|EFY02215.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 275 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + N+ F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPNMVKSDLRIFLQILPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + H HV +L N + ++Y D R Sbjct: 61 MFD-FGQTVLVSHLRMEGKYLLFPDEVPEQK----HFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLPDFFAQRKLGPEPRKETFKLKPFEVALQSSKKRIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|328675725|gb|AEB28400.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida 3523] Length = 274 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 158/289 (54%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKNIIDKKILDIEINTDKLRYAIDKDQLVKIKNKIVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +E +L +I+HLGMSG + ++ IK H+H+ + L++N ++YNDPR Sbjct: 61 IVVIEDDLQLIIHLGMSGVIKVIDSTNYNKIK---HDHIVLILSDN-----LTLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLLSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + PIR + ++ + KL+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPIRASNTITKKE------AEKLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V R+TF+C CQK Sbjct: 227 NTEGKPGYFAQQLNVYGRVNQQCY-VCNTRIESLVIGQRNTFFCKKCQK 274 >gi|258652106|ref|YP_003201262.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] gi|258555331|gb|ACV78273.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] Length = 285 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 145/293 (49%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L+ + + + +H + +R P F A G+ + DV RR Sbjct: 1 MPELPEVETVRRGLLTHLAGRRIRTVRVHHDRAVRRHPGGPDDFQAVLAGRLVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++ HLGMSG F + A PI P H H+ I + + + Sbjct: 61 KYLWWALDDGDAVLAHLGMSGQFRV--AGPAGPIPEPLHPHLRIRFDFDDAGPS--LDFL 116 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M + + + +P D F+A K + +K ALL+Q +V Sbjct: 117 DQRTFGGMTYAPGGAEL-PAAIAHIARDPLDPEFSAAGAVAALRHKRTGIKRALLDQTVV 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R T L + ++ +V+ DA+ GG+S Sbjct: 176 SGVGNIYADEALWRARMHFDRPTERLTRPQ------AATVLAAATEVMTDALAVGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + +VYG+ PC CG IRR RS+++C CQ+ Sbjct: 230 ALYVNVNGESGYFDRSLNVYGRADRPC-PRCGTPIRRSAFMNRSSYWCPRCQR 281 >gi|33151884|ref|NP_873237.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] gi|39931237|sp|Q7VN67|FPG_HAEDU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33148105|gb|AAP95626.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] Length = 274 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + LR+ A G KI+ +SRRAKYL Sbjct: 1 MPELPEVETCLRGIEPYLAGQTIQQIVIRTPKLRWPISAELCA-MSGAKILALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I I+VHLGMSGS + ++S K +H+HV + + YNDPR Sbjct: 60 IIHT-ERGDILVHLGMSGSLTLLNSSQP--TKASKHDHVDLITEAG-----IILRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + YP + LGPEP ++F + YL + K +KN ++N IV G+ Sbjct: 112 KFGAWLWAK--QAENYPLITKLGPEPLSDTFTSDYLFKKSRNKTVAVKNFIMNNDIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P ++L + L IQ VL AI GG++L+D+ Sbjct: 170 GNIYASESLFMAGVHPELAAQNLTEKQCVQ------LRNVIQAVLTKAIIQGGTTLKDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I+ V R++++C CQ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEEC-RECGTLIQAKVIGQRNSYFCPDCQ 270 >gi|119503521|ref|ZP_01625604.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] gi|119460583|gb|EAW41675.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] Length = 269 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR+ A G++I+ RRAKYL Sbjct: 1 MPELPEVETTRRGIDPHAVDRCIERVVIRNAQLRWPIEDGLPALAAGQRILRTRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+LE + +++VHLGMSGS I S H+HV I L + + YNDPR Sbjct: 61 LIDLEHH-TLMVHLGMSGSLRIMPASTP----PMFHDHVDIVLNDGNC-----LRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + LR LGPEP N F+ ++L + + +K L++ +IV G+ Sbjct: 111 RFGSLHILTSDD---HALLRHLGPEPLSNDFDGVWLYEAARGRKAAVKQFLMDGRIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L + ++ +L AI+ GG++LRD+V Sbjct: 168 GNIYANEALFMAGIRPTRSAGKIS------LIRYQRLAEAVKVLLAAAIERGGTTLRDFV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ + C C ++ I RS+ +C CQ+ Sbjct: 222 GGDGKPGYFAQELRVYGRGNQLC-RACSGRLQEIRLGNRSSVFCPACQR 269 >gi|325685807|gb|EGD27880.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 273 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V+R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVNRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E +W+++++P+ L ++ L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVIWQSRINPLTPANELTKDQVKC------LHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|195978526|ref|YP_002123770.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975231|gb|ACG62757.1| formamidopyrimidine-DNA glycosylase MutM [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 296 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTILGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ + H HV +++T+ + ++Y D R Sbjct: 85 LFD-FGQLVMISHLRMEGKYLLFSDTVPDQK----HFHVFLTMTDGST-----LVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S + R LGPEP +F ++K LL+Q +VAG+ Sbjct: 135 KFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAAKVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGAAIVKLKVGGRGTHVCPRCQR 296 >gi|254831965|ref|ZP_05236620.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S] Length = 273 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDK------KIKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|94989918|ref|YP_598018.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] gi|94543426|gb|ABF33474.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] Length = 275 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWVAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|192360935|ref|YP_001983958.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] gi|229541072|sp|B3PG51|FPG_CELJU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190687100|gb|ACE84778.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] Length = 270 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VTD+ + + LR+ P S G+++ SRR KYL Sbjct: 1 MPELPEVETTLRGVSPHILGRKVTDLVIRQPRLRWPIPLELSEQLPGQQLKAASRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++HLGMSGS I H+H + N + Y DPR Sbjct: 61 LL-SFNTGTALIHLGMSGSLRIVKPEEP----PLFHDHFDMHFGN------RILRYCDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E +Q+ LR LGPEP + F YL + K+ +K +++ KIV G+ Sbjct: 110 RFG-CLLWEAGDIHQHALLRDLGPEPLGDDFTPAYLYERSRKRTQAIKQFIMDSKIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + PIRK +L + + L+++I+ VL +I GG++LRD+V Sbjct: 169 GNIYANESLFMAGIKPIRKAGALSR------HMCEDLVRDIRFVLQRSITQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C + C + ++ I R+T YC CQ+ Sbjct: 223 GGDGKPGYFQQQLLVYGRGGEACKT-CQKPLKEIRMNDRTTVYCVTCQQ 270 >gi|167464952|ref|ZP_02330041.1| formamidopyrimidine-DNA glycosylase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382877|ref|ZP_08056712.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153146|gb|EFX45601.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 286 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 143/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ T+ + + + F+ G+ I + RR K Sbjct: 1 MPELPEVETVKRTLNELVVGKTIEQVEVRLSRIIQKPLNIEEFALLLEGQTIERIDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + ++ HL M G + + ++ H HV T+ T+ + Y D Sbjct: 61 FLKF-IFTDYVLVSHLRMEGRYGVYLSNDP----VENHTHVLFHFTDGTD-----LRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PPL LG EP D +F H K + +K LLNQ+ + Sbjct: 111 VRQFGTMHLFPKGQEELDPPLNKLGLEPLDETFTFERFYQTIHHKTTRIKPLLLNQEYIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P +T L + L KL + I L ++D GGSS++ Sbjct: 171 GVGNIYVDEALYTAGIHPETETHLLTKKE------LRKLHEAIVHTLQSSVDVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+ +YG+T E C + CG +I ++V GR T C CQ Sbjct: 225 YVNGQGEMGMFQHQLKIYGRTSELC-TQCGGVIVKMVVGGRGTHICPTCQ 273 >gi|94993817|ref|YP_601915.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|139474273|ref|YP_001128989.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] gi|94547325|gb|ABF37371.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|134272520|emb|CAM30783.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] Length = 275 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|15674603|ref|NP_268777.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71910221|ref|YP_281771.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] gi|21362547|sp|Q9A131|FPG_STRP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|13621714|gb|AAK33498.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71853003|gb|AAZ51026.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] Length = 275 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|19745616|ref|NP_606752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|56808814|ref|ZP_00366528.1| COG0266: Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M49 591] gi|94988038|ref|YP_596139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94991924|ref|YP_600023.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209558972|ref|YP_002285444.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] gi|24211705|sp|Q8P250|FPG_STRP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|19747744|gb|AAL97251.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|94541546|gb|ABF31595.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94545432|gb|ABF35479.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209540173|gb|ACI60749.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] Length = 275 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|146294967|ref|YP_001185391.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|145566657|gb|ABP77592.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|319424485|gb|ADV52559.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens 200] Length = 271 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV+D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLIEQTVSDLVIRNGSLRWPVP-DIAKHIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRILPHNTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVNQLATALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDNER------LSLLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C +NCG ++ I R+T +C+ CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TNCGNLLSEIRLGQRTTVFCSICQ 269 >gi|227543927|ref|ZP_03973976.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300909676|ref|ZP_07127137.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] gi|227186078|gb|EEI66149.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300893541|gb|EFK86900.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] Length = 276 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGKYY----NQPIGGPIDKHTHVVFEFTDGT-----ELCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L + + +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTASQ------ITELRKNIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|149195827|ref|ZP_01872884.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] gi|149141289|gb|EDM29685.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] Length = 276 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 158/292 (54%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L ++ T+ + LR + F+ GKKI + RR+KY Sbjct: 1 MPELPEVETVKNALAPYIEGETIKSFHFYTPRLRQELDAALFNKTFSGKKITRLKRRSKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL E + I+ HLGM+GS+ I C + +H H++I L N+ + Y DP Sbjct: 61 LLFEFDDQKWILSHLGMTGSWRI----CKLTEERKKHEHISIRLDNDQ-----ELRYCDP 111 Query: 120 RRFGFMDLVETSLKYQYPPL--RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG ++ L P LGPEP D S++ YL K +KN +++ + V Sbjct: 112 RRFGEFRVITAPLDSTTDPQALSHLGPEPFDESYSQEYLWDLSRSKTKPIKNFIMDPRTV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+R +SP+RKT K LI Q VL AIDAGG+++ Sbjct: 172 CGIGNIYASETLFRCGISPLRKT------QKLRKKDCLNLINHSQSVLQSAIDAGGTTII 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DGS G+F +VYG+ GE C+ C ++I+RIVQAGRS+FYC CQK Sbjct: 226 DFQAPDGSEGWFHQQLNVYGREGEDCV-QCDKIIKRIVQAGRSSFYCPGCQK 276 >gi|312898330|ref|ZP_07757720.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] gi|310620249|gb|EFQ03819.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] Length = 273 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L V+ T+T I + L + FS A G V R+ KY Sbjct: 1 MPELPEVETVRATLEPVLTGRTITHIDITLPRLIKNATVEAFSKALSGCTFTAVGRKGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + +G+ ++VHL M+GS I + + P+ H+ L + Y D Sbjct: 61 LRLCTDGSSDLLVHLRMTGSLIYDAAGNNR----PKTAHIVFHLDKG------LLYYCDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L + K LGP+ ++ A YL + + +K+ LL+Q ++AG Sbjct: 111 RTFGCLWLAKPGEKTGISGYDDLGPDANSSAVTADYLREKMKASSRTVKSFLLDQTVLAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P R+ K+ +L + I VL + I+ GG+++RD+ Sbjct: 171 LGNIYVDEALFLAGIRPSRRCN------HIGKERTQRLAKAIHTVLAEGIEYGGTTIRDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ G G Q +VYG+ G PC + CG +I+ + Q GR T YC +CQ Sbjct: 225 VNGSGREGENQENLAVYGREGTPCKT-CGTLIKYVKQGGRGTHYCPHCQ 272 >gi|240950195|ref|ZP_04754482.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] gi|240295282|gb|EER46068.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] Length = 274 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTE-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I+VHLGMSGS I S +P+ H + + YNDPR Sbjct: 60 ILHT-EKGDILVHLGMSGSLGILKESDNQPVGKHDHVDLI-------TETGTILRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGAWLWAK--EALKHELLAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTEKQ------CERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEAC-NDCGSFIETKIIGQRNTYFCPHCQK 271 >gi|315648810|ref|ZP_07901905.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315275778|gb|EFU39130.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 278 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + +H + R D F+ + + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDQVSVHLPRIIQRPDDAEAFAFMLKDHTVQGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRI-LLDGLVLVSHLRMEGRYGLYRAEEP----VEKHTHVIFHFSDGT-----ELRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++++ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFKHAPLAKLGYEPLDDTFTLGTFKQVIGSKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A++AGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERSANSLKDAE------LKRLYHAIVDTLSEAVNAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ +PC CG + ++V GR T YC CQ Sbjct: 225 YVNGQGEMGMFQHSHQIYGRKDKPC-HACGGPVHKMVVGGRGTHYCPKCQ 273 >gi|88859719|ref|ZP_01134359.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] gi|88818736|gb|EAR28551.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] Length = 271 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ + +H LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMLLKTIRTVRVHHWQLRWPVPKEMEQ-LAGQTITAIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++I+HLGMSG+ I + A +H+H+ I L + + NDPR Sbjct: 60 QL-VTPIGTVILHLGMSGNLRIVDKAVAL----KKHDHIEIELESG-----LVLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LGPEP ++FN L Q K + +K +++ K V G+ Sbjct: 110 RFGACLWQAPGETHSVF--AKLGPEPLTDAFNPEQLFEQAKNKKTAIKQFIMDNKFVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++AK+ P L + L+ I++ L AI GG++L+D+ Sbjct: 168 GNIYANEALFKAKIHPQTPAGQLQLADFV------ALVPIIKQTLAQAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G+PC+ C ++ I RST +C CQ Sbjct: 222 QTDGKPGYFAQELQVYGRKGKPCV-QCDTVLLEIRLGQRSTVFCPSCQ 268 >gi|322517150|ref|ZP_08070034.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] gi|322124300|gb|EFX95811.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] Length = 273 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKIPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ H H+ L + + ++Y D R Sbjct: 61 IFD-FGQLIMISHLRMEGKYLLFTDQVPTNK----HFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELSKA------AMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|104774357|ref|YP_619337.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983913|sp|Q1G9A3|FPG_LACDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|103423438|emb|CAI98311.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 273 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|33594050|ref|NP_881694.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|161609281|ref|NP_887446.2| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] gi|39931242|sp|Q7VUG7|FPG_BORPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33564124|emb|CAE43396.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|332383467|gb|AEE68314.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis CS] Length = 275 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 142/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS + +H+HV + + +DPR Sbjct: 61 LLR-FDHGVQIVHLGMSGSLR----RVPEQEAPRKHDHVDWVFDH------AVLRLHDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +P L LG EP D F+ +L F + +K ALL V Sbjct: 110 RFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + + +L I+ L DA+D+GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTAAQRVSAAR------CDRLAAAIRATLSDALDSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYFCPSCQK 274 >gi|301794108|emb|CBW36514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV104] gi|332204973|gb|EGJ19038.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47901] Length = 274 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRCLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + H HV + ++Y D R Sbjct: 61 LFYL-TDKVLISHLRMEGKYFYYPDQGPERK----HAHVFFHFEDG-----GTLVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|322513603|ref|ZP_08066701.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] gi|322120563|gb|EFX92463.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] Length = 273 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLQGKTIKQIVIRTNKLRWAISDEL-QQMQGAKIVSLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLSILPENQQTAGK---HDHVDLITQDGTI-----LRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP +F A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTQNAEQHELITRLGPEPLLEAFTAKYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P T++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGIHPELATQNLTEKQ------CERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++C I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCRTAIEAKVIGQRNSYFCPHCQ 269 >gi|71903062|ref|YP_279865.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] gi|90101320|sp|Q48UU6|FPG_STRPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71802157|gb|AAX71510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] Length = 275 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPGTASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|307546413|ref|YP_003898892.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] gi|307218437|emb|CBV43707.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] Length = 305 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + ++ + + LR P + G + + RRAKYL Sbjct: 32 MPELPEVETTRRGIAPHVEAREIREVIVRQSRLRHPVPEDLADRLVGAHLGRLDRRAKYL 91 Query: 61 LIEL--EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + E +++ HLGMSGS I +H+HV + L + + Y+D Sbjct: 92 LMPVVGERGGTLLCHLGMSGSLRIARLG----ELPKKHDHVDLVLDDGAI-----LRYHD 142 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFGF+D ++ + L LGPEP +F+ L K+ +K L++ +V Sbjct: 143 PRRFGFIDWLD-GDVARDRRLAKLGPEPLSEAFDGERLYAMSRKRRLAVKPFLMDNAVVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P R+ + + T +L + I++VL AI GG++LRD Sbjct: 202 GVGNIYAAEALFLAGIDPRREAGRISRERYT------RLAEAIREVLAAAITQGGTTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V G GYF +VYG+ GEPC CG +R + R++ +C CQ+ Sbjct: 256 FVSGTGEPGYFAQRLNVYGRDGEPC-RRCGAELRLVTLGQRASVFCAACQR 305 >gi|297569572|ref|YP_003690916.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] gi|296925487|gb|ADH86297.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] Length = 305 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 149/297 (50%), Gaps = 15/297 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + I LR P G ++ VSRRAKY Sbjct: 1 MPELPEVEVVRRGLEPLVLQRQIARISASGLPLRRPVPLAELRRWGEGARVTGVSRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY------R 113 LL+ L+ + +I HLGM+G F + H+ + + + Sbjct: 61 LLLHLDNSALLIFHLGMTGKFYPAVADDPPRKHDHLVLHLNDHANDGHGGRGASGQKVAQ 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS-FNAIYLTHQFHKKNSNLKNALL 172 + +ND RRFG + + + L LGPEP D+ F YL + + + +KN L+ Sbjct: 121 IRFNDCRRFGLVAVCAPAETTAPALLAGLGPEPLDDKAFTPAYLAQRCAHRRTPIKNLLM 180 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 + ++V GIGNIY E L+ A + P + + L K+ +++L AI AG Sbjct: 181 DNRVVVGIGNIYANEVLFAAGVHPQTPAGEISRAR------LKKICAAAREILTRAIAAG 234 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+++ D+ + G GYFQ +VYG+ G+PC CG+ I R VQAGR+T++C CQ+ Sbjct: 235 GTTIADFANAAGESGYFQVQLAVYGRGGQPC-PRCGREIVRQVQAGRATYFCPRCQR 290 >gi|297583658|ref|YP_003699438.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] gi|297142115|gb|ADH98872.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] Length = 286 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 147/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ D+ + + + F+ G+ I + R+ K Sbjct: 1 MPELPEVETVRQTLTELLIGRTIEDVWVGWPAMIKEPDDVERFALMLTGQTIQSIGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + L+ ++ HL M G + ++ + H HV I T+ T + Y D Sbjct: 61 FLKLYLDDC-VLVSHLRMEGKYALKEAGSERSK----HTHVVIRFTDGT-----ALHYAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M + Q PPL +GPEP + A L + K +K ALL+Q +V Sbjct: 111 VRKFGTMHAFVKGTEEQRPPLSKVGPEPVGKDRITADELGTRLKKTTRAVKAALLDQSLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA + P +L ++ L+ I L +AID GG+S+R Sbjct: 171 AGLGNIYVDEALFRAGIHPAVPAHTLPDK------LIPVLLSAISDTLQEAIDQGGTSIR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +GYFQ VYG+TGEPC CG I R V GR T C CQ Sbjct: 225 SYVNGKGEMGYFQQQLFVYGRTGEPC-RKCGTPISRSVVGGRGTHTCEVCQ 274 >gi|251781944|ref|YP_002996246.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390573|dbj|BAH81032.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 275 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + H HV +L N + ++Y D R Sbjct: 61 VFD-FGQTVLVSHLRMEGKYLLFPDEVPEQK----HFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|332995179|gb|AEF05234.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas sp. SN2] Length = 269 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ +I + + +R+ P + A G+K+I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPYLLNETIDNIIVRERRMRWPVPEDVALAI-GQKVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE E ++I+HLGMSG + S +H+HV I + + +NDPR Sbjct: 60 MIETEA-GTLILHLGMSGKLRVIDASTP----VAKHDHVDIVMATGKC-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + F+ L K S +KN +++ +V G+ Sbjct: 110 RFGAFLWQPPGEAL--KLLANLGPEPLTDDFDDRRLFTLSRGKKSTVKNFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + L Q I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRREAGKVSSTR------YKNLTQIIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF +VYG+ GEPC C I+ V R+TF+C CQ+ Sbjct: 222 QTDGNPGYFAQHLNVYGRKGEPC-EVCKTEIQSKVIGQRNTFFCKQCQR 269 >gi|157963915|ref|YP_001503949.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] gi|189044678|sp|A8HA27|FPG_SHEPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157848915|gb|ABV89414.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] Length = 271 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TVTD+ + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNTVTDLIVRNPSLRWPVP-EIAKQIIGQTIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + +H+H+ + L + + +NDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRILPATTP----AEKHDHIDLVLASGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FNA YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLESLANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVDAER------IEILVSEVKQILAGAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ G+ C + CG M+ I R+T +C+ CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGKTC-TQCGHMLSEIKLGQRATVFCSLCQQ 270 >gi|88606811|ref|YP_505015.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] gi|88597874|gb|ABD43344.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] Length = 268 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R+L + + D+ + R++LR F G++I V R AKYL Sbjct: 1 MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVRIADDFEQLVTGREICSVYRVAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+ ++ H+GMSG + H + +H+ V ++ + Y +++ND R Sbjct: 61 VMQLDSGAKLVFHMGMSGRILYMHAPVPE-----KHDCVVFAMQHG-----YSLVFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + L +GP+P +FNA L + + +K+ L+N +V GI Sbjct: 111 RFGLVTLL--DGEGYRSLLEKMGPDPFSEAFNADCLLNM--HGKARIKSVLMNSAVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R+ +L + ++++ ++VL AI GGSS+RDY Sbjct: 167 GNIYASEILFTAAILPHREVSTLSREECC------RIVESTREVLKLAIATGGSSIRDYR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +G F F VYG+ GE C + CG I+ Q GRSTF+C +CQK Sbjct: 221 TPTGDVGNFSKHFRVYGRKGEKCYT-CGGEIQVEKQGGRSTFFCRHCQK 268 >gi|293607619|ref|ZP_06689953.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] gi|292814052|gb|EFF73199.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] Length = 275 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 143/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLKRLVIHEARMRWPIPTDLPALIGGRDVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS H+HV N + +DPR Sbjct: 61 LLR-FEHGTQIVHLGMSGSLRSVAPGEFLRK----HDHVEWIFEN------AVLRLHDPR 109 Query: 121 RFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L LG EP D F+ +L F + +K LL V Sbjct: 110 RFGAVLWHADADGPIDAHPLLAKLGIEPFDPRFDGAWLHRHFKNHGAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRARINPKTPANKLSLAR------CERLADMVRATLADALTSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G+PC C IRR VQ R+T+YC CQ+ Sbjct: 224 YVGATGEPGAYFDIHAAVYEREGKPC-RVCETPIRRFVQGQRATYYCPKCQR 274 >gi|114049458|ref|YP_740008.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] gi|123130915|sp|Q0HPK4|FPG_SHESR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113890900|gb|ABI44951.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] Length = 271 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLIVRNASLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|254824377|ref|ZP_05229378.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] gi|293593612|gb|EFG01373.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] Length = 273 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 273 >gi|56459356|ref|YP_154637.1| formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] gi|81678420|sp|Q5QZC1|FPG_IDILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56178366|gb|AAV81088.1| Formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] Length = 270 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ T+ + +H K LR+ P G + VSRR+KYL Sbjct: 1 MPELPEVEVSRLGISPHIEGRTIKSVKVHDKRLRWPVPETVHK-VEGHVLRSVSRRSKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ N +I+HLGMSG + + +H+H+ I N + NDPR Sbjct: 60 LLQT-DNGCLILHLGMSGKLRVVPAET----THYKHDHIDIEFDNGQT-----LRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E S + L LGPEP ++FN YL + ++ ++K L++ K+V G+ Sbjct: 110 RFGALLYSE-SDVSGHELLSQLGPEPLTDAFNIDYLFERSRGRSQSVKTFLMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A ++P R + K KL+ I++ L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFKAGINPKRAAGKIS------KVRYQKLVPIIKETLASAIELGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF VYG+ G+ C+ C ++ + RST YCT CQ+ Sbjct: 223 QVDGNPGYFAQKLQVYGRGGKLCM-VCSNRLKEVRLGQRSTVYCTQCQR 270 >gi|91205062|ref|YP_537417.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157827633|ref|YP_001496697.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] gi|123388145|sp|Q1RJY6|FPG_RICBR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198741|sp|A8GXR0|FPG_RICB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91068606|gb|ABE04328.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157802937|gb|ABV79660.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] Length = 273 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + + R NLR+ + II+V RRAKYL Sbjct: 1 MPELPEVETLKNSLESKLIGLVIKKVEFKRDNLRYKLSADLADQIVNTNIINVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ N S+IVHLGMSG F ++ + + +H+HV +L+NN ++I+ND R Sbjct: 61 IIDFNNNHSLIVHLGMSGRFTLQPNNY----EVKKHDHVVFNLSNNE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L EP +SF YL + K +KN L++ +IV G+ Sbjct: 112 RFGMIYSF-HTELLEKDFFANLALEPLSDSFELQYLKSKLMNKKVPIKNLLMDNRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L AK+ P + + L + + LI ++ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLAKIHPDKFGKDLNDDE------IKNLIAAVKNVLSKAIIAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D GYF VY + G+ CLS C I + +GRSTFYC CQK Sbjct: 225 NGDNKPGYFTQQLMVYARDGQECLS-CSSSIIKTKHSGRSTFYCKSCQK 272 >gi|145301060|ref|YP_001143901.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] gi|166215608|sp|A4STD1|FPG_AERS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|142853832|gb|ABO92153.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 270 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I VSRRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEIQE-LVDLTIHRVSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +HLGMSGS + + +H+HV I L N + NDPR Sbjct: 60 LLET-DFGTADLHLGMSGSLRVLNIGTP----AEKHDHVDIELANGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++FNA YL + +++ +K L++ +V G+ Sbjct: 110 RFGALLW-TREPAEAHALLAKLGPEPLTDAFNAEYLQGRAKGRSTAIKTFLMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L L+ EI++VL AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAAGNISAER------LETLVAEIKRVLASAIQQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+ C C ++ I R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQACFH-CHTLLSEIRLGQRTTVFCSHCQR 270 >gi|294338795|emb|CAZ87129.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Thiomonas sp. 3As] Length = 291 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 147/296 (49%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L + +T + L + LR+ G +I + RR KYL Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLGKP-LRWPLNID-PQTLVGLRIKALERRGKYL 58 Query: 61 LIE-------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ +IVHLGMSGS + A +P H HV T + Sbjct: 59 LLRLSQTAAAPNTAGVLIVHLGMSGSLRWTPAAQAPAPLSP-HEHVEW------LTDRGV 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + ++P LR LGPEP F+ L + + +K LL+ Sbjct: 112 LRLRDPRRFGAVLWHAGDEVQRHPLLRVLGPEPLGADFDGATLCRALAGRKAAIKPLLLS 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAGIGNIY CEAL+RA++ P +L +++ L A+ GG Sbjct: 172 QHIVAGIGNIYACEALFRAQIDPRTPAS------HLRPVHCDRLAAAVRETLRQAVALGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C CQK Sbjct: 226 SSLRDFAHSDGELGYFQMQALVYGRAGQPC-RVCATPIRQIVQGQRSTYFCPKCQK 280 >gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc argentinum KCTC 3773] Length = 280 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L + F R + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQITQVKLPYPKVITGDSQAFITGVRNAYFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E +H + L ++ + YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPIDA----TPHKHTEIIFELADDR-----VLFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T+ + P L LGPEP + +F + +K+ LL+Q +AG Sbjct: 112 RFGRMVLATTNQETLAVPALGKLGPEPTAQDLTLADMVAKFARSKKPVKSFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L Q I + AI+ G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANLLSE------MQLATLRQNIISEMARAIEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ +PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVDQPCL-RCGTPLVKIKVGQRGTTFCPVCQ 273 >gi|15892961|ref|NP_360675.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] gi|21362545|sp|Q92GT4|FPG_RICCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15620156|gb|AAL03576.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] Length = 273 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 160/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + T I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATETLNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKEFLND-LGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + +L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNNLRDDE------IENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|46907795|ref|YP_014184.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47093101|ref|ZP_00230878.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] gi|67460686|sp|Q71ZA3|FPG_LISMF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46881064|gb|AAT04361.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47018541|gb|EAL09297.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] Length = 273 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 273 >gi|50913780|ref|YP_059752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] gi|73919596|sp|Q5XDE4|FPG_STRP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50902854|gb|AAT86569.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] Length = 275 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLKALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAVLLSSKKTIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NTLGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|302024112|ref|ZP_07249323.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05HAS68] gi|330832409|ref|YP_004401234.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] gi|329306632|gb|AEB81048.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] Length = 275 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 144/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L + +I HL M G + + +H H + ++ + ++Y D R Sbjct: 61 LIYLTDH-VLISHLRMEGKYNFF----PDQVPANKHFHAFFTFSDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|9971915|gb|AAG10477.1|AF279106_39 predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC31A08] Length = 270 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + K + + +H +NLR+ F + + + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIKKF-KGSLLKEARIHNRNLRWKVVDSFETSVKDQVVESLERRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L + II+HLGMSGS I + IK H+H+ + R+IYNDPR Sbjct: 60 IFKLSNDKKIILHLGMSGSLRIAKNNENFFIK---HDHIELIFDEE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L TS ++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHL--TSDIDKHKLIKNLGPEPLSKNFNAKDFFSGCSHSKTNIKSYLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P++ D +L+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLAKIHPLKNANE------LDLDACKRLVAAGKKILEQAIEVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ GEPC + C I + + R+TF+C CQ Sbjct: 223 SADGSPGYFKFKLNVYGREGEPC-NKCKGTICKTIVNQRATFFCEACQ 269 >gi|67906503|gb|AAY82610.1| predicted formamidopyrimidine-DNA glycosylase [uncultured bacterium MedeBAC35C06] Length = 269 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 163/289 (56%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L ++ + + ++ +NLR+ F KKII ++RRAKY+ Sbjct: 1 MPELPEVETTMSALQPFVE-KKIVSVDINNRNLRWKIEKDFEKNISNKKIISIARRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + II+HLGMSG+ I+ K H+H+ + L + +IYND R Sbjct: 60 IF-NLSDGFIILHLGMSGNIRIQDLKSNTYKK---HDHIILYLKDKK------IIYNDIR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + ++ LGPEP + FN YL + K +N+KN ++NQK+V G+ Sbjct: 110 RFGSIHF--TDNAKDHFLIKNLGPEPLLSDFNKKYLFNISRKSKTNIKNFIMNQKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A+++P T S+ + + +L++ I+ +L AI+ GG++L+D+ Sbjct: 168 GNIYASEALFEARINPNMITNSISEED------CKRLVKSIKNILKIAINMGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DGS GYF+ VYG+ + C S C +I++IV RSTFYC CQK Sbjct: 222 SVDGSEGYFKIKLKVYGRENKKCKS-CKGVIKKIVLNQRSTFYCLDCQK 269 >gi|323126769|gb|ADX24066.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 275 Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + H HV +L N + ++Y D R Sbjct: 61 VFD-FGQTVLVSHLRMEGKYLLFPDEVPEQK----HFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERPSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC +CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PSCGQAISKLKVGGRGTHICPKCQK 272 >gi|307246928|ref|ZP_07528993.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255910|ref|ZP_07537711.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260363|ref|ZP_07542070.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852213|gb|EFM84453.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861178|gb|EFM93171.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865614|gb|EFM97495.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 273 Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGT-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|120596900|ref|YP_961474.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] gi|166198752|sp|A1RE25|FPG_SHESW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120556993|gb|ABM22920.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] Length = 271 Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVEQTVIDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVKQLAAALTGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|190151346|ref|YP_001969871.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264701|ref|ZP_07546281.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692363|sp|B3GZD6|FPG_ACTP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189916477|gb|ACE62729.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870013|gb|EFN01777.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 273 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDG-----MVLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|113972208|ref|YP_736001.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-4] gi|117922515|ref|YP_871707.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. ANA-3] gi|123129981|sp|Q0HDC3|FPG_SHESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198751|sp|A0L2N2|FPG_SHESA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113886892|gb|ABI40944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. MR-4] gi|117614847|gb|ABK50301.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. ANA-3] Length = 271 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLVIRNASLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|239828007|ref|YP_002950631.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] gi|239808300|gb|ACS25365.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] Length = 274 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVEIIRR L+ + T+ DI + + F +G+ I D+ RR K Sbjct: 1 MPELPEVEIIRRTLIPLTAGKTIADIQVFWPKIIKYPADVTEFIETMKGQTIRDIHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + +I HL M G + + H H+ + T + Y D Sbjct: 61 FLKFTLDEH-VLISHLRMEGRYAVCKKEDPIEP----HTHIIFRFIDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP +F A +L + K N +K ALL+Q +V Sbjct: 111 VRKFGTMHLYRKGEEEARLPLSQLGPEPFSETFTANFLAQRLRKTNRTIKTALLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L+RA + P R + SL + +L +E+ +L +AI+ GGS++R Sbjct: 171 GLGNIYVDESLFRAGIHPERISSSLTDEE------VARLHREMVTILQEAIEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G G FQ VYG+ GEPC CGQ I++ V AGR T YC +CQ Sbjct: 225 YVNTNGEAGTFQLQLFVYGRKGEPCQ-RCGQPIQKTVVAGRGTHYCAFCQ 273 >gi|71909338|ref|YP_286925.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] gi|90101302|sp|Q479M6|FPG_DECAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71848959|gb|AAZ48455.1| DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] Length = 277 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 150/293 (51%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LR + P + G +++ V RR KYL Sbjct: 1 MPELPEVEVCRRGLEPELAGQVIQGVVIRAPKLRHEIPPALATLLPGCRVVAVRRRGKYL 60 Query: 61 LIELEGNLSI---IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L++ E I+HLGMSG+ +H+H + L + + Sbjct: 61 LLDCERRGVQGTLIIHLGMSGNLRFVPFDLP----PAKHDHFELVLA------GQILRFA 110 Query: 118 DPRRFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + +P L T G EP F A +L +++ +K L++ Sbjct: 111 DPRRFGVVLWQPGPPASAECHPLLATQGIEPLSEMFTAEWLYEAIARRSGPIKPTLMDSH 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V GIGNIY E+L+RA +SP+R + + L+ I++ L DAI AGGSS Sbjct: 171 LVVGIGNIYASESLFRAGISPLRAANRVSRAR------YEILVPAIRETLSDAIAAGGSS 224 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +RDYVH DG G FQ VY + +PCL CG ++R+I QAGRST+YCT CQ Sbjct: 225 IRDYVHSDGGAGCFQIQAGVYDRANQPCL-RCGGVVRQIRQAGRSTYYCTGCQ 276 >gi|251793910|ref|YP_003008642.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter aphrophilus NJ8700] gi|247535309|gb|ACS98555.1| heptosyltransferase family [Aggregatibacter aphrophilus NJ8700] Length = 271 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYIIEKIVVRQPKLRWAVSPELTEF-HHVKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I H+H+ I + N + YNDPR Sbjct: 60 IIHS-EQGYIIGHLGMSGTVRIVPHDSPIDK----HDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ LGPEP + FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTKKLDEFHLFL--KLGPEPLSDEFNADYLFKKSRKKMTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L +N +L+ I+ VL AI+ GG++L+D++ Sbjct: 168 GNIYANESLFLCSLHPMKLVANLTRNQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++FYC CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PRCGTKIESLIIGQRNSFYCPMCQK 269 >gi|313884925|ref|ZP_07818677.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] gi|312619616|gb|EFR31053.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] Length = 282 Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 15/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS--AATRGKKIIDVSRRAK 58 MPELPEVE RR L + +T+ + ++ + +G+ I + RRAK Sbjct: 1 MPELPEVETNRRGLAQCVTGLTIDQVDIYWPRIVKTEMDLLKWSQELQGRTIERMDRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ L L+++ HL M G + +K +H H+ ++ T+ + ++ Y D Sbjct: 61 YLIFVLSQGLALVSHLRMEGKYFYYPVDQIPEVK-GKHVHLIMTFTDGS-----QLQYQD 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG +L+ + Y + +GPEP SF K + +K ALL+QK+VA Sbjct: 115 VRKFGRFELMPQTELADYFKAKKIGPEPTPESFKLDGFYASLGKISRAIKPALLDQKLVA 174 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL++A++ P+ + L + + +L I VL A++AGG+++R Sbjct: 175 GLGNIYVDEALFQAQIHPLTPAKDLSYDQAS------RLHAAIIDVLARAVEAGGTTIRT 228 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G G FQ +VYG+T +PC CG I ++V R T YC CQ Sbjct: 229 YLNSLGEAGSFQVQLAVYGQTDQPC-PRCGHPIEKMVVGQRGTHYCPICQ 277 >gi|226942502|ref|YP_002797575.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] gi|226717429|gb|ACO76600.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] Length = 282 Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V + + + LR+ P G++I V RRAKYL Sbjct: 13 MPELPEVETTRRGIAPHLVGQRVERVVVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL 72 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSGS + H HV I L + + Y DPR Sbjct: 73 LIRAEA-GTLIGHLGMSGSLRLVEAGLPAVR----HEHVDILLESG-----LALRYTDPR 122 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ ++ LR LGPEP F+ L K+ +K +++ +V G+ Sbjct: 123 RFGALLW--SADPLEHELLRRLGPEPLGEDFDGERLYRLSRGKSVAVKPFIMDNAVVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 181 GNIYASEALFAAGIDPRRAAGSVSRAR------YRRLAEEIRRILAQAIECGGTTLRDFV 234 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG + + R++ YC CQ+ Sbjct: 235 GGDGKPGYFQQTLLVYGRGGEFC-KVCGSTLHEVRLGQRASVYCGRCQR 282 >gi|114565074|ref|YP_752588.1| formamidopyrimidine-DNA glycosylase [Shewanella frigidimarina NCIMB 400] gi|114336367|gb|ABI73749.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella frigidimarina NCIMB 400] Length = 271 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV+++ + +LR+ P + G++I +V RRAKYL Sbjct: 1 MPELPEVEVTRLGISPYLIEQTVSELIVRNASLRWPVPA-IAQNIVGQRITNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + IVHLGMSGS I + +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GMTIVHLGMSGSLRI----LPRNTPIEKHDHIDLVLENGR-----MLRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP F + L K +K L++ IV G Sbjct: 110 RFGAWLWYELPEE-AHPLLSKLGPEPLSPHFTPLQLQAALAGKKKAIKLCLMDNHIVVGA 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ L L+ E++++L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAAAGSIDLER------LTILVSEVKQILAHAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTA-CGNLLSEIKLGQRTTVFCGLCQQ 270 >gi|71083113|ref|YP_265832.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062226|gb|AAZ21229.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] Length = 287 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 156/300 (52%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS----------CAKPIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ + + P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNISKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELEKRF-SHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L K K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLT------KQDCKKIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|110835444|ref|YP_694303.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] gi|122959249|sp|Q0VLB7|FPG_ALCBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110648555|emb|CAL18031.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] Length = 269 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHLQGRILKSVTVREPRLRWPVSEAIYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + +++HLGMSG+ + H+HV + L + + +NDPR Sbjct: 60 LIEL-EHGQLLIHLGMSGTLRVVDMDLPLRK----HDHVDLLLDSGK-----VLRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L++LGPEP +SFN +L + + +K+ +++ V G+ Sbjct: 110 RFGSVLF--QGGDQPHSLLQSLGPEPLSDSFNGQWLFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + L + I++VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAAGRISLAR------YQALAEAIKRVLAQAIEAGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PC+ C +++ RST YC CQ+ Sbjct: 222 RADGQPGYFAQSLNVYGRAGQPCV-QCDAILKADRHGQRSTAYCPQCQR 269 >gi|28948974|pdb|1NNJ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna gi|49258485|pdb|1PJJ|A Chain A, Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna Length = 271 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 100/287 (34%), Positives = 141/287 (49%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL M G + + + H+H+T+ + +IY D R+F Sbjct: 62 EIGDDFRLISHLRMEGKYRLATLDAPREK----HDHLTMKFADGQ------LIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI++ ++ L I ++L AI GGSS+R Y Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY-SA 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 LGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|91762461|ref|ZP_01264426.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718263|gb|EAS84913.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] Length = 287 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 156/300 (52%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS----------CAKPIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ + + P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNINKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELEKRF-SHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L K K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLT------KQDCKKIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|319942576|ref|ZP_08016885.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] gi|319803872|gb|EFW00794.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] Length = 275 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 145/292 (49%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + VT + + LR +A G + + RRAKYL Sbjct: 1 MPELPEVEVTRRGLAPAIVGRCVTAVNVRTPKLREPL-QDLAALLPGLTLEHLERRAKYL 59 Query: 61 LIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + ++ H+GMSGS+ I K H+H I + V Y Sbjct: 60 IWTFRSAAGEKRWLLTHMGMSGSWRIWPVPAPSAHK---HDHADIVFGD------VLVRY 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + + T + P LG EP D + A + K + ++K LL+ KI Sbjct: 111 TDPRRFGSILFMTTDPRKSLPL-TKLGCEPWDPTLTADRFYTELQKTHRSIKEVLLSGKI 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G GNIY EAL+ A + P R + K +L++ ++K L AI AGGS+L Sbjct: 170 VVGCGNIYCSEALFAAGIRPTRPA------DAISKARAGRLLESVRKTLETAIAAGGSTL 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G+F A +VYG+ G+PC CG+ I RI Q GRSTF+C +CQ Sbjct: 224 HDFHGVSGETGWFPLACAVYGREGKPC-PICGRPITRIEQGGRSTFWCPHCQ 274 >gi|330831601|ref|YP_004394553.1| formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] gi|328806737|gb|AEB51936.1| Formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] Length = 270 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I V RRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPIPGEIQE-LVDLTIHRVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + I+HLGMSGS + +H+HV I L N + NDPR Sbjct: 60 LLET-DFGTAILHLGMSGSLRVLDIGTP----AEKHDHVDIELENGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++F+A YL + +++ +K L++ ++V G+ Sbjct: 110 RFGALLW-TREPAEAHALLAKLGPEPLTDAFSADYLQGRAKGRSTAIKQFLMDNQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L L+ EI++VL +AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAVGNISAER------LGTLVAEIKRVLAEAIRQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC C ++ R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQPCFH-CHTLLTETRMGQRTTVFCSHCQR 270 >gi|303251764|ref|ZP_07337935.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249065|ref|ZP_07531072.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307258095|ref|ZP_07539847.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302649194|gb|EFL79379.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854353|gb|EFM86549.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306863458|gb|EFM95389.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 273 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGT-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|68536282|ref|YP_250987.1| formamidopyrimidine-DNA glycosylase [Corynebacterium jeikeium K411] gi|90101301|sp|Q4JUY8|FPG_CORJK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68263881|emb|CAI37369.1| mutM [Corynebacterium jeikeium K411] Length = 288 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 13/295 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L + TD+ + +R P ++ R + V RR K+ Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVCHPRAVRSGEPEVLVSSLRDATVTAVKRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH----NHVTISLTNNTNTKKYRVI 115 L ++ + + VHLGMSG ++ + + + + ++R+ Sbjct: 61 LWLDFGEDFLLQVHLGMSGQMLVAEPGQVQSPHVRIRAGLSDGRELCFVDQRTFGEWRLE 120 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 P + V + + + + +P + F+A + K + +K LLNQ+ Sbjct: 121 KAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMKSKRAAVKTVLLNQE 180 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY EAL+ A + P R + L++++Q +V+ A++ GG+S Sbjct: 181 VVSGIGNIYADEALFLAGVRPRRSAA------LLSRPTLHRVLQSAAEVMECALEQGGTS 234 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + +VYG+ GEPC CG I+R+V GRST YC CQ+ Sbjct: 235 FDSLYVNVNGASGYFSRSLNVYGRGGEPC-KRCGAPIKRVVVGGRSTHYCATCQR 288 >gi|251795551|ref|YP_003010282.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] gi|247543177|gb|ACT00196.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] Length = 287 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++ + + + + R P F A G+ I V RR K Sbjct: 1 MPELPEVETVRRTLIELVAGKRIASVEVKLPRIIQRPAEPEAFEMALAGRTIQTVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + L ++ HL M G + + + + H HV + T+ + Y D Sbjct: 61 FLRV-VMDGLVLVSHLRMEGRYGVFPSDEPVEL----HTHVLFHFDDGTD-----LRYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M L E +++ PL + +F A L KK +K LLNQ+ V Sbjct: 111 VRQFGTMHLFEPGTEFEMKPLSKLGLEPLENEAFTADALKGLLGKKTGLIKPLLLNQEYV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL+ A + P R SL + +L + I L A+ AGGSS++ Sbjct: 171 VGLGNIYVDEALFLAGIHPERTADSLKKAEWI------RLHEAIVSTLAKAVAAGGSSIK 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+ VYG+ EPC S CG++I + V GR T C CQ Sbjct: 225 SYVNGQGEMGMFQHQLLVYGRKDEPCAS-CGRLIEKSVVGGRGTHTCASCQ 274 >gi|328545945|ref|YP_004306054.1| formamidopyrimidine-DNA glycosylase [polymorphum gilvum SL003B-26A1] gi|326415685|gb|ADZ72748.1| Formamidopyrimidine-DNA glycosylase [Polymorphum gilvum SL003B-26A1] Length = 280 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 125/281 (44%), Positives = 168/281 (59%), Gaps = 10/281 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + +R +LRF FP F A G+ + +SRRAKYLL +L+ +++HLGMS Sbjct: 1 MEGARIRAVDRNRPDLRFPFPEDFEARLTGRNVTALSRRAKYLLADLDDGTVLVMHLGMS 60 Query: 78 GSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF IE S A K+P+H+HV L + R+ YNDPRRFGFM L E Sbjct: 61 GSFRIEAGSGADMPGDFVHARSKDPRHDHVVFHLE-RSEGTAVRITYNDPRRFGFMLLAE 119 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P +G EP N+ + L F K + LK ALL+Q ++AG+GNIYVCEAL Sbjct: 120 RAGLADHPLFARMGLEPLGNALDGAVLAQLFAGKRAPLKAALLDQGLIAGLGNIYVCEAL 179 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WRA LSP R+ S+ + KL I+ VL +AI+AGGSSLRD+ DGS+GYF Sbjct: 180 WRAGLSPTREAGSIAGGSPRGGARCEKLADAIRNVLEEAIEAGGSSLRDHARTDGSLGYF 239 Query: 250 QNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ F+VYG+ GEPC C + RIVQ+ RSTF+C CQ+ Sbjct: 240 QHTFAVYGREGEPCRTPGCPGTVERIVQSNRSTFFCRRCQR 280 >gi|307251263|ref|ZP_07533184.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856779|gb|EFM88914.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 273 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGT-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAISQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|225868141|ref|YP_002744089.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] gi|225701417|emb|CAW98513.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] Length = 281 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 10 MPELPEVETVRRGLERLVVGKQIAAVTVKVPKMVKTDLEHFVMTIPGQQVQGVDRRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ A + + +H HV +++T+ + ++Y D R Sbjct: 70 LFD-FGQLVMISHLRMEGKYLLF----ADTVPDHKHFHVFLTMTDGST-----LVYQDVR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S + R LGPEP +F ++K LL+Q +VAG+ Sbjct: 120 KFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVAGL 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 180 GNIYVDEVLWAAKVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 234 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGAAIVKLKVGGRGTHVCPRCQR 281 >gi|33595501|ref|NP_883144.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis 12822] gi|39931245|sp|Q7W185|FPG_BORPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33565579|emb|CAE40222.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis] Length = 275 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 141/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS + +H HV + + +DPR Sbjct: 61 LLR-FDHGVQIVHLGMSGSLR----RVPEQEAPRKHGHVDWVFDH------AVLRLHDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +P L LG EP D F+ +L F + +K ALL V Sbjct: 110 RFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + + +L I+ L DA+D+GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTAAQRVSAAR------CDRLAAAIRATLSDALDSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLPC-RVCGAPIRRLVQGQRATYFCPSCQK 274 >gi|88705463|ref|ZP_01103174.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88700553|gb|EAQ97661.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 270 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + VT + L LR+ G++I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHCEGRCVTAVVLRDTRLRWPVTPLLPEILNGQRILKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +++VHLGMSGS + KP +H+H+ I L + + YNDPR Sbjct: 61 LFR-MERGTLLVHLGMSGSLRV----LLKPQPAAKHDHIDIELESGA-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ PL LGPEP ++F L + +K +++ V G+ Sbjct: 111 RFGSFQWFVAGEEFT--PLSRLGPEPLSDAFGGKRLFELSRGRKVAVKPFIMDGATVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L + I++VL +AID GG++LRD+V Sbjct: 169 GNIYASEALYLAGIRPDRAAQRVSLAR------YQRLSEHIKQVLTNAIDQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG+++R V R++ YC CQ+ Sbjct: 223 GGDGKPGYFAQQLFVYGRSGEPC-KGCGRVLRDKVIGQRASVYCIACQR 270 >gi|205374552|ref|ZP_03227348.1| formamidopyrimidine-DNA glycosylase [Bacillus coahuilensis m4-4] Length = 274 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + + + + F+ A + I+DV RR K Sbjct: 1 MPELPEVETVRRTLKELIVGKKIIGVTVGWPKMIKKPEQVEQFTDALVDETIMDVHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+IE + S++ HL M G + + H HV ++T+ + Y D Sbjct: 61 FLIIET-SHYSLVSHLRMEGKYGVFEEKEELLP----HTHVIFHFDDDTS-----LRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y PL LGPEP F+ YL + K +K LL+Q IV Sbjct: 111 VRKFGTMHLYTKGQEYLDKPLSELGPEPFSKEFHFNYLFEKLQKTERAIKAVLLDQTIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L++A + P RK++++ +L +EI L A++AGGS++R Sbjct: 171 GLGNIYVDEVLFKAGIDPERKSKTITLQET------EQLTREIVSTLTIAVEAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G +G +QN VYG+ E C CG I + V AGR T YC CQ Sbjct: 225 YINSQGKVGTYQNQLFVYGRKDEAC-RVCGSPIYKKVTAGRGTHYCANCQ 273 >gi|292490686|ref|YP_003526125.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] gi|291579281|gb|ADE13738.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] Length = 271 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + V + + LR+ P S G+ + V RR KYL Sbjct: 1 MPELPEVETVRCGIEPHLVGCQVRTVIVREPRLRWPVPLSLSENLTGQSFLTVQRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSGS + ++ +H+H+ I L+N + +NDPR Sbjct: 61 LL-NCPRGTVLLHLGMSGSLRLVPSNLP----PKKHDHLDIVLSNGRC-----LRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +++P L+TLGPEP D F+ YL + + + +K ++N ++V GI Sbjct: 111 RFGSVLW-TQENPWRHPLLKTLGPEPLDPLFDGPYLFKRSRHRQAPVKVFIMNPRVVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + +L + I+ VL AI AGG++LRD+V Sbjct: 170 GNIYASEALFQAGIHPRRAAGRISLAR------YQRLAEAIKTVLYQAIQAGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +YG+T PC CG I R+++YCT CQ Sbjct: 224 ASDGKPGYFSHQLQIYGRTAHPC-PTCGNPIHLDHIGQRASYYCTQCQ 270 >gi|332534465|ref|ZP_08410304.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] gi|332036118|gb|EGI72594.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] Length = 269 Score = 194 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++N VT + ++ ++R+ P G + + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVQNQVVTKVNIYNASMRWPVPDDVYQ-LEGLIVTSIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ S I+HLGMSG+ + S H+HV N + NDPR Sbjct: 60 LLH-CELGSTILHLGMSGNLRVVDKSEPLKK----HDHVEFIFGNGK-----ALRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L LGPEP + F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEV--HKLLSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC++ C + I RST +C+ CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCMT-CENELEEIRLGQRSTIFCSNCQK 269 >gi|331005604|ref|ZP_08328974.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] gi|330420577|gb|EGG94873.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] Length = 272 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + +K V+ + L LR+ KK++++ RR KYL Sbjct: 1 MPELPEVETTRQGITPHIKGKQVSAVILRHHQLRWPIDSQLVDYLTRKKLLNIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +++HLGMSGS I +T P K H+HV I + N + Y+DPR Sbjct: 61 LLE-FVHGHLLIHLGMSGSLRIINTKTDAPQK---HDHVDIIFSGNIG-----LRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + + +R LGPEP F YL K+ ++K +++ IV G+ Sbjct: 112 RFGSILW-TTEDPFNHKLIRKLGPEPLLEDFTGEYLFKASRKRKKDVKTFIMDSHIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P + L + ++ I+ VL +I GG++LRD+V Sbjct: 171 GNIYANESLFTSGIRPTKAAEKLTRKQCDLW------VENIKAVLQRSITQGGTTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GE C++ C +++ I QA R+T YC+ CQK Sbjct: 225 GGDGKPGYFAQQLNVYGRGGEACVT-CRHILKEIRQAQRTTVYCSRCQK 272 >gi|315303333|ref|ZP_07873959.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] gi|313628294|gb|EFR96801.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] Length = 273 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + +H ++ P F G+++ V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKINQVIVHVPKMIKNTPPDEFVHMLVGQEMEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMN----ETDEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLLFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGK GEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKIGEPCV-ICGTQIEKIKLNGRGTHFCPNCQK 273 >gi|258515628|ref|YP_003191850.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] gi|257779333|gb|ACV63227.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] Length = 275 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L + + T+ ++ +R F G+KI +SRR KY Sbjct: 1 MPELPEVETIKRTLEPKLTGQSFTEALIYLPTIIRIPGIEEFKKEIVGQKIKSISRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L NL++I HL M+G I H H H+ + L + + + D Sbjct: 61 LTINLSNNLALIFHLRMTGRLIYCHADEPIVK----HTHLILKLDSGN-----ELRFIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV L+ LGPEP D F +L + ++ + +K LL+Q +AG Sbjct: 112 RQFGRIWLVSVQKLNTVSGLKDLGPEPFDKKFTREFLKKELRRRRTRIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA++ P + +L + KL I++VL + I+ G++ RDY Sbjct: 172 LGNIYADEALHRARIHPEKLACNLTARETS------KLFITIREVLEEGINNRGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q +Y + G+PCL C I RI +GRS+++C CQK Sbjct: 226 VDGNGQAGSNQELLQIYNREGQPCLK-CKTTIVRIKISGRSSYFCPSCQK 274 >gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] Length = 287 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQIKQVKLPYPKVITGDSQAFVTGVLNATFHAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E + +H + L + + YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPLGA----QPYKHTEIIFELDDQR-----AIFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + L LGPEP D S Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMVLTTTDHETDEVQSLGKLGPEPTDVSLTLPYMIDIFSRSKKPVKSFLLDQNKIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANELSEIE------LATLRQNIISEMKMAIKNHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG+ + +I R T YC CQ Sbjct: 226 SNVFGEVGQFQNKLEAYGRVGQPCL-RCGEPLVKIKVGQRGTTYCPVCQ 273 >gi|90408782|ref|ZP_01216927.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] gi|90310126|gb|EAS38266.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] Length = 270 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T I + ++ LR++ P S K+++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLSKYILAKKITRIDIRQRQLRWEIPTDLSVHLVQKELLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++++HLGMSGS + + + +H+H + Y DPR Sbjct: 61 LL-NFNSGTLLIHLGMSGSLRVCNLNTP----PEKHDHADFIFD------SCLLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + S Y + L LG EP F+ YL H ++ +K +++QK+V G+ Sbjct: 110 RFGAILWL-GSDPYAHKLLSHLGVEPLTEQFSGEYLHHLSKRRKLPVKQFIMDQKVVTGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + L P R + +L+ EI+KVLI AI+ GG++L+D+V Sbjct: 169 GNIYATEALFLSALRPTRSASQISLAR------YQRLVLEIKKVLILAIEQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ +YGK G PC +C + + I AGR++ +C +CQ Sbjct: 223 GGDGKPGYFQQTLHIYGKAGAPC-PSCQKPLDAIKLAGRNSVFCAHCQ 269 >gi|226310993|ref|YP_002770887.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|254789429|sp|C0Z7Z0|FPG_BREBN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226093941|dbj|BAH42383.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 276 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 142/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L ++ T+ + +H + D F + G+ I D+ RRAK Sbjct: 1 MPELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ L ++ HL M G + + +H HV T+ T + Y D Sbjct: 61 FIQFFLNE-DVLVSHLRMEGRYGVYQADDP----VEKHTHVVFHFTDGT-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL + PL LG EP D SF L +++ +K LLNQ+ + Sbjct: 111 VRQFGTMDLFPKGKETTIGPLAKLGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L++A + P + L + +L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDESLFKAGIHPEKPAGKLTDKE------VIRLHESIVSTLQEAVEQGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ + VYG+ E C + CG I R V GR T C CQK Sbjct: 225 YVNGQGEMGMFQQSLLVYGRKDEAC-TKCGAEIIRFVVGGRGTHICPDCQK 274 >gi|294138884|ref|YP_003554862.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] gi|293325353|dbj|BAJ00084.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] Length = 271 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLVGQQVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + + +H+H+ + L + + +NDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRIV----PRSTQVEKHDHIDLELASGKI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLSKLGPEPLKDNFTPKYLFDSLRNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L L L+ +++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRLDIER------LTILVTQVKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ G+ C + CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGDTC-TQCGNLLSEIKLGQRATVFCGICQ 269 >gi|170719527|ref|YP_001747215.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] gi|229541079|sp|B1J2M4|FPG_PSEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169757530|gb|ACA70846.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] Length = 270 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVQLGLP----AAKHEHVDIELESG-----LMLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPLNHELLLRLGPEPLTDLFDGERLFQLSRGRTMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRTRYL------KLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG +R R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGMPC-KLCGTTLREAKLGQRASVYCPRCQR 270 >gi|307262493|ref|ZP_07544138.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867870|gb|EFM99701.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 273 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGT-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|306827856|ref|ZP_07461125.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] gi|304429965|gb|EFM33005.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] Length = 275 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLLAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|253752113|ref|YP_003025254.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|253753938|ref|YP_003027079.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|253755187|ref|YP_003028327.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251816402|emb|CAZ52033.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|251817651|emb|CAZ55399.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251820184|emb|CAR46549.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|319758489|gb|ADV70431.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14] Length = 275 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L + +I HL M G + A + +H H + + + ++Y D R Sbjct: 61 LIYLTDH-VLISHLRMEGKYNFF----ADQVPANKHFHAFFTFIDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L + + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQLSTDQ------VADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|190571281|ref|YP_001975639.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018676|ref|ZP_03334484.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238066647|sp|B3CM71|FPG_WOLPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190357553|emb|CAQ54990.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995627|gb|EEB56267.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 271 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L +KN ++++ ++ NLR + +GK I D+ RR KY+ Sbjct: 1 MPELPEVEVISNFLFDKIKNKKISNVTVNNWNLRVPITKNIDDLLKGKVINDIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++++I+HLGMSG I + A+ H+HV ++NT+ +I+NDPR Sbjct: 61 ISNIDASMAVIIHLGMSGKLIYVEDNQAQNK----HDHVIFLFSDNTS-----LIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + LG EP + F+ YL + +N+K+ L+N K++ G+ Sbjct: 112 RFGLVIVLNREQELN--FFNNLGIEPLTDEFDGHYLQKLLKNRKANIKSVLMNNKLIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R + L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRLAQDLTYIE------CEKLAIEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-RICNNIITLIRQNGRSTYFCNACQ 270 >gi|21909883|ref|NP_664151.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28896419|ref|NP_802769.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] gi|25090293|sp|Q8K8D0|FPG_STRP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21904070|gb|AAM78954.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28811670|dbj|BAC64602.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] Length = 275 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDEVPDNK----HFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|126172330|ref|YP_001048479.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|153002820|ref|YP_001368501.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] gi|166198748|sp|A3CYP7|FPG_SHEB5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198749|sp|A6WUE9|FPG_SHEB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|125995535|gb|ABN59610.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|151367438|gb|ABS10438.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] Length = 271 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|163748879|ref|ZP_02156131.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] gi|161331653|gb|EDQ02458.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] Length = 271 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPHLVGQEVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + I+HLGMSGS I S +H+H+ + L + + +NDPR Sbjct: 60 LIDTDA-GTTIIHLGMSGSLRIVPKSTP----VEKHDHIDLELASGKI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWSELPEE-AHPLLSKLGPEPLKDDFTPKYLFDSLKNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L L L+ +I+++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRLDIER------LTILVTDIKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ + R+T +C CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEVRLGQRATVFCGICQQ 270 >gi|127514618|ref|YP_001095815.1| formamidopyrimidine-DNA glycosylase [Shewanella loihica PV-4] gi|166198750|sp|A3QJA8|FPG_SHELP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126639913|gb|ABO25556.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella loihica PV-4] Length = 271 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I + RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLLDQQVTGLTVRNASLRWPVP-EVAQQIVGQTIRGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + + IVHLGMSGS I S +H+H+ + L + + +NDPR Sbjct: 60 LLDTDA-GTTIVHLGMSGSLRILPKSTP----VEKHDHIDLELASGK-----VLRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EAAHPLLAKLGPEPLQSGFNVDYLAKALEGKKKAVKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRIDRERLTV------LVAEVKQILAQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|165977434|ref|YP_001653027.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250371|ref|ZP_07336570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253680|ref|ZP_07535547.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|238687532|sp|B0BU16|FPG_ACTPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|165877535|gb|ABY70583.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650841|gb|EFL80998.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858916|gb|EFM90962.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 273 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGT-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|229593163|ref|YP_002875282.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] gi|259647147|sp|C3K3N6|FPG_PSEFS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229365029|emb|CAY53194.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] Length = 270 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVEVGLP----AAKHEHVDIELESG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SQDPHNHELLLRLGPEPLTELFDGDRLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRGRYL------KLAIEIKRVLAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQR 270 >gi|317129904|ref|YP_004096186.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] gi|315474852|gb|ADU31455.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] Length = 278 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ N T+ D+ + + + F G+ D+ RR K Sbjct: 1 MPELPEVETVKRTLKKLILNETIKDVRVSWPKIIKEPDDIDEFRLKLIGQTFHDIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ L + ++I HL M G + I ++ + +H HV L +N + Y D Sbjct: 61 FLVF-LLDDYALISHLRMEGRYGIF----SEDEEPDKHTHVRFILESNK-----ELRYRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y + PL LG EP N F L H +K N+K LL+Q V Sbjct: 111 VRKFGTMHLFPKGEEYNHLPLIQLGVEPFSNEFTPERLYHLLNKTTRNIKATLLDQTYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P + L N+ + KL + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRANIHPEVASNELNTND------VKKLHKSIVDTLEEAVNMGGSSIKT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ G C CG I + V +GR T C CQK Sbjct: 225 YVNGQGEMGMFQQTLYVYGRKGMEC-KVCGDEIVKNVVSGRGTHTCPSCQK 274 >gi|253999709|ref|YP_003051772.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] gi|253986388|gb|ACT51245.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] Length = 272 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTMRGLAP-LVGQPVAKVVIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++HLGMSG + A+ +H+H + + + DPR Sbjct: 60 LAQFDT-GYLMLHLGMSGRICL----LAQDEPAAKHDHFDLHFADGQ-----VLRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+ L LGPEP +++F+ +L QF +++ +KNA+++ +V G+ Sbjct: 110 RFGAVLW-AGAEPEQHALLSVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L + +L EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPQTPANQLSR------QACDRLAAEIKATLTDALAAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYFQ + Y +TGE C C I+ + RSTF+C CQ Sbjct: 223 GADGNPGYFQQEYFTYARTGEAC-KICSTPIQNVRLGQRSTFFCPRCQ 269 >gi|289434844|ref|YP_003464716.1| hypothetical protein lse_1479 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171088|emb|CBH27630.1| fpg [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 273 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRLMN----ETDEVSKHTHIIFHFEDHT-----ELRFLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + + + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLVFEATKNIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGKTGEPC+ C I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKTGEPCV-ICRTQIEKIKLNGRGTHFCPNCQK 273 >gi|303258441|ref|ZP_07344444.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|330999757|ref|ZP_08323465.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] gi|302858887|gb|EFL81975.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|329573919|gb|EGG55499.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] Length = 275 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R ++ + T + R P + S +G+ + + RR KYL Sbjct: 1 MPELPEVEITRLGILKRVGGRRCTGAVVRETRFRKAAPANLSELLKGQCLRSIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + I+ HLGMSG + +P+K H+H+ I + V Y+DPR Sbjct: 61 IW-SFDRGYIVSHLGMSGVMRVVDPKATEPVK---HDHIDILFGD------LAVRYHDPR 110 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFGF+ + S + P + LG EP + F A L + +K ALL K V G Sbjct: 111 RFGFLIWLPESQDPHDLPEIAKLGEEPFSDGFTADRLHSALANTSLPIKEALLTGKYVVG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A +SP+ L L +L+ I++VL ++ GGS+L+D+ Sbjct: 171 VGNIYCSESLFEACISPLTPANKLSTKR------LERLVAAIRQVLTLSLQEGGSTLKDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G GYF VYGK G+PC S CG+ I++IVQ R+T++C++CQ+ Sbjct: 225 VSAEGEQGYFTLNAKVYGKAGKPC-SCCGRPIKKIVQNKRATYFCSHCQR 273 >gi|254426970|ref|ZP_05040677.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] gi|196193139|gb|EDX88098.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] Length = 269 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +T + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHVQGRILTSVTVREPRLRWPVSEALYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + +++HLGMSG+ + + H+HV + L + + +NDPR Sbjct: 60 LIEL-EHGQVLIHLGMSGTLRVVDATLPLRK----HDHVDLLLDSGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + L++LGPEP +FN + + + +K+ +++ V G+ Sbjct: 110 RFGTVLF--QAGEEPHSLLQSLGPEPLSEAFNGERMFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + L + I+ VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAAGRISLAR------YQALAEAIKVVLARAIEAGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PCL C +++ RST YC CQ+ Sbjct: 222 RADGQPGYFAQSLNVYGRAGQPCL-QCEAILKADRHGQRSTAYCPQCQR 269 >gi|50083930|ref|YP_045440.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] gi|81695930|sp|Q6FE90|FPG_ACIAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49529906|emb|CAG67618.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] Length = 272 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ N V + + LR+ P S G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLL-NQRVKSVQVRDSRLRWPIPEDIS-RLAGQRLTSLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + + HLGMSGSF + + + +H+H+ ++ + T + Y+DPR Sbjct: 59 LAEFETDQML-WHLGMSGSFRVATAAD----ELRKHDHLILTFDDGT-----ELRYHDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q L LGPEP FNA YL + K +K AL++ +V G+ Sbjct: 109 RFGCILWLN--EESQSKLLNPLGPEPLSEDFNADYLYQKLKSKQVGIKIALMDNHVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + SL K + L+QEI+++L AI+ GGS+LRDY Sbjct: 167 GNIYATESLFNLGIHPAQPASSLS------KPQILALVQEIKRILKFAIELGGSTLRDYT 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 221 NAMGENGYFQQTLLAYGRAGEMCV-NCETPLENLKLGQRASVFCPQCQ 267 >gi|157964829|ref|YP_001499653.1| formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] gi|166988463|sp|A8F2H0|FPG_RICM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157844605|gb|ABV85106.1| Formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] Length = 279 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + V ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIVENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L Q LG EP + YL + + +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEQEFFND-LGIEPFSDLLTLEYLKDKLQTRKRPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGSDLRDDE------IENLIKSIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYGK G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGKEGQSCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|325126151|gb|ADY85481.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 273 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|302865862|ref|YP_003834499.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315502407|ref|YP_004081294.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] gi|302568721|gb|ADL44923.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315409026|gb|ADU07143.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] Length = 285 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + + +R P HF+ G+ + V RR Sbjct: 1 MPELPEVETVRVGLAQWVIGRRIAAVEVRHPRAVRRHAPGGAHFADVLAGRTVTGVQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ A + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPVGAADEL----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + + +P D F+ +K + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGAELPAE-IAHIARDPMDPEFSDEAFVAALRRKRTEIKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R + + +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRAKLHGTRPA------DALTRPAALRLLGHVRDVLAEAIKQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + YV+++G GYF + + YG+ GEPC CG IRR RS++ C CQ Sbjct: 226 ELYVNVNGESGYFDRSLNAYGREGEPC-PRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|255020678|ref|ZP_05292740.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254969914|gb|EET27414.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 270 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L ++ T+T + +K LR P + RG+ + + RR KYL Sbjct: 1 MPELPEVEVTRLALAPHLEGQTLTGAVVRQKKLRQWVPPDLDSRLRGRVLNRLDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++HLGMSGS + A + H+HV I L + + + DPR Sbjct: 61 LAD-FVHGQLLLHLGMSGSLRLLPQDMAATV----HDHVDILLGDGRC-----LRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P LR LGPEP +F+ L + + +K+ L++ V G+ Sbjct: 111 RFGLILWNTEG--AAHPLLRDLGPEPLAENFSGQVLYRRSRGRQQAVKSFLMDSHTVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R + ++ + + L +AI GG++LRD+ Sbjct: 169 GNIYATESLFRAGIDPRRAAGRISAARYDDLAMVIRTV------LREAIAQGGTTLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ + YG+ GEPC+ CG +R GR+T +C YCQ Sbjct: 223 QPDGGNGYFRLSLQAYGREGEPCI-RCGGTLRGQRLGGRATVFCPYCQ 269 >gi|21730465|pdb|1KFV|A Chain A, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna. gi|21730466|pdb|1KFV|B Chain B, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna Length = 271 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 99/287 (34%), Positives = 138/287 (48%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRXVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL G + + + H+H+T + +IY D R+F Sbjct: 62 EIGDDFRLISHLRXEGKYRLATLDAPREK----HDHLTXKFADGQ------LIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI++ ++ L I ++L AI GGSS+R Y Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY-SA 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 LGSTGKXQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|46143899|ref|ZP_00133897.2| COG0266: Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209444|ref|YP_001054669.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae L20] gi|166215606|sp|A3N3S8|FPG_ACTP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126098236|gb|ABN75064.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 273 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDEL-QHMQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + + YNDPR Sbjct: 60 ILHT-TQGDILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDG-----MVLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFG--CWLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A+L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAELHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|239947088|ref|ZP_04698841.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921364|gb|EER21388.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] Length = 273 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 160/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSSLLATEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSANY----KTQKHDHVIFDLNN-----CEKLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL ++ + +KN +++ KI+ G+ Sbjct: 112 RFGMVYSFKTNFLEKEFFND-LGIEPLSDSLTLEYLKNKLKIRKIPIKNLIMDNKIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L + + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKLGNDLNDDE------IESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFIQQLTVYGREGQNCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|330466267|ref|YP_004404010.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] gi|328809238|gb|AEB43410.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] Length = 285 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 147/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + +R HF+ G+ ++DV RR Sbjct: 1 MPELPEVETVRQGLARWVTGRRIESVEVRHPRAVRRHVAGGAHFADVLAGRTVLDVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ + + H V T++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPATAPEEP----HLRVRFRFTDD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGATLPAE-IAHIARDPLDPQFSDADFVTAMRRRRTEVKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA L R T +L + +L+ ++ VL +AI AGG+S Sbjct: 172 SGVGNIYADEALWRAGLHGTRPTDALTG------PAVRRLLGHVRDVLTEAITAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + +VYG+ G+PC CG IRR RS++ C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLNVYGREGQPC-RRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|153871079|ref|ZP_02000340.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] gi|152072453|gb|EDN69658.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] Length = 272 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + K LR+ P + +KI + RR KYL Sbjct: 1 MPELPEVETIRRGIATYTVGKKIKIAIVREKRLRWAVPDILTTILPNQKIQKIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E N I++HLGMSGS + + +H+H+ I T++ + + Y+DPR Sbjct: 61 LLE-CSNGHILIHLGMSGSLWVLPSDTPL----KKHDHIDIVFTDD-----FCLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + + +P L LG EP +F YL H K+ +KN +++ IV GI Sbjct: 111 RFG-CMLWTSEPVFDHPLLVKLGIEPLSATFTGKYLHHHAKKRRIVVKNYIMDSHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ L ++I++VL AI+ GG++LR++ Sbjct: 170 GNIYANEALFLAGIHPTCAAGSISLKRYQH------LAKKIKEVLHKAIEMGGTTLRNFS 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYF+ + VYG+ G C+ C I R+T+YC CQ Sbjct: 224 DSTGKPGYFKQSLCVYGRAGLACV-QCHNTIIVKKIGQRATYYCPMCQ 270 >gi|304411995|ref|ZP_07393605.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|307305890|ref|ZP_07585636.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] gi|304349545|gb|EFM13953.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|306911383|gb|EFN41809.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] Length = 271 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQDIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|119717504|ref|YP_924469.1| formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|166215641|sp|A1SLU7|FPG_NOCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119538165|gb|ABL82782.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardioides sp. JS614] Length = 295 Score = 192 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + +R D P F+AA G++I RR Sbjct: 1 MPELPEVEVVRAGLERHVLGATIARVDVLHPRPVRRDLRGPAGFAAALTGRRIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ P H+ + L + + + Sbjct: 61 KYLWLPLDNGDALLGHLGMSGQLLVQPPDA------PDERHLRVRLALEGADEGRELRFV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG V P + + +P D F+ + ++ S +K LL+Q ++ Sbjct: 115 DQRMFGG-LSVSAGGADLPPEIAHIARDPLDPEFDDDDFVRRVRRRTSGVKRQLLDQNLI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R L + +L+ ++V++ A+ GG+S Sbjct: 174 SGVGNIYADEALWRARIHGERPGDRLTATR------VRELLAHAREVMLAALGEGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GE C CG IRR+ RS+++C CQ Sbjct: 228 ALYVNVNGESGYFDRSLHAYGREGEAC-ERCGTPIRRVAFMNRSSYFCPVCQ 278 >gi|152977704|ref|YP_001343333.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] gi|171472905|sp|A6VKA1|FPG_ACTSZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150839427|gb|ABR73398.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] Length = 270 Score = 192 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 142/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + + I + + LR++ S +K+ +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLDGFYIEKIIVRQPKLRWEVSPELSQ-ISHQKVTALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I H+H+ I + N + YNDPR Sbjct: 60 IIHT-AQGYIIGHLGMSGAVRIVSPDSPVNK----HDHLDIVMNNGKI-----MRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP FN+ YL + KK + +K+ ++N +V GI Sbjct: 110 RFGAWFWTE--NLDEFPLFAKLGPEPLSGEFNSDYLFKKSRKKPTAVKSFIMNNAVVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L++ L P + + K L + I+K L AI GG++L+D++ Sbjct: 168 GNIYANEVLFQCGLHPEKPAGKIT------KTQAALLTETIKKELTRAIAQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC CGQ I R+++ C +CQK Sbjct: 222 QPDGKPGYFVQELQIYGKKGCPC-PKCGQKIESFTVGQRNSYVCLHCQK 269 >gi|320539888|ref|ZP_08039547.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] gi|320030074|gb|EFW12094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] Length = 271 Score = 192 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 143/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAIVRNARLRWPVSEQILT-LSAQPVHSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL + IIVHLGMSGS + +H+H+ + ++N + Y DPR Sbjct: 60 LIEL-EHGWIIVHLGMSGSLRMLRKEN--QDAAGKHDHIDLVISNG-----MILRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +FN YL + K LK L++ K+V G+ Sbjct: 112 RFGAWLWCE--DLAASNVLVHLGPEPLSEAFNGTYLYKKSRNKRMRLKPWLMDNKLVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R+ S K L I++VL +I+ GG++LRD++ Sbjct: 170 GNIYASESLFSAGILPDRQADS------LNKTEADLLAATIKEVLQRSIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C +CQ+ Sbjct: 224 QSDGKPGYFAQELQVYGRAGEPC-RACGLPIESTKHGQRSTFFCCHCQR 271 >gi|271969196|ref|YP_003343392.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] gi|270512371|gb|ACZ90649.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] Length = 288 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 16/292 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + +R P FS+ +G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRVIAHAEVLHPRAIRRHVPGAEEFSSRLKGRTIGSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G+ +I+ HLGMSG ++ A +H V I T+ ++ Sbjct: 61 KYLWLPLDGSDAILAHLGMSGQLLVVEPGSA----PERHLRVRIGFTDGGPDLRFVDQRT 116 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + + + P+ + +P + F+ + + + +K ALL+Q ++ Sbjct: 117 FGHVL-VTAMAHSGGRPVPEPITHIAADPFEEHFDEDLFGRRLRARQTEVKRALLDQSLI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R T +L + + +L+ ++V+ A+ GG+S Sbjct: 176 SGVGNIYADEALWRARLHGARPTGALTR------PKIAELLGAAREVMAAALSEGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + +VYG+ EPC CG I R RS++ C CQ Sbjct: 230 SLYVNVNGESGYFDRSLAVYGRRDEPC-PRCGAPIIRESFMNRSSYSCPRCQ 280 >gi|78212042|ref|YP_380821.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9605] gi|78196501|gb|ABB34266.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9605] Length = 278 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 136/293 (46%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRPRAIASPGGPDEFVAGLCGTTVGQWHRRGK 60 Query: 59 YLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE VHL M+G F +P + +H V + N+K+ + + Sbjct: 61 YLMTALEPESGVWGVHLRMTGQFQWH----EQPSEPCKHTRVRLW-----NSKEEELRFV 111 Query: 118 DPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSADFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG GNIY E+L+ + ++P L +L + VL +I AGG++ Sbjct: 172 LVAGAGNIYADESLFASGIAPFTPAGQ------LNLQQLERLRDALVNVLTISIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + GEPC NCG I+R +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGEPC-RNCGTTIQREKLSGRSTHWCPTCQ 277 >gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc fallax KCTC 3537] Length = 275 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 133/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ + +I + + F T + + RR KYL Sbjct: 1 MPELPEVETVRSGLEKLIVGGEIANIRVPYPKVIMGDAPAFIQGTLASQFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +I+ HL M G + +E H + L + + YND R Sbjct: 61 FLRLSNQRTIVSHLRMEGQYSVEPLDAPLHK----HTEIVFELADGR-----ALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L ET L+ P L LGPEP + Y+ F K +K+ LL+Q +AG Sbjct: 112 RFGRMTLAETGLEQIAVPTLAKLGPEPITTDLHLEYMIQIFAKSKKPVKSFLLDQTKIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANELDPSQ------LAILRDSIISEIALAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN VYG++G PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNQLEVYGRSGLPCL-RCGTPLVKIRVGQRGTTFCPKCQ 273 >gi|229823044|ref|ZP_04449113.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] gi|229787483|gb|EEP23597.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] Length = 292 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPELPEVE +RR L +++ + ++ + L P + RG+ I V RR Sbjct: 1 MPELPEVETVRRGLTSLIEGKIIAEVQVFWPKLIDLRPQETLAQWQDYLRGQTIQAVGRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL ++ ++ HL M G + K P+H H+ ++ + ++ Y Sbjct: 61 GKYLWLDFGPQ-VLVFHLRMEGKCHVYPPGQEPKTK-PKHVHLIMTFKDGSH-----FYY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG + Y + LGPEP +F+ + Q LK LL+Q + Sbjct: 114 EDVRKFGRFSYMAKDQLESYFASKKLGPEPTQEAFDLAHFRAQLASSKRALKPLLLDQTL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E ++A++ P R L + + +L I ++L A+ AGGS++ Sbjct: 174 VAGLGNIYVDEVCFKAQIHPARPACDLTVHE------VKRLHAAIIEILAAAVQAGGSTI 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R Y + G+ G +Q + +VYG+ EPC CG++I ++ GR T +C +CQ Sbjct: 228 RTYRNSLGAAGTYQESLAVYGRVDEPC-ERCGRLIHKVQLGGRGTHFCPHCQ 278 >gi|90415302|ref|ZP_01223236.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] gi|90332625|gb|EAS47795.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] Length = 268 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 153/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + ++ +LR+ S T+G+ ++ ++RRAKYL Sbjct: 1 MPELPEVETTLRGVAPHIVDQVIDQLRVYNGSLRWPVTQGISELTQGQLVVAITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL ++++HLGMSGS + S + H+H+ + + N + Y+DPR Sbjct: 61 LVEL-ERGTMMIHLGMSGSLRLVDRSEPRRK----HDHIEMLMANGAC-----LRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YP L LGPEP + F L K+ +K +++ + V G+ Sbjct: 111 RFGAWLWSDSG----YPQLDHLGPEPLTDDFTGKRLFELSRKRKMAIKPFIMDNRTVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+R + P R + +L I++VL AI GG++LRD+V Sbjct: 167 GNIYASEALFRGGIRPDRAAGRVS------LQRYEELAGHIKEVLASAITQGGTTLRDFV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ VYG+ GEPC+ C + ++ I RS+ +C CQ+ Sbjct: 221 NGNGEPGYFQQTLMVYGRGGEPCVH-CDKPLKDIRLGQRSSVFCPACQR 268 >gi|330812395|ref|YP_004356857.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380503|gb|AEA71853.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 146/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVEVGMP----AAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPFNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRARYL------KLAIEIKRILAHAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGELC-KVCGTGLREIRLGQRASVWCPRCQ 269 >gi|312963651|ref|ZP_07778132.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] gi|311282160|gb|EFQ60760.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] Length = 270 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + T +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVETGMP----AAKHEHVDIELESG-----LSLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SQDPHNHELLIRLGPEPLTDLFDGERLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRGRYL------KLAVEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQ 269 >gi|149908605|ref|ZP_01897267.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] gi|149808439|gb|EDM68376.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] Length = 270 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++N +T I + LR+ P A G + V RRAKYL Sbjct: 1 MPELPEVEVSRQGIAPYLENAQITQIIVRNGQLRWPVPMALQDA-VGCTVTSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +II+HLGMSGS + +S A +H+HV I L + + NDPR Sbjct: 60 LLET-EKGTIIIHLGMSGSLRVLDSSVA----VEKHDHVDIVLNSGKC-----LRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ L +LGPEP + F A L + + +K+ L++ IV G+ Sbjct: 110 RFGSVLW-QVGDVLEHKLLASLGPEPLTDDFTAQRLFDRSRSRKVPVKSFLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A ++P R ++ L++E++ VL AI GG++L+D+ Sbjct: 169 GNIYANEALFSAGINPKRAAGNVSLQRYKV------LVEEVKLVLAKAIAQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+PC CG+ ++ + R+T YC CQ+ Sbjct: 223 QTDGKPGYFVQELQVYGKAGKPC-PKCGEELKAMKIGQRNTIYCNQCQR 270 >gi|116514451|ref|YP_813357.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274817|sp|Q049F3|FPG_LACDB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116093766|gb|ABJ58919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 273 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTVVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVDK----HEHLQFAFTDGSS-----LRYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|89894087|ref|YP_517574.1| hypothetical protein DSY1341 [Desulfitobacterium hafniense Y51] gi|219668498|ref|YP_002458933.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|122483280|sp|Q24XW2|FPG_DESHY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789434|sp|B8FU83|FPG_DESHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89333535|dbj|BAE83130.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538758|gb|ACL20497.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 273 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L + + +I + + F+ A RG K + RR KY Sbjct: 1 MPELPEVETIRRSLSQHILERRIEEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL LE S I H+ M+G + A+ + +H HV + L++ + + D Sbjct: 61 LLFTLEEGWSFIAHMRMTGRMVYH----AQSQEPEKHTHVVLKLSSG------EIHFTDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T + Q P L LGPEP + F+A L + + +K ALL+Q +VAG Sbjct: 111 RKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+RA ++P R SL + + KL I +VL + I A G+S RDY Sbjct: 171 IGNIYADEALFRAGIAPERCANSLTKEE------IEKLYPAICQVLEEGIAANGTSFRDY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G FQ VYG+ GEPC CG + RI AGRST +C CQ Sbjct: 225 QDANGERGDFQKELKVYGRGGEPC-KECGHTLVRIRLAGRSTVFCPCCQ 272 >gi|58696959|ref|ZP_00372449.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225630828|ref|YP_002727619.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] gi|254789456|sp|C0R4I6|FPG_WOLWR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58536803|gb|EAL60033.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225592809|gb|ACN95828.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] Length = 271 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I A+ H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSMAVIIHLGMSGKLIYAEHDQAQNK----HDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + G EP + F+ YL K +N+K+AL++ K++ G+ Sbjct: 112 RFGLVIVLNKEQEIN--FFDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|160877565|ref|YP_001556881.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217975407|ref|YP_002360158.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|189044676|sp|A9KW47|FPG_SHEB9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789451|sp|B8EDQ9|FPG_SHEB2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160863087|gb|ABX51621.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217500542|gb|ACK48735.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|315269763|gb|ADT96616.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS678] Length = 271 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDA-GTSIVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVTQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDIERLTV------LVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VY + GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYSRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|91791579|ref|YP_561230.1| formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] gi|123166575|sp|Q12SR9|FPG_SHEDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91713581|gb|ABE53507.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] Length = 271 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV ++ + +LR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVDQTVVELIVRNASLRWPVP-DLAHNIVGQTILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E IVHLGMSGS I + +H+H+ + L N + +NDPR Sbjct: 60 LIDTEA-GITIVHLGMSGSLRI----LPRNTPVEKHDHIDLVLANGR-----MLRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN + L K +K L++ IV G+ Sbjct: 110 RFGAWLWYELPEE-AHPLLAKLGPEPLSEAFNPLQLLTALKGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPESEAGK------IDIEKLTLLVVEVKQILAQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ + C CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGSKSCTH-CGNLLSEIRLGQRTTVFCGLCQ 269 >gi|90101295|sp|Q6ML45|FPG_BDEBA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + L RK+LR P + G+ + + RRAKY Sbjct: 1 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + + H+H+ + + + R+ Y DP Sbjct: 61 LLL-WTPKGAMLSHLGMTGTWRVAVPGDERL-----HDHIYLHFSGD-----LRLAYRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ ++P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 110 RRFGCFDFVQ--DPLKHPKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 168 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 222 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 270 >gi|42523639|ref|NP_969019.1| hypothetical protein Bd2176 [Bdellovibrio bacteriovorus HD100] gi|39575845|emb|CAE80012.1| fpg [Bdellovibrio bacteriovorus HD100] Length = 271 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + L RK+LR P + G+ + + RRAKY Sbjct: 2 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + + H+H+ + + + R+ Y DP Sbjct: 62 LLL-WTPKGAMLSHLGMTGTWRVAVPGDERL-----HDHIYLHFSGD-----LRLAYRDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ ++P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 111 RRFGCFDFVQ--DPLKHPKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 169 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 223 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 271 >gi|116490733|ref|YP_810277.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290890153|ref|ZP_06553235.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] gi|116091458|gb|ABJ56612.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290480197|gb|EFD88839.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] Length = 274 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +N + D+ + L F G + + RR K+L Sbjct: 1 MPELPEVETVRRGLKKYFENEKIKDLKIIYPKLLDSDRTEFIEKVVGSTVSRIDRRGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ NL+I+ HL M G + +E A +H + L N +V Y+D R Sbjct: 61 LFRLDNNLTIVSHLRMEGRYSVE----AAQEAPHKHTEMIFELENGK-----QVFYDDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M LV++ + + + ++GPEP ++ Y ++ K +K LL+Q VAG Sbjct: 112 KFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKALLLDQNNVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW +++SP+R T + + L + I + L AI+ GGS++ + Sbjct: 172 IGNIYADEVLWLSEISPLRPTNEISEEEAD------NLRENIIRELAFAIENGGSTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ YG+ G+PC + G++I +I A R T YC CQK Sbjct: 226 IDASGHTGRMQDKLHAYGRAGQPCERDGGELI-KIRVAQRGTTYCPKCQK 274 >gi|262377505|ref|ZP_06070727.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] gi|262307561|gb|EEY88702.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] Length = 286 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V + + + +LR+ P + G+K++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLE-QRVKRVEVRQSSLRWPIPENIEK-LVGQKLLKLTRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +++ HLGMSGSF + C + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEHDTMLWHLGMSGSFRL----CESNEELRKHDHLIIQFED------IELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP +FNA YL + KN K A+++ IV G+ Sbjct: 108 RFGCILWL--DAQSQSKLIDTLGPEPLSENFNAKYLFEKLKNKNVGTKVAIMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNLGIHPAQPASTLSLVQ------IEKLVLEIKRILKQAIDLGGSTLRDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|296134842|ref|YP_003642084.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] gi|295794964|gb|ADG29754.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] Length = 291 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 108/296 (36%), Positives = 145/296 (48%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L + +T + L + LR+ G +I + RR KYL Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLGKP-LRWPLNID-PQTLVGLRIKALERRGKYL 58 Query: 61 LIE-------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ +IVHLGMSGS + +P H HV T + Sbjct: 59 LLRLSQTAASPNTAGVLIVHLGMSGSLRWTPAAQVPAPLSP-HEHVEW------LTDRGV 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + ++P LR LGPEP F L + + +K LL+ Sbjct: 112 LRLRDPRRFGAVLWHAGEEVQRHPLLRVLGPEPLGADFKGATLCRALAGRKAAIKPLLLS 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAGIGNIY CEAL+RA++ P +L +++ L A+ GG Sbjct: 172 QHIVAGIGNIYACEALFRARIDPRTPAS------HLRPVHCDRLAAAVRETLQQAVALGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C CQK Sbjct: 226 SSLRDFAHSDGELGYFQMQALVYGRVGQPC-RVCATPIRQIVQGQRSTYFCPKCQK 280 >gi|58584846|ref|YP_198419.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497735|sp|Q5GS47|FPG_WOLTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58419162|gb|AAW71177.1| Formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 271 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEII L +KN ++ + ++ NLR + +GK I ++ RR KY+ Sbjct: 1 MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++ + VHLGMSG I A+ H+HV S ++NT+ +I+NDPR Sbjct: 61 IWHIDNDIVVTVHLGMSGKLIYAKGEQAQNK----HDHVIFSFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ + G EP + FN YL K N+K+AL+N K++ GI Sbjct: 112 KFGLVIILNKEQEVN--FFNDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R + L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRSAQDLTYKE------CEKLATEIKNTLSDAIIAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+GYFQN+F VYGK +PC C I I Q GRST++C CQ Sbjct: 224 QPSGSVGYFQNSFYVYGKVQKPC-KICNNTITLIRQNGRSTYFCNACQ 270 >gi|94676562|ref|YP_588638.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166215610|sp|Q1LTS6|FPG_BAUCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|94219712|gb|ABF13871.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 269 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR + + + + LR+ + +++I + RRAKYL Sbjct: 1 MPELPEVEIIRRGIEPWVVGHIIQRAEIRNNQLRWPIDQEIIS-IHQRRVISLKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L + II+H GMSG I A + +H+H+ + ++NN + Y DPR Sbjct: 60 LMQLH-HGWIIIHFGMSGRLRI----LAHMLPPEKHDHIDLIMSNN-----CILRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + L LG EP + F+ +L + K+ +K L+ K+V GI Sbjct: 110 RFGAWLW--SNNLDKMSILNNLGVEPLSDQFDGHWLFTKSRNKSLLIKQFLMTNKLVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + SL + L + I+ +L+ +I+ GG++LRD++ Sbjct: 168 GNIYANEALFAAGILPSRASCSLKEQEAL------LLARSIKAILLSSIEEGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G F VYG+ GEPC + CG+ I+ RS+F+C CQ Sbjct: 222 QSDGRDGLFAKKLQVYGRHGEPCYT-CGEFIQIAKYGQRSSFFCPSCQ 268 >gi|223932651|ref|ZP_03624650.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] gi|223898621|gb|EEF64983.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] Length = 297 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 17/287 (5%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYLL Sbjct: 24 PELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 I L + +I HL M G + + +H H + ++ + ++Y D R+ Sbjct: 84 IYLTDH-VLISHLRMEGKYNFF----PDQVPANKHFHAFFTFSDGST-----LVYQDVRK 133 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+G Sbjct: 134 FGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGLG 193 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y + Sbjct: 194 NIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYKN 247 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 248 ALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|310641224|ref|YP_003945982.1| formamidopyrimidine-DNA glycosylase (fapy-DNA glycosylase) [Paenibacillus polymyxa SC2] gi|309246174|gb|ADO55741.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa SC2] Length = 276 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++ + + + ++ + R D F+ G +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIDAFAMELAGHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L L ++ HL M G + + +H HV + T + Y D Sbjct: 61 FLRI-LLDGLVLVSHLRMEGRYGLYSQDDP----VEKHTHVIFHFKDGT-----ELRYQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQSYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV E+L++A + P + +SL + L + I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSLTDSQFRV------LHEAIVSTLGASIQVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 225 FVNGQGKTGDFQHQLQIYGRNAKPCM-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|83595877|gb|ABC25239.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium Ant4D3] Length = 270 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +M ++ + + + LR+ P +A GK + V RR KYL Sbjct: 1 MPELPEVETTRAGIMPHIQGQILQHVVVRDTRLRWPVPIDLAAKVEGKCLRQVVRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +II HLGM+GS I H+HV + + + Y DPR Sbjct: 61 LFE-FDHGAIIGHLGMTGSMRIVVHKEP----PAYHDHVDLVFSE------VTLRYRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++P L +LGPEP + F+ ++L K +K+ +++ K V G+ Sbjct: 110 RFGCVLWQDNP-VMEHPLLASLGPEPLSDEFDMVHLLQVCKGKKQAIKSVIMDAKQVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + L KL++ ++VL AI+ GG++LRD+V Sbjct: 169 GNIYANEALFMAGIHPHRQAGRISAAR------LGKLVESCKQVLCAAIEQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYF+ VYG+ G+ C+ NC Q + RST YC +CQ+ Sbjct: 223 DSEGKPGYFKQQLQVYGRAGQACV-NCDQALTESRIGQRSTVYCKHCQR 270 >gi|241661900|ref|YP_002980260.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] gi|240863927|gb|ACS61588.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] Length = 291 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 143/303 (47%), Gaps = 26/303 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLIPHITERRIVRVVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIELEGN------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LIE +++HLGM+G+ + T+ H+HV I L Sbjct: 61 LIECMPEAEQSGGCAETAGGWLLIHLGMTGTLRVLETAVP----PGLHDHVDIEL-AGAT 115 Query: 109 TKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + Y DPRRFG + ++P LR LG EP D F+ ++ + + Sbjct: 116 GVPVTLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL IV G+GNIY E+L+RA + P + L + I+ L Sbjct: 176 IKSALLAGDIVVGVGNIYCSESLFRAGIRPTTAAGR------IGRPRYAALAEAIRATLA 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DAI GGS+LRD+V DG GYFQ VY + G PC CG +R+IVQ RSTFYC Sbjct: 230 DAIARGGSTLRDFVGSDGQSGYFQLDAFVYDRAGLPC-RVCGTPVRQIVQGQRSTFYCPT 288 Query: 287 CQK 289 CQ+ Sbjct: 289 CQR 291 >gi|157804064|ref|YP_001492613.1| formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] gi|166198742|sp|A8EZP5|FPG_RICCK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157785327|gb|ABV73828.1| Formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] Length = 273 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + +I L R NLR++ + I++V RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIKNIELKRDNLRYNLSPLLTTEILNTNILNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ S+++HLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFGNYYSLVIHLGMSGRFTVQPANY----KIQKHDHVIFDLNN-----CEKLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP + YL + + +KN +++ KI+ G+ Sbjct: 112 RFGMVYSFKTNFLEE-KFFYNLGIEPLSDLLTLEYLKSKLITRTIAIKNLIMDNKIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E+L A++ P + R+L + + LI+ I++VL AI AGG++L+++V Sbjct: 171 GNLYASESLHLARIHPHKLGRNLKDDE------IENLIKSIREVLTKAITAGGTTLKNFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ C NC I + +GRSTFYC CQ Sbjct: 225 NGDSKPGYFTQQLRVYGREGQKCF-NCSSTILKTKNSGRSTFYCKTCQ 271 >gi|23099617|ref|NP_693083.1| formamidopyrimidine-DNA glycosylase [Oceanobacillus iheyensis HTE831] gi|29611715|sp|Q8EPE6|FPG_OCEIH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22777847|dbj|BAC14118.1| formamidopyrimidine-DNA glycosidase [Oceanobacillus iheyensis HTE831] Length = 280 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+ L + + N T+ I + N+ F A G+ I + R+ K Sbjct: 1 MPELPEVETIKETLKLFVCNKTIKHIDIEWPNMIKHPDDVEEFKALVTGQTIRSMGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ +I HL M G + + +H HVT +N + YND Sbjct: 61 FLLFYLDE-YVLISHLRMEGKYSVHSPGDP----VKKHTHVTFYFSNGE-----ELRYND 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + ++ + PL LGP+P D SFN Y + + + +K ALL+Q IV Sbjct: 111 VRKFGTMHVYPIGEEFMHKPLNQLGPDPFDTSFNLEYFYEKLKRTDRYIKTALLDQSIVT 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P+++ L + + KL ++ L DAI AGG+++R Sbjct: 171 GLGNIYVDETLFRANVHPLKRCSKLSKQE------VKKLQINAKETLRDAIKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ +PC CG I +I GR T C CQ Sbjct: 225 YVNTQGDMGMFQQDLYVYGQHSKPC-RVCGADIIKIKVGGRGTHLCPTCQ 273 >gi|119943846|ref|YP_941526.1| formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] gi|166198736|sp|A1SR12|FPG_PSYIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119862450|gb|ABM01927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] Length = 270 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + N +V ++ L LR+ P + + K ++ + RRAKYL Sbjct: 1 MPELPEVETSRKGISPHLINKSVQNVVLRHTQLRWKIPQDLLSDIKDKILLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++++HLGMSGS I C +H+H + + + Y DPR Sbjct: 61 LF-NFTSGTLLIHLGMSGSLRI----CPLNSPPKKHDHADLIFAD------CLLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + P L LGPEP ++ FNA YL Q K+ +K +++QK+V G+ Sbjct: 110 RFGAILWL-GLTPEDSPLLNKLGPEPLNDDFNAKYLYQQATKRKLPVKQFIMDQKVVTGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + +SPIR ++ + L+ EI+++L AI GG++L+D+V Sbjct: 169 GNIYATEALFNSGISPIRAAGNISEKRYQI------LVTEIKEILQQAIKQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYGKTG+ C +C ++ + A R++ YC CQ Sbjct: 223 GSDGKPGYFQQTLQVYGKTGQQC-PSCETPLKAVKLAARASVYCPECQ 269 >gi|318042468|ref|ZP_07974424.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0101] Length = 294 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 24/295 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L + + + + R P F +A G + RR KY Sbjct: 14 PELPEVETVRRGLEQQVSGFEIARVEVLRARAIASPPLPELFCSALEGCTVQQWLRRGKY 73 Query: 60 LLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+ L+ VHL M+G F+ +T + +H V I NT++ + Sbjct: 74 LMATLQRGGADAGHWGVHLRMTGQFLWMNTPA----EPCRHTRVRIW-----NTQEQELR 124 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + LR LGPEP F+A +L + ++K ALL+ Sbjct: 125 FVDLRSFGEMWWVPPGEPLESVMTGLRRLGPEPFSTDFSAEHLAAKLAGSTRSIKTALLD 184 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY E+L+ ++++P + L L +L + +VL +I AGG Sbjct: 185 QALVAGVGNIYADESLFMSRIAPQTPSGQLAPAQ------LKRLHSALVEVLEASIGAGG 238 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G+ G + NA VY ++GEPC CG I+R GRS+ +C CQ Sbjct: 239 TTFSDFRDLTGTNGNYGNAAWVYRRSGEPC-RVCGTPIQRDKLGGRSSHWCPNCQ 292 >gi|238063284|ref|ZP_04607993.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885095|gb|EEP73923.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 285 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + +R P HF+ G+ + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAGVEVRHPRAIRRHLAGPAHFADVLAGRTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +I+ HLGMSG +++ + A + H V ++ + + Sbjct: 61 KYLWLPLNSGDAIVGHLGMSGQLLLQPATAADEL----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG V P + + +P D F+ ++ + +K ALL+Q +V Sbjct: 113 DQRTFGG-LAVSAGGAELPPEIAHIARDPMDPGFSDGAFVAALLRRRTEVKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRAKL + T L +LI ++ VL +A+ GG+S Sbjct: 172 SGIGNIYADEALWRAKLHGAQPTDQLTA------PAAQRLIGHVRDVLGEAVKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A + YG+ GEPC CG +RR RS++ C CQ Sbjct: 226 ALYVNVNGESGYFDRALNAYGREGEPC-RRCGTPLRREAFMNRSSYSCPRCQ 276 >gi|322419618|ref|YP_004198841.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] gi|320126005|gb|ADW13565.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] Length = 270 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I V RR KYL Sbjct: 1 MPELPEVEVTRLGITSHLTGARIAALSVHSPKLRAMVPAGLAGLLAGETIRCVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + S+++HLGM+G + + A H+H + L + + ND R Sbjct: 61 IL-TCASGSLLLHLGMTGHLRLVPATSA----PGPHDHFDLRLESG-----LTLRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + Q+ L+ +GPEP +FNA L + L+ L++ +VAGI Sbjct: 111 RFGS-IHFTAADPLQHRLLKKIGPEPLTAAFNAEGLYRLSRNRKVALQRFLMDSAVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R +L P SL + T +L+ I++ L D+I A G S D+ Sbjct: 170 GNIYAAESLFRCRLFPETPAGSLTLADCT------RLVDAIKETLSDSI-AAGRSSMDFR 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + YF VYG+ GEPC CG IRR RSTF+C CQ+ Sbjct: 223 RQEERLAYFPQELYVYGREGEPC-RECGSPIRRGRLGNRSTFFCAACQR 270 >gi|104779568|ref|YP_606066.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] gi|166198732|sp|Q1IGF3|FPG_PSEE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|95108555|emb|CAK13249.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] Length = 270 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G+ I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLVGQRVSRVVVRDRRLRWPIPEDLDVRLSGQCIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LI-NAEVGTLISHLGMSGNLRLVELGLP----AAKHEHVDIELESG-----LMLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPLNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRARYL------KLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVFCPKCQR 270 >gi|170016692|ref|YP_001727611.1| formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] gi|169803549|gb|ACA82167.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] Length = 280 Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + + F + RR KYL Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E + +H + L++N V YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVE----PREATPHKHTEIIFELSDNR-----AVFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + P L LGPEP + + Y+ F K +K+ LL+Q +AG Sbjct: 112 RFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTAFAKSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T SL + +L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTNSLSR------TVLAVLRQNIIDEMARAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG ++ +I R T +C +CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTIMSKIKVGQRGTTFCPFCQ 273 >gi|157373258|ref|YP_001471858.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] gi|157315632|gb|ABV34730.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] Length = 273 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + T + + +LR+ P + G+ I +V RRAKYL Sbjct: 3 MPELPEVEVTRQGITPHLVDQQATALTVRNASLRWPVP-DIAQQIVGETIRNVRRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I ++ +H+H+ + L + + +NDPR Sbjct: 62 LIDTDA-GTTIVHLGMSGSLRIV----SRNTPVEKHDHIDLELASGKI-----LRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 112 RFGAWLWCELPEE-AHPLLSKLGPEPLKDGFNPTYLEQILKNKKKAIKLCLMDNHIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + ++ L L+ E++++L +AI GG++L+D+ Sbjct: 171 GNIYANEALFAAGIHPETQAGNVDTER------LTILVTEVKQILANAIKQGGTTLKDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 225 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 271 >gi|256847514|ref|ZP_05552960.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] gi|256716178|gb|EEU31153.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 135/288 (46%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L + + I ++ + F A G+ I V RR KYL Sbjct: 1 MPEMPEVETVRRGLNEIADGQQIIGIDVNYGKTIENDVEGFREALVGQTIEHVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M GS+ + T H HV N T+ + Y D R Sbjct: 61 LFRFSNHLTMISHLRMEGSYFKQKTGMPVDK----HTHVIFHFKNGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Y LRT+GPEP + F Y HK +K LLNQ VAG+ Sbjct: 112 KFGRMRLVTTGEEMNYGGLRTIGPEPTEQDFKLDYFERILHKSRGKIKPFLLNQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L + I K + A + G+++ Y Sbjct: 172 GNIYCDEVLWMSKINPEQAANTLTHEQ------AKTLRENIIKEIATATEHKGTTVHTYK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ Y GE C CG + +I A R T YC +CQ Sbjct: 226 NAFGDAGGFQDYLKAYDHGGEKC-PRCGTKMVKIKVAQRGTTYCPHCQ 272 >gi|99034656|ref|ZP_01314602.1| hypothetical protein Wendoof_01000584 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 349 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 79 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 138 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + H+HV ++NT+ +I+NDPR Sbjct: 139 IWNTDGSVAVIIHLGMSGKLIYADHDQMRNK----HDHVVFLFSDNTS-----IIFNDPR 189 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + EP + F+ YL K N+K+AL++ K + G+ Sbjct: 190 RFGLVIVLNKEQETDFFSDFG--IEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGV 247 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 248 GNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYA 301 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 302 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 348 >gi|42520959|ref|NP_966874.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652197|sp|Q73G10|FPG_WOLPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42410700|gb|AAS14808.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 271 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQMRNK----HDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + EP + F+ YL K N+K+AL++ K + G+ Sbjct: 112 RFGLVIVLNKEQETDFFSDFG--IEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|119713191|gb|ABL97259.1| putative formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB0_50A10] Length = 269 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + KN +++I +H +NLR+ ++ + I ++ RRAKY+ Sbjct: 1 MPELPEVETTLRAIEKF-KNQRLSNIKVHNRNLRWKVDKDLEINSKNQIIKNLRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ I +HLGMSGS I + +K H+HV N +IYNDPR Sbjct: 60 IFDLDKCSII-LHLGMSGSLRIANNDDNYFLK---HDHVEFLFDNEK------IIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E ++ + LGPEP FN+ YL + +N+K L+NQK V GI Sbjct: 110 RFGSIHLTE--DIDKHRLINHLGPEPLSKEFNSKYLLALCSRSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +K++P++ + L ++ K+++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLYLSKVNPLKDSSKLTIDD------CKKVVRSSKKILDAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ G C C I + R+T+YC+ CQ Sbjct: 222 SADGSPGYFKFKLNVYGREGLDC-KRCKTKIAKTNINKRATYYCSSCQ 268 >gi|255658137|ref|ZP_05403546.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] gi|260849444|gb|EEX69451.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] Length = 274 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEIIR+ L + T+ + + L++ P F + GK++ + RR KY Sbjct: 1 MPELPEVEIIRQYLDEQLPGRTIACADILLTRQLKYPEPEAFQSLVAGKRMKGMRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL++L+ +I+ HL M+GS + + + + + + L +++ D Sbjct: 61 LLLDLQDGSTIVFHLRMTGSLVYDPSGNQRDA----YARMVFHLAGG-----GALVFADV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + L++LGPEP +F YL + +K+ LL+Q+ +AG Sbjct: 112 RTFGCVYGFAAGEEIAVSGLQSLGPEPLSEAFTPAYLAQAIRGRKQPIKSFLLDQRRIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R+ SL Q KL IQ VL D + GG++ R+Y Sbjct: 172 LGNIYADESLFLAGIHPRREAGSLTQAE------CKKLAAAIQHVLRDGLADGGTTFRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G G Q VY + G+PC CG+ I +I GR T +C YCQ Sbjct: 226 RNGEGGYGRHQEHLCVYHRAGKPC-PTCGRPIEKITVGGRGTHFCPYCQ 273 >gi|116625750|ref|YP_827906.1| formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|122252077|sp|Q01RU9|FPG_SOLUE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116228912|gb|ABJ87621.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 264 Score = 189 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L + + + LR P SA G+KI+ + R K+ Sbjct: 1 MPELPEVETVVRSLAP-LVGRRIATAEFRNLRILRGGDPDLMSARLAGRKILSIKRYGKF 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +EG +++HLGM+G ++ S H H ++ T Sbjct: 60 IVAVIEGGGHLMIHLGMTGKLLLGGPSGK-------HTHAVLTFDRGTLL---------- 102 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 F + P R P + ++ + +K+ LLNQ + G Sbjct: 103 --FDDSRQFGCIEYSEEFPKRVARLGPEPMEISFEDFAADLKRRKTRIKSLLLNQTFIRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+RA + P T + KL I +VL +AI+AGGSS+ DY Sbjct: 161 VGNIYADEALFRAGIHPQALTSRIRIER------ARKLYDAIGEVLTEAIEAGGSSISDY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G+FQ + VY +TGEPCL NC IRR++ RS+ +C +CQK Sbjct: 215 VDAEGRSGFFQFSHRVYQRTGEPCL-NCKTPIRRVIVTQRSSHFCPHCQK 263 >gi|146319050|ref|YP_001198762.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|146321256|ref|YP_001200967.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|145689856|gb|ABP90362.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|145692062|gb|ABP92567.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|292558695|gb|ADE31696.1| Formamidopyrimidine-DNA glycolase [Streptococcus suis GZ1] Length = 297 Score = 189 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 94/287 (32%), Positives = 144/287 (50%), Gaps = 17/287 (5%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYLL Sbjct: 24 PELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 I L + +I HL M G + A + +H H + + + ++Y D R+ Sbjct: 84 IYLTDH-VLISHLRMEGKYNFF----ADQVPANKHFHAFFTFIDGST-----LVYQDVRK 133 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+G Sbjct: 134 FGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGLG 193 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E L++AK+ P + + L + + L Q +VL I+ GGS++R Y + Sbjct: 194 NIYVDEVLFKAKVHPAQTSNQLSTDQ------VADLRQATIEVLQLGIEKGGSTIRTYKN 247 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 248 ALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|325123355|gb|ADY82878.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 189 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQK-LVGQRLTGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLTEPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNR--ETQGKLIDTLGPEPLSDDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMRQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|297180061|gb|ADI16286.1| formamidopyrimidine-DNA glycosylase [uncultured bacterium HF0010_16H03] Length = 269 Score = 189 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + N + I +H +NLR+ + +R + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIDKF-TNQRIKSIKVHNRNLRWKVDKNLETISRNQLVKALRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL+ + +I+HLGMSGS I + S IK H+H+ N +IYNDPR Sbjct: 60 IFELDTSS-LILHLGMSGSLRISNVSDNYFIK---HDHIEFIFDNEK------IIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + TS + +R LG EP FN +YL K +N+K L+NQK V GI Sbjct: 110 RFGSLHI--TSNVDTHNLIRNLGAEPLSKDFNGVYLFDLCSKSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L ++++P R ++ K++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLHLSRINPRRLACNISLQE------CKKIVSSSKKILKAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF A VYG+ G C C I++I R+T+YC CQ Sbjct: 222 SADGSPGYFNFALKVYGREGLQC-KVCDDKIKKINLNTRATYYCDNCQ 268 >gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK] gi|315445100|ref|YP_004077979.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|189044665|sp|A4TE57|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum PYR-GCK] gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 282 Score = 189 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T++ + +H +R P +A I RR Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++VHLGMSG ++ ++N H + + L + T + + Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLLGP------VRNENHLRIAVLLDDGT-----ALSFV 109 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG LV P+ + +P D F+ + + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E+LWRAK++ R G K L +L+ V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADESLWRAKINGARLAS------GVSKAKLAELLDAATDVMTDALAQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSFYCPRCQ 277 >gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|166198746|sp|A4FMJ7|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 189 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 29/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV+++ + +R P F+ G+ + RR Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60 Query: 58 KYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KY+ + E++ +++ HLGMSG +++ H V + Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQPDEAPDET----HLRVRFRFDDG---- 112 Query: 111 KYRVIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 ++ + D R FG + L E P+ + P+P + F+ + K+ + + Sbjct: 113 GPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMRKRRTGV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q +V+GIGNIY EALWRAKL R T +L + L+ +V+ Sbjct: 173 KRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQ------ARTLLVAAVEVMQA 226 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ AGG+S D YV+++G GYF + +VYG+ G PC CG +RR RS++ C Sbjct: 227 ALTAGGTSFDDLYVNVNGESGYFDRSLAVYGQAGLPC-PRCGTPVRRDAFMNRSSYSCPR 285 Query: 287 CQ 288 CQ Sbjct: 286 CQ 287 >gi|300858756|ref|YP_003783739.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686210|gb|ADK29132.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302206462|gb|ADL10804.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] gi|302331017|gb|ADL21211.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308276704|gb|ADO26603.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 285 Score = 189 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 20/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +T + + H + R+ P A RG+ + V RR Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGGPQELEARLRGRVLSSVHRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + +++VHLGMSG +I+ + H + SL++ + + + + Sbjct: 61 KFLWFVLDDSCALMVHLGMSGQMLIKQADASLHP----HTRIRCSLSSGSE--QSELWFV 114 Query: 118 DPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG+ + E + + P+ + + + + + + K+ +K LLNQ Sbjct: 115 DQRTFGYWRIAELVYSHNRLVPKPMAHIAADLLEPAQDLMATARLIKTKHLEIKRLLLNQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +IVAGIGNIY E LW A++ P +K L ++ L+ E Q+V+ +A+ GG+ Sbjct: 175 EIVAGIGNIYADEMLWSAQIHPRQKAHRLS------LRAIHSLLNEGQRVMHNALLQGGT 228 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF + YG+ G PC + CG + R + RS+ +C CQ+ Sbjct: 229 SFDSLYVNVNGESGYFDVSLQAYGQEGMPC-TRCGTALVREKFSNRSSHFCPRCQR 283 >gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] Length = 285 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPE+PEVE +RR L ++ V+ + + + F G+++ V R K Sbjct: 2 MPEMPEVETVRRGLEEIVIGKIVSSVTVTWPRIIQAEGGVEAFETRMPGQQLEKVGRVGK 61 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL + I HL M G ++ E T Q+ HV LT+ + + Y D Sbjct: 62 FLLFYWTEV-TWIAHLRMEGKYLYESTESPVD----QYTHVICHLTDGHD-----LRYRD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + +VE + + L P N YL +F K ++K LL+Q ++A Sbjct: 112 VRKFGRIHMVEKADTEAE--IAKLKLGPEPNDLTFDYLQKRFDKTTRSIKAVLLDQGVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ AK+ P + RSL + +I E ++++ AI+ GG+++R Sbjct: 170 GIGNIYADEILFAAKIHPEQSARSLYDEE------IQAIITESRRIMASAIEVGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G F + YGK G+PC CG I +I A R T +C YCQ+ Sbjct: 224 YTNTFGENGQFADYLKAYGKKGQPC-PRCGTEIEKISVAKRGTHFCPYCQR 273 >gi|238855719|ref|ZP_04646015.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260665505|ref|ZP_05866352.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|282934758|ref|ZP_06339998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|238831665|gb|EEQ24006.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260560773|gb|EEX26750.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|281301169|gb|EFA93473.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] Length = 275 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +R+ L ++ T+ + N+ F + KKII + R AK+L Sbjct: 1 MPEMPEVETVRKTLTELVLGKTIEKAKVWYPNIIIGDSESFCNQLKKKKIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L N++I+ HL M G + + + +H+HV T+ T+ + YND R Sbjct: 61 LFRLSDNITIVSHLRMEGKYRL----ATPHEEKNKHDHVEFIFTDGTS-----LRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q ++ LGPE F Y K N+K LL+Q +V+G+ Sbjct: 112 KFGRMQLVETGTEKQKTGIKKLGPEALSEGFTLSYFQRALRNKKKNIKAVLLDQNVVSGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P R SL + + L + I +V+ AI A G+++ ++ Sbjct: 172 GNIYADETLWLSKINPERPGNSLSCDE------ITSLYKAINQVISQAIKAHGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG+ G+ C CG +++ AGR T +C CQ Sbjct: 226 DAEGQTGGYQKYLKVYGRAGKKCF-RCGATLQKNHIAGRGTTFCPKCQ 272 >gi|15836676|ref|NP_297364.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|15836775|ref|NP_297463.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|28197991|ref|NP_778305.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|28198069|ref|NP_778383.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|71275496|ref|ZP_00651782.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71898603|ref|ZP_00680773.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|170729297|ref|YP_001774730.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|170729377|ref|YP_001774810.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|182680617|ref|YP_001828777.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182680697|ref|YP_001828857.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|54037120|sp|P64155|FPG_XYLFT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040774|sp|P64154|FPG_XYLFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9104844|gb|AAF82884.1|AE003861_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|9104967|gb|AAF82983.1|AE003871_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|28056051|gb|AAO27954.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|28056129|gb|AAO28032.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|71163796|gb|EAO13512.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71731550|gb|EAO33611.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|167964090|gb|ACA11100.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|167964170|gb|ACA11180.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|182630727|gb|ACB91503.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182630807|gb|ACB91583.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|307579076|gb|ADN63045.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] gi|307579162|gb|ADN63131.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 271 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR+D P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ S+I+HLGMSG+ + H+HV I L N + + +NDPR Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRLLAPETPLRP----HDHVDIMLNN-----RRVLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV G+ Sbjct: 112 RFGCLLWQEDGQI--HPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTFLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP+ + + +L + ++ +L+ AI+ GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISPL------CEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 224 SPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|258544390|ref|ZP_05704624.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] gi|258520349|gb|EEV89208.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] Length = 272 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++N + I H LR G + + RR K+L Sbjct: 1 MPELPEVETTRRGIAPHLENHRIHSISAHIAKLRQPLDTAELNRISGHTLTRIERRGKHL 60 Query: 61 LIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + L++ +HLGMSG+ I S + +H+HV I+L N + +DP Sbjct: 61 ILHSDQPELALHIHLGMSGALRITPASSP----HKKHDHVAITLDNGD-----ELRLHDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L++ + L LG EP D++FN L Q K S +K ++NQ+ + G Sbjct: 112 RRFGHVALIDPTRPPA--SLANLGDEPLDDNFNGARLYAQTRGKKSAIKTHIMNQRYLTG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ + + P R +L + + +L + I+ VL AI GG++LRD+ Sbjct: 170 VGNIYATEALFASAIHPARAATTLTRAD------CDRLAEAIKTVLQAAIAQGGTTLRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF + YG++GEPC C + ++ + GRST YC +CQ Sbjct: 224 TQPDGTHGYFAQTLNAYGRSGEPC-PRCQRPLQNMTIGGRSTVYCAHCQ 271 >gi|299768861|ref|YP_003730887.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] gi|298698949|gb|ADI89514.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] Length = 274 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDIQK-LIGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSADFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCI-NCETTLENLKLGQRASVFCPQCQ 266 >gi|83855139|ref|ZP_00948669.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83842982|gb|EAP82149.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] Length = 266 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 113/277 (40%), Positives = 165/277 (59%), Gaps = 16/277 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + ++R +LR+ FP +A G+++ + RR+KY+L +L S++VHLGMS Sbjct: 1 MEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYILADLSSGESLLVHLGMS 60 Query: 78 GSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 G +I + + +H+HV + N RV +NDPRRFG MDL++T+ Sbjct: 61 GRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTFNDPRRFGAMDLLDTASA 115 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + L ++GPEP N F+ +L KN+ +K ALL+Q+IVAG+GNIYVCE L+RA Sbjct: 116 DSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRIVAGLGNIYVCETLYRAG 175 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P RK + + L+ I+ VL +AI AGGS+LRD+ DG +GYFQ++F Sbjct: 176 IHPARKAGRIAAKR------VGSLVPIIRDVLNEAITAGGSTLRDFKRADGELGYFQHSF 229 Query: 254 SVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 DVYGREAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 266 >gi|222054672|ref|YP_002537034.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] gi|254789439|sp|B9M5V2|FPG_GEOSF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221563961|gb|ACM19933.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] Length = 271 Score = 188 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ + + LR P G+ I+ + RR KYL Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATKLRHPLPPELDRLLVGQLIVAMDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II HLGM+G + S + +H+H+ + L Y + + DPR Sbjct: 61 LLR-CKGGTIIFHLGMTGMLYLVKASSP----HGKHDHLDLVLDG-----SYILRFTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+P L GPEP + F+A YL + H++ +K +++ ++VAGI Sbjct: 111 RFGTIIW-TDNDPLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSRVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA ++P L + L+ I+ VL DA++AG S++ + Sbjct: 170 GNIYANESLFRAGIAPQTSASDLSPDKDL------LLVDAIKGVLTDAVEAGTSNIESAL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GYF FS+YGK G PC CG IR + GRSTF+C CQK Sbjct: 224 TGERPQGYFPYEFSIYGKKGRPC-PKCGSAIRMMRLGGRSTFFCPLCQK 271 >gi|218288810|ref|ZP_03493073.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] gi|218241168|gb|EED08344.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] Length = 285 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ L ++ HL M G + + + S + H HV L + + Y D Sbjct: 61 LLFQLDQVL-LVSHLRMEGRYAVANPSEPELP----HTHVVFRLASGR-----ELRYADV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG MD V L LGPEP D + + L ++ + + +K+ LL+Q+ +AG Sbjct: 111 RQFGTMDAVLKGEPL-PKGLAELGPEPFDPALDGTALHERWRGRRAPIKSMLLDQRQIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+ ++ L L++EI+ VL AI GGSS+R + Sbjct: 170 LGNIYVDEALFAAGIHPLTPAGAVGAEE------LGVLLREIRDVLARAIGEGGSSVRSF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ +VYG+ G+PC CG I++I AGR T C CQ Sbjct: 224 RDGYGRHGGFQIQLAVYGRAGQPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|255525116|ref|ZP_05392060.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296188081|ref|ZP_06856473.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|255511170|gb|EET87466.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296047207|gb|EFG86649.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] Length = 277 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++R L +K + + + K + + F G+ I+ + RR K+ Sbjct: 1 MPELPEVETVKRVLEPQIKGQKIKYVDISNKQVIAYPDAEAFCDNVIGQTIVGIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I E +++HL M+G +I + K +H HV SL N + Y D Sbjct: 61 LNILFESGDRMVLHLRMTGCLLITPSEYEK----AKHTHVVFSLKNGN-----ELRYIDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + + + LG EP D + YL + KK +K LL Q +VAG Sbjct: 112 RRFGRFWFLKKDEEDTFTGINKLGLEPFDKNLTGEYLHNCLLKKKKPIKECLLEQSMVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A L P R SL +L ++I L I+ S DY Sbjct: 172 IGNIYGDEILFAAGLCPSRPANSLTCEEYD------RLAKQISVTLAYFIEKNAISPEDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG E C C +++I+ AGRS+ +C CQ+ Sbjct: 226 LAGKGLKYRNTPYLKVYGHEKEKC-PVCRHDLKKIMLAGRSSVFCPNCQR 274 >gi|71901945|ref|ZP_00683998.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|71728286|gb|EAO30464.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] Length = 271 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 160/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR++ P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWNIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ S+I+HLGMSG+ + H+HV I L N + + +NDPR Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRLLAPETPLRP----HDHVDIMLNN-----RRVLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV G+ Sbjct: 112 RFGCLLWQEDGQI--HPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTLLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP+ + + +L + ++ +L+ AI+ GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISPL------CEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 224 SPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|118602365|ref|YP_903580.1| formamidopyrimidine-DNA glycosylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166198745|sp|A1AW02|FPG_RUTMC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118567304|gb|ABL02109.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 269 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 157/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI +R L+ ++ N V+ + LHR+NLR+ P + +KI + RRAKYL Sbjct: 1 MPELPEVEITKRGLVPLIINQEVSRVILHRENLRWAIPKNLITILANQKIKTIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I+HLGMSGS + H H + N T+ + NDPR Sbjct: 61 LI-KFEAGTLIIHLGMSGSIKVVDIKTPLLK----HEHFELQFNNGTS-----MRLNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V S + L +LG EP + FN YL + K N+K+ +++ KIV G+ Sbjct: 111 RFGA---VLFSKDGSHKLLDSLGVEPLEAVFNNGYLYQKSRNKRKNIKDFIMDSKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A ++P RK ++ K L Q I+ +L AI AGG++L+D+ Sbjct: 168 GNIYACESLFMASINPQRKAGNVS------KTRYKILTQCIKDILTQAIKAGGTTLQDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG+ GYF SVYG + C C I +IVQ RSTFYC CQ Sbjct: 222 QVDGNPGYFTQTLSVYGCENKTC-HFCKSKIIKIVQNQRSTFYCRKCQ 268 >gi|226951692|ref|ZP_03822156.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] gi|226837557|gb|EEH69940.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] Length = 273 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLT-QRVQSVKVLNASLRWPIPDNLEK-LVGQRLTALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + A H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCEPNDALRK----HDHLIIDFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q + TLGPEP FNA YL + KKN +K AL++ IV G+ Sbjct: 108 RFGCILWLDPDN--QSKLIDTLGPEPLSEDFNANYLREKLSKKNVGIKIALMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L K + KL+ E++++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNIGVHPAQPASTLT------KVQVEKLVIEVKRILKHAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|71279847|ref|YP_266979.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] gi|90101300|sp|Q48AD4|FPG_COLP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71145587|gb|AAZ26060.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] Length = 271 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V+++ + K LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVEVCRLGISPHVIAQEVSEVIIRNKRLRWPIPDEVCSA-VGLPVLKVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSG+ + +H+H + + + + NDPR Sbjct: 60 LLR-FSTGTLLLHLGMSGTIRVIEQDTP----VAKHDHFDLVFKHGKS-----LRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + F YL + + +K L+N +V G+ Sbjct: 110 RFGAVLWLANDEDELG-LLAKLGPEPLSDDFAEGYLFSKAKNRKVPIKTFLMNNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P K + + ++ + K KVL AI GG++L+D+ Sbjct: 169 GNIYANEALFQAGILPTAKAKDIDEHRMNSLTAIIK------KVLSAAIAQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + VYG+ GE C++ C ++ I Q+ RS+ +C CQ+ Sbjct: 223 QADGRPGYFAQSLMVYGRAGEACVT-CKTKLQEIRQSNRSSVFCPSCQQ 270 >gi|294651377|ref|ZP_06728695.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] gi|292822732|gb|EFF81617.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] Length = 281 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 9 MPELPEVETTKTSLLPLLT-QRVQSVKVLNASLRWPIPDNLEK-LVGQRLTALKRRSKYI 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + A H+H+ I + + Y+DPR Sbjct: 67 LAE-FEQDQMLWHLGMSGSFRLCEPNDALRK----HDHLIIDFEDQQ------LRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q + TLGPEP FNA YL + KKN +K AL++ +V G+ Sbjct: 116 RFGCILWL--DQVNQSKLIDTLGPEPLSEDFNARYLLEKLQKKNVGIKIALMDNHVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + + KL+ E++++L AID GGS+LRDY Sbjct: 174 GNIYATESLFNIGVHPAQPASTLTKAQ------VEKLVIEVKRILKHAIDLGGSTLRDYS 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 228 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 274 >gi|255318652|ref|ZP_05359883.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] gi|255304334|gb|EET83520.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] Length = 272 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 159/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 1 MPELPEVETTKKSLEPLLQ-QKVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 59 LAQ-FEHDTMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + LGPEP +FN YL ++ K +K AL++ +V G+ Sbjct: 108 RFGCILWLNH--ETQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++ P + SL + +L+ EI+++L AI+ GGS+LRDY Sbjct: 166 GNIYATESLFNTRIHPAQPASSLSYEQ------IDQLVIEIKRILKFAIELGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 220 NAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 266 >gi|258512306|ref|YP_003185740.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479032|gb|ACV59351.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 285 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ L ++ HL M G + + + S + H HV L + + Y D Sbjct: 61 LLFQLDQVL-LVSHLRMEGRYAVANPSEPELP----HTHVVFRLASGR-----ELRYADV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG MD V L LGPEP D + + L ++ + + +K+ LL+Q+ +AG Sbjct: 111 RQFGTMDAVLKGEPL-PKGLAELGPEPFDPALDGAALHERWRGRRAPIKSLLLDQRQIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+ ++ L L++EI+ VL AI GGSS+R + Sbjct: 170 LGNIYVDEALFAAGIHPLTPAGAVGAEE------LGVLLREIRDVLARAIREGGSSVRSF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ +VYG+ GEPC CG I++I AGR T C CQ Sbjct: 224 RDGYGRHGGFQIQLAVYGRAGEPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|239501755|ref|ZP_04661065.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB900] Length = 274 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NKKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLTP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|170724448|ref|YP_001758474.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] gi|238688687|sp|B1KL38|FPG_SHEWM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169809795|gb|ACA84379.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] Length = 271 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDQEVTGLTVRNASLRWPVP-DLAQQIVGQTIRSVHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + + +H+H+ +SL + + +NDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRVV----TELTPVEKHDHIDLSLASGKI-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L LGPEP ++FN YL K +K L++ IV G+ Sbjct: 110 RFGAWLWYELP-IDAHPLLSKLGPEPLTDAFNPSYLFESLKGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + Q L L+ E++++L +AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQMEAGKVDQER------LIILVSEVKQILANAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGESC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|91070098|gb|ABE11022.1| formamidopyrimidine-DNA glycolase [uncultured Prochlorococcus marinus clone ASNC729] Length = 292 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 141/300 (47%), Gaps = 19/300 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F I RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTIAFPINKEEFIKGLLNSLIYKWDRRGK 60 Query: 59 YLLIEL----EGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKK 111 YL+ +L N ++ + F++ H T K I+N H + + Sbjct: 61 YLIAQLKEVQNENGQFLLENSKNNGFLVIHLRMTGYFKFIENSSHPCKHTRIRF-FDKNN 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y D R FG M + L L +LGPEP F+A YL K+ ++K Sbjct: 120 NELRYIDVRSFGQMWWINKDLSLNKIVKGLGSLGPEPFSKDFDANYLKKVISKRTKSIKA 179 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q IVAGIGNIY E+L+ A +SP R+ R++ + L KL + I VL +I Sbjct: 180 ILLDQTIVAGIGNIYADESLYSAGISPFREARTIKNDE------LIKLKESIVTVLKKSI 233 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +GG++ D+ ++G G F +VY +TG+ C CG +I R GRST +C CQK Sbjct: 234 GSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RRCGNLIERQKITGRSTHWCPKCQK 292 >gi|45644628|gb|AAS73016.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC20E09] Length = 269 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + + +H +NLR+ KK+ +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINKF-ENKRLLKVIIHNRNLRWKVDRIIEKKIDNKKVRSISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ +L I++HLGMSG+ I+ + K H+H + +I+ND R Sbjct: 60 LIQ-FKDLFIMLHLGMSGNLRIQKNNNNYFKK---HDHAEFVFKDEK------IIFNDVR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + Y + ++ LG EP + F+ YL N +K L++QK + G+ Sbjct: 110 RFGSIHLTK--NPYDHKLIKDLGIEPLSDQFDKDYLYRICSNSNLQIKKLLMDQKKIVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP R L + L I+ VL +AI+ GG++L+D+ Sbjct: 168 GNIYASESLFLSNISPERICNRLSVKD------CSNLSNSIKAVLNEAINMGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF+ +VYG+ G+PC S C +I + + RS+F C+ CQ Sbjct: 222 SADGNQGYFKIKLNVYGRDGQPCNS-CNNIITKKIIGQRSSFMCSECQ 268 >gi|322509311|gb|ADX04765.1| mutM [Acinetobacter baumannii 1656-2] Length = 274 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 277 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 133/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E +H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETV----PYKHTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPKTPAN------VLDEVQLSVLRANIISEIKRAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|332304442|ref|YP_004432293.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171771|gb|AEE21025.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 270 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 140/288 (48%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + K LR+ P A G ++ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQQIKRVVVRHKQLRWLVPDEVHLA-EGLRVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + I +HLGMSG I ++ H+H+ I L N + +ND R Sbjct: 60 FIDTDAGSII-LHLGMSGKLRIVNSDTPVIK----HDHLDIVLANGVC-----LRFNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + S + LGPEP F+ L K+ +KN +++ K+V G+ Sbjct: 110 RFGACLWQDVSEPE-IGMIAALGPEPLTADFDGQRLYDLSRTKSVAVKNFIMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + + + K VL AI+ GG++L+D+ Sbjct: 169 GNIYANEALFIAGIDPRKAAKKVSKKTYLALGDIIK------DVLAKAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF VYG+ GE C C I+ + R+TF+C CQ Sbjct: 223 QADGNPGYFAQHLRVYGRKGEAC-EVCASEIQSVTLGQRNTFFCEQCQ 269 >gi|308068369|ref|YP_003869974.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305857648|gb|ADM69436.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa E681] Length = 276 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++ + + + ++ + R D F+ +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIQAFAMELADHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L L ++ HL M G + + ++ +H HV + T + Y D Sbjct: 61 FLRI-LLDGLVLVSHLRMEGRYGL----YSQHDPVEKHTHVIFHFKDGT-----ELRYQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV E+L++A + P + +SL + L + I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSLTDSQFHV------LHEAIVSTLGASIQVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 225 FVNGQGKTGDFQHQLQIYGRNAKPCI-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|262379123|ref|ZP_06072279.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] gi|262298580|gb|EEY86493.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] Length = 276 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 159/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 5 MPELPEVETTKKSLEPLLQ-QKVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 63 LAQ-FEHDTMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + LGPEP +FN YL ++ K +K AL++ +V G+ Sbjct: 112 RFGCILWLNH--ETQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++ P + SL + +L+ EI+++L AI+ GGS+LRDY Sbjct: 170 GNIYATESLFNTRIHPAQPASSLSYEQ------IDQLVIEIKRILKFAIELGGSTLRDYS 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 224 NAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 270 >gi|86604927|ref|YP_473690.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] gi|86553469|gb|ABC98427.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] Length = 283 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + + + + + + + F+ G + RR KY Sbjct: 1 MPELPEVETVRRDLQRLTLGLCILSVEVLLPRTVAYPGKDEFAQGLAGSCLTQWQRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ + VHL M+G + S P H V + L + + + D Sbjct: 61 LLGSLDSGAVLGVHLRMTGQLLWVQGSAPL----PIHTRVRLHLEQG-----WELRFVDL 111 Query: 120 RRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG M LV ++ + P L++LGPEP +F+ Y K +K ALL+Q +V Sbjct: 112 RTFGQMWLVPAGVEPETVIPALQSLGPEPLSPAFSEAYFQAALQKSRRPIKAALLDQSLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+ + + P L + +L + + +VL ++ G++LR Sbjct: 172 AGVGNIYADEALFLSGIHPSTPAAQLSDAAKS------RLRESLIQVLRAGLEQRGTTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G G +Q VYG+ G+PC CG I+R +GRS +C CQ Sbjct: 226 DYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRSKLSGRSAHFCPRCQ 275 >gi|260435903|ref|ZP_05789873.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] gi|260413777|gb|EEX07073.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] Length = 278 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 135/293 (46%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRSRAIASPGGPEAFVAGLCGMTVGQWQRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ VHL M+G F +P + +H V + N+K+ + + Sbjct: 61 YLMAALEPEGGVWGVHLRMTGQFQWH----EQPSEPCKHTRVRLW-----NSKEQELRFV 111 Query: 118 DPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSTDFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG GNIY E+L+ + ++P L L +L + VL +I AGG++ Sbjct: 172 LVAGAGNIYADESLFASGIAPYTPAGQLELKQ------LERLRDALVNVLTISIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + G+PC +CG I+R +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGDPC-RSCGTPIQREKLSGRSTHWCPTCQ 277 >gi|193078273|gb|ABO13237.2| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 274 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|260557193|ref|ZP_05829409.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] gi|260409299|gb|EEX02601.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] Length = 274 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|284047823|ref|YP_003398162.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] gi|283952044|gb|ADB46847.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] Length = 273 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L+ + T+ + + + P F+ +G + V RR KY Sbjct: 1 MPELPEVEQVRISLLPHIVGKTIEKVRVDLPKMILHPDPDAFARRLQGARFTGVRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +ELEG ++VHL M+G+ + + K + P + + L+ N + + D Sbjct: 61 LGLELEGGDWLLVHLRMTGALL----ALPKDQQEPPYTRMAFFLSGREN-----LYFTDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG LV ++ +LGPEP + + A YL + K + +K +L+Q ++AG Sbjct: 112 RTFGVAALV-GEDGWRDKGYESLGPEPLEPALTAEYLRARAKGKTTVVKGFILDQSVIAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R+ L + L ++ V+ ++ G++ R+Y Sbjct: 171 LGNIYADEALFAAGIRPTRRVNRLTRKEW------EALTLGVRAVIHQGLEHHGTTFRNY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +G VY + G PC CG ++++I AGR + YC +CQK Sbjct: 225 QDADGKMGDNSRYLQVYHRKGLPC-RRCGTLLKQIKVAGRGSVYCPHCQK 273 >gi|302537166|ref|ZP_07289508.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446061|gb|EFL17877.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 289 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 146/294 (49%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + + +R F+A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVAAVEVLHPRAVRRHLAGGPDFAARLAGQTIGVPRRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE +LS++ HLGMSG +++ + +H + + ++T T+ V Sbjct: 61 KYLWLPLEGRDLSVLGHLGMSGQLLVQPADAP----DEKHLRIRLRFADDTGTELRFVDQ 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + V S + + + +P D F+ K + +K ALL+Q + Sbjct: 117 RTFGGLSLHETVPGSAEGLPDVIAHIARDPLDPLFDEGAYHLALRAKRTTVKRALLDQSL 176 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ GG+S Sbjct: 177 ISGVGNIYADEALWRARLHYERPTATLTRPRS------AELLTHVREVMNAALAVGGTSF 230 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 231 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 283 >gi|67458634|ref|YP_246258.1| formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] gi|75536900|sp|Q4UMW5|FPG_RICFE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|67004167|gb|AAY61093.1| Formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] Length = 276 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 161/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ ++ I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIELIIENVELKRDNLRYKLSPLLASEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----PSNYETKKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL + + +KN +++ +I+ G+ Sbjct: 112 RFGMIYNFKTNFLEK-ELFNNLGVEPLSDSLTLEYLKSKLITRKIPIKNLIMDNRIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P + +L + + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLYLARIHPDKLGSNLRDDE------IESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ + CL NC I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGRERQNCL-NCSSTIIKTKHSGRSTFYCRTCQ 271 >gi|293611034|ref|ZP_06693333.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826686|gb|EFF85052.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 274 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LA-KFEQDQMLWHLGMSGSFRLTEPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|169794826|ref|YP_001712619.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|215482373|ref|YP_002324555.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|301510336|ref|ZP_07235573.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB058] gi|332852280|ref|ZP_08434085.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332870503|ref|ZP_08439267.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] gi|169147753|emb|CAM85616.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|213988590|gb|ACJ58889.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|332729410|gb|EGJ60750.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332732240|gb|EGJ63508.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] Length = 274 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 154/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 133/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E +H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETV----PYKHTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLPYMKAVFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPKTPAN------VLDEVQLSVLRANIISEIKRAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|297180566|gb|ADI16778.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_11B23] Length = 270 Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 159/288 (55%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N ++ I + LR F + +I D+ RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISNQSIKKILVRNNKLRIPFNKKLAKEITNIEISDIKRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ SI++HLGM+G+ + +K IK +H+H+ L++ +IYND R Sbjct: 61 IVDFANGYSIVIHLGMTGNLRV-----SKKIKYLKHDHIIFYLSSGN-----VLIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + T+ + L GP+P + NA YL ++ K +++K+ LLN K+++GI Sbjct: 111 RFGLIQIYRTNE--SFFLLDNNGPDPFEKEANADYLFNKIKKSTASIKSILLNHKVISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +SP R + + + K++QE +K+L AI AGG++L DY Sbjct: 169 GNIYASEILFATNISPTRLGKDVSYDE------CKKILQESKKILSKAIKAGGTTLNDYF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + GYF+ VYG+ G+ C S C I +I Q+ RST++C Q Sbjct: 223 NAESKPGYFKIQLKVYGRDGQKC-SKCESNILKITQSNRSTYFCKESQ 269 >gi|317968874|ref|ZP_07970264.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0205] Length = 294 Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 24/295 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L + T+ + + R P F +A +G + RR KY Sbjct: 11 PELPEVETVRRGLERQTRGFTIERVEVLRARAIAAPPVPAQFCSALQGCSVDQWMRRGKY 70 Query: 60 LLI----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+ E VHL M+G F+ T+ + H V + Sbjct: 71 LMASLKRSEEDAGHWGVHLRMTGQFLWMETAK----EPCSHTRVRFWNPEGQ-----ELR 121 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + L+ LGPEP +F Y+ + + +K ALL+ Sbjct: 122 FVDLRSFGEMWWVPPGKPLESVMTGLKRLGPEPFSAAFTPQYMRQKLKGSSRAIKTALLD 181 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY E+L+ + ++P + SL L +L + +VL +I AGG Sbjct: 182 QALVAGVGNIYADESLFMSGIAPEERAGSLKLKQ------LERLHSALVEVLTTSIGAGG 235 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G+ G + NA VY +TGEPC CG IRR GRS+ +C CQ Sbjct: 236 TTFSDFRDLSGTNGNYGNAAWVYRRTGEPC-RVCGTPIRRDKLGGRSSHWCPSCQ 289 >gi|184159399|ref|YP_001847738.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|332876239|ref|ZP_08444014.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] gi|183210993|gb|ACC58391.1| Formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|323519338|gb|ADX93719.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii TCDC-AB0715] gi|332735511|gb|EGJ66563.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] Length = 274 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|291302738|ref|YP_003514016.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290571958|gb|ADD44923.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 280 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + +TD+ + +R P F A G I RR Sbjct: 1 MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + L+ +++ HLGMSG +IE + H + + + ++ + Sbjct: 61 KFLWLPLDSGDALLCHLGMSGQLLIEPPDKP----DGPHLRIRLVFDQAEH----QLRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M + + + + P+ D +F+ + + + +K ALL+Q ++ Sbjct: 113 DQRTFGEMLVSPDGAELPGE-IAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQSLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L ++ L + +L++ I++V A++AGG+S Sbjct: 172 SGVGNIYADEALWRARLHGNHPSQELSDA------VARELVEHIREVFDAALNAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G GYF + +VYG+ EPC CG + RI RS+F+C CQ Sbjct: 226 ALYVNTNGESGYFDRSLAVYGRAEEPC-RRCGTPVERIKFTNRSSFHCPSCQ 276 >gi|212637669|ref|YP_002314194.1| formamidopyrimidine-DNA glycosylase [Shewanella piezotolerans WP3] gi|226706486|sp|B8CVD1|FPG_SHEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|212559153|gb|ACJ31607.1| Formamidopyrimidine-DNA glycolase [Shewanella piezotolerans WP3] Length = 271 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ ++ + + + VTD+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTKQGVSPYLIDNRVTDLIIRNPSLRWPVP-DIAKQIIGQTIRAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + +H+H+ + L + + YNDPR Sbjct: 60 LIDTDA-GTTIVHLGMSGSLRILPINSP----VEKHDHIDLVLASGKI-----LRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +++FN+ YL K +K L++ IV G+ Sbjct: 110 RFGAWLWNELP-EQAHPLLAKLGPEPLESAFNSSYLLSALANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVDAER------ISILVAEVKQILARAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF VYG+ G+ C CGQ++ I R+T +C+ CQ+ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGDTCTH-CGQLLSEIRLGQRATVFCSICQQ 270 >gi|262202010|ref|YP_003273218.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] gi|262085357|gb|ACY21325.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+ + + R R K + V RR Sbjct: 1 MPELPEVETVRRGLADHLVGRTIRKVEVLHPRAARRHVGGDLDLIGRLRNKSVTGVRRRG 60 Query: 58 KYLLIELEGNLSI---IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL +++ +VHLGMSG +I H + SL + + Sbjct: 61 KYLWLDVADARDRAAVVVHLGMSGQMLIARAGAPDHT----HLRIRASLDDGN-----EL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQ---------YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + D R FG + + + + + +P D F+A + K+S Sbjct: 112 RFVDQRTFGGWHVDDYAEPEDAVAQSSSLLPTSVAHIARDPFDPDFDAEATVSRIRTKHS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +++G+GNIY EALWRA+L R +G + L +L+ + V+ Sbjct: 172 EIKRVLLDQTVISGVGNIYADEALWRARLYGGRVA------DGISRPKLRELLTAVSDVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 +A+ GG+S YV+++G GYF+ + + YG+ G+PC CGQM+RR RS+++C Sbjct: 226 GEALAVGGTSFDALYVNVNGQSGYFERSLNAYGRAGQPC-RRCGQMMRRESFMNRSSYFC 284 Query: 285 TYCQK 289 CQ+ Sbjct: 285 PRCQR 289 >gi|260548865|ref|ZP_05823087.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] gi|260408033|gb|EEX01504.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] Length = 274 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDI-QRLVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----EFRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ Y + GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYSRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|311739749|ref|ZP_07713584.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305565|gb|EFQ81633.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + S GK++ V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEPLSGLLIGKEVAAVARRGKFM 60 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I T H ++ L+ Sbjct: 61 WLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTTDSP-------HLRISAQLSGG-----VE 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ + +G +P + F+ + + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWLYAPWAKI------SHIGIDPLEPDFDIVATARRLRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ GG Sbjct: 163 QTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLEAAQEVMAAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQ-RCGTPLERCVISGRSTHFCPHCQ 271 >gi|117928780|ref|YP_873331.1| formamidopyrimidine-DNA glycosylase [Acidothermus cellulolyticus 11B] gi|166215603|sp|A0LV85|FPG_ACIC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117649243|gb|ABK53345.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus cellulolyticus 11B] Length = 284 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + + + +R F+ G++I V RR Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +L+++ HLGMSG F++ + P+H + T+ + + Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASPS----PKHLRARFAFTDGDP----ELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + L + + + P+ D +F+ +F ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLTLAPL-IADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L T + +L+ ++ V A+ AGG+S Sbjct: 172 SGVGNIYADEALWRARLHYATPTVDISAA------TCRRLLAALRAVFRAALRAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G G+F + +VYG+ G+PC CG I R RS+F C CQ Sbjct: 226 ALYVNVNGQSGFFDRSLAVYGRAGQPC-RRCGTAIVREPFMNRSSFRCPACQ 276 >gi|309792770|ref|ZP_07687214.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] gi|308225180|gb|EFO78964.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] Length = 275 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEI+ R+L + + + + + F A G+ I+ V RRAK Sbjct: 1 MPELPEVEIVARSLAAQVVGRKIVMLEKLDWERMVETPDLPDFCALLIGRTILGVGRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LLI+L+ ++ VHL MSG+ I+ + QH H+ + L + R+ + D Sbjct: 61 WLLIQLDAGWTLAVHLRMSGNLIVYGPAQPVD----QHTHLVLGLDDGR-----RIFFTD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L++ + PEP D+ F + +L ++ + LK LL+Q +A Sbjct: 112 ARKFGRLRLLDPAGIAHLDAAYG--PEPLDSHFTSSHLAALLAQRRTKLKPLLLDQGFIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW A+L P+ TP + L IQ+VL AI GSSLR+ Sbjct: 170 GLGNIYANEALWIAQLHPLLPANQ------TPAQHVPALHAAIQQVLHTAIQNQGSSLRN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G+ Q F VY + +PC C I RIV RSTF+C CQ+ Sbjct: 224 YRNSYGEAGHNQEHFHVYDRAAQPC-ERCSTAINRIVVGQRSTFFCPQCQR 273 >gi|254383290|ref|ZP_04998643.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] gi|194342188|gb|EDX23154.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] Length = 286 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + P F+A RG+ + RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +LS++ HLGMSG +++ + +H + + + T + + Sbjct: 61 KYLWLPLAGRDLSVLGHLGMSGQLLVQPADAP----DEKHLRIRVRFDDAAGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTR------PLSAELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|255325274|ref|ZP_05366380.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] gi|255297839|gb|EET77150.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + S GK++ V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEPLSGLLIGKEVAAVARRGKFM 60 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I T H ++ L+ Sbjct: 61 WLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTTDSP-------HLRISAQLSGG-----VE 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ + +G +P + F+ + + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWLYAPWAKI------SHIGIDPLEPDFDIVATARRLRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ GG Sbjct: 163 QTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLESAQEVMTAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQ-RCGTPLERCVISGRSTHFCPHCQ 271 >gi|297191815|ref|ZP_06909213.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] gi|297151083|gb|EFH30953.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] Length = 286 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + +R P F+A G+ + D RR Sbjct: 1 MPELPEVEVVRRGLQSWVSGRTIADVQVLHPRAIRRHLPGAQDFAARLTGRTVGDARRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + + SI+ HLGMSG +++ + + +H + I T+ T + + Sbjct: 61 KYLWLPLADTDTSILGHLGMSGQLLVQ----PEHADDEKHLRIRIRFTDPLAT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L E + L + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHENAPDGLPDVLAHIARDPLDPLFDDAAFHTALRARRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRAKL R T +L + +L++ +++V+ A+ GG++ Sbjct: 174 ISGVGNIYADEALWRAKLHYERPTATLTRPRSV------ELLRHVREVMTAALAVGGTTF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 280 >gi|328885313|emb|CCA58552.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 286 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ + P F+A G++ RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVTEVEVLHPRAVRRHPAGGADFAARLTGQRFEVARRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + + ++ HLGMSG +++ A + +H + I ++ T + + Sbjct: 61 KYLWLPLAESGTSVLGHLGMSGQLLVQPEGAA----DEKHLRIRIRFDDSAGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDQTPAGLPDVIGHIARDPLDPEFDDAAFQSALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYDRPTATLTRPRS------AELLGHIRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 280 >gi|262281147|ref|ZP_06058929.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] gi|262257378|gb|EEY76114.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] Length = 274 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWAIPDDVHK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHFIIRFEE------HELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP N FNA YL + K+ K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSNDFNAEYLASKLKNKSVGTKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAADLSLEQ------IEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ G+ C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGQMCV-NCETTLENLKLGQRASVFCPECQ 266 >gi|159036824|ref|YP_001536077.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] gi|189044672|sp|A8M661|FPG_SALAI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157915659|gb|ABV97086.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] Length = 287 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + ++ + P HF+ G + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPGAAPDEA----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG V + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGG-LSVSAGGAEMPTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQTLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R +G +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRARLHGARPA------DGLTGPAALRLLGHVRDVLGEAIKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG +RR RS++ C CQ Sbjct: 226 ALYVNVNGESGYFDRALNVYGRADQPC-RRCGTPVRREAFMNRSSYSCPRCQ 276 >gi|33866493|ref|NP_898052.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8102] gi|39931216|sp|Q7U4V2|FPG_SYNPX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633271|emb|CAE08476.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Synechococcus sp. WH 8102] Length = 278 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 134/293 (45%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + R F G ++ SRR K Sbjct: 1 MPELPEVETVRRGLADRLSLFEIERVEVCRSRAIASSGGVAAFLVGLTGARVGTWSRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ VHL M+G F +P H V N + + + Sbjct: 61 YLMAALEPNRGIWGVHLRMTGQFQWI----EEPSTPCTHTRVRFWNANG-----HELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V ++ P L LGPEP +F+A YL Q + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPDVELTVGIPGLARLGPEPFSEAFSAPYLKRQLKNSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P+ L L +L + +VL +I AGG++ Sbjct: 172 LVAGVGNIYADESLFSAGIPPLTPAGRLTLAQ------LERLRSSLVEVLTTSIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + GEPC CG +IRR +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGEPC-RRCGTIIRRDKLSGRSTHWCPTCQ 277 >gi|85714159|ref|ZP_01045148.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] gi|85699285|gb|EAQ37153.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] Length = 276 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 115/280 (41%), Positives = 164/280 (58%), Gaps = 14/280 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ T+ + RK+LRF F F A G+ +I + RRAKYLL++L +++HLGMS Sbjct: 1 MEGATIIRAEIRRKDLRFPFQTDFVARLEGQTVIGIGRRAKYLLVDLASGDVLLMHLGMS 60 Query: 78 GSFIIEHTSC--------AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF + + + + H+HV ++++ +++NDPRRFG+M +V Sbjct: 61 GSFRVIDAAGVAAPGDFHQRRNEARAHDHVRFTMSSGA-----EIVFNDPRRFGYMKVVA 115 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L+ LGPEP N F+A L K ++LK ALL+Q++VAG+GNIYVCEAL Sbjct: 116 RAALGDEPLLKGLGPEPLGNEFDAAMLAQSCRNKKTSLKAALLDQRVVAGLGNIYVCEAL 175 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 +RA+LSP R +L G P + +L+ I VL AI AGGSSLRD+ G +GYF Sbjct: 176 FRARLSPRRLAATLALKTGAPSERAERLVAAIHDVLNQAIKAGGSSLRDHRRTTGELGYF 235 Query: 250 QNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 Q++F VY + G+ C C +RR Q GRSTF+C CQ Sbjct: 236 QHSFQVYDREGDTCRMPACKGTVRRFTQNGRSTFWCPGCQ 275 >gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] Length = 291 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + + H + +R P F+ G+++ RR Sbjct: 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL ++L G +++ HLGMSG +++ + +H V + ++ + + Sbjct: 61 KYLWVDLSGGEAVLAHLGMSGQMLVQPVGAP----DEKHLRVRVVFEDD----GPELRFV 112 Query: 118 DPRRFGF---MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG +LVE + + + +P D F+A + +++K ALL+Q Sbjct: 113 DQRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY E+LWRA+L +R T L +L+ +V+++A+ GG+ Sbjct: 173 TLVSGVGNIYADESLWRARLHGLRPTAKLTTAKT------AELLGHATQVMLEALGQGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + +VYG+ PC CG I R RS++ C CQ Sbjct: 227 SFDALYVNVNGQSGYFDRSLAVYGQEDRPCA-RCGTAIVREPFMNRSSYSCPRCQ 280 >gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] gi|90101299|sp|Q3ABL4|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] Length = 263 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 146/290 (50%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L + T+ + ++ + + F+ GK+I+ + RR KY Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLPKIIKNVSVEEFTRRVVGKEIVALKRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI+L G ++ VHL M+G +I K H H L + + +ND Sbjct: 61 LLIDLSGKETVTVHLRMTGKLLILPKGSPKDK----HTHAIFDLGD------LELHFNDI 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + +GPEP ++ F YL + NLK LL+QKI+AG Sbjct: 111 RQFGGF----------SFEMPEIGPEPLEDEFTPEYLKTKLKASQKNLKAVLLDQKIIAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A LSP R SL ++ +L + I+K+L I+ G+S+RDY Sbjct: 161 IGNIYADEILFEAGLSPKRIAASLSEDE------AEELFKAIRKILALGIEYRGTSIRDY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G FQ VYGK G C+ C ++ R AGRST YC +CQK Sbjct: 215 VDAENQQGSFQRLLKVYGKNGSLCV-RCNNVLIRERHAGRSTHYCPHCQK 263 >gi|300933884|ref|ZP_07149140.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 297 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 40/313 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L + + + +R P FS+ +I V RR KY Sbjct: 1 MPELPEVEVVRRGLESHILGRRFASVEVFHPRAVRGFDPVSFSSLLDATRIRSVDRRGKY 60 Query: 60 LLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L + +EG+ + VHLGMSG ++ + +H + + T+ + + Sbjct: 61 LWMVVEGDSGASEQALFVHLGMSGQMLVNR----ETQPVGKHERIRATFTDGS-----VL 111 Query: 115 IYNDPRRFGFMDLVE-----------------TSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + D R FG ++ + + L ++ + Sbjct: 112 SFVDQRTFGRWAMMSLVPDPHGTVDAIGGPRLIPEAVAHVAMDPLETAFTEDDRHLDNTI 171 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + KNS +K LL+Q ++AGIGNIY EAL+ A + P R+ G + + ++ Sbjct: 172 TRIKAKNSEIKRVLLDQTVIAGIGNIYADEALFAAGIRPRRRAS------GLSRPAIRRI 225 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 I + V++ A+D GG+S YV+++GS GYF + VYG+ G+PC CG I+R+ Sbjct: 226 IGHARAVMLRALDEGGTSFDSLYVNVNGSSGYFSRSLQVYGREGKPC-KVCGTPIKRVQF 284 Query: 277 AGRSTFYCTYCQK 289 GRS+ YC CQ+ Sbjct: 285 GGRSSHYCPVCQR 297 >gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 289 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ ++ + +R F+A +G + RR Sbjct: 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + + S++ HLGMSG +++ A + +H + IS ++ T + + Sbjct: 61 KYLWLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T SL + +L+ I+ V+ A+ AGG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTASLTRPRS------AELLGHIRDVMNAALAAGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|225181343|ref|ZP_03734787.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] gi|225167924|gb|EEG76731.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] Length = 274 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IR L V+ + + +++ GK++ RR KY Sbjct: 1 MPELPEVETIRCGLEQVLPGRVFAAVEIGYGGSIKDPAAADVMTRLPGKRVTGTGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L+ + +++HL M+G + + H HV S T+ + + ++D Sbjct: 61 LQIFLDDDSVLVIHLRMTGQLVFNEGAAVTDK----HTHVVFSFTDGST-----LAFSDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + V S L TLGPEP F+ YL + K+ +K LLNQ+ +AG Sbjct: 112 RKFGTIWWVPISRLDHIKGLATLGPEPLSADFHFSYLNREVEKRTVTIKALLLNQQFLAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L RA++ P RK RSL + L I++VL +AI+ G+S+ DY Sbjct: 172 LGNIYADEILHRAQILPQRKARSLSRQERQH------LFSAIREVLAEAIECRGTSMSDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++G FQN VYG+ + C C + I R AGR T YCT CQ Sbjct: 226 RDSAGALGEFQNRLQVYGRRDQDC-PRCQKKISRSKVAGRGTHYCTSCQ 273 >gi|254430782|ref|ZP_05044485.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] gi|197625235|gb|EDY37794.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] Length = 282 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + +HR D P F+AA +G + RR K Sbjct: 1 MPELPEVETVRRGLEQRTQGFAIARVQVHRPRAVASPDDPEAFAAALQGCTVQHWRRRGK 60 Query: 59 YL-----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL + VHL M+G F+ H V + Sbjct: 61 YLISQLQRGDGRDGGHWGVHLRMTGQFLWLEAPRPSCA----HTRVQLWNDQGQ-----E 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPL--RTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M + + R LGPEP +F A YL + + + +KNAL Sbjct: 112 LRFVDTRSFGQMWWIPPGEPPEMVMGGLRHLGPEPLGPAFTASYLEGRLNGSSRPIKNAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY E+L+ A + P L L +L++ + +VL +I A Sbjct: 172 LDQAVVAGVGNIYADESLFAAGIRPHTPAGQLRP------HQLDRLVKALVEVLEISIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G+ G + VY + GEPC CG I+R AGRS+ +C CQ Sbjct: 226 GGTTFSDFRDLTGTNGNYGGVALVYRRGGEPC-RRCGTPIQRHKLAGRSSHWCPNCQ 281 >gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + +R P + G+ ++ RR Sbjct: 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + I+VHLGMSG +++ + + +H + L + + + + Sbjct: 61 KYLWLVLEPSSVAIVVHLGMSGQMLVQDPTVP----DEKHLRIRARLESGID-----LRF 111 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV + + +P D F+ + K++ +K ALL+ Sbjct: 112 VDQRTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHTEIKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+G+GNIY EALWRA++ R T L L L+ + V+ +A+D GG Sbjct: 172 QTVVSGVGNIYADEALWRAEIHGNRPTDKLSGPR------LRVLLDAARDVMTEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ PC CG IRR RS++ C CQ Sbjct: 226 TSFDALYVNVNGQSGYFDRSLNAYGQENLPC-RRCGAPIRREKFMNRSSYSCPKCQ 280 >gi|306836416|ref|ZP_07469393.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304567697|gb|EFM43285.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 144/296 (48%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + +T + + + GK+I V+RR K++ Sbjct: 1 MPELPEVESVRRGVESYVVGKEITSVDIAHPRANRGQDEPLAGLVVGKEIAAVARRGKFM 60 Query: 61 LIELEGNLSIIVHLG-------MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E G + H MSG I HT H +T+ L++ T Sbjct: 61 WLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHTDSP-------HRRITVVLSDAT-----E 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ S +G +P + F+ + KK + +K ALL+ Sbjct: 109 LHFVDQRTFGYWLYAPWSTI------SHIGLDPLEPDFDIASAARRLRKKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A+ AGG Sbjct: 163 QTLVSGIGNIYADEALWTARISPRKKASALRQKDAV------ALLSAAQTVMSAALKAGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +CQ Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHCQ 271 >gi|302522138|ref|ZP_07274480.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|318056549|ref|ZP_07975272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actG] gi|318076723|ref|ZP_07984055.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actF] gi|302431033|gb|EFL02849.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 284 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + +R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+ G +++ HLGMSG +++ + H V I + T + + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAER----HLRVRIGFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T L + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTAGLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ S++ HLGMSG ++ + +H + + + T + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVRPADAP----DEKHLRIRMRFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|239944598|ref|ZP_04696535.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 185 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 147/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ + +R F+A RG ++ RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E S++ HLGMSG +++ + +H + + + T + + Sbjct: 61 KYLWVPIEEASASLLGHLGMSGQLLVQPADAP----DEKHLRIRMRFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRAKL R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRAKLHYDRPTATLTRPKS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC + C +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-NRCSTPMRRRAWMNRSSYYCPRCQR 280 >gi|78185409|ref|YP_377844.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9902] gi|78169703|gb|ABB26800.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9902] Length = 278 Score = 185 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I + R HF A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVDHFVAGLKGATVGAWSRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ + S VHL M+G F T A H V N + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQWHATPAA----PCSHTRVRFW-----NQHNEELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGDDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LIAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LIRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPISREKLSGRSTHWCPSCQR 278 >gi|295836306|ref|ZP_06823239.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295825948|gb|EFG64563.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 284 Score = 185 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + +R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G ++ HLGMSG +++ + +H + I + T + + Sbjct: 61 KYLWLPLDGAGEAVLAHLGMSGQLLVQPHAAP----AEKHLRLRIGFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTAIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T SL + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTASLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG IRR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPIRRDAWMNRSSYYCPKCQR 280 >gi|6016043|sp|P95744|FPG_SYNEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1781316|emb|CAA71333.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus] Length = 284 Score = 185 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ + R P F R ++I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRRIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T H V + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTTPQP----PCPHTRVRWFF-----PTRAELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTLTPEQ------VQRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|148238875|ref|YP_001224262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] gi|147847414|emb|CAK22965.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] Length = 283 Score = 185 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 101/299 (33%), Positives = 143/299 (47%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + DI + R P RG+K+ SRR K Sbjct: 1 MPELPEVETVRRGLANRLQSFVIDDIEVLRDRAVASPGGPQALRLGLRGQKVGAWSRRGK 60 Query: 59 YLLIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ + N VHL M+G F T + +H V + T Sbjct: 61 YLVAQLHDPQTGHCNGVWGVHLRMTGQFQWHPTPT----EPCRHTRVRLWNTAGE----- 111 Query: 113 RVIYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V + + L+ LGPEP FNA YL + ++K A Sbjct: 112 ELRFVDLRSFGEMWFVPQNVSIDAVMTGLQRLGPEPFSEEFNATYLEQKLKGSTRSIKAA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG GNIY E+L+ A ++P RK L L +L + VL +I Sbjct: 172 LLDQAVVAGAGNIYADESLFAAGIAPHRKAGELNLPE------LERLCTCLVDVLEMSIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGG++ D+ ++G G + SVY +TG+PCL+ CG I R GRST +C CQ+ Sbjct: 226 AGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPCLA-CGTPIERQRLGGRSTHWCPVCQR 283 >gi|256397116|ref|YP_003118680.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] gi|256363342|gb|ACU76839.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] Length = 290 Score = 185 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + +R P F+A G ++ RR Sbjct: 1 MPELPEVEVVRRGLERWAVGRTVAAAEVLHPRAIRRHPDGPEDFAARAAGLTLLSAERRG 60 Query: 58 KYLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + E ++ HLGMSG +++ + + +H + + ++ ++ Sbjct: 61 KFLWLPLGEGETSVGEAVTGHLGMSGQLLLQPSGTP----DEKHLRIRFTFADDGPELRF 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + + + D F+ + + ++N+ LK ALL Sbjct: 117 VDQRTFGGMALEKLEHDRQGVVVPASVVHIARDVLDPEFDVDFFHSELRRRNTGLKRALL 176 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q V+GIGNIY EALW A+L R T + + + ++++ ++V+ A+ G Sbjct: 177 DQTRVSGIGNIYADEALWIARLHYDRPTSKMRRPDTD------RVLEAAREVMTAALAVG 230 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S YV+++G GYF + YG+ GEPC CG I+R RS+++C CQ+ Sbjct: 231 GTSFDSLYVNVNGESGYFARSLHAYGREGEPC-ERCGTPIKRESFMNRSSYFCPKCQR 287 >gi|121999089|ref|YP_001003876.1| formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] gi|166215627|sp|A1WZG2|FPG_HALHL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121590494|gb|ABM63074.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] Length = 270 Score = 185 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + T+ + + ++ LR+ P AA G++++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLQVHLVGRTLQRVVVRQRQLRYPVPARVEAAVVGEEVVALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L G +++HLGMSGS + A+ +H+HV + L + V DPR Sbjct: 61 LIRLGGGAWLLLHLGMSGSLRLV----AETDAPGRHDHVDLVLNDGR-----AVRLTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + LR LGPEP ++F+ L + +K L++ +V G+ Sbjct: 112 RFG-CLLLGDGDPQDHRLLRRLGPEPLGSAFDGAVLHRAARGRRVAVKALLMDATVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P + +L ++ VL A+ AGG++LRD+ Sbjct: 171 GNIYANEALFRAGIRPD------RAAGRIARARYDRLAGAVRAVLEAALAAGGTTLRDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF SVY G CG +R+I A R T++C CQ+ Sbjct: 225 DGSGEPGYFAVNLSVY---GASVCPVCGGALRQIRLAQRGTWFCPRCQR 270 >gi|305680813|ref|ZP_07403620.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] gi|305659018|gb|EFM48518.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] Length = 312 Score = 185 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 91/320 (28%), Positives = 139/320 (43%), Gaps = 44/320 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+TD+ +H F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTITDVAVHHPRAIRHVLGGEGEFRSEILGRTIIGLGRRG 60 Query: 58 KYLLIELEGNLSII-------------------------VHLGMSGSFIIEHTSCAKPIK 92 K+L + L + VHLGMSG +I+ ++ Sbjct: 61 KFLWLNLADPAAATASASSVPTSQPTPQATPQAGDQVVVVHLGMSGQMLIKDSNANSDDP 120 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADN 149 +H + + ++T ++ + D R FG+ LV+ L + + D Sbjct: 121 KFKHCRIQVRFDDDT-----QLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 ELKLSEVAATMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPA--- 232 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG Sbjct: 233 ---ALKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPCD-RCG 288 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 ++ + RS+ YC +CQ Sbjct: 289 TILVKEKFTNRSSHYCPHCQ 308 >gi|146328737|ref|YP_001210018.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] gi|166215622|sp|A5EXK6|FPG_DICNV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146232207|gb|ABQ13185.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] Length = 272 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L ++ T+T + + LR + +I +++RRAKYL Sbjct: 1 MPELPEVETCKKGLRPLLCQKTITAVDVRAARLREPLDAIALSQLIHCQITEITRRAKYL 60 Query: 61 LIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I + + VHLGMSGS + + +H+H+ I+L + Y + Y+DP Sbjct: 61 IININREDIAVLVHLGMSGSLRV----LPQTEPIKKHDHIIITLNDG-----YSLRYHDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + L+ LG EP D+S L K+ + + ++NQ I+ G Sbjct: 112 RRFGLFTVFHAQKP--HRLLQHLGIEPLDDSCTGDVLHQHCQKRKIKINSLIMNQNIIVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ + + P R ++L L+ +I+ +L AI GG++LRD+ Sbjct: 170 IGNIYATEALFLSGIRPDRPAQTLSAAE------CASLMAQIKTLLTAAIARGGTTLRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYGK+G+ C CG ++ + + R T YC +CQ+ Sbjct: 224 SAPDGHAGYFQQQLHVYGKSGQHC-PKCGNILEDLKISNRGTVYCPHCQR 272 >gi|320108584|ref|YP_004184174.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] gi|319927105|gb|ADV84180.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] Length = 270 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 133/292 (45%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF-SAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + + L K P G +I V R K Sbjct: 1 MPELPEVETVANGVHERVHGRRIQHVTLGTKPEPLKSPAALIEETLTGARIERVHRVGKT 60 Query: 60 LLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + + VHLGM+G ++ ++ P H H ++L + + + Sbjct: 61 IVFDLLRDKKPAQFTVHLGMTGRLLVSKGE----VEVPPHTHAILALDDER-----EIRF 111 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + ++ P G + F + + +K ALLNQ + Sbjct: 112 VDPRRFGRLAVIA-------PQTTYAGTGQEPLTIGLEDFIALFRSRKTPIKAALLNQSL 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIY E+L+RA + P R+ L + L +L ++ VL AI GGSS+ Sbjct: 165 LHGVGNIYADESLFRAGIRPKRQAGRLTRAE------LARLHTALKDVLKHAIQLGGSSV 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYV DG G+FQ VY +TG+PCL C I++I GRST +C CQ Sbjct: 219 SDYVDADGVRGFFQLEHKVYMRTGQPCL-VCETPIKKITVGGRSTHFCPVCQ 269 >gi|296117606|ref|ZP_06836190.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295969337|gb|EFG82578.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 270 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 31/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + + + + A + + V+RR KYL Sbjct: 1 MPELPEVEVVRRGLEPHIVDHAFKSVEILHPRANRGQDEPLGALLHNRVVSAVARRGKYL 60 Query: 61 LIELEGNLSI-----IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 EL+G+ +HLGMSG I HT H + LT+ + + Sbjct: 61 WCELDGHTEREDDVLFMHLGMSGQLRIGHTDSK-------HVRIRAHLTDGVD-----LS 108 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG+ + + +G +P F+ + + K +++K ALL+Q Sbjct: 109 FIDQRTFGYWLVAPKAKID------HIGHDPLSPDFDIVAAARKLRTKKTHVKTALLDQT 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I +GIGNIY EALWRA +SP+RK L+Q + + ++V+++A+ GG+S Sbjct: 163 IASGIGNIYADEALWRAHVSPLRKANRLLQREAV------AIYEAAKEVMLEALAQGGTS 216 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + VYG+T EPC + CG I R+V RS+ +C CQ+ Sbjct: 217 FDALYVNVNGESGYFARSLHVYGRTDEPCDT-CGGPISRVVLNARSSHFCPLCQR 270 >gi|225021994|ref|ZP_03711186.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] gi|224945280|gb|EEG26489.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] Length = 308 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 91/316 (28%), Positives = 137/316 (43%), Gaps = 40/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+ D+ +H F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTIADVAVHHPRAIRHVLGGEGEFRSEILGRSIIGLGRRG 60 Query: 58 KYLLIELEGNLSII---------------------VHLGMSGSFIIEHTSCAKPIKNPQH 96 K+L + L VHLGMSG +I+ ++ +H Sbjct: 61 KFLWLNLADPAVAAASASSGPTSQPTPQAGDQVVVVHLGMSGQMLIKDSNANSDDPKFKH 120 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNA 153 + + +NT ++ + D R FG+ LV+ L + + D Sbjct: 121 CRIQVRFDDNT-----QLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDPELKL 175 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 SEVASMMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPA------A 229 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG ++ Sbjct: 230 LKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPCD-RCGTILV 288 Query: 273 RIVQAGRSTFYCTYCQ 288 + RS+ YC +CQ Sbjct: 289 KEKFTNRSSHYCPHCQ 304 >gi|296393288|ref|YP_003658172.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] gi|296180435|gb|ADG97341.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] Length = 283 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHF-SAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + R F +AA + + V RR Sbjct: 1 MPELPEVEVVRRGLAEHLTGARIRALRVLHPRSARRHPGGGAFLAAALSERDVRAVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ S+++HLGMSG F + NP H V L + + + Sbjct: 61 KYLWLVLDDEESVVIHLGMSGQFRVGDQGVP---GNPAHLRVEADLADGRTLQFFDQRTF 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 F + E + P+ + +P D F+ + + K S +K LL+Q ++ Sbjct: 118 GGWEFAALQ--EVDGELVPAPVAHIARDPFDPKFDPAAVARRVRAKRSAIKRVLLDQTVL 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY E+LWRA+L + L +L+ + VL ++I GG+S Sbjct: 176 SGVGNIYADESLWRARLHGEQPAAGLSPRKT------AELLDALAVVLGESITEGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G F + +VYG+ G+PC CG IRR RS+ YC CQ+ Sbjct: 230 SLYVNVNGESGRFSDWLAVYGQEGKPC-RRCGSAIRREAFMNRSSHYCPRCQR 281 >gi|37912918|gb|AAR05254.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine proteobacterium ANT32C12] Length = 269 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + T+ +H +NLR+ +F + T+ + I +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINKF-SQSTLKSTKIHNRNLRWKVVENFESLTKNQSINKISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ +II+HLGMSGS I + +K H+H ++YNDPR Sbjct: 60 IFHLDNI-NIILHLGMSGSLRISKNNDNFFLK---HDHAEFIFDEEK------IVYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ ++ LGPEP FN L K N+K+ L+NQK V GI Sbjct: 110 RFGSIHLA--DNLDEHRLIKNLGPEPLSKDFNPNDLHKITAKSKINIKSLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A+++P R L + K+ +K+L AI GG++L+D+ Sbjct: 168 GNIYASESLYLAQINPNRVASDLTIED------CKKITLSAKKILNAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ + YG+ G C C +I ++V R+TF+C CQ Sbjct: 222 SADGSPGYFKFELNAYGREGLEC-KKCKTLITKVVINTRATFFCGSCQ 268 >gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689009|sp|B1VYY1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ S++ HLGMSG ++ + +H + + + T + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVRPADAP----DEKHLRIRMRFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPETIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|166215635|sp|A0QV21|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 149/295 (50%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P +A +I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ I++ +H + L + T + + Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLLGP------IRDTRHLRIAAVLDDGT-----ALSFV 109 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG +V P+ + +P D F+ + K+S +K LL+Q Sbjct: 110 DQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR K++ R + P+ L +L+ +V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADEALWRTKINGARIAAA------LPRRRLAELLDAAAEVMTDALGQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSFYCPRCQ 277 >gi|333024193|ref|ZP_08452257.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332744045|gb|EGJ74486.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 284 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + +R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHLAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+ G +++ HLGMSG +++ + H V I + T + + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAER----HLRVRIGFEDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T L + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTAGLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|239982551|ref|ZP_04705075.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291454393|ref|ZP_06593783.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] gi|291357342|gb|EFE84244.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] Length = 286 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +V + +R F+ G + RR Sbjct: 1 MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ ++ HLGMSG +++ + +H V + ++ T + + Sbjct: 61 KYLWLPVDDAPFAVLAHLGMSGQLLVQPGEAP----DEKHLRVRLRFADDLGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T + + +P D F+ ++ + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+D GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYDRPTATLTRPRS------AELLTHIRAVMTAALDVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG IRR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPCD-RCGTPIRRRPWMNRSSYFCPRCQR 280 >gi|332139465|ref|YP_004425203.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693292|sp|B4S2C6|FPG_ALTMD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|327549487|gb|AEA96205.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 269 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P + G+K+ V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITRVVVRERRMRWPIPQEVAK-VEGQKVTAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S H+HV I L+ + +NDPR Sbjct: 60 LIET-AQGTLILHLGMSGKLRVIDASTPVIK----HDHVDIVLSTGKC-----LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + P L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGAVLY--QAPDTHIPMLDNLGPEPLTDDFDDTRLFTLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAAGNISAAR------YKSLTATIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC + CG+ I V R+TF+CT CQ+ Sbjct: 222 QTDGKPGYFAQHLNVYGRKGEPCEA-CGKAIESKVIGQRNTFFCTRCQR 269 >gi|22299109|ref|NP_682356.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] gi|24636849|sp|P59065|FPG_THEEB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22295291|dbj|BAC09118.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] Length = 284 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 134/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ + R P F R + I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRAIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T H V + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTTPQP----PCPHTRVRWFF-----PTRAELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTLTPEQ------VQRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|302342357|ref|YP_003806886.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] gi|301638970|gb|ADK84292.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] Length = 272 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + ++ F+ GK I +R K L Sbjct: 1 MPELPEVECVRRTLEPAVLGRAIVAVQINYAKAVLPDARAFADGLGGKSITATARHGKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ + +HL M+G I+ A H H I L + + + Y D R Sbjct: 61 ILGLDQGAFMTIHLRMTGQVIV-----ADQAPQADHIHARIDLDDGQS-----LFYRDMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ + Q PL +GP+ + A + LKN LL+Q+++AG+ Sbjct: 111 KFGRLNYCPDAQALQNGPLANMGPDALE--LEAEAFATLVGARGGKLKNVLLDQRVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA LSP+ D L +L + +++ L++A++ GGSS+R+++ Sbjct: 169 GNIYADESLHRAGLSPL------ADPRALSADDLDRLHRALRQTLLEALEQGGSSVRNFM 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ++ VY +TG+PC CGQ + RIV AGR T +C CQ Sbjct: 223 DAHGRAGTFQHSHRVYRRTGQPC-PVCGQPVERIVVAGRGTHFCPACQ 269 >gi|148656079|ref|YP_001276284.1| formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] gi|166198744|sp|A5UUN1|FPG_ROSS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148568189|gb|ABQ90334.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] Length = 273 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV++ +L + + + + + + P F G+++ RRAK Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++L+ L+G ++ +HL MSGS ++ +H H+ + L + +V + D Sbjct: 61 WILLFLDGGWTLALHLRMSGSLTVQPADAP----PDKHTHLVLRLDDGR-----QVFFRD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG L++ + EP N+F L + +K LL+Q ++A Sbjct: 112 PRKFGRARLLDADGRAALDAAHG--DEPLSNAFTVERLAELLRGRKRAIKPLLLDQAVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EALWRA++ P+R L + + L I+ L A+ GGS+LRD Sbjct: 170 GIGNIYADEALWRARIHPLRPASDLSADE------VAALHDGIRAALRQALTNGGSTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G+ G Q+ F+ Y + G+PC CG I + V A R T YC CQ+ Sbjct: 224 YRNSYGTRGTNQDHFNAYDREGQPC-PRCGATIIKTVVAQRGTHYCPECQR 273 >gi|169632504|ref|YP_001706240.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii SDF] gi|229464467|sp|B0VRV3|FPG_ACIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169151296|emb|CAO99994.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii] Length = 274 Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FEQDQMLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ E C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAREMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|300780911|ref|ZP_07090765.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300532618|gb|EFK53679.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 278 Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + T + + + G + RR K++ Sbjct: 1 MPELPEVEVVRRGLDTHIVGSTFDTVEVLHPRAVRGNDVDLTEILPGLSVTGTGRRGKFM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +EL +++VHL MSG I+ H + L + + + + + D R Sbjct: 61 WLELSDGAAVMVHLRMSGQMIVGEPGLVDSP----HLRIRA-LMHGVGSAPFELDFIDQR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG + + + P+P + F+ + KKN +K LL+Q +V+GI Sbjct: 116 TFGS-WQYTQLIDGIPAAIPHIAPDPFETDFDPVATARAIRKKNVAIKTVLLDQSVVSGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 G+IY EA+W A + P RK R+L Q + +L++E + V+ A+ AGG+S Y Sbjct: 175 GSIYADEAMWAAWIKPTRKGRALRQRDAV------RLLEESRAVMARALQAGGTSFDSLY 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+++G+ GYF + + YG+ EPC CG I R V GRS+++C CQ Sbjct: 229 VNVNGASGYFSRSLNAYGQADEPCA-RCGTPIARTVVNGRSSYFCPVCQ 276 >gi|47779378|gb|AAT38607.1| predicted formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium eBACHOT4E07] Length = 269 Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + +I +H +LR+ + S ++ K I ++SRRAKY+ Sbjct: 1 MPELPEVETTVRAISKF-QNKILKEIIVHNAHLRWKVDKNISQLSKNKLIKEISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSG I++ K H+H+ + K ++++ND R Sbjct: 60 LIHFNDSS-LMIHLGMSGKLRIQNIGNNFFKK---HDHIELIFD------KEKIVFNDTR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + LG EP FN YL KN ++K +++QK+V G+ Sbjct: 110 RFGSIHFTK--SFKNHRLIENLGVEPLSREFNKDYLFEICRIKNISIKKLIMDQKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P R ++ + L I++VL AI GG++L+D+ Sbjct: 168 GNIYASESLFLAKIKPNRLSKKISLKECDQ------LTNAIKRVLRYAIRKGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF +VY + E C NC I+++ R++F+C CQ Sbjct: 222 SADGSEGYFNLNLNVYDREDENC-KNCKSKIKKVTIGQRASFFCDSCQ 268 >gi|296533913|ref|ZP_06896439.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] gi|296265767|gb|EFH11866.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] Length = 280 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 166/294 (56%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ T+T +R+ +R+ FP +A G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLSRLLLGRTLTLAATNREGMRWPFPPGLAARLTGARVESFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G S+++HLGMSG + + P H H+ + + RV + DPR Sbjct: 61 LMRLSGGDSVLIHLGMSGRMVARPVGSN--LPPPPHEHLVMQTDDGQ-----RVGFADPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + L +GPEP + F L K + +K ALL+Q++VAG+ Sbjct: 114 RFGSVDLVPTAAEDGHKLLAGMGPEPLEEGFTPGILASALTGKKTPIKAALLDQRVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA LSP R ++ KL+ I+ VL +AI+AGGSSLRDYV Sbjct: 174 GNIYVAEALFRAGLSPRRLAHTIPGAR------AEKLVPAIKAVLEEAIEAGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +G+FQ+ F VY + G PC C + RIVQ+GRSTFYC Q+ Sbjct: 228 QADGELGHFQDRFHVYDREGAPCPLCPGPPTCRG-VSRIVQSGRSTFYCARTQR 280 >gi|126695693|ref|YP_001090579.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9301] gi|166198727|sp|A3PB53|FPG_PROM0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126542736|gb|ABO16978.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9301] Length = 292 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 140/300 (46%), Gaps = 19/300 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + + F + I RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTVAYPSNKEEFIKGLKNSLIYKWDRRGK 60 Query: 59 YLLIELEGNLSIIVHL----GMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKK 111 YL+ +L+ + + F++ H T K I+N H + + Sbjct: 61 YLIAQLKEVQNENTEFPLENSQNNGFLVVHLRMTGYFKFIENSTHPCKHTRIRF-FDKNN 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y D R FG M + L L +LGPEP FNA YL K+ ++K Sbjct: 120 NELRYVDVRSFGQMWWINKDLSINKVIKGLGSLGPEPFSKDFNANYLKEAISKRTKSIKA 179 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q IVAGIGNIY E+L+ A +SP R+ R+ K+ L KL + I VL +I Sbjct: 180 ILLDQTIVAGIGNIYADESLYSAGISPFREART------IKKNELIKLKKSIVIVLKKSI 233 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +GG++ D+ ++G G F +VY +TG C CG +I R GRST +C CQK Sbjct: 234 GSGGTTFSDFRDLEGENGNFGLQTNVYRRTGREC-RKCGNLIERQKITGRSTHWCPNCQK 292 >gi|172040469|ref|YP_001800183.1| hypothetical protein cur_0789 [Corynebacterium urealyticum DSM 7109] gi|238066642|sp|B1VG60|FPG_CORU7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171851773|emb|CAQ04749.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 289 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 21/298 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + D+ + P A G +I + RR Sbjct: 1 MPELPEVEVVRRGLEEHLSDGVIHDVDVRHPRAVRAQPGGAAELVALLDGARIQSIERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KY+ + L ++ VHLGMSG +I S HV IS + K + + Sbjct: 61 KYMWLVLNNGRALFVHLGMSGQMLIHEASDPALPT----THVRISARVDVGEKDLVLSFV 116 Query: 118 DPRRFGFMDLVETSLKYQYPPL------RTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 D R FG + + P+P + F+ + + K +++K A+ Sbjct: 117 DQRTFGQWQVTPVVADPHGGFTGVPVPVAHIAPDPFEAVFDPAVVARRLRAKKTDVKRAI 176 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+GIGNIY EALW A ++P R+TR + Q + ++++ V+ A+ Sbjct: 177 LDQTLVSGIGNIYADEALWAAGVAPSRRTRGMRQRDAV------AVLEQAGAVMRRALAQ 230 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + + YG+ G+PC CG+ I R+ RS+ +C CQ Sbjct: 231 GGTSFDSLYVNVNGASGYFARSLNAYGRAGKPC-PRCGEPIVRVQWTNRSSHFCPQCQ 287 >gi|123967891|ref|YP_001008749.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. AS9601] gi|166198730|sp|A2BPD1|FPG_PROMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123198001|gb|ABM69642.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. AS9601] Length = 292 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 139/304 (45%), Gaps = 27/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F R I RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEICRYSTVAFPTNKEEFIKGLRNSLIYKWDRRGK 60 Query: 59 YLLIELEGNLSIIVH----LGMSGSFIIEHTSCAKPIK-------NPQHNHVTISLTNNT 107 YL+ +L+ + + F++ H K +H V NN Sbjct: 61 YLIAQLKEVQNEHTQLPLENSQNNGFLVVHLRMTGYFKFIENSSNPCKHTRVRFFDKNNN 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + Y D R FG M + L L +LGPEP FNA YL K+ Sbjct: 121 -----ELRYIDVRSFGQMWWINNDLSLNKIIKGLGSLGPEPFSKDFNANYLKKVISKRTK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R+ K+ L KL + I VL Sbjct: 176 SIKAILLDQTIVAGIGNIYADESLYSAGISPFREART------IKKNELIKLKESIVTVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I +GG++ D+ ++G G F +VY +TG+ C CG +I R GRST +C Sbjct: 230 KKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERQKITGRSTHWCP 288 Query: 286 YCQK 289 CQK Sbjct: 289 KCQK 292 >gi|315178473|gb|ADT85387.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii NCTC 11218] Length = 267 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 99/276 (35%), Positives = 140/276 (50%), Gaps = 20/276 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + TV + LR+D P G+ I +SRRAKYL+IE S IV Sbjct: 2 GISPHLVGETVRSLTFRTPKLRWDIPAEL-KQMEGQVITAISRRAKYLMIET-SVGSAIV 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS + +H+HV ++LTN + YNDPRRFG Sbjct: 60 HLGMSGSLRVLDGDFP----PAKHDHVDLTLTNGK-----VLRYNDPRRFGAWLWCPAGE 110 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 ++ PEP + FNA YL H+ KK +K+ +++ KIV G+GNIY E+L+ A Sbjct: 111 HHEVLGHMG--PEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGVGNIYANESLFSA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P+R SL + T L+ +I+ VL AI GG++L+D+ DG GYF Sbjct: 169 HIHPLRPAHSLSEAEWTS------LVADIKAVLTTAIAQGGTTLKDFAQADGKPGYFAQE 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VYGK G+PC CG+ I + R++F+C CQ Sbjct: 223 LQVYGKKGQPC-PRCGEPIAELKIGQRNSFFCLQCQ 257 >gi|262369235|ref|ZP_06062563.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] gi|262315303|gb|EEY96342.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] Length = 284 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 152/288 (52%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ + V I + + +LR+ P S G+++I + RR+KY+ Sbjct: 1 MPELPEVETTKASLAPLL-DQQVLSIEVRQSSLRWPIPADLSK-LVGQRLIQLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +++ HLGMSGSF I H+H+ I + + Y+DPR Sbjct: 59 LA-VFEQDTMLWHLGMSGSFRICEVGETLRK----HDHLIIRFED------VELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q + TLGPEP FNA YL+ + K +K A+++ +V G+ Sbjct: 108 RFGCILWL--DEYSQTKLIDTLGPEPLSADFNAEYLSQKLKNKQVGIKVAIMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + SL + + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNLGIHPAQVASSLTHDQ------IEKLVVEIKRILQQAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|297559195|ref|YP_003678169.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843643|gb|ADH65663.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 284 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + P F+A G+ RR Sbjct: 1 MPELPEVEVVRRGLAEHALGRTVGAVEVLHPRAVRRYLPGPADFAARLSGRVPTAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +++ H V + L++ T + + Sbjct: 61 KYLWLVLDNGEMLLTHLGMSGQMLVQPEGKPDER----HLRVRLPLSDGT-----ELRFV 111 Query: 118 DPRRF-GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R F M V + + + +P D F A + + +K ALL+Q + Sbjct: 112 DQRTFGHLMVDVPGVREDVPSSVDHIALDPLDPDFVAEDFVRALRARRTEVKRALLDQSL 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R TR L +L+ + +V+ +A++ GG++ Sbjct: 172 ISGVGNIYADEALWRSRLHWARSTRELSDAEAV------ELLGHVGQVMNEALEVGGTTF 225 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF+ + YG+ PC CG +I R RS++ C CQ+ Sbjct: 226 DGLYVNVNGESGYFERGLNAYGRRDRPCG-RCGALIVREAFMNRSSYSCPTCQR 278 >gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] Length = 273 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I L ++ ++ DI L + + F G+K++DV RRAK L Sbjct: 1 MPELPEVETIAAGLAPLVSGRSIRDIFLMQARVVRGDELEFQRRLLGRKVLDVRRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+G L ++ HL M+G + ++ +H H+ + L + V ++D R Sbjct: 61 ILDLDGPLHLVFHLKMTGKVWVPDKG----VQPGKHTHLILDLGDE-----VYVFFDDQR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + + R LGPEP ++ T F + + +K+ LL+Q+++AGI Sbjct: 112 RFGYVTALTPPELESWDFYRGLGPEP--LHLSSQDFTDIFQGRKARIKSLLLDQQVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L + L L +Q+VL +AI AGGSS RDY Sbjct: 170 GNIYADEALYMAGIHPCTRAVDLSGDQ------LEALHCSLQQVLQEAIQAGGSSFRDYR 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ F VYGK G PC CG + AGRS+ +C CQ Sbjct: 224 NALGVAGLFQENFKVYGKKGLPC-PECGANLESTKVAGRSSCFCPQCQ 270 >gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302433947|gb|EFL05763.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 137/296 (46%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TV + + H + +R F+ G I RR Sbjct: 1 MPELPEVETVRAGLEAHVAGRTVRAVEVLHDRAIRRHAQGAADFTGRLAGVAIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ + +H V + + + + Sbjct: 61 KYLWLELSDGEAVLAHLGMSGQMLVQPEGAP----DEKHLRVRVRFADG----GPELRFV 112 Query: 118 DPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L E + + +P D F+ + + +K ALL+Q Sbjct: 113 DQRTFGGLALDELVVVDGDSLPGTIAHIARDPMDPKFDPEAAVRALRSRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR+KL R T L G L+ V+ A+ AGG+ Sbjct: 173 TLVSGVGNIYADEALWRSKLHWSRPTEKLTAAQG------RTLLSAASDVMSAALLAGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF+ + YG+ G PC CG IRR RS+F C CQ+ Sbjct: 227 SFDALYVNVNGESGYFERSLDAYGQEGLPC-RRCGSPIRREPFMNRSSFSCPRCQR 281 >gi|116072678|ref|ZP_01469944.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] gi|116064565|gb|EAU70325.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] Length = 278 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 136/294 (46%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I + R F A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVERFVAGLKGAMVGAWSRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ + S VHL M+G F T A H V NN + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQWHATPAA----PCSHTRVRFWNQNNE-----ELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGNDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LVAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LVRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPIIREKLSGRSTHWCPSCQR 278 >gi|326330625|ref|ZP_08196929.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951466|gb|EGD43502.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 289 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 145/292 (49%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + + + + +R F+ +G+ + RR Sbjct: 1 MPELPEVEVVRAGLERHVLGARIVAVDVLHPRPVRRHLAGASAFADELKGRVLTGARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ + H V I L + + + Sbjct: 61 KYLWLPLDSGDALMAHLGMSGQMLVQPPASPDER----HLRVRIRLEGAAEGR--ELRFV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + + P+P + +F+A + + S +K LLNQ ++ Sbjct: 115 DQRMFGGLSISPGGAEL-PPEIAHIAPDPLEAAFDAEAVVRWVRRSASGIKRILLNQTVI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R L + +L+ + V+ +A+ GG+S Sbjct: 174 SGVGNIYADEALWRAKLHGERPGERLTA------PKVRELLGHVHDVMTEALAQGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ + + YG+ GEPC CG +RRI RS+++C CQ Sbjct: 228 ALYVNVNGESGYFERSLAAYGREGEPCD-RCGAPMRRIAFMNRSSYFCPTCQ 278 >gi|46199756|ref|YP_005423.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55981775|ref|YP_145072.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB8] gi|7531119|sp|O50606|FPG_THET8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81405496|sp|Q72HN2|FPG_THET2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2897751|dbj|BAA24892.1| mutM [Thermus thermophilus] gi|46197383|gb|AAS81796.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55773188|dbj|BAD71629.1| MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) [Thermus thermophilus HB8] Length = 267 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 153/290 (52%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+L Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQV-VHRDPARYRN----TALAEGRRILEVDRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG + ++ HLGM+G F +E T H + L + ++DPR Sbjct: 56 LFALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLE------GRTLYFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V + P L LGPEP +F + LK LL+Q++ AG+ Sbjct: 101 RFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Sbjct: 161 GNIYADEALFRARLSPFRPARSLTEEE------ARRLYRALREVLAEAVELGGSTLSDQS 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 263 >gi|227503343|ref|ZP_03933392.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] gi|227075846|gb|EEI13809.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + +T + + + GK+I +RR K++ Sbjct: 1 MPELPEVESVRHGVESYVVGKEITSVDIAHPRANRGQDEPLAGLIVGKEIAAAARRGKFM 60 Query: 61 LIELEGNLSIIVHLG-------MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E G + H MSG I HT H +T+ L++ T Sbjct: 61 WLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHTDSP-------HRRITVVLSDAT-----E 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ S +G +P + F+ + KK + +K ALL+ Sbjct: 109 LHFVDQRTFGYWLYAPWSTI------SHIGLDPLEPDFDIASAARRLRKKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A+ AGG Sbjct: 163 QTLVSGIGNIYADEALWAARISPRKKASALRQKDAV------ALLAAAQTVMSAALKAGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +CQ Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHCQ 271 >gi|120612253|ref|YP_971931.1| formamidopyrimidine-DNA glycosylase [Acidovorax citrulli AAC00-1] gi|120590717|gb|ABM34157.1| DNA-(apurinic or apyrimidinic site) lyase [Acidovorax citrulli AAC00-1] Length = 271 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + L K+LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIADAVAGAVIESVVLG-KSLRWPLGRA-PEDLHGLRVVAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS + ++ A H+H + T + + DPR Sbjct: 59 LLDL-DRGMLLIHLGMSGSLRFDRSADA----PGAHDHFLM------ATSRGTLRLKDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + ++ L LG EP ++F +K LL + V G Sbjct: 108 RFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTARASSIGPLR------ARRLHEAIRAVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 222 AGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|160900861|ref|YP_001566443.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] gi|160366445|gb|ABX38058.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] Length = 276 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + L + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRRAFAAQIAGARIESVALGKP-LRWPL-GIAPELLAGRDVHGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL L +++HLGMSGS A H+H + T K + +DPR Sbjct: 59 LMELSEGL-LMLHLGMSGSLRFVAPHEAPLGPAGTHDH------FDLQTSKGLLRLHDPR 111 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V S + L LG EP D+SF+ + +K LLN +V G Sbjct: 112 RFGAVMYVAAESDPWARRLLDHLGMEPLDDSFSFETFRAGLKASRTPIKQLLLNGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ A+++P + + + +L +EI++VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFMARIAPTQPACEVGPR------KVRRLFEEIRRVLALAVEQGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG G+FQ VYG+ G PC CG ++ + Q RST++C CQK Sbjct: 226 SAPDGMAGHFQLQAKVYGREGLPCTH-CGSPVQMLRQGQRSTYFCARCQK 274 >gi|109896382|ref|YP_659637.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas atlantica T6c] gi|123361457|sp|Q15ZV5|FPG_PSEA6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109698663|gb|ABG38583.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudoalteromonas atlantica T6c] Length = 270 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + I + K LR+ P A G K+ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQHIEQIIVRHKQLRWWVPDDVHLA-EGHKVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + I +HLGMSG I ++ H+H+ I LTN + +ND R Sbjct: 60 FIDTDAGSII-LHLGMSGKLRIVNSETPVIK----HDHIDIVLTNGVC-----LRFNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LGPEP + F+ L KN +KN +++ K+V G+ Sbjct: 110 RFGACLWQRVGDPE-IGMIAALGPEPLTSDFDGQRLYDLSRTKNVPVKNFIMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P K L I++VL AI+ GG++L+D+ Sbjct: 169 GNIYANESLFIAGIDPR------KAAKKVSKKSYLALGDIIKQVLAKAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF VYG+ G+ C C I+ + R+TF+C CQK Sbjct: 223 QADGNPGYFAQHLRVYGRKGQAC-EVCESEIQSVTLGQRNTFFCEQCQK 270 >gi|197118515|ref|YP_002138942.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197087875|gb|ACH39146.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 269 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + LR P G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAIRSAKLRTMVPQELPRLLVGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + H+H + L + + ND R Sbjct: 61 II-TCRQGSLLLHLGMTGHLRLVPAGAG----AGVHDHFDLELES-----SLILRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ L+ +GPEP + YL + K + L+ L++ +VAG+ Sbjct: 111 RFGS-IHFTSGDPLKHKLLQGIGPEPLTDELTGPYLYRKSRGKKAPLQRFLMDSSVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P SL + + K A + D+ Sbjct: 170 GNIYAAETLFRCGMLPPTPAGSLSEADCDRLCDCIK--------KTLAASIEAGRVMDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTFYC CQ Sbjct: 222 VREEKLVYFPQQLFVYGREGLAC-RQCGSAIERGRLGNRSTFYCPRCQ 268 >gi|13357975|ref|NP_078249.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762015|ref|YP_001752497.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508489|ref|ZP_02958019.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|24211711|sp|Q9PQ76|FPG_UREPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|11264463|pir||B82895 formamidopyrimidine-DNA glycosylase UU413 [imported] - Ureaplasma urealyticum gi|6899401|gb|AAF30824.1|AE002138_11 formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827592|gb|ACA32854.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675912|gb|EDT87817.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 275 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYEQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L N K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKN------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] Length = 306 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L +++ + + + + + F G+ SRR KYL Sbjct: 1 MPELPEVETVVRTLELLIPDRRIEHVEVRVPKMIQMDAGEFCRRLEGQHFRRFSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++ I H+ M G F ++ H HV L + T ++ Y+D R Sbjct: 61 IFQ-MDDVYFIAHMRMEGKFYVQRPEEPLSK----HIHVIFDLDDGT-----QLRYHDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+E + ++ PEP D+ FN Y K+ +K LL+Q VAGI Sbjct: 111 KFGTMELMELNGDLRHFHELG--PEPFDDEFNPDYCRAFLKKRRVPIKQVLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + ++ P ++ L + T + + I + AI+AGGSS+R Y Sbjct: 169 GNIYANEICFALRIDPRKRCDQLTKAQITALPEITRQILSL------AIEAGGSSIRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+G+ GE C CG I++I A R T+YC +CQK Sbjct: 223 SSLGVTGRFQLQIQVHGREGEAC-PLCGGPIKKIAVAQRGTYYCPHCQK 270 >gi|299531517|ref|ZP_07044923.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] gi|298720480|gb|EFI61431.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] Length = 279 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGARIEKATLGKP-LRWPL-GLLPQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDH------FDLQTSRGLLRLHDPR 111 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V L LG EP + F S +K LL+ +V G Sbjct: 112 RFGAVIYVPDEGDVLARKLLDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + + L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPATPARD------VGRRKVKVLYEAIRSVLALAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG I+ + Q RST+YC CQK Sbjct: 226 SAANGMEGHFQLEAQVYGRDGLPCSH-CGAAIQLMRQGQRSTYYCARCQK 274 >gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS] gi|123369434|sp|Q1BAM5|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215637|sp|A1UED7|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS] Length = 296 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 139/300 (46%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP-----IKNPQHNHVTISLTNNTNTKKY 112 KYL + L+ + S ++ H + I H + + T Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAALFDDGT----- 115 Query: 113 RVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D R FG DLV P+ + +P D F+ + K+S +K Sbjct: 116 ALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGKHSEIKR 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +V+GIGNIY EALWRAK++ R SL K L +++ V+ DA+ Sbjct: 176 QLLDQTVVSGIGNIYADEALWRAKVNGARLAESLT------KPKLAEILDHAADVMRDAL 229 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 230 GQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSFYCPRCQ 288 >gi|148244469|ref|YP_001219163.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] gi|166198755|sp|A5CX90|FPG_VESOH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146326296|dbj|BAF61439.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] Length = 269 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E I+R L ++ N V LHR+NLR+ P H S + I + RR KYL Sbjct: 1 MPELPEIETIKRGLTSLIINQKVNKAILHRENLRWVIPKHLSTTLTNQLISTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++I+HLGMSGS + +T+ H H + L N T+ + DPR Sbjct: 61 LI-KFKVGTLIIHLGMSGSIKVVNTNTPLLK----HEHFELQLKNGTS-----MRLKDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V S + L +LG EP SF YL + K N+K +++ KIV G+ Sbjct: 111 RFGA---VLFSKDGSHKLLDSLGVEPLKTSFYDGYLYQKSRNKQQNIKAFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A ++P K S+ + K +L AI+AGG++L+D+V Sbjct: 168 GNIYACESLFMAGINPKLKAGSISKTRYNVLTQCIK------NILTQAIEAGGTTLQDFV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G+ GYF SVYG + C C +I + VQ RSTFYC CQ Sbjct: 222 QVNGNPGYFTQNLSVYGCKNKKCY-RCKGIIIKFVQNQRSTFYCKKCQ 268 >gi|262371760|ref|ZP_06065039.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] gi|262311785|gb|EEY92870.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] Length = 273 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 158/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V I ++ +LR+ P+ + G++++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLE-QRVQSIQVYNSSLRWPIPNDLNK-LIGQRLMALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGMSGSF + + + +H+H+ I + + Y+DPR Sbjct: 59 LAE-FERDQMLWHLGMSGSFRLCEAN----EELRKHDHLVIDFEDQQ------LRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + + TLGPEP ++FNA+YL + KN +K AL++ V G+ Sbjct: 108 RFGCILWLDQNNQE--KLIDTLGPEPLSDAFNAVYLFEKLSNKNVGIKIALMDNHNVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + L+ E++++L AI+ GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPASTLSLVQ------IESLVIEVKRILKHAIELGGSTLRDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS] gi|166215636|sp|A3PXU1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. JLS] Length = 296 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 141/300 (47%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP-----IKNPQHNHVTISLTNNTNTKKY 112 KYL + L+G + S ++ H + I H + L + T Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAALLDDGT----- 115 Query: 113 RVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D R FG DLV P+ + +P D F+ + K+S +K Sbjct: 116 ALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGKHSEIKR 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +V+GIGNIY EALWRAK++ R SL K L +++ V+ DA+ Sbjct: 176 QLLDQTVVSGIGNIYADEALWRAKVNGARLAESLT------KPKLAEILDHAADVMRDAL 229 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 230 GQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSFYCPRCQ 288 >gi|323143805|ref|ZP_08078472.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] gi|322416397|gb|EFY07064.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] Length = 272 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +K+ + + K LR +G K++ + RR KY+ Sbjct: 1 MPELPEVEVTMRGVSPALKDSVIKSVFKGEKKLRIPLSDDLYQ-LQGAKVLSLQRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ SIIVHLGMSG + + H+H ++L N + V NDPR Sbjct: 60 IV-TTTKGSIIVHLGMSGHLKVVDHEAPFIL----HDHFALALDNGKD-----VRLNDPR 109 Query: 121 RFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V E + L+ LGPEP ++FNA YL + K++ +K A+++ K+V G Sbjct: 110 RFGLVAYVKEGNDPLASEVLKNLGPEPFSDAFNADYLYNTLKKRHIAVKQAIMDSKVVVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A++SP+R ++ + KL++ I+K+L ++I GG+++RD+ Sbjct: 170 VGNIYASESLFLAEISPLRSASTITREE------CEKLVEVIRKLLHESIKKGGTTIRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +VYG GE C CG I VQ R T++C +CQ Sbjct: 224 SGADGKPGYFVQNLNVYGHEGEKC-PRCGHPILGTVQGQRHTYFCGHCQ 271 >gi|297170281|gb|ADI21318.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_09F21] Length = 269 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + +KN + I + +LR KKII+V R+ KY+ Sbjct: 1 MPELPEVETTKRGVEPFLKNKIIKRIEVRNSSLRVPVNKTKLKKIINKKIIEVGRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L II+HLGMSG+ + + +H+HV + L + +I+ND R Sbjct: 61 FLQLNDESKIIIHLGMSGTLRVHNKFQKL-----KHDHVILELETGQS-----LIFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG LV + ++ P + Y ++ S LK LLN KI++GI Sbjct: 111 RFGLFHLVLKNEEFSMFENNGPDPLSQKD---GKYFYNKIKNSRSTLKALLLNNKIISGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++LSP ++ + + K++ AI GG++L DY Sbjct: 168 GNIYASEILFLSRLSPKKRGNKVTKIQCDEIIKFSKIVLNR------AIKFGGTTLNDYH 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + GYF+ +VY + GE C C I +I Q RST++C CQ Sbjct: 222 NAENKPGYFKIKLNVYDREGEEC-KECKSKIFQIRQNNRSTYFCKNCQ 268 >gi|171920356|ref|ZP_02931689.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902783|gb|EDT49072.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 275 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL +F K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKFKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L + K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKD------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|307329835|ref|ZP_07608990.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] gi|306884564|gb|EFN15595.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] Length = 310 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 18/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ + +R P F+A RG++ V RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60 Query: 58 KYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + + + +++ HLGMSG +++ + +H + + + T+ V Sbjct: 61 KYLWLPFDDDAAAEAVLAHLGMSGQLLVQPAEAP----DEKHLRIRVRFADAAGTELRFV 116 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D V L+ + + +P D +F+ ++ + +K ALL+Q Sbjct: 117 DQRTFGGLSLHDTVPGDLEGLPDAIAHIARDPLDPAFDEAAFHTALRRRRTTIKRALLDQ 176 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ GG+ Sbjct: 177 SLISGVGNIYADEALWRARLHYDRPTATLARPR------AAELLGHVREVMTAALAVGGT 230 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF+ + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 231 SFDSLYVNVNGESGYFERSLDAYGRENEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 285 >gi|254455806|ref|ZP_05069235.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] gi|207082808|gb|EDZ60234.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] Length = 287 Score = 182 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 171/300 (57%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+R++L +K V + + +NLRF P +FS+ KKII V R +KYL Sbjct: 1 MPELPEVEIVRQSLNKKIKQKKVKKVIVRNRNLRFKIPLNFSSYFENKKIIKVERFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS----------CAKPIKNPQHNHVTISLTNNTNTK 110 ++ L ++ ++HLGMSG+ I P +HNHV I Sbjct: 61 ILYLSKSIYCLIHLGMSGTIHIIENKMNNIITNTSFYNSPTLPKKHNHVEIIFE------ 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 K++V+YNDPRRFGF +++ + LGPEP D +F+ Y+ + F KN ++KN Sbjct: 115 KFKVVYNDPRRFGFFQIIKNKKNLKERF-NHLGPEPFDLNFDLNYVYNYFKYKNRDIKNL 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK ++G+GNIY E L+++K+ P RK K+ K+I +K+L+ AI Sbjct: 174 LLDQKFISGVGNIYASEILFKSKIHPYRKVC------FLSKEECKKIILNSKKILLKAIS 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ + GS G FQN F VY + G C + C +I++ + + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNTSGSKGGFQNEFKVYQQQGMKCKNFRCTDLIKKKISSNRSTFFCESCQK 287 >gi|222084647|ref|YP_002543176.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] gi|221722095|gb|ACM25251.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] Length = 279 Score = 182 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 137/280 (48%), Positives = 183/280 (65%), Gaps = 11/280 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + L R +LRF FP FS G+ I +SRRAKYLLI+L+ ++II HLGMS Sbjct: 1 MEGAVLAALELRRNDLRFPFPAEFSRLASGRGITSLSRRAKYLLIDLDDGMTIIAHLGMS 60 Query: 78 GSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF +E + A+ K+ +H+HV LT RVIYNDPRRFGFMD+ Sbjct: 61 GSFRVETGAVAETPGEFHHPRSKDEKHDHVIFHLTGANG--PARVIYNDPRRFGFMDIAR 118 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P R LGPEP N+ +A YL +F K LK+ALL+QK +AG+GNIYVCEAL Sbjct: 119 RADLGSHPSFRDLGPEPTGNTLSADYLAERFSGKAQPLKSALLDQKNIAGLGNIYVCEAL 178 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WR+ LSP+R SL+ G P + L +L++ I++V+ DAI AGGSSLRD++ DGS+GYF Sbjct: 179 WRSHLSPVRAAGSLVTQAGRPSEELLRLVEAIREVIADAIAAGGSSLRDHIQTDGSLGYF 238 Query: 250 QNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q++FSVY + +PC CG + RIVQ+GRS+FYC CQ Sbjct: 239 QHSFSVYDREAQPCGTPGCGGTVARIVQSGRSSFYCASCQ 278 >gi|302391164|ref|YP_003826984.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] gi|302203241|gb|ADL11919.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] Length = 275 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + +TD+ + + L + F G +I D+ RR KY Sbjct: 1 MPELPEVQTVVDTLTESVLKKEITDVEVKNEKLIANLEVEEFIDTLTGSRIEDIRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +++EL+ + ++ HL M+G F+ C K + +++++ N + Sbjct: 61 IIMELDTDYYLVTHLRMTGRFVY----CQKKEEVDKYDYIFFKFKGND-----ELRLGSK 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F LV + + L LGPEP + F + +K LLNQK +AG Sbjct: 112 RKFTRTYLV--ADLKEAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPLLLNQKFLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ +++ P+R +L + KL Q IQ+VL + I+ G++ DY Sbjct: 170 LGNIYVDEALFISQIHPLRTADTLTDQE------IKKLYQAIQQVLAEGIEHRGTTKWDY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G +QN VY + GE C + C ++++I GR T++C CQ Sbjct: 224 VDASGEAGSYQNYLRVYDRKGEEC-NRCAAILKKIKVGGRGTYFCPQCQ 271 >gi|186701833|ref|ZP_02971501.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701121|gb|EDU19403.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 275 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L N K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKN------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|94970892|ref|YP_592940.1| formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94552942|gb|ABF42866.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 272 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L T+ + + K + G KI V R K+ Sbjct: 1 MPELPEVETVANGLNKRAAGTTIESVWIGEKKQPLKSSARAIAKMLEGAKITLVRRVGKH 60 Query: 60 L-----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + E I+HLGM+GS ++ P+H H+ L++ + Sbjct: 61 IVADLAEPDGEPRGQWIIHLGMTGSTLVVDPDTPL----PKHTHLIAKLSSGK-----EL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + DPR FG + + S + P + + F +N+ +K+ALLNQ Sbjct: 112 RFVDPRMFGKLAVRAKSDVFAAPG-------LEPLTVSLEDFQKLFRGRNTPIKSALLNQ 164 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EAL+RA + P R+ +SL + + L +L +++ +VL +A++ GGS Sbjct: 165 ALLSGVGNIYADEALFRAGIRPRRRAKSLSRAD------LTRLHEKVGEVLREAVELGGS 218 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+ DYV +G+ G+FQ +VY +TGEPC + C + I+R+V AGRS+ YC CQK Sbjct: 219 SVNDYVDAEGNEGFFQLRHNVYQRTGEPCFT-CKKPIKRVVIAGRSSHYCQNCQK 272 >gi|290969142|ref|ZP_06560667.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] gi|290780648|gb|EFD93251.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] Length = 280 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + + ++ N L+ F GK+I + RR KY Sbjct: 1 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPNVLKNTTVPGFRNRVVGKRIEGLVRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L G +++VHL M+G + + + +K ++Y D Sbjct: 61 LQFLLSGEQAVLVHLRMTGKLLYRPALQEE-----------PRARLRLHLQKGLLVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG LV + P TLGP+ A +F A YL K +K LL+Q +VAG Sbjct: 110 RTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQHVVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P R+ ++ + + KL I +VL + GG+++RD+ Sbjct: 170 LGNIYVDEALFAAHIRPDRQAATISRTE------VGKLHAAIGRVLAQGLAHGGTTIRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q+ VYG+ G PC +CG + +GR T YC +CQ+ Sbjct: 224 VDSNGREGTNQSFLQVYGREGMPC-PHCGTRLVYTKVSGRGTRYCPHCQR 272 >gi|319440518|ref|ZP_07989674.1| hypothetical protein CvarD4_02017 [Corynebacterium variabile DSM 44702] Length = 290 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 30/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + P A +I + RR Sbjct: 1 MPELPEVEVVRRGLAEHITGATIVGTEVLHPRAVRGQPGGAAALEAGLEDARITALRRRG 60 Query: 58 KYLLIELEGN-----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL I+LE ++VHLGMSG ++ H + L + Sbjct: 61 KYLWIDLEYPRGGQGSGQSSGRCLLVHLGMSGQMLLGEPGQVTSP----HLRIRSLLVTD 116 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T ++ + + D R FG E + P+ + +P D +F+A + KK S Sbjct: 117 TG-RELELSFVDQRTFGRW---ELTAPGVTDPVPHIAVDPLDAAFDAAHTARVIRKKRSE 172 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q +V+GIGNIY EALW A++ P +K ++ Q + + L+ +V+ Sbjct: 173 IKRVLLDQTVVSGIGNIYADEALWAAQVHPRKKATAMRQTD------VISLLDAATEVMT 226 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A+ AGG++ D YV+++G+ GYF + +VYG+ GEPC CG + R RS+ +C Sbjct: 227 RALAAGGTTFDDLYVNVNGASGYFSRSLNVYGREGEPC-PRCGTPVVREQWTNRSSHFCP 285 Query: 286 YCQK 289 CQ+ Sbjct: 286 ECQR 289 >gi|242277525|ref|YP_002989654.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] gi|259647331|sp|C6BUX8|FPG_DESAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|242120419|gb|ACS78115.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] Length = 274 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L ++ T+ + + + + FS+ G+KI + RRAK L Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSVKMPWYLFSSRVAGEKITRIHRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L +L I HL M+G + H + LT+ + + ++D R Sbjct: 61 IMDLGDDLHITFHLKMTGRVLAHEGPT----TPEPHTRIVFGLTDGGS-----IEFHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + + ++ + LGPEP + A L + + + +K LLNQ +VAG Sbjct: 112 KFGEVRALNNEELQEWDFYKNLGPEPLEV--TAEELAERITGRKAQIKGLLLNQSVVAGC 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+ + P K L L KL E+Q VL AI GSS+RDYV Sbjct: 170 GNIYADESLFRSGIHPKAKASDLSNE------SLVKLFTELQAVLKQAIQENGSSIRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN+F VYGK GEPC +CG++ AGR++ +C+ CQK Sbjct: 224 DAGGDAGGFQNSFKVYGKKGEPC-PDCGKIFEGATVAGRTSTFCSNCQK 271 >gi|290953522|ref|ZP_06558143.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] gi|295313214|ref|ZP_06803873.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] Length = 270 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKE------AANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +G GYF +VYG+ + C C I+ +V A R+TF+ Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFF 268 >gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylase [Mycobacterium vanbaalenii PYR-1] gi|166215640|sp|A1T737|FPG_MYCVP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119955982|gb|ABM12987.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium vanbaalenii PYR-1] Length = 293 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 144/306 (47%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + +H +R P +A I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGRTVTAVRVHHPRAVRRHEAGPADLTARLLDTTITGTGRRG 60 Query: 58 KYLL-----------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL E N +++VHLGMSG ++ + N H + L + Sbjct: 61 KYLWLTLGDGADEPLARRESNFALVVHLGMSGQMLLGD------VPNANHLRIAALLDDG 114 Query: 107 TNTKKYRVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG LV P+ + +P D F+ + +K Sbjct: 115 TT-----LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRDAVVKVLRRK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY E+LWRAK++ R + + L +L+ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADESLWRAKINGARLASGVSRA------KLAELLGAAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMTDALAQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|323699537|ref|ZP_08111449.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. ND132] gi|323459469|gb|EGB15334.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans ND132] Length = 272 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 147/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE+I R L + T+ + + R P G+ I V RRAK Sbjct: 1 MPELPEVEVIARGLDASVTGRTIESVEV-PGLTRLSEPEETLVPKVLGRTITHVRRRAKV 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+EL+ ++ HL M+G + A+ H+ + L + + + + D Sbjct: 60 LLVELDNGSTLAFHLKMTGRVVHGPKRAAQR-----HDRILFHLDDGS-----MLYFADM 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG++ + L GPEP + + A L + +N +K LLNQ +VAG Sbjct: 110 RKFGYVRCFAADELDCWDFLCKAGPEPLETAPEA--LAERVTGRNCAIKALLLNQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+RA ++P + + ++ +L +Q VL AI GSS+ DY Sbjct: 168 VGNIYADESLFRAGINPETRGSRVGRDRAV------RLFTALQAVLRQAIAENGSSISDY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQN+F+VYG+ GEPC CG+ +R + AGR++ +C CQ+ Sbjct: 222 VNAHGDAGAFQNSFNVYGRKGEPC-RACGETLRAVTVAGRTSTFCPRCQR 270 >gi|124268417|ref|YP_001022421.1| formamidopyrimidine-DNA glycosylase [Methylibium petroleiphilum PM1] gi|124261192|gb|ABM96186.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylibium petroleiphilum PM1] Length = 279 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R +L+ ++ + + + + LR+ + G++++DV+RR KYL Sbjct: 1 MPELPEVEVTRLSLVDRLRGAEIAGVRVGKP-LRWPLGCA-PSTLVGRRLLDVNRRGKYL 58 Query: 61 LI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + +++HLGMSGS + ++ A+P H + T Sbjct: 59 WFALGARPGVAADDGGLLLHLGMSGSLNL--STHAEPPGPWDH--------FDLATSHGL 108 Query: 114 VIYNDPRRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + DPRRFG + + L LG EP + F A L + + +K ALL Sbjct: 109 LRLTDPRRFGAAVWSSSRDEGAAGKLLAGLGVEPLEAGFTAALLHARLRGRRVAVKQALL 168 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 IV G+GNIY EAL+ A + P + +L+ ++ VL A+ G Sbjct: 169 AGDIVVGVGNIYASEALFLAGIDPRTPGHRISLAR------CERLVDAVRAVLARAVAVG 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ G G FQN VYG+ GEPC + CG +RRIVQ RST++C +CQ+ Sbjct: 223 GSTLRDFRDAHGLGGAFQNEARVYGREGEPCTT-CGGTVRRIVQGQRSTYFCPHCQR 278 >gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] Length = 281 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 142/299 (47%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + VT + + + F+ G+ I V RRAK Sbjct: 1 MPELPEVETIARALAPGLTGRAVTGLVVPDPKVLAGPRTKAAFAKNLVGRPITTVDRRAK 60 Query: 59 YLLIELEGNLSII--------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 LL+ L + HL M+G F I P+ + + L + Sbjct: 61 LLLVRLGPRPEVAGDAAAVLAFHLKMTGRFHIASADAP----VPERARLLVDLNDGQ--- 113 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++++D RRFG L + +LGPEP D + A ++++ +K Sbjct: 114 --ALVFSDLRRFGTARLFSPEGLAAWDFYASLGPEPWDMTPEAFTTA--LSRRSTRIKAV 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY E+L A + P + + + KL+ IQ V+ AI Sbjct: 170 LLDQTVIAGIGNIYADESLHAAGIHPETRAGDISPSR------AEKLLAAIQAVIARAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGS++RDY DG G FQN F+VYGK GEPC +CG + + AGR++ +C CQK Sbjct: 224 AGGSTIRDYRTPDGVEGGFQNEFAVYGKAGEPC-PDCGTKLVAVKVAGRTSTFCPTCQK 281 >gi|86608720|ref|YP_477482.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557262|gb|ABD02219.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 279 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R++L + + + + + + + F + G + RR KY Sbjct: 1 MPELPEVETVRQDLQRLTLGPRILAVEVLLARTIAYPAGEMFGRSLIGTRFTQWQRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ + VHL M+G + S H V ++ + + + D Sbjct: 61 LLGSLDSRAVLGVHLRMTGQLLWVQGSTPLSA----HTRVRLAFEEGWD-----LRFVDQ 111 Query: 120 RRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG M LV ++ + P L+TLGPEP +F+ Y K +K ALL+Q +V Sbjct: 112 RTFGQMWLVPAGVELEAVIPTLQTLGPEPFSPAFSEAYFQAALQKSRRLIKAALLDQSLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+ + + P+ L +L + + +VL ++ G++LR Sbjct: 172 AGVGNIYADEALFLSGIHPLTPAVQLSD------VAKARLREALIEVLRAGLEQRGTTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G G +Q VYG+ G+PC CG I+R+ AGRS +C +CQ Sbjct: 226 DYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRMKLAGRSAHFCPHCQ 275 >gi|293376465|ref|ZP_06622694.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325842052|ref|ZP_08167589.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] gi|292644887|gb|EFF62968.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325489774|gb|EGC92130.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] Length = 277 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L +K + + +I L + + + F + I ++SRR KY Sbjct: 1 MPELPEVETVKNVLNSQIKGLRIKEIELRYEPMVKNMSADVFKEKLTNQVIEEISRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + ++ HL M G + E A + +H H L N +++Y D Sbjct: 61 LVFHFQD-YQLLSHLRMEGKYFYE----ADDFELNKHIHAIFKLDNGR-----QLLYQDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTL-GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG L E + + G EP + F Y+ + K +K+ LL+Q +V Sbjct: 111 RKFGTFHLYEKGQDLEETSAFKVLGVEPFSDEFTPAYVKGKIKGKKKPIKSLLLDQSVVC 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RAK+ P+ + L N + +++ +VL AI GG+++R Sbjct: 171 GLGNIYVDEVLFRAKIHPLTPSYELSDNE------IENVVKYTVEVLAKAISLGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ V+ + GE C C I +I GR T++C CQ Sbjct: 225 FTSTHGVSGTFQEELLVHQRLGEVC-KICETPIEKIKVGGRGTYFCPTCQ 273 >gi|227548992|ref|ZP_03979041.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227078943|gb|EEI16906.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 274 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + + + G ++ RR K++ Sbjct: 1 MPELPEVEVVRRGLDTHLVGRAFRSVEVLHPRAVRGNAVDLREVLPGLQVTGTGRRGKFM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ +++VHL MSG ++ H + L + + + D R Sbjct: 61 WLTLDDGAALMVHLRMSGQMLVGPPGTVTSP----HLRIRALLDD------VELAFVDQR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG + + P+P D F+ + ++S +K LLNQ IV+GI Sbjct: 111 TFGSWLYASLGADGVPESISHIAPDPFDADFDIVQRARLVRTRSSAIKTVLLNQGIVSGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 G+IY EALW A + P R+ RSL Q++ +++ + V+ +A+ GG+S Y Sbjct: 171 GSIYADEALWAAGVKPTRRARSLRQSDAVQ------VLERSRDVMAEALAQGGTSFDSLY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+++G+ GYF + + YG+ G+ C CG +R++V GRS+ +C CQ Sbjct: 225 VNVNGASGYFSRSLNAYGRAGQRC-RRCGTEMRKVVVNGRSSCFCPGCQ 272 >gi|156743763|ref|YP_001433892.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] gi|189044671|sp|A7NQM8|FPG_ROSCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156235091|gb|ABU59874.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] Length = 283 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ +L + + + + + + P F G+++ RRAK Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++L+ L+ ++ +HL MSGS + + +H H+ + L + ++ + D Sbjct: 61 WILLFLDDGWTLALHLRMSGSLTVHPAEA----QPDKHTHLALRLEDGR-----QIFFLD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG L++++ EP ++F L + +K LL+Q ++A Sbjct: 112 PRKFGRARLLDSAGLAALDAAHG--DEPLSDAFTVERLASLLRNRKRAIKPLLLDQSVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EALWRA++ P+R L + L I+ L A+ GGS+LRD Sbjct: 170 GIGNIYADEALWRARIHPLRPAADLSAAE------VAALHDGIRAALRQALANGGSTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G+ G Q F+ Y + G PC CG I + V A R T YC CQ Sbjct: 224 YRNSYGAGGTNQEHFNAYDREGRPC-PRCGATIIKTVVAQRGTHYCPACQ 272 >gi|264676954|ref|YP_003276860.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] gi|262207466|gb|ACY31564.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] Length = 279 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEKATLGKP-LRWPL-GLLPQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDH------FDLQTSRGLLRLHDPR 111 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V L LG EP + F S +K LL+ +V G Sbjct: 112 RFGAVIYVPDEGDVLARKLLDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + + L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPTTPARD------VGRRKVKVLYEAIRSVLALAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG I+ + Q RST+YC CQK Sbjct: 226 SAANGMEGHFQLEAQVYGRDGLPCSH-CGAAIQLMRQGQRSTYYCARCQK 274 >gi|218441992|ref|YP_002380321.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] gi|218174720|gb|ACK73453.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] Length = 277 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 134/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + + L + F F G KI RR K Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLPRTLAYPFSIAEFWEGITGTKINLWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ + VHL M+G + + P+H + + L + + + D Sbjct: 61 YLLALLDCGGYLGVHLRMTGQLLWVKRDIS----YPKHTRLRLFLGEDQ-----ELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + L+ LG EP +F+ YL H+ +K+ LL+Q++ Sbjct: 112 TRTFGKVWWIPPDQSPEKIITGLQKLGVEPFSQAFSVEYLQHKLKTSRRKIKSVLLDQEV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY EAL+++ + P SL L KL I VL +ID GG++ Sbjct: 172 VAGIGNIYADEALFKSGIRPDAIACSLTPQQ------LEKLRWAICDVLQTSIDKGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G G + VYG+ GE C CG I R+ GRS+ +C CQ Sbjct: 226 SDFLSVTGVNGNYGGVAWVYGRGGESC-RVCGTPIERVKLGGRSSHFCPSCQ 276 >gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 284 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L+ + TV+D+ + ++LR P F+ RG+ ++D RR Sbjct: 1 MPELPEVEVVRLGLVDHVVGRTVSDVRVLDARSLRRHLPGPVDFADRLRGRTVVDACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +I + +P+H V + L + T R+ + Sbjct: 61 KYLWLPLDDGSALTAHLGMSGQMLI----GTEQTPDPRHLRVGLDLDDGT-----RLHFV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + + + +P D +F+A + + ++ + +K ALL+Q +V Sbjct: 112 DQRIFGGLAVSDQVSDGVPAAMAHIARDPLDPAFDAEEFSARLRRRQTGVKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWR L R TR L + + L++ + V+ A++ GG+S Sbjct: 172 SGIGNIYADEALWRVPLHYARNTRHLRRAE------IDALVEHVTDVMRAALEQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GEPC C +RR RS+F+C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLHAYGREGEPCD-RCTTPMRRSPFMNRSSFWCPACQ 276 >gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R +A +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ + H ++ L + T + + Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLG------AVPRADHVRISALLDDGT-----VLSFA 109 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG LVE P+ L +P D F+A + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG+ Sbjct: 170 QVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGQGC-RRCGAVMRREKFMNRSSFYCPKCQ 277 >gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus B4] gi|254789448|sp|C1B2Q5|FPG_RHOOB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226244474|dbj|BAH54822.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus opacus B4] Length = 289 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 139/297 (46%), Gaps = 24/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + ++ + + +R P + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIAGADRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++++VHLGMSG +++ H + L + + + Sbjct: 61 KYLWLVLEPSTVALVVHLGMSGQMLVQPPELPTEK----HLRIRARLDSG-----LDLRF 111 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LVE + + +P D+ F+ K+S +K LL+ Sbjct: 112 VDQRTFGGWALAPLVEVDGSLVPDSVAHIARDPLDSRFDLAATVKVVRGKHSEIKRVLLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA++ R T L + ++ Q+V+ +A+ GG Sbjct: 172 QTVVSGIGNIYADEALWRAQIHGNRLTDRLTGPR------IGAVLTAAQQVMREALSQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ+ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQR 281 >gi|322437072|ref|YP_004219284.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] gi|321164799|gb|ADW70504.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] Length = 269 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + + K F P + G +I V R K Sbjct: 1 MPELPEVETVANGVHDRVHGQRIDSVWTSGKPQTFKSPETEIAEVLTGARIDRVRRIGKT 60 Query: 60 LLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ +L + +VHLGM+G ++ H P H H + L+ + Sbjct: 61 VVADLTRSSGETAQFLVHLGMTGRLLVSHPEVPL----PPHTHAVLGLSGGN-----ELR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D RRFG + +V + GP + N F + +K ALLNQ Sbjct: 112 FVDARRFGRLSVVHEA---------YGGPGAEPLTINEEDFIALFKGRKLAIKAALLNQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++ G+GNIY E+L+RAK+ P R+ L ++ L +L + +VL AI GGSS Sbjct: 163 LLHGVGNIYADESLFRAKIRPRRQAGKLTRDE------LKRLRTALIEVLRHAIKLGGSS 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DYV DG G+FQ VYG+ GE C +CG +++I+ GR+T YC CQ Sbjct: 217 VSDYVDADGVRGFFQLEHKVYGRAGETC-KDCGTALKKIIVGGRTTVYCPTCQ 268 >gi|282861355|ref|ZP_06270420.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] gi|282564013|gb|EFB69550.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] Length = 285 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVEDVDVLHPRAVRRHIAGGPDFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL I L+ S++ HLGMSG +++ + + +H + + ++ T + + Sbjct: 61 KYLWIPLDEVSASLLGHLGMSGQLLVQPSEAP----DEKHLRIRVRFADDLGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ ++ V+ +A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTATLTRPRT------AELLGHVRDVMREALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGQSGYFDRSLDAYGREDEPC-HRCGTPMRRRPWMNRSSYYCPRCQR 280 >gi|253700705|ref|YP_003021894.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] gi|251775555|gb|ACT18136.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] Length = 271 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAVHSPKLRTLVPPELPSILAGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + H+H + L + + ND R Sbjct: 61 II-TCRQGSLLLHLGMTGHLRLVPAGAG----AGAHDHFDLVLESG-----LILRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ LR +GPEP + YL + K + L+ L++ +VAG+ Sbjct: 111 RFGS-IHFTSGDPLKHKLLRGIGPEPLTDELTGHYLYRKSRGKKAPLQRFLMDSSVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P + SL + + K A + D+ Sbjct: 170 GNIYAAETLFRCGMLPFTQAGSLSEGDCDRLCDCIK--------KTLAASIEAGRVMDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTF+C CQ Sbjct: 222 VREEKLVYFPQQLYVYGREGLAC-RECGSAIERGRLGNRSTFHCPRCQ 268 >gi|320352499|ref|YP_004193838.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] gi|320121001|gb|ADW16547.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] Length = 279 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+ RR L+ + TV + LR P ++I + RRAKY Sbjct: 1 MPELPEVEVTRRGLLAPLSGRTVVRVSWSAHRLRGPIPRKLLQEHIAAQQIRTIDRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ + +++HLGM+G + +H+H+ + L N V +ND Sbjct: 61 LLLRMVNGAVLVIHLGMTGKLGLIQG----QTTLHKHDHLVLHLDNG-----LDVRFNDS 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + + + + + R G EP +F A L + +K+ L+N +++ Sbjct: 112 RRFGSIVVWPPDHAAQLEADFSRKEGLEPFGPAFIADNLLALARGRRVAVKSLLMNSRLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+ A+++P + L + ++IQE +++L AIDAGGSS+ Sbjct: 172 AGIGNIYANEILFAARIAPQQPAHLLTEKEWG------RIIQESRRILQLAIDAGGSSIS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G GYFQ +VYG+ PC CGQ I + +Q GR+T++C CQ Sbjct: 226 DFLGVSGHPGYFQLQLAVYGRKDAPC-PRCGQAILKTIQGGRATYHCPGCQ 275 >gi|319948354|ref|ZP_08022498.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] gi|319437985|gb|EFV92961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] Length = 303 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 31/303 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + + A G+ + RR Sbjct: 1 MPELPEVEVVRRGLADHVVGRTLVSVEVTGARTARRQPGGAAEIVARLTGRTVSGARRRG 60 Query: 58 KYLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + + G ++VHLGMSG ++ +H H L + Sbjct: 61 KYLWLTLDGDDAAGADCLLVHLGMSGQMLVTGAGAP----PVRHLHARAVLDDGN----- 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQ------YPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + D R FG +V + P + +P ++ ++ + ++++ Sbjct: 112 ELRFVDQRTFGGWTVVPLAGARDGSGVLLPAPAAHIAADPFESGYDPVAAARVIRRRDTE 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q +V+GIGNIY EALWR+ L R++ ++ + ++++ + V+ Sbjct: 172 IKRLLLDQTVVSGIGNIYADEALWRSGLHGRRRSGAIT------LRAVTRVLEHARDVMA 225 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DA+DAGG+S YV+++G+ GYF + VYG+ G PC S CG + R R + +C Sbjct: 226 DALDAGGTSFDALYVNVNGASGYFDRSLDVYGRAGLPC-SRCGTAVVREDFMNRGSHFCP 284 Query: 286 YCQ 288 CQ Sbjct: 285 VCQ 287 >gi|269958776|ref|YP_003328564.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] gi|269848606|gb|ACZ49250.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] Length = 267 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V D+ +HR++LR F +A +G++I V R A+YL Sbjct: 1 MPELPEAEVISRFFADKAVGRRVEDVTVHRRDLRARIADDFESAVKGREIRSVDRIARYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL +I HLGMSG I +H+HV + L + + +++NDPR Sbjct: 61 VFELSDGARVIFHLGMSGRMIHTKPHV-----LGKHDHVVMLLDDE-----FNIVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV+ P A+ S + + K++ L+N IVAGI Sbjct: 111 RFGSVLLVDFQAYANIASRIGPDPLSAEFSATYLMRQSKACVKST-----LMNNSIVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA +SP+R + ++++E + L AIDAGGS+++DY Sbjct: 166 GNIYASEILFRAGVSPMRAMDDVSYEE------CEQIVRETKATLRLAIDAGGSTIKDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G++G FQ F VY + G+PC + CG+ I +GR+TF+C CQK Sbjct: 220 IPTGAVGGFQKHFMVYQRAGKPC-NICGERILSERLSGRTTFFCALCQK 267 >gi|170078422|ref|YP_001735060.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|34765741|gb|AAQ82445.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|169886091|gb|ACA99804.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] Length = 277 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 138/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR LM + N T + RK L + P HF +G I D RR K Sbjct: 1 MPELPEVETVRRGLMQISLNQQFTGAEILLRKTLAYPTDPDHFLGMIQGLFIQDWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL +L ++ +HL M+G F+ H + + + + + D Sbjct: 61 YLLGKLSDGSTLGIHLRMTGKFLWTTPDVPVQK----HTRIRFFIEGDR-----ELRFVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + V + L LG EP F A L + K+ +K LL+Q I Sbjct: 112 LRTFGQIWWVPAGTIVKSVITGLTRLGVEPLSPDFTADLLANFCEKRQRPMKTFLLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIY EAL+++ + P RK SL + + KL + I +VL +I GG++ Sbjct: 172 ITGLGNIYADEALFKSGIHPTRKASSLKMSE------IEKLHKAIVEVLETSIAQGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V G+ G + YG+TGEPC C I RI GRST +C CQ Sbjct: 226 SDFVSTTGTNGNYGGMALTYGRTGEPC-RVCSHPIERIKLGGRSTHFCPQCQ 276 >gi|300783720|ref|YP_003764011.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299793234|gb|ADJ43609.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 289 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 15/292 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + + T+ + + +R F+ G ++ RR Sbjct: 1 MPELPEVEVVRLGLQVHVAGRTIREAEVLHPRAIRRHALGAEDFTQRLAGTRVEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ + +H V + ++ ++ Sbjct: 61 KYLWLELSDKEALLAHLGMSGQMLVQPEGAP----DEKHLRVRLRFEDDGPELRFVDQRT 116 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 S + + +P D F+ + + +K ALL+Q +V Sbjct: 117 FGGLALDDLSDIGSEVLLPDTIAHIARDPMDPEFDLDAAVRALRSRRTEVKRALLDQTLV 176 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRA+L R T L G +L+ V+ A+ AGG+S Sbjct: 177 SGIGNIYADEALWRARLHWARPTEKLTMAKG------RELLSAASDVMNAALGAGGTSFD 230 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ G PC CG IRR RS+F C CQ Sbjct: 231 ALYVNVNGQSGYFDRSLDAYGQEGMPC-HRCGTAIRREPFMNRSSFSCPRCQ 281 >gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229321700|gb|EEN87497.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 289 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++VHLGMSG +++ + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQ----PPTVDWEKHLRIRLALDSGAD-----LRF 111 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + VE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R + L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIA------ETLTRPKLRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|221068913|ref|ZP_03545018.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] gi|220713936|gb|EED69304.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] Length = 279 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEAATLGKP-LRWPLGLQ-PQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A + H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEAPLGEGGPHDH------FDLQTSRGLLRLHDPR 111 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V S L LG EP F L S +K LL+ +V G Sbjct: 112 RFGAVVYVPGESDALARKLLDHLGMEPLSEGFTLAALKAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPATPARD------VGARKVTALYEAIRAVLAMAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG IR + Q RST+YC+ CQK Sbjct: 226 SAANGMEGHFQLQAQVYGRDGLPCTH-CGAAIRLMRQGQRSTYYCSSCQK 274 >gi|78778719|ref|YP_396831.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] gi|123554638|sp|Q31CK0|FPG_PROM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78712218|gb|ABB49395.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] Length = 293 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 141/305 (46%), Gaps = 28/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F + + RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRNSTVAFPTEKEEFIKGLQNSLLYKWDRRGK 60 Query: 59 YLLIELEGNLSIIVHL-----GMSGSFIIEHTSCAKPIK-------NPQHNHVTISLTNN 106 YL+ EL+ + + + F++ H K +H + + Sbjct: 61 YLIAELKKIENENIKFPLKKLRQNNGFLVVHLRMTGYFKFIDNSTQPCKHTRIRVF---- 116 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + K + Y D R FG M ++ L L +LGPEP +F+ YL K+ Sbjct: 117 -DKKNNELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKNFDEKYLKKVISKRK 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++K LL+Q IVAGIGNIY E+L+ A +SP R ++ K+ L L + I V Sbjct: 176 KSIKAILLDQTIVAGIGNIYADESLYSAGISPFRAAKT------IKKNELINLKESIVNV 229 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +I +GG++ D+ ++G G F +VY +TG+ C CG +I + AGRST +C Sbjct: 230 LKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIEKQKIAGRSTHWC 288 Query: 285 TYCQK 289 CQK Sbjct: 289 PNCQK 293 >gi|159030210|emb|CAO91102.1| mutM [Microcystis aeruginosa PCC 7806] Length = 285 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 132/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + + ++ L + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGKKIIGGEVLLQRTLAYPNCEATFLQGITQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + P H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPL----PIHTRLRFFFANQQ-----ELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + L+ LG EP D +F YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTPDYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P + + L + I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHPQTAAN------LLKIEQIDLLTKNIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + + VYG+TGE C CG I RI +GRS+ +C CQ Sbjct: 226 SDFLHVTGVNGNYGSMAWVYGRTGENC-RLCGATIARIKLSGRSSHFCPQCQ 276 >gi|226305919|ref|YP_002765879.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] gi|259647148|sp|C0ZXQ5|FPG_RHOE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226185036|dbj|BAH33140.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] Length = 289 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 141/296 (47%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++VHLGMSG +++ + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQ----PPTVDWEKHLRIRLALDSGAD-----LRF 111 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + VE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R SL + L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIAESLTR------PKLRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|332701734|ref|ZP_08421822.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] gi|332551883|gb|EGJ48927.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] Length = 299 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 139/317 (43%), Gaps = 46/317 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK----------NLRFDFPHH----FSAATR 46 MPELPEVE I R L ++ + ++ + R F+ R Sbjct: 1 MPELPEVETIARGLAPDVQGRLIAEVEVRYSGAVCQSAGPGTTRKTTAPEKGRAFADLVR 60 Query: 47 GKKIIDVSRRAKYLLIE--------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 G+++ V RRAK L+ + +L ++ HL M+GS + + + Sbjct: 61 GRRVDKVWRRAKLLVFDLGPKNAAESGADKVSPADLHLVFHLKMTGSVWLPPSGA----Q 116 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 H H+ +L N T +V + D R+FG+ + P P Sbjct: 117 PDAHTHIVFTLDNGT-----KVHFRDIRKFGWCLALTGEELRSMPFFA--ALGPEPLEIG 169 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 F + + +K LL+Q+I+AGIGNIY E+L+R+ + P K + + Sbjct: 170 EKDFVALFKGRKAGMKALLLDQEIIAGIGNIYADESLFRSGIHPRTKAADVPEA------ 223 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L +E+Q VL AI GS+ DY G G FQN F VYG+ GE C+ CG ++ Sbjct: 224 KLRTLHRELQAVLRQAIAENGSTFSDYRTAQGDAGAFQNRFLVYGRAGEKCVK-CGGTLQ 282 Query: 273 RIVQAGRSTFYCTYCQK 289 V AGR++ +C CQK Sbjct: 283 SEVVAGRTSVFCPKCQK 299 >gi|240169619|ref|ZP_04748278.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 283 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 148/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLAAHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + +++VHLGMSG ++ + H ++ L + T + + Sbjct: 61 KYLWLTLNSPDSALVVHLGMSGQMLLG------VVPRSDHVRISALLDDGT-----VLSF 109 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV P+ L +P D F+A + K+S LK LLN Sbjct: 110 ADQRTFGGWLLADLVTVDGSVVPAPVAHLARDPLDPRFDARAVVEVLRGKHSELKRQLLN 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK++ R +L + L ++ +V+ +A+ GG Sbjct: 170 QEVVSGIGNIYADEALWRAKVNGARVAATLTRRQ------LGAVLDAAAEVMREALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ G+ C CG +IRR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGRDGQNC-RRCGAVIRREKFMNRSSFYCPRCQ 278 >gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylase [Rhodococcus jostii RHA1] gi|123045457|sp|Q0S2E0|FPG_RHOSR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110823012|gb|ABG98296.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 292 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + ++ + + +R P + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++++VHLGMSG +++ H + L + + + Sbjct: 61 KYLWLVLEPSTVALVVHLGMSGQMLVQPPELPTEK----HLRIRARLDSG-----LDLRF 111 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LV+ + + +P D F+ K++ +K ALL+ Sbjct: 112 VDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKHTEVKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA++ R T L + +++ Q+V+ +A+ GG Sbjct: 172 QTVVSGIGNIYADEALWRARIHGNRLTDRLSG------PKVREVLTAAQEVMREALTQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQ 280 >gi|323359693|ref|YP_004226089.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276064|dbj|BAJ76209.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 296 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 19/301 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFD-FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + + R HF A G++I RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNT 109 K+L + + + +I+ HLGMSG ++ + ++P H +++ + Sbjct: 61 KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPEERHERIRIELEHPVHGPLSVVFADQRTF 120 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 V G +SL + + +P D +F+ + + S +K Sbjct: 121 GSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRVGRTASGIKR 180 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q + +GIGNIY E+LW A++ P S P + +L+ E+++VL A+ Sbjct: 181 VLLDQTVASGIGNIYADESLWAARIHPEAVASS------LPTRAVNRLLGEVREVLDKAL 234 Query: 230 DAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF ++ + YG+TG+PC CG+ I R+ RS+ +C +CQ Sbjct: 235 AEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGQPC-PRCGRPIVRVSFMNRSSHFCPHCQ 293 Query: 289 K 289 + Sbjct: 294 R 294 >gi|269836816|ref|YP_003319044.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269786079|gb|ACZ38222.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L + T+ + L + P F A G++I D RR K Sbjct: 1 MPELPEVENVRRSLTAAVDGTTIAAVRLGAFTGCIAAPEPDAFVARVTGRRITDFGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLI L+ +I VHL M+G + +H+H+T L + + ++D Sbjct: 61 YLLIALDSGDTIAVHLRMTGELTVTSPDTPT----GKHHHLTFVLDDGR-----ELRFSD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L+ PEP D+ F A ++ +K LL+Q +A Sbjct: 112 TRKFGRLTLLTPDEAAALDRSLG--PEPLDDRFTAERFAAMLAARSRAVKPLLLDQTFLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A++ P+R SL + +L+ I+ L AI+ GG++LRD Sbjct: 170 GVGNIYADEALFAARIHPLRPANSLTLDE------AARLLDSIRVTLAAAIERGGTTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G G Q+ ++Y + G+PC CG+ I R+V R T +C CQ Sbjct: 224 YRDGLGRPGNNQHYLNIYHRAEGDPC-PRCGEPIARLVVVQRGTRFCPRCQ 273 >gi|328954231|ref|YP_004371565.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] gi|328454555|gb|AEB10384.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 143/288 (49%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+IRR L + + + L R+ LR A+ G ++RR KYL Sbjct: 1 MPELPEVEVIRRGLAKKLVGDKIIAVDLGRQRLRRQALDSELASLVGHTFSRLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ +++VHL M+G +++ SC P H H+T+ ++++Y D R Sbjct: 61 LLHLDQGQTLLVHLAMTGRLLLQTNSCPL----PPHVHLTLHCQTG-----HKLLYQDMR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + P L +G EP +L + + +KN LL+ + +AGI Sbjct: 112 RFGQILLYPPGK--RPPALEQVGWEPFSRGLTPEWLRQKTVRLTRPVKNFLLDGRFIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A++ P + I+++L AI AGG+++ +YV Sbjct: 170 GNIYASETLFEARVHPQTPVGRIDLKTWETLLR------AIRRILRRAIKAGGTTIVNYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G F VYG+ G PC C I R+V AGRSTF+C CQ Sbjct: 224 DCDGQSGLFGVQLKVYGRAGSPC-PVCQTPITRLVMAGRSTFFCPTCQ 270 >gi|291294733|ref|YP_003506131.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] gi|290469692|gb|ADD27111.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] Length = 268 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 30/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + LH+ R+ + G++++ SRR KYL Sbjct: 1 MPELPEVETTRRILEPYLLGQRIQQL-LHQDPARYRN----TERAEGRRVLGTSRRGKYL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+ NL +IVHLGM+G F + +H VT+ L + T + Y DPR Sbjct: 56 IIHLDENLELIVHLGMTGGFRF---------EPHRHTRVTLHLPHQT------LYYTDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +VE + L +GPEP + F + Q + +K LL Q+ VAG+ Sbjct: 101 RFGKWWVVEAGDYREIDLLCRMGPEPLSDDFTLAH-FQQALRTPRKIKEVLLAQEAVAGV 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY E+LW +++ P R SL + +L + I+ V+ A++AGGS+L D Sbjct: 160 GNIYADESLWLSQIHPERPAASLSSPE------VRRLYKAIRVVMERAVEAGGSTLSDAS 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ + Y +TG+PC C I +IV GR T +C CQ+ Sbjct: 214 YRQPDGQPGYFQFQHNAYDRTGQPCKRKGCTGRIAKIVVGGRGTHFCPQCQQ 265 >gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81700438|sp|Q73VL9|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10] Length = 283 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + ++VHLGMSG ++ A+ H ++ L + T + + Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAVPRAE------HVRISALLDDGT-----VLSF 109 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG L+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R ++ L ++ +V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIAATMTGRQ------LTAVLDAAAEVMRDALAQGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|237725655|ref|ZP_04556136.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D4] gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE I+R + + + + + + + + + F T G+ I +SRR KY Sbjct: 1 MPEMPEVETIKRIIEPQIVGVKIDSVITNHSQVIAYPDMYRFEQETNGQTINKMSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I + +I+HL M+G ++ + H H+ ++L+N T ++ Y D Sbjct: 61 LTIHFDSGDRLILHLRMTGQLLVTPHNYP----MENHTHLIMNLSNGT-----QLRYIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RR G L + L LG EP DN+ A YL K+ +K L +Q ++AG Sbjct: 112 RRLGRFWLFGKNDIDDKSGLEKLGMEPLDNNLTAPYLVAHLSKRKRPIKEMLHDQTVIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L A + P + L L+ +I++++ ++I+ S ++Y Sbjct: 172 IGNIYSDEILHAAGIYPGKYCSDLSDKEWNS------LVVKIREIIRNSIETNRMSPQEY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ GE C NCG +I +IV GRS+ YC +CQK Sbjct: 226 LEGKGKEYRNMPYLRVYGQKGERC-KNCGSIIEKIVIGGRSSCYCPHCQK 274 >gi|326318315|ref|YP_004235987.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375151|gb|ADX47420.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 271 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + M + + L K+LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIADAMAGAVIESVVLG-KSLRWPLGCA-PEDLHGLRVVAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS + ++ + H+H + T + + DPR Sbjct: 59 LLDL-DRGMLLIHLGMSGSLRFDRSTES----PGAHDHFLM------ATSRGTLRLKDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + ++ L LG EP ++F +K LL + V G Sbjct: 108 RFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTARASSIGPLR------ARRLHEAIRTVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 222 AGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|84498323|ref|ZP_00997120.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84381823|gb|EAP97706.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 290 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 27/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L + + T + R+++ P + G I R Sbjct: 1 MPELPEVEVVRRGLADHVVGRRIATAAFTGARVARRHV--PGPIDLAERIVGLDITQARR 58 Query: 56 RAKYLL----IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 R KYL + E +I HLGMSG ++E + +H H + + Sbjct: 59 RGKYLWLVLGHDGEPVHGLIAHLGMSGQLLVEAADAP----DEKHLHARFTFADGDP--- 111 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG L + + +R + P+P + +++ + + + +S +K + Sbjct: 112 -ELRFVDQRTFGGFALDDLADDGVPHQIRHIAPDPFELAYDQVAVVRRIKASDSAIKRMI 170 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+GIGNIY EALWRAK+ R + SL K ++ +++ ++V+ A+ Sbjct: 171 LHQGVVSGIGNIYADEALWRAKVHGERPSSSLT------KPVIARVLDHAREVMAAALIE 224 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + YG+ GEPC CG IRR RS+F C CQ Sbjct: 225 GGTSFDALYVNVNGASGYFDRSLHAYGQEGEPCA-RCGTPIRREHFMNRSSFSCPTCQ 281 >gi|157412690|ref|YP_001483556.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9215] gi|166988462|sp|A8G2Y9|FPG_PROM2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157387265|gb|ABV49970.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9215] Length = 293 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 141/304 (46%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F + +RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTVAFPNKKEDFIGGLNNSLLYKWNRRGK 60 Query: 59 YLLIELEGNLSIIVH-----LGMSGSFIIEHTSCAKPIK------NPQHNHVTISLTNNT 107 YL+ EL+ + + F+I H K P + N Sbjct: 61 YLIAELKKLGNENGRFPLEKFSKNNGFLIVHLRMTGYFKFINNSAQPCKHTRIRVFDNKN 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 N + Y D R FG M ++ L L +LGPEP F+ IYL K+ Sbjct: 121 N----ELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKVISKRTK 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R+ K+ L KL + I VL Sbjct: 177 SIKAILLDQTIVAGIGNIYADESLYSAGISPFREART------IKKNELIKLKESIVTVL 230 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 ++I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GRST +C Sbjct: 231 KNSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERKKISGRSTHWCP 289 Query: 286 YCQK 289 CQK Sbjct: 290 KCQK 293 >gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|166215633|sp|A0QJ66|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 283 Score = 179 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + ++VHLGMSG ++ A+ H ++ L + T + + Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAVPRAE------HVRISALLDDGT-----VLSF 109 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG L+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|78222421|ref|YP_384168.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] gi|90101303|sp|Q39WD1|FPG_GEOMG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78193676|gb|ABB31443.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] Length = 267 Score = 179 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LRF P + G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERELTGKRIDRVVVRTPKLRFPIPQELHVSLPGRTVRSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +IVHLGM+G + + +H+H+ I + T + ++DPR Sbjct: 61 LFD-CETGWLIVHLGMTGFLRLVAGTAP----PGKHDHLDIVFADGT-----VLRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T +P L +GPEP +F+ YL + +K L+N IVAG+ Sbjct: 111 KFGTVAW-TTDAPATHPLLAAIGPEPLTATFDGAYLFAVTRTRRVAVKQLLMNAAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL + +L + +++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRPASSLGRPE------CERLARTVREVLQESIDQGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ Y F VYG+ + C + CG + I RST +C CQ Sbjct: 220 VEEETVAYHPLNFDVYGRGTDAC-TRCGGALEEIRLGNRSTVFCPRCQ 266 >gi|296139285|ref|YP_003646528.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] gi|296027419|gb|ADG78189.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] Length = 286 Score = 179 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + + R G ++ RR Sbjct: 1 MPELPEVEVVRRGLADHLVGRTVTAVEVLHPRAARRHVAGDADLIGQVTGAQVTSAERRG 60 Query: 58 KYLLIELEGNLSI-----IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + L +VHLGMSG ++ +H + L + Sbjct: 61 KFLWLPLARAGRPADAAIVVHLGMSGQMLVGPGDD-------RHLRIRAGLDDGA----- 108 Query: 113 RVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D R FG LVE + + +P D F+ + + K++ +K Sbjct: 109 VLRFVDQRTFGGWAVDPLVEVDGTLVPESVAHIARDPLDARFDRAAVIARMKAKDTEVKR 168 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +++G+GNIY EALW +++ R+ +L K L +L+ + +V+ A+ Sbjct: 169 VLLDQTVISGVGNIYADEALWLSRVHGRRRASALT------KPALGRLVDDATEVMRKAL 222 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D GG+S YV+++G GYF+ + + YG+ GEPC CG ++RR R + +C CQ Sbjct: 223 DQGGTSFDSLYVNVNGQSGYFERSLNAYGRDGEPC-RRCGTIMRREQFMNRGSHFCPTCQ 281 >gi|319795625|ref|YP_004157265.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] gi|315598088|gb|ADU39154.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] Length = 270 Score = 179 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 97/293 (33%), Positives = 147/293 (50%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ RR + + + + + LR+ P A G+ + +V RR Sbjct: 1 MPELPEVEVTRRGFADRIAGARIESVRIGKP-LRWALMVVPE----ALVGRHVREVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLLI+L+ L ++ LGMSGS + H+H + T + N Sbjct: 56 KYLLIDLDQGLLLLH-LGMSGSLRFDTALPP----PGTHDHFDLVTDRGT------LRLN 104 Query: 118 DPRRFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + V+ + L LG EP ++F+ K+ + +K LL + Sbjct: 105 DPRRFGAVVYVDDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKTTVKQVLLAGDV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY EAL++A + P + + KL ++++L A++ GGS+L Sbjct: 165 VVGVGNIYASEALFQAGIRPTLSAARISRPR------AAKLHAAVREILARAVEKGGSTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ ++DG GYFQ +VYG+ GEPC C IR++ Q RST++C CQK Sbjct: 219 RDFSNVDGQNGYFQLEATVYGRAGEPC-RVCATPIRQLRQGQRSTYFCPNCQK 270 >gi|297181411|gb|ADI17600.1| formamidopyrimidine-DNA glycosylase [uncultured delta proteobacterium HF0130_19C20] Length = 272 Score = 179 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + +++ + + + F G+K V+RRAKY Sbjct: 1 MPELPEVETVVRELSNEILGDSISSVDIFRNNPIVQGDLEAFQKQLIGRKFKYVTRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + ++ H+ M+G FI+ ++N V L + +I++D Sbjct: 61 LIFHLHPHGFMVAHMRMTGKFIVCDP----IDMPSKYNRVWFHLKSGR-----LMIFDDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG +++ E L LG EP N Y + +K+ LL+QKI+AG Sbjct: 112 RCFGTLEVYE--NLSDSKALNKLGIEPFSEDLNVNYFKSKVSSSKREIKSILLDQKIIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R+K+SP+R + ++ + +I+ Q VL +AI+ G+++ ++ Sbjct: 170 LGNIYVSEILFRSKISPLRTSETIRNKEWSQ------IIKYTQSVLEEAIENNGTTISNF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G FQ VY KT +PC +CG I+RIVQ RSTF+C CQ+ Sbjct: 224 RRVDEKTGKFQKFLKVYDKTEKPC-PDCGIPIQRIVQQQRSTFFCPECQQ 272 >gi|239817308|ref|YP_002946218.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] gi|259647152|sp|C5CYZ1|FPG_VARPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|239803885|gb|ACS20952.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] Length = 270 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + + LR+ A G++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGFAERIAGARIDAVRIGKP-LRWALMV-MPEALVGRRVLQVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ LGMSGS + A H+H + T + NDPR Sbjct: 59 LIDLDRGLLLLH-LGMSGSLRFDAALPA----PGVHDHFDLVTELGT------LRLNDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + VE + L LG EP ++F+ K+ + +K LL +V G Sbjct: 108 RFGAVVYVEDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKAAVKQVLLAGDVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + + +L ++++L A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTLSAARISRPR------AARLHAAVREILARAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++G GYFQ +VYG+ GEPC C IR + Q RST+YC CQK Sbjct: 222 SNVEGQSGYFQLEATVYGRAGEPC-RVCATPIRLLRQGQRSTYYCPNCQK 270 >gi|13096238|pdb|1EE8|A Chain A, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 gi|13096239|pdb|1EE8|B Chain B, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 Length = 266 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 152/289 (52%), Gaps = 29/289 (10%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+LL Sbjct: 1 PELPEVETTRRRLRPLVLGQTLRQV-VHRDPARYRN----TALAEGRRILEVDRRGKFLL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 LEG + ++ HLGM+G F +E T H + L + ++DPRR Sbjct: 56 FALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLE------GRTLYFHDPRR 100 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + V + P L LGPEP +F + LK LL+Q++ AG+G Sbjct: 101 FGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVG 160 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD--Y 239 NIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Y Sbjct: 161 NIYADEALFRARLSPFRPARSLTEEE------ARRLYRALREVLAEAVELGGSTLSDQSY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 RQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 262 >gi|325290276|ref|YP_004266457.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] gi|324965677|gb|ADY56456.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] Length = 273 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IR +L + + + L ++ + GKK+ + RR KY Sbjct: 1 MPELPEVENIRLSLAKNIIGQEIKEFKLFWPDVFVNATDLDPNDLLIGKKVESLGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L G++++I+H M+G I + +H H L N + ++D Sbjct: 61 LFIHLAGSVTLILHFRMTGKLIYYQGE----HEPEKHTHAVFYLENGQ------IHHSDM 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LVET+L + P + LGPEP D F+ + K S +K+ALL+Q+ VAG Sbjct: 111 RKFGRIQLVETALLGKVPAIAKLGPEPFDERFSIEVFGQRLSGKKSTIKSALLDQETVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A + P R+T S + L IQ L I+AGG+S RDY Sbjct: 171 IGNIYADEALFMAGIRPERRTAS------LKISEVILLYDAIQGALKAGIEAGGTSFRDY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ G FQ VYG+ G+ C CG ++ + AGR+T +C CQ Sbjct: 225 RDGDGNKGLFQENLYVYGRAGQNC-KVCGSVLGKTKTAGRTTVFCPVCQ 272 >gi|320008313|gb|ADW03163.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC 33331] Length = 285 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + E + S++ HLGMSG +++ + +H + I + T + + Sbjct: 61 KYLWVPLDEADSSLLGHLGMSGQLLVQPEDAV----DEKHLRIRIRFDDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T SL + +L+ ++ V+ +A+D GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTASLTRPRT------AELLGHVRAVMREALDQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|227833426|ref|YP_002835133.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|262184416|ref|ZP_06043837.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|254789433|sp|C3PH91|FPG_CORA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227454442|gb|ACP33195.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 282 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + +H SA G+KI V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPYVVGRSFAAVEVHHPRANRGQEAPLSALLVGRKIAAVARRGKFM 60 Query: 61 LIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I H + L + T R Sbjct: 61 WLEFADEDHSDPARDVLFIHLGMSGQVRIGEVDSP-------HVRIAAVLDDTT-----R 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ L + + P+P + F+ + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWRLGPWL------SMAHIAPDPLETDFDLTAAGRRLRAKRTVVKAALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALW ++SP++K +L Q + +I V+ A+ GG Sbjct: 163 QTVLSGVGNIYADEALWAVQISPLKKASALRQRDAV------AVISAAADVMRAALAVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + VYG+ G+PC CG+ I + V GR T YC CQ Sbjct: 217 TSFDALYVNVNGESGYFDRSLHVYGRGGQPC-ERCGEEILKTVLGGRGTHYCPSCQ 271 >gi|169831563|ref|YP_001717545.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] gi|169638407|gb|ACA59913.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] Length = 276 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 134/289 (46%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I R+L + + V + + P F+ G+KI+ +SRR KY Sbjct: 1 MPELPEVETIVRDLGARLTGLMVERAEVLLPKVVAAPAPEEFARLIAGRKILGLSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LIEL +I+HL M+G + P+H H+ + L + + D Sbjct: 61 ILIELSRGWVLILHLRMTGQLVY----TTVLEPFPKHTHLVLHLDQG------VLRFTDL 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG LV + P LR LG EP F + + +K LL+Q + G Sbjct: 111 RQFGRASLVPAREVRRVPGLRELGVEPLGAEFVKEDFIRKLARSRRMIKPLLLDQTFLTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA + P R+ L L + I++VL + + G+S++ Y Sbjct: 171 LGNIYTDEALHRAGIHPERRAADLDTREAGT------LYRAIREVLAEGVAFRGTSVQHY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G FQ VYGK G PC CG I RI GR T YC CQ Sbjct: 225 VDGSGQRGRFQEILRVYGKKGVPC-PVCGVPIERIRCGGRGTHYCPECQ 272 >gi|33860886|ref|NP_892447.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931224|sp|Q7V2X4|FPG_PROMP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633828|emb|CAE18787.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 292 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 150/308 (48%), Gaps = 35/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH-HFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +KN + + + R++ + + F + + +RR K Sbjct: 1 MPELPEVETVRRGLEQKLKNFIIKRVEICRESTVAYPIDKIDFIEGLQNSLLYKWNRRGK 60 Query: 59 YLLIE---------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 YL+ E N ++VHL M+G F +T + NP + Sbjct: 61 YLIAELKKTVSNNNDANEISFVENGVLVVHLRMTGYFTFNNT-----LTNPCKHTRIRLF 115 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFH 161 NN N + Y D R FG M V L L TLGPEP SFN YL Sbjct: 116 DNNNN----ELRYIDVRSFGQMWWVRDGLSPNNIIKGLGTLGPEPFSESFNVNYLKKVIS 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K ++K+ LL+Q I+AGIGNIY E+L+ A +SP R+ R++ +N + +L + + Sbjct: 172 NKTRSIKSILLDQTIIAGIGNIYADESLYSAGISPFREARTINKNE------IKRLRRAV 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL +I AGG++ D+ ++G G F +VY +TG+ C C +I R +GRST Sbjct: 226 VDVLKKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKC-RQCKNLIERQKISGRST 284 Query: 282 FYCTYCQK 289 +C CQK Sbjct: 285 HWCRKCQK 292 >gi|319761702|ref|YP_004125639.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|330823573|ref|YP_004386876.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] gi|317116263|gb|ADU98751.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|329308945|gb|AEB83360.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] Length = 271 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + T+ + L K+LR+ G++++ V RR KY Sbjct: 1 MPELPEVEVTRRGLADAIGGATIRAVALG-KSLRWPLGLAPGE-LAGQRVLAVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H + H+H + T + +DPR Sbjct: 58 LLLDLQQGLLLIHLGMSGSLRFAHG----LPQRGPHDHFDMETDRGT------LRLHDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L TLG EP F+ +K LL ++V G Sbjct: 108 RFGAVVWAAGEDDPQARKLLGTLGVEPLGEDFDFQAFHAALRASRMPIKQLLLAGRVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A++ P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLARIRPTMRASAIGSQR------ARRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ +VYG+ G PC CG +R + Q RST++C CQ+ Sbjct: 222 SGVDGNAGHFQAEANVYGREGLPC-RQCGTPVRLLRQGQRSTYFCPNCQR 270 >gi|297565906|ref|YP_003684878.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] gi|296850355|gb|ADH63370.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] Length = 274 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 137/293 (46%), Gaps = 31/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR L + T+ + R H G+K++ +RR KY Sbjct: 1 MPELPEVETTRRILEPYLLGQTIQKLSHSDPTRYRHTELAH------GRKVLGTTRRGKY 54 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L +LEG L I+HLGM+G F H +T+ L + Y DP Sbjct: 55 MLWQLEGGLEAIIHLGMTGGFRF---------TPHTHTRLTVEL------PGRTLYYTDP 99 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +VE + L +GPEP F +K LL Q+ VAG Sbjct: 100 RRFGKWWVVEAGNYREIDLLGRIGPEPLSQEFTLPQFQRVLAGTRRRIKEVLLGQEAVAG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 IGNIY E+LW++++ P R +L + +L + I+ V+ A++AGGS+L D Sbjct: 160 IGNIYADESLWQSRIHPERPANTLKPAE------VKRLYKAIRDVMGRAVEAGGSTLSDN 213 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G GYFQ + YG+ G+ C C I RIV GR T +C CQ+ Sbjct: 214 SYQQPTGESGYFQFEHNAYGRPGQRCKRPGCTGKIARIVVGGRGTHFCPNCQR 266 >gi|256832888|ref|YP_003161615.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] gi|256686419|gb|ACV09312.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] Length = 309 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 92/313 (29%), Positives = 147/313 (46%), Gaps = 35/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + VT + + R+ ++R PH FSA G+ + +RR Sbjct: 1 MPELPEVETVRDGLARHVLGHQVTGVEVFREYSVRRHEGGPHDFSARLSGRVMRGWARRG 60 Query: 58 KYLLIELEGNLSI-IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL-TNNTNTKKYRVI 115 K+L E + + + HLGMSG +I+ A+ P+H HV + L T+ + ++ V Sbjct: 61 KFLWCEFDEPGEVLVAHLGMSGQLLIKEAQDAE----PRHPHVRVRLWTHTADGREGVVD 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT------------------ 157 + D R FG++ L T P S Sbjct: 117 FVDQRTFGYLALSPTVATADARPGGRGSERAVVPSLAEHIARDLLDPVLAVGSVQWEALL 176 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q +++G+GNIY E LWRA++ ++ + +L Sbjct: 177 DRCVGSKVAVKRLLLDQSVMSGVGNIYADEGLWRARIHGESAANAVTR------TAWRRL 230 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + + +V+ +A+ GG+S D YV+++G GYF + +VYG+ GEPC C IRR Sbjct: 231 LTHLGEVMGEALVQGGTSFDDLYVNVNGQSGYFDRSLNVYGREGEPC-RRCATPIRRSAF 289 Query: 277 AGRSTFYCTYCQK 289 RS+F+C CQ+ Sbjct: 290 MNRSSFWCPRCQR 302 >gi|266618595|pdb|3GPX|A Chain A, Sequence-Matched Mutm Interrogation Complex 4 (Ic4) gi|266618601|pdb|3GQ3|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec5-Loop Deletion Complex Length = 257 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 134/290 (46%), Gaps = 35/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGG------ 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 219 ----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|220909541|ref|YP_002484852.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] gi|219866152|gb|ACL46491.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] Length = 293 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 93/299 (31%), Positives = 131/299 (43%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + D+ L R F +G +I RR K Sbjct: 1 MPELPEVETVRRGLEQLTLGRKCLGGDVLLQRTISHPFSVAEFLDGLQGTRIECWQRRGK 60 Query: 59 YL-------LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 YL + VHL M+G + +S H V + + ++ Sbjct: 61 YLLADLVDANYPKLRRGWLGVHLRMTGQLLWLESSQPLQK----HTRVRLFFADAASSLP 116 Query: 112 YRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + + D R FG M V E + LGPEP F+ YL Q + +KN Sbjct: 117 WELRFVDQRTFGQMWWVSPEQRPEQIISGWGKLGPEPFSPDFSVAYLFQQLQQSRRPIKN 176 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +VAGIGNIY EAL+ + + P+ L + KL I VL ++ Sbjct: 177 ALLDQTLVAGIGNIYADEALFCSGIHPLTPCAELRPAQ------VEKLQGAIISVLQASL 230 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ ++++ G G + VY + GEPC CG I RI AGRST +C CQ Sbjct: 231 AEGGTTFSTFLNVRGVNGNYGGQALVYDRRGEPC-HTCGTAIERIKLAGRSTHFCPQCQ 288 >gi|326561880|gb|EGE12215.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 7169] Length = 302 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 138/305 (45%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 -----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++HLGMSGS + H+HV I N ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPRK-----HDHVLIDFAN-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG------------PEPADNSFNAIYLTHQFHKK 163 Y+DPRRFG + V P + + Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|121603812|ref|YP_981141.1| formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] gi|166198726|sp|A1VKP2|FPG_POLNA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120592781|gb|ABM36220.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] Length = 271 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 137/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + + LR+ + +G++++ V RR KY Sbjct: 1 MPELPEVEVTRLSFAERIAGARIEAVLVGKP-LRWPLGCE-TQQLQGQRVLAVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS + K+ + V T + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSVSF-GLNLPVTGKHDHFDMV---------TSLGTLRLHDPR 107 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP ++F+A+ + + +K LL + V G Sbjct: 108 RFGAVVYASGEDDAVAKKLLGRLGVEPLSDAFDALVFHQWLKGRKTAIKPLLLAGQAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P K K +L + IQ VL +A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTTKAS------LISKPRAARLHRAIQDVLTNAVAKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ VY + G PC C I+ I Q RS+FYC CQK Sbjct: 222 SNADGEAGHFQLDAMVYDRAGLPC-RVCAAPIKSIRQGQRSSFYCATCQK 270 >gi|254526097|ref|ZP_05138149.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] gi|221537521|gb|EEE39974.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] Length = 293 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 140/304 (46%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F + + +RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTVAFPSKKEDFIGGLQNSLLYKWNRRGK 60 Query: 59 YLLIELEGNLSIIVH-----LGMSGSFIIEHTSCAKPIK------NPQHNHVTISLTNNT 107 YL+ EL+ + F+I H K P + N Sbjct: 61 YLIAELKKLGNENGRFPLEKFSKKNGFLIVHLRMTGYFKFIDCSAQPCKHTRIRVFDNKN 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 N + Y D R FG M ++ L L +LGPEP F+ IYL K+ Sbjct: 121 N----ELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKVISKRTK 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R+ K+ L KL + I VL Sbjct: 177 SIKAILLDQTIVAGIGNIYADESLYSAGISPFREART------IKKNELIKLKESIVTVL 230 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GRST +C Sbjct: 231 KKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKAC-RKCGNLIERKKISGRSTHWCP 289 Query: 286 YCQK 289 CQK Sbjct: 290 KCQK 293 >gi|159897723|ref|YP_001543970.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] gi|238687075|sp|A9B0X2|FPG_HERA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159890762|gb|ABX03842.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] Length = 273 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 151/290 (52%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L + + L + P F+ A ++I V RRAK Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLIEL+ + ++IVHL M+G ++ H HV ++L N + ++D Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVAADEPADR----HTHVVVALDNGR-----ELRFHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG LV+ S + LGPEP + F + +K + +K LL+Q ++A Sbjct: 112 PRKFGRWSLVDRSGVAA--LNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW AK+ P+R SL N + +L + I+ VL ++I+ G++L + Sbjct: 170 GVGNIYADEALWLAKIHPLRSANSLNANE------IAELFEAIKTVLRNSIEHRGTTLVN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G+ G Q YG+TGEPC CG I RIV A RST C CQ Sbjct: 224 YRDAYGASGENQYHLEAYGRTGEPC-RRCGTPIERIVVAQRSTHICPVCQ 272 >gi|326563315|gb|EGE13582.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 46P47B1] gi|326563430|gb|EGE13695.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 12P80B1] gi|326565969|gb|EGE16130.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 103P14B1] gi|326568897|gb|EGE18966.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC1] gi|326575382|gb|EGE25307.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 101P30B1] gi|326576529|gb|EGE26437.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis CO72] gi|326578000|gb|EGE27864.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis O35E] Length = 302 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 -----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++HLGMSGS + H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPRK-----HDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG------------PEPADNSFNAIYLTHQFHKK 163 Y+DPRRFG + V P + + Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|296112372|ref|YP_003626310.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|295920066|gb|ADG60417.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|326571870|gb|EGE21875.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC8] Length = 302 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 -----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++HLGMSGS + H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPRK-----HDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG------------PEPADNSFNAIYLTHQFHKK 163 Y+DPRRFG + V P + + Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|307154764|ref|YP_003890148.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] gi|306984992|gb|ADN16873.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] Length = 277 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 134/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + + + L + F F G I RR K Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLSRTLAYPFSIAEFWQGITGTSINRWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL +L+ + VHL M+G + P+H + + + + + D Sbjct: 61 YLLAQLDSGGGLGVHLRMTGQLLWVKRETP----YPKHTRLRLF-----VGQDQELRFVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + L+ LG EP N F+ YL + ++K+ LL+Q++ Sbjct: 112 IRTFGKIWYIPPNQAPETIMTGLQKLGVEPFSNEFSREYLQQKLKNSRRSIKSVLLDQEV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY EAL+++ + P SL L KL I VL +ID GG++ Sbjct: 172 VAGIGNIYADEALFKSGIKPNAIACSLTPEQ------LEKLRLAICDVLQTSIDKGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G G + VYG+ G+ C CG +I R+ GRS +C CQ Sbjct: 226 SDFLSVTGVNGNYGGVAWVYGRGGKSC-RVCGTLIERVKLGGRSAHFCPKCQ 276 >gi|323342140|ref|ZP_08082373.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464565|gb|EFY09758.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 273 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L +K + I L D + G RR KYL Sbjct: 1 MPELPEVETIIRTLEKSLKGKQIDSINFIYPKLLEDQSEYSLENLVGSNFKAFHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E+ L I+HL M G F + A +H H I+ T + Y D R Sbjct: 61 WFEMSNGLHWILHLRMEGKFHLYDYDKA----PSKHTHCVINYDGGT------IHYLDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +F M +V+ +Y + LG EP D++ N Y+ + H +K+ LL+Q I+AGI Sbjct: 111 KFSRMAVVK--DPLKYLETKNLGYEPFDSNLNGEYVYQKIHHSKRVMKSILLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++ P+ + L++ + +L +AI AGG+++R Y Sbjct: 169 GNIYADEILFETQIHPLTTGSKITMKQCDS------LVETTKIILRNAIKAGGTTVRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQ + YG+ G+PC S C +++RIV +GRST +C CQK Sbjct: 223 SSLNVSGRFQINLNAYGRAGDPC-SRCNSIMKRIVVSGRSTVFCEKCQK 270 >gi|284992410|ref|YP_003410964.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] gi|284065655|gb|ADB76593.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] Length = 292 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +V + +H +R HF AA G+ + RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60 Query: 58 KYLLIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 KYL + +++ HLGMSG ++E + H + T+ Sbjct: 61 KYLWLPLAEGDGTPAGQALVAHLGMSGQLLVEKPTQPDET----HLRARFTFTDG----G 112 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPL-RTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + + +T PP + +P D +F+ + + ++ + +K A Sbjct: 113 RELRFVDQRTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTEVKRA 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++ G+GNIY E+LWRA+L R T L + + L++ ++ VL +++ Sbjct: 173 LLDQTLIGGVGNIYADESLWRARLHGNRPTDRLTRAQ------VGALLEGVRDVLHESLA 226 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV ++G GYF +VYG+ PC CG I R RS++ C CQ Sbjct: 227 QGGTSFDSLYVDVNGQSGYFSRHLAVYGQADRPC-PRCGTPIVRESFMNRSSYSCPQCQ 284 >gi|94265145|ref|ZP_01288909.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|94267032|ref|ZP_01290675.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452266|gb|EAT02912.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93454384|gb|EAT04685.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 343 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 96/333 (28%), Positives = 146/333 (43%), Gaps = 55/333 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + +I +LR P G I V RRAKY Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDNIETSGLSLRRPVPLAALRELAVGAVITGVERRAKY 81 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN------------- 106 LL+ L+ +++HLGM+G A +H+H+ I + + Sbjct: 82 LLLHLDNGALLVIHLGMTGKLY----PAATTEPPRKHDHLVIKMGTDLFFTSATPETTPG 137 Query: 107 -----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQF 160 + + V +ND RRFG + + + P L F A YL Sbjct: 138 MLVKNKSVPIFEVRFNDCRRFGLVAVYGSEEAVAPPLLVGLGPEPLDKRQFTAAYLHRCC 197 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ + +KN L++ ++V GIGNIY E L+ A +SP + +L+ Sbjct: 198 RQRRTPIKNLLMDNRVVVGIGNIYANEILFAAGISPFAPAAR------LGRLRAGRLVAA 251 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG------------ 268 +++L AI AGG+++ D+ + G GYFQ +VYG+ G PC C Sbjct: 252 ARQILTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPDDGADQPPAAG 310 Query: 269 ------------QMIRRIVQAGRSTFYCTYCQK 289 MI R +QAGR+TF+C CQK Sbjct: 311 ATAAKKVAKGAAPMIERRMQAGRATFFCPRCQK 343 >gi|75907494|ref|YP_321790.1| formamidopyrimidine-DNA glycosylase [Anabaena variabilis ATCC 29413] gi|123610190|sp|Q3MDP1|FPG_ANAVT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75701219|gb|ABA20895.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anabaena variabilis ATCC 29413] Length = 277 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 134/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ LHR F G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRTIAHPFSVGDFLNGITGDSISAWHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL + VHL M+G + + H V I + + + D Sbjct: 61 YLLASTTSAAWLGVHLRMTGQLLWLNQDEPLHK----HTRVRIFFEDQQ-----ELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M V + + + L L +P F YL ++ H + +K ALL+Q + Sbjct: 112 QRTFGQMWWVSSGMAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTALLDQSV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P + + L I +VL +I+AGG++ Sbjct: 172 VAGLGNIYADEALFKSGVLPETLCTEVQLKQ------IELLRTAIIQVLETSIEAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + GEPC CG +I+RI GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFCRQCQ 276 >gi|311898537|dbj|BAJ30945.1| putative formamidopyrimidine-DNA glycosylase/AP lyase [Kitasatospora setae KM-6054] Length = 285 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + FSA RG+ + + RR Sbjct: 1 MPELPEVEVVRRGLARWAAGRTVAEARVLHPRAVRRQAGGADEFSALLRGRTLGEPQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L LS+I HLGMSG +++ A H + T+ + + Sbjct: 61 KYLWVPLGDGLSMIGHLGMSGQLLVQEPEMADSP----HLRARLRFTDGGT----ELRFV 112 Query: 118 DPRRFGFMDLVETSL---KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + + E + L + +P D F+ K + +K ALL+Q Sbjct: 113 DQRTFGGLAVEEAEDGDPEATPRSLAHIARDPLDARFDDDAFARALRAKRTTVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR++L R T +L + +L+ + V+ A+ GG+ Sbjct: 173 TLVSGVGNIYADEALWRSRLHFDRPTATLTR------PAALELLGHARDVMTAALAVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF YG+ GEPC CG +RR RS++ C CQ+ Sbjct: 227 SFDSMYVNVNGESGYFSRDLDAYGREGEPC-RRCGTPMRRDAWMNRSSYSCPKCQR 281 >gi|296270739|ref|YP_003653371.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] gi|296093526|gb|ADG89478.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] Length = 294 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 28/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+IRR L + + + A +G+ ++ RR KYL Sbjct: 1 MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRRNTGDLPARLKGRPLLSAERRGKYL 60 Query: 61 LIELEGNLSII---------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L VHLGMSG ++ H V + ++ Sbjct: 61 WLPLGDGDPADPREAEEALVVHLGMSGQLLLTDRGAPAER----HLRVRLGFADD----G 112 Query: 112 YRVIYNDPRRFGFMDLVETSLKY---QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + D R FG M + + Y P+ + P+P + +F+ H+ ++ + LK Sbjct: 113 PELRFVDQRTFGHMLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFAHRLTRRRTGLK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +++G+GNIY EALWRA+L R T +L + +L+ +++ VL DA Sbjct: 173 RALLDQSLISGVGNIYADEALWRARLHWARATETLTAAE------VTELLAQVRAVLTDA 226 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 I GG+S YV+++G GYF + +VYG+ EPC CG +RR RS++ C C Sbjct: 227 IAQGGTSFDSLYVNVNGESGYFGRSLAVYGRQDEPC-PRCGAPVRRDPFMNRSSYSCPKC 285 Query: 288 Q 288 Q Sbjct: 286 Q 286 >gi|332670941|ref|YP_004453949.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] gi|332339979|gb|AEE46562.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] Length = 302 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 20/301 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ +HR ++R P F+ G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG 60 Query: 58 KYLL-IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + + + +++ HLGMSG ++ + H V ++L + + Sbjct: 61 KFLWLLLDDEDAALMAHLGMSGQLLVRSAQDLRDEVRHPHLRVRLALDDGSALDFVDQRT 120 Query: 117 NDPRRFGFMDLVETSLKY--------QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + P+ + + D S + L + + +K Sbjct: 121 FGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEAVRARRTGIK 180 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +V+GIGNIY E LWRA+L R T +L + + + + Q+V+ A Sbjct: 181 RALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAE------VERALDGAQEVMTAA 234 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G+ GYF + +VYG+ G PC CG +RR RS++ C C Sbjct: 235 LAQGGTSFDALYVNVNGASGYFDRSLAVYGQAGRPC-PRCGAAVRRDEFMNRSSYTCPVC 293 Query: 288 Q 288 Q Sbjct: 294 Q 294 >gi|320449520|ref|YP_004201616.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] gi|320149689|gb|ADW21067.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] Length = 265 Score = 177 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 139/290 (47%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ + + + + G+++ + RR K+L Sbjct: 1 MPELPEVETTRRKLLPLFVGKRLLQLEHRDPRRYRH-----TERAEGQRVEGIRRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L ++VHLGM+G F +E + H V L + + ++DPR Sbjct: 56 LFALTEGWEMVVHLGMTGGFRLERSP---------HTRVAFQLED------REIFFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +V + P L LGPEP F LK LL Q++ AG+ Sbjct: 101 RFGRIWVVRKGDYQKIPLLLQLGPEPLSEDFRFHEFWLGLKGSQKPLKALLLEQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA+LSP R+ R L + +L ++KVL +A+ GGS+L D Sbjct: 161 GNIYADEALFRARLSPFRRGRELTEAE------AQRLFAALKKVLAEALLLGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+TG PC CG I + V AGR T +C CQ Sbjct: 215 YQQPDGLPGSFQMRHAVYGRTGLPC-PVCGTPIAKRVVAGRGTHFCPRCQ 263 >gi|94266953|ref|ZP_01290604.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452358|gb|EAT02983.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 342 Score = 177 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 92/328 (28%), Positives = 143/328 (43%), Gaps = 46/328 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + + +LR P G I V RRAKY Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDSVEASGLSLRRPVPLAALCELAVGAVITGVERRAKY 81 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK-------- 111 LL++L+ +++HLGM+G T+ + + L + T + Sbjct: 82 LLLQLDNGSLVVIHLGMTGKLYPAATTEPPRKHDHLVIKMGTDLFFTSTTPEATPGMLVK 141 Query: 112 ------YRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKN 164 + V +ND RRFG + + P L F A YL ++ Sbjct: 142 NKSVPIFEVRFNDCRRFGLVAVYGPGEAVAPPLLVGLGPEPLDKQQFTAAYLHRCCRQRR 201 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +KN L++ ++V GIGNIY E L+ A +SP + +L+ +++ Sbjct: 202 TPIKNLLMDNRVVVGIGNIYANEILFAAGISPFT------SAARIGRRRAGRLVAAARQI 255 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC----------------- 267 L AI AGG+++ D+ + G GYFQ +VYG+ G PC C Sbjct: 256 LTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPGYADHPPAAGAATTK 314 Query: 268 ------GQMIRRIVQAGRSTFYCTYCQK 289 +I R +QAGR+TF+C CQ+ Sbjct: 315 KVAKGVKPVIERQIQAGRATFFCPRCQR 342 >gi|257454005|ref|ZP_05619279.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] gi|257448483|gb|EEV23452.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] Length = 296 Score = 177 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ +L ++ N TV + + + LR+ P + ++ID+ RRAKYL Sbjct: 1 MPELPEVQTTATSLQPLL-NQTVEKVSVFQPKLRWVVPDDLVS-LIDYQLIDIERRAKYL 58 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + +++HLGMSGS K H+HV ++ + ++ Y+ Sbjct: 59 ILTFKGGAAQKKLLIHLGMSGSLQQHPVGFDKRK----HDHVILTFNDGKKL--TQLHYH 112 Query: 118 DPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + ++ K E + ++ ++ +K+ ++ Q+I Sbjct: 113 DPRRFGMLLWLDDYEDKLITHLGVEPLSEDFSADYLYHHIHNRKKPIERPIKSVIMAQEI 172 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ +K+ P+ + L L+ I++VL +I+ GGS+L Sbjct: 173 VVGVGNIYATESLFLSKIHPLTPAHLIGHEQ------LTTLVAHIRQVLQTSIEKGGSTL 226 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ DG GYFQ VYG G C +CG I + R++ +C CQ Sbjct: 227 KDFTVADGQTGYFQQTLLVYGHKGADC-PSCGTTIDNVKINQRASTFCPTCQ 277 >gi|332710075|ref|ZP_08430030.1| DNA lyase [Lyngbya majuscula 3L] gi|332351218|gb|EGJ30803.1| DNA lyase [Lyngbya majuscula 3L] Length = 282 Score = 177 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 96/298 (32%), Positives = 140/298 (46%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IR L V + ++ L R P F A + I D RR K Sbjct: 1 MPELPEVETIRLGLNQVTTGQEIQGGEVLLSRTIAHPISPKDFLAQLKTVTISDWHRRGK 60 Query: 59 YL-----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL + + + VHL M+G + + P+H V + NN Sbjct: 61 YLLAKLTKSDTDQAGWLGVHLRMTGQLLWLSQDQPQ----PKHTRVRLFFPNNQ-----E 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M + S + L+ LGPEP F+ YL + H + +K AL Sbjct: 112 LRFIDQRTFGRMWWIPPSHLPETIITGLKQLGPEPFSQEFSTDYLVSKLHHRQRAIKTAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAGIGNIY EAL+ + + P + L + KL + +VL AI++ Sbjct: 172 LDQSLVAGIGNIYADEALFLSGIRPETLCKDLGLEQ------IEKLSIAVIQVLEKAIES 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D++++ G G ++ VYG+TGEPC C I+R GRS +C CQ+ Sbjct: 226 GGTTFSDFINVQGVNGNYKGIAWVYGRTGEPC-RICSTPIQRTKLVGRSAHFCPNCQR 282 >gi|118582007|ref|YP_903257.1| formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] gi|166198725|sp|A1AV29|FPG_PELPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118504717|gb|ABL01200.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] Length = 267 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + V + + LR P A +G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERDITGKQVQQVLVRAPKLRLPVPPELEEALKGRTVRAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +IVHLGM+G + HT +H+HV I T+ + + ++DPR Sbjct: 61 LLE-CEAGWLIVHLGMTGFLRLLHTP----QLPGKHDHVDIVFTDGS-----VLRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T ++P L +GPEP +F+ YL + +K ++N IVAG+ Sbjct: 111 KFGTIAW-TTDSLDKHPLLAGIGPEPLTAAFSGAYLFRVSRTRRVVVKLLIMNMAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL + +L I++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRAASSLSRTE------CERLAVTIREVLQESIDLGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G++ Y AF VYG+ C S CG + + RST +C CQ+ Sbjct: 220 VEEGTVTYHPLAFDVYGRGHGTCTS-CGGALEAVRLGNRSTVFCPRCQQ 267 >gi|332977506|gb|EGK14279.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. 1501(2011)] Length = 316 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +L ++ N V + + + LR+ P + G + D+ RRAKYL Sbjct: 1 MPELPEVETTRTSLKPLL-NKKVETVEVFQPKLRWPVPQDIDS-LTGYVLQDIERRAKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP-----------------IKNPQHNHVTI-S 102 +++ + ++ S I K + +H+HV + Sbjct: 59 ILKFRRDNKDSLNNKQSNIINIASARDTKALIIHLGMSGSLQQFPVGTEKRKHDHVIMQY 118 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVET--------------SLKYQYPPLRTLGPEPAD 148 + + ++ Y+DPRRFG + ++ + L ++ Sbjct: 119 ASADATQTPIQLHYHDPRRFGAILWLDDYEQKLLGHLGIEPLDEAFSGDYLYDKIHRLSE 178 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 N + ++K +++Q V G+GNIY E+L+ + + P L Sbjct: 179 NKVRKPQSKTKLKPITRSIKAVIMDQVFVVGVGNIYATESLFLSGIHPSTPADKLT---- 234 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 K L L + I+ +L AI GGS+LRD+ G+ GYFQ VYGK +PC CG Sbjct: 235 --KSQLSVLAEHIRAILKRAITQGGSTLRDFTVASGTTGYFQQTLLVYGKHKQPC-PTCG 291 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 I ++ GR++ +C CQ Sbjct: 292 TTIDKVTITGRASTFCPNCQ 311 >gi|281307047|pdb|3GO8|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-Loop Deletion Complex Length = 257 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 35/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG+ Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGN----- 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 220 -----------HHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|239928704|ref|ZP_04685657.1| formamidopyrimidine-DNA glycosylase [Streptomyces ghanaensis ATCC 14672] gi|291437028|ref|ZP_06576418.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] gi|291339923|gb|EFE66879.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] Length = 286 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + +R F+ G +I RR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLEGHRIGTADRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++ HLGMSG +++ + +H + + ++ +T + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHDAP----DEKHLRIRVRFADDLHT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ T + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYESPTAGFTRPRTL------LLLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPVRRRPWMNRSSYFCPKCQR 280 >gi|51891987|ref|YP_074678.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] gi|81692172|sp|Q67R59|FPG_SYMTH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|51855676|dbj|BAD39834.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + + + + + P F+A G D+ RR KY Sbjct: 1 MPELPEVETVRRTLCPRVVGRRIRRVEILTPRQIYHPDPATFAADLEGAVFDDIERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L G ++ HL MSG + + P+H HV L + + Y D Sbjct: 61 LLFRL-GPRILVAHLRMSGHLYVCGPEAPR----PRHLHVVFHLDDG-----GELRYADQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L+ + P L LGPEP F L + +++++K ALLNQ +VAG Sbjct: 111 RKFGGFHLLGPGGEGMPPGLANLGPEPLSPEFTPQVLAERLAGRHTSIKAALLNQALVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A++ P R+ SL + +L I++VL+ A++ G++ Y Sbjct: 171 LGNIYADEALFCARIHPAREAGSLTPAE------VERLHGCIRRVLLRAVERRGTTFSLY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G + V+ + GEPC CG IR++ A R T +C CQ Sbjct: 225 RDGEGNEGDMYDELQVFDRAGEPC-PVCGTPIRKVAVAQRGTHFCPRCQ 272 >gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] Length = 267 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+R+L + TVT + + R ++ A G +IIDV+RR KYL Sbjct: 1 MPELPEVETIKRSLAP-IVGKTVTGLMVLRSDIVKRCDFGVKNA-VGSEIIDVTRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L ++VHLGM+G ++ +S H H+ I+L + V Y DPR Sbjct: 59 VIKLSCARHLVVHLGMTGRLLMVASSEP----IAAHTHMVINLEGEKD-----VRYQDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V+ +LGPEP D SF L + ++++++K LL+Q +VAGI Sbjct: 110 RFGNISFVK----DTGGFFSSLGPEPLDPSFGPEELARRLKRRSASIKPVLLDQGVVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A L P R L + + +L I++V+ AI+ G++ RDY Sbjct: 166 GNIYADEILFAAGLHPARGASELNEYE------ISRLHAAIKEVITRAIECRGTTFRDYR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G FQ +VYG+ G+PC CGQ +++ V GR+T YC CQ Sbjct: 220 DGFNQPGQFQTHLAVYGRYGQPC-PKCGQPVQKTVIGGRTTHYCAICQ 266 >gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 276 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + N+T+ D + N+ + P F A +GK I R KY Sbjct: 1 MPELPEVETVVRTLEHQLGNVTIKDCHVLWDNIIAYPTPQTFCAQIKGKTIQHYERYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L I H+ M G F I+ + H HV L + ++ Y+D Sbjct: 61 LLFDLGSM-MWIAHMRMEGKFYIQKSDEPYDK----HVHVLFDLQDGR-----QLRYHDT 110 Query: 120 RRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L E +QYP + +G + D YL H HK+ LK ALL+Q ++A Sbjct: 111 RKFGKMYLYEKRKDIHQYPCFQNIGLDAFDERLTPTYLYHALHKRKIVLKAALLDQSVIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + + P K L + + +L+QE +++L AI GG+++R Sbjct: 171 GIGNIYADEICFALGMHPETKIYHLRKKDF------ERLLQETRRILQGAIRYGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C C I++I A R T YC CQ+ Sbjct: 225 YTSSLGVDGRFQLKLKVHAKKGEKC-PVCQGEIKKITVATRGTCYCPTCQR 274 >gi|290957119|ref|YP_003488301.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260646645|emb|CBG69742.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 286 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D+ + +R P F+ +G +I + RR Sbjct: 1 MPELPEVEVVRRGLARWVAHRTVADVEVLHPRAIRRHLAGPEDFAHRLKGHRIGEPGRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E ++ HLGMSG +++ A + +H + + ++ T + + Sbjct: 61 KYLWLPVEDTGIAVLAHLGMSGQLLVQPHEAA----DEKHLRIRVRFADDLLT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+A +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDAEAFHQALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTAGFTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGQSGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPTCQR 280 >gi|67925991|ref|ZP_00519260.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] gi|67852167|gb|EAM47657.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] Length = 278 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ + + L + F + RR K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIEGAEVLLDRTLAYPPSSQEFLDQIQNATFDKWQRRGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ L+ + VHL M+G + + H + + + + + Sbjct: 61 YLLVPLQEKKGCLGVHLRMTGQLLWVKENEPLSR----HTRLRLFCN-----QSQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V + + L+ LGPEP F+ Y + ++ N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPNQPPENIITGLQKLGPEPFAKEFSIDYFIDRLKRRQRNIKTILLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P + L + +L + + +VL AID GG++ Sbjct: 172 IVAGMGNIYADEALFKSGILPTTLGKDLTPQQ------VKRLREAMIEVLKTAIDQGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G + VYG+ +PC CG I +I GRS+ +C CQ Sbjct: 226 FSDFRGVTGINGNYGGVAWVYGRHKQPC-RVCGTPIEKIKLGGRSSHFCPQCQ 277 >gi|326569197|gb|EGE19258.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC7] Length = 302 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVKHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 -----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++HLGMSGS + H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPRK-----HDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG------------PEPADNSFNAIYLTHQFHKK 163 Y+DPRRFG + V P + + Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|166365259|ref|YP_001657532.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] gi|166087632|dbj|BAG02340.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] Length = 285 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 130/292 (44%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + + ++ L + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGQKIIGGEVLLQRTLAYPNCEATFLQGIAQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + P H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPL----PIHTRLRFFFANQQ-----ELRFVD 111 Query: 119 PRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + L+ LG EP D +F A YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTADYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P + + L + I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHPQTAAN------LLKIEQIDLLTKNIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + VYG+ GE C CG I RI +GRS +C CQ Sbjct: 226 SDFLHVTGVNGNYGAMAWVYGRNGENC-RLCGATIARIKLSGRSAHFCPQCQ 276 >gi|284044548|ref|YP_003394888.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] gi|283948769|gb|ADB51513.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] Length = 284 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+ + R+ P+ A G++I RR Sbjct: 1 MPELPEVETVRRQLEPRLVGRTLVAYAVRDA--RWTEPRSPNEVVAPLVGRRIEGFHRRG 58 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL+ E E L +++HL M+G+ + + + + + + + Sbjct: 59 KYLIWEAEDELFLLIHLRMTGNLLYDAPEGTL------YTRAHFGFDDGHD-----LRFV 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG L+ + LG EP + F A +L + +K LL+QK + Sbjct: 108 DPRRFGTGWLLAGQSELDAYLDARLGVEPFSDGFTAEHLRRLARGSRAPIKAFLLDQKRI 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY EAL+R+++ P+R+ + L + L IDA G+S+ Sbjct: 168 AGIGNIYADEALFRSRIHPLRQAGRVTTAQW------ELLRDAVVDALSAGIDARGASID 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ +DG+ G FQ+ F ++ + + CL CG IR+I+ AGR T+ C +CQ Sbjct: 222 DFRDLDGARGSFQDRFLIHRRADDGCLE-CGGPIRKILAAGRGTYVCEHCQ 271 >gi|93117321|gb|ABE99578.1| fpg [Neisseria meningitidis] Length = 258 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQT-GILL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|37522976|ref|NP_926353.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] gi|39931205|sp|Q7NFW7|FPG_GLOVI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|35213979|dbj|BAC91348.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] Length = 284 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 141/294 (47%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIID-VSRRA 57 MPELPEVE +RR+L++ + V + + R + P F +G+ D + RR Sbjct: 1 MPELPEVETLRRDLLIHLPGERVVGVEVLRSDSVGYPADPAIFIEQMQGQIFSDRMLRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL+ ++ VHL MSG + H V I + + + + + Sbjct: 61 KYLLLYFARGAALGVHLRMSGRLLWRCGEAPLEP----HTRVRIPMASG-----HELRFE 111 Query: 118 DPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + L+ + L LGPEP F+ YL +F +N +K+ALL+Q+ Sbjct: 112 DMRVFGRLWLIPVGVPPERVMGGLTRLGPEPFAEMFDGPYLAGRFAGRNQPVKSALLDQQ 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY EAL+ + + P L L +L + + KVL I G++ Sbjct: 172 LVAGVGNIYADEALFSSGIHPALPVGGLDAA------ALERLHRAVVKVLEAGIAQRGAT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LR+Y G G + VYG+ G+PC C I RI AGRST +C CQ+ Sbjct: 226 LRNYTDAQGINGNYAGTAWVYGRKGQPC-RVCNTPIERIRLAGRSTHFCPTCQR 278 >gi|266618592|pdb|3GPU|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec4-Loop Deletion Complex Length = 256 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 36/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L ++I HL M G + + H HV T+ + + Y D Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ G Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKG------- 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 218 ----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 256 >gi|160914227|ref|ZP_02076448.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] gi|158433854|gb|EDP12143.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] Length = 275 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 140/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + D + N+ F R KKI R KYL Sbjct: 1 MPELPEVETVVRTLEHQLQQIEIMDCRVLWDNIIAMDTQAFIETIRHKKIQGYHRHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L IVHL M G F ++ A +H HV SL++ + Y+D R Sbjct: 61 MFDLGS-YDFIVHLRMEGKFYVQ----APQEPYDKHTHVIFSLSDGR-----ELRYHDTR 110 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M L +YP +GP+ D A L HKK + LK LL+Q ++AG Sbjct: 111 KFGKMVLYPKLENYQEYPCFAHIGPDAFDEELCADSLYRMLHKKKTYLKAVLLDQSVMAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + ++ P K L + + LI E +++L AI AGG+++R Y Sbjct: 171 IGNIYADEICYAMRMHPETKISHLRKKDFAV------LITETRRILSGAIRAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + GE C NC I++I AGR T+YC CQK Sbjct: 225 TSSLGVDGRFQLKLKVHARKGEAC-PNCQGEIKKITVAGRGTYYCPTCQK 273 >gi|148652194|ref|YP_001279287.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] gi|148571278|gb|ABQ93337.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] Length = 307 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 41/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++K V + +++ LR+ P +G + V RRAKYL Sbjct: 1 MPELPEVETTKTSLKPLLK-KQVAQVDVYQPKLRWPVPDDIH-RLQGYTLQQVERRAKYL 58 Query: 61 LIE--------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 +++ + SII+HLGMSGS K H+H+ + + Sbjct: 59 ILQFQRLPSQSGAKTANMPDTKSIIIHLGMSGSLQQFPVGTDKRK----HDHLIMQYKAD 114 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 ++ Y+DPRRFG + + + + L + + H+ + Sbjct: 115 DTKPAIQLHYHDPRRFGAILWFDDYAEKLFDHLGIEPLDDQFSGDYLFDKIHRVAENAIR 174 Query: 167 LKN--------------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 + +++Q++V G+GNIY E+L+ + + PI + K Sbjct: 175 SCHNKPLLKPISRPIKAVIMDQEVVVGVGNIYATESLFLSGIHPITPA------DQLSKV 228 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L +L++ I+++L +I GGS+L+D+ G+ GYFQ VYGK PC CG I Sbjct: 229 QLAELVKYIKEILKRSITQGGSTLKDFTVASGTTGYFQQTLLVYGKYKSPC-PTCGAGID 287 Query: 273 RIVQAGRSTFYCTYCQ 288 ++V GR++ +C CQ Sbjct: 288 KVVITGRASTFCPTCQ 303 >gi|25028531|ref|NP_738585.1| formamidopyrimidine-DNA glycosylase [Corynebacterium efficiens YS-314] gi|259507586|ref|ZP_05750486.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|29611717|sp|Q8FP17|FPG_COREF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23493816|dbj|BAC18785.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259164765|gb|EEW49319.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 285 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ +H + R A G ++ +RR Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60 Query: 58 KYLLIELEGNLSII-------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L +EL+ VHLGMSG +++ H L + Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQMLVKSPDATLNP----HLRARAELDDGN--- 113 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V + D R FG+ L E + + + D++ + L KN+ +K Sbjct: 114 --EVWFVDQRTFGYWWLGELVD-GVPGRVSHIARDLLDDALDIPALAAVLKTKNTEIKRL 170 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LLNQ+IV+GIGNIY E LW A + P +K + L L++ ++V+ A+D Sbjct: 171 LLNQEIVSGIGNIYADEMLWEAGIHPRQKASRIS------LTRLVALLEAGREVMTRALD 224 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G+ GYF + + YG+ G+PC CG I R R + +C CQK Sbjct: 225 QGGTSFDALYVNVNGASGYFSLSLNAYGQAGKPCA-RCGTPIARETFMNRGSHFCNRCQK 283 >gi|91226564|ref|ZP_01261288.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] gi|91189038|gb|EAS75320.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] Length = 252 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 93/272 (34%), Positives = 135/272 (49%), Gaps = 20/272 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M T+ LR+D P G+ I +SRRAKYLLIE + IVHLGMS Sbjct: 1 MVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYLLIETNT-GTAIVHLGMS 58 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + +H+HV + L++ + YNDPRRFG + Sbjct: 59 GSLRVLDADFP----PAKHDHVDLKLSSGKI-----LRYNDPRRFGAWLWCAPGESHAV- 108 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L +GPEP FNA Y+ + K +K +++ K+V G+GNIY E+L+++++ P Sbjct: 109 -LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGVGNIYANESLFKSRIHPS 167 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R L L++ I+ L AI GG++L+D+ DG GYF VYG Sbjct: 168 RPAGKLTSQEW------RLLVENIKMTLEIAITQGGTTLKDFAQADGKPGYFAQELLVYG 221 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 K GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 KPGEPC-PECGERLQELKIGQRNTFFCSECQK 252 >gi|50954669|ref|YP_061957.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648675|sp|Q6AFJ3|FPG_LEIXX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50951151|gb|AAT88852.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 297 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 21/303 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + ++L+ P F + G+ + +RR Sbjct: 1 MPELPEVEVVRAGLAPAVTGATILGVEVFELRSLKRHDPLAGSFESLLTGRSMQTPARRG 60 Query: 58 KYLLI--ELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNT 107 K+L I + +I+ HLGMSG ++ + I++P+H + + + Sbjct: 61 KFLWIPLDSSPRSAIVAHLGMSGQILLRDPGTVENGLLRIRLYIEHPEHGELWVHFVDQR 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V P G + T + + +P D F+ ++ S + Sbjct: 121 LFGSMAVDALVPTVDGAPAGLGTDEALLPAQVSHIARDPLDPVFDDAAFAAVLARRRSGI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGNIY E+LW A++ +L + + L+ E+++VL Sbjct: 181 KRVLLDQTLISGIGNIYADESLWAARIHYDHPATALSRPR------VRTLLAELRRVLGR 234 Query: 228 AIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G+ GYF + VYG+ G+PC CG I R R + +C Sbjct: 235 ALAEGGTSFDAQYVNVNGASGYFSRSLHVYGRQGQPCD-RCGTAIVRESFMNRGSHFCPR 293 Query: 287 CQK 289 CQ+ Sbjct: 294 CQR 296 >gi|38234118|ref|NP_939885.1| formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|81698520|sp|Q6NGH4|FPG_CORDI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|38200380|emb|CAE50068.1| Putative formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae] Length = 296 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 27/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+TD+ + + +G+++ + RR Sbjct: 1 MPELPEVEVVRRGLTPYVLGATITDVAVEHPRSIRTIEGGAAELIGSLQGREVTRIGRRG 60 Query: 58 KYLLIELEGNLSIIV---------HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L EL G+ HLGMSG +I+ + A H + ++ + Sbjct: 61 KFLWFELTGHGDYACGFPQQGLLVHLGMSGQMLIKTQNSALHP----HRRIRTTIVRSDA 116 Query: 109 TKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + + + D R FG+ VET+ + + + D L KKNS Sbjct: 117 QECFELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLKRENLARLIRKKNS 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LLNQ+IV+GIGNIY E LW A++ P L L L++ Q+V+ Sbjct: 177 EIKRVLLNQEIVSGIGNIYADEMLWAARIHPQTPASHLSVAQ------LSNLLEHGQRVM 230 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+D GG+S YV+++G GYF + YG+ G+ C CG I R A RS+ +C Sbjct: 231 NAALDQGGTSFDSLYVNVNGQSGYFDVSLHAYGQQGQACD-RCGSNIIREKFANRSSHFC 289 Query: 285 TYCQ 288 CQ Sbjct: 290 PRCQ 293 >gi|257058047|ref|YP_003135935.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] gi|256588213|gb|ACU99099.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] Length = 282 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 135/297 (45%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + D + ++L + F ++ RG + RR K Sbjct: 1 MPELPEVETVRRGLNQFTSGKIIEDAEILLTRSLAYPTSVDEFLSSIRGVSFGEWQRRGK 60 Query: 59 YLLIELEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L + VHL M+G + + S H + + N Sbjct: 61 YLLGTLVKGSGEAAGWLGVHLRMTGQLLWVNQSEPLQT----HTRLRLFCGENQ-----E 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V Q L+ LG EP + F+ Y T + + N+K L Sbjct: 112 LRFVDIRTFGKVWWVPPKETPQRVITGLKKLGVEPFSDEFSVDYFTTKLKGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY E L+++ + P ++L + +L I +VL AI Sbjct: 172 LDQEIVAGLGNIYADEVLFKSGVHPTTLGKNLKPQQ------IEQLRIAIIEVLETAIVH 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|113954166|ref|YP_729781.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] gi|113881517|gb|ABI46475.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] Length = 290 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 136/304 (44%), Gaps = 32/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + ++D+ + R P F + ++ + RR K Sbjct: 1 MPELPEVETVRRGLANRLDQFVISDLEVCRDRAIASPGGPECFESGLLNCRVGNWMRRGK 60 Query: 59 YLLIELEGN------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 YL EL VHL M+G F +H V Sbjct: 61 YLYSELYRPGSAEANSAEESAGYWGVHLRMTGQFQWIEDDTP----PCKHTRVRFW---- 112 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 N K + + D R F M V + L+ LGPEP F YL +F Sbjct: 113 -NAKGQELRFVDLRSFAEMWWVPPDTAVESIITGLKKLGPEPFSQDFKTQYLQERFKGST 171 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++K ALL+Q IVAG GNIY E+L+ A + P L + L KL + + ++ Sbjct: 172 RSIKAALLDQSIVAGTGNIYADESLFAAGICPQTPAGQLNRKQ------LEKLRECLIEI 225 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +I AGG++ D+ ++G G + +VY +TG+PC CG+ I RI AGRST +C Sbjct: 226 LELSIGAGGTTFSDFRDLEGVNGNYGGQAAVYRRTGQPC-PKCGKAIERIKLAGRSTHWC 284 Query: 285 TYCQ 288 + CQ Sbjct: 285 SSCQ 288 >gi|328950379|ref|YP_004367714.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] gi|328450703|gb|AEB11604.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] Length = 264 Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 142/291 (48%), Gaps = 31/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R+ L ++ + I R G+++ + RR K+ Sbjct: 1 MPELPEVETTRQALRPYLEGRAIRAIHHTDPARYRRTEDA------VGRRVEVLRRRGKF 54 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ LEG L ++VHLGM+G F H V + + + + +NDP Sbjct: 55 LIAALEGGLELVVHLGMTGGFRFAE---------GPHVRVRLEVPDRP------LYFNDP 99 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +V + P L LGPEP ++F + +K LL Q++VAG Sbjct: 100 RRFGRWWVVPAGAYREIPLLDRLGPEPLSDAFTLEGFREGLARTARGVKAVLLAQEVVAG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA + P R + + +L I++VL +A+ AGGS+L+D Sbjct: 160 LGNIYADEALWRAGVHPARPANT------LEVGAIARLYTAIREVLAEAVAAGGSTLQDG 213 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG++G FQ VYG+ G PC+ CG I + V AGR T +C CQ Sbjct: 214 TYRRPDGALGRFQVQHKVYGRPGAPCV-RCGTPILKAVVAGRGTHFCPRCQ 263 >gi|88658566|ref|YP_507413.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] gi|88600023|gb|ABD45492.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] Length = 270 Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ R L + T+ DI ++R +LR + + V R+ KY+ Sbjct: 1 MPELPEVEIVCRALSSQILGKTILDIEVNRYDLRVPVTQNLCDIAVNSSVFQVLRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L +++HLGMSG+ I IK +HNHV +NN +I+NDPR Sbjct: 61 VLVLSNQYYLVIHLGMSGNLIY----SESYIKQKKHNHVIFHFSNNN-----LLIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ S ++ + + + N +Y T +L L+N K V GI Sbjct: 112 RFGIVILLTYSQYIEFFKNFGVDALSDEFNTNYLYNTSNKRCTIKSL---LMNNKFVTGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A ++P R + L +I ++ +L+ +I+ GGSS++DY Sbjct: 169 GNIYSTESLFLAGIAPNRFVKDLSIIE------CNNIIDGVKNILLYSIENGGSSIKDYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN F VY +T + C C I I Q GRSTF+C YCQ Sbjct: 223 SPFGIRGTFQNHFLVYNRTRQQCYK-CNSSILVIKQNGRSTFFCPYCQ 269 >gi|113474804|ref|YP_720865.1| formamidopyrimidine-DNA glycosylase [Trichodesmium erythraeum IMS101] gi|123352603|sp|Q117D2|FPG_TRIEI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110165852|gb|ABG50392.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Trichodesmium erythraeum IMS101] Length = 300 Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 33/311 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVEI+++ L + N + + + L + F GK I R+ K Sbjct: 1 MPELPEVEIVKQGLNQLTLNKRILGGEVLLERTLAYPISVADFLRGLEGKAIAQWHRQGK 60 Query: 59 YLLIELEGNL--------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YLL +L + VHL M+G + + + H V + Sbjct: 61 YLLAQLYKWGKKNSKLQEYENEDGWLGVHLRMTGQLLWVNPEESLHK----HTRVRLFFG 116 Query: 105 NNTNTKK----YRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTH 158 +N++ K Y + + D R FG M V + L+ LG EP F+ YL Sbjct: 117 HNSSGDKDSSNYELRFVDQRTFGKMWGVPPGKEISKVITGLQQLGLEPFSPEFSPKYLNK 176 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +K++ +K ALL+Q +AG+GNIY EAL+ + + P + L + + +L Sbjct: 177 KLYKRHRPIKTALLDQTTIAGLGNIYADEALFLSGIRPTTICKDLTEKQ------IEQLH 230 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 I KVL AI+AGG++ +++++ G G + VY + G+PC C + +I AG Sbjct: 231 LAILKVLQTAINAGGTTFSNFLNVKGVNGNYGGVAWVYSRAGQPC-RICNTPLEKIKLAG 289 Query: 279 RSTFYCTYCQK 289 RST +C CQK Sbjct: 290 RSTHFCPQCQK 300 >gi|171060164|ref|YP_001792513.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] gi|238689107|sp|B1Y3P5|FPG_LEPCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170777609|gb|ACB35748.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] Length = 276 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 143/294 (48%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + TV + L + LR+ G++I +++RR KY+ Sbjct: 1 MPELPEVEVTRLGLVDRIGGATVRALQLGKP-LRWPIGVA-PQQLAGQRIGELARRGKYI 58 Query: 61 LIELEGNLSII----VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + L+ + HLGMSGS E A+ H+HV + + + Sbjct: 59 WMPLQDGSTPAGGLLWHLGMSGSLRFE----AQLPPPGPHDHVELVTDRGS------LRL 108 Query: 117 NDPRRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + + L LG EP ++ F A L + +K ALL Sbjct: 109 TDPRRFGAVVWSPSLQAGCAARLLGGLGVEPLEDGFTASVLHQGLRGRRVAIKQALLAGD 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IV G+GNIY EAL+ A + P + L +L+Q I++VL A+ AGGS+ Sbjct: 169 IVVGVGNIYCSEALFVAGIDPRLAAQRLSLAR------CERLVQAIRQVLRQALMAGGST 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ G G FQ VY + +PC CG ++RRIVQ R+T++C CQ+ Sbjct: 223 LRDFRDAHGMGGAFQLQAQVYDRADQPC-RRCGALVRRIVQGQRATYFCPVCQR 275 >gi|145296036|ref|YP_001138857.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum R] gi|166215621|sp|A4QFD9|FPG_CORGB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|140845956|dbj|BAF54955.1| hypothetical protein [Corynebacterium glutamicum R] Length = 286 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 138/301 (45%), Gaps = 29/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ + + A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L + E +L ++VHLGMSG +I+ H I L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDAPISP----HLRAKIELDNGD-- 114 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 V + D R FG+ L + + + + D S + + + S +K Sbjct: 115 ---EVWFVDQRTFGYWWLGDLVD-GVPERVSHIATDVLDESADFSAIARNLKSRKSEIKR 170 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A+ Sbjct: 171 LLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKAL 224 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + + YG+TGEPC CG I R R + YC CQ Sbjct: 225 AQGGTSFDALYVNVNGNSGYFSLSLNAYGQTGEPCG-RCGTQIVRENFMNRGSHYCPNCQ 283 Query: 289 K 289 K Sbjct: 284 K 284 >gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 286 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 83/289 (28%), Positives = 129/289 (44%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+ +L ++ + + L P F G ++ RRAK+ Sbjct: 1 MPELPEVETIKNDLRGLVVGSRIERAEVREPALVEQPPQEEFVRRLGGARVTGARRRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++EL+ +++ L + G ++ + + +SL R++ D Sbjct: 61 LVVELDTGEALVFQLKIGGQLLLV----PPVEEPEDSVMLVLSLDGGR-----RLLLRDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 F L+ K L LGPEP F YL + + + +K LL+Q +++G Sbjct: 112 TGFSRARLL--GEKELAERLSGLGPEPFSEEFTVRYLKERLGSRRAQIKPLLLDQSLISG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A+LSP R+ SL + +L I+ L I+ G+++R Y Sbjct: 170 IGNIYADEILYDARLSPRRRASSLSEEEW------ERLYAAIRSNLAAGIEHRGTTVRLY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G QN V+ + G PC CG + R GR T YC CQ Sbjct: 224 RDVLGRAGEHQNHLRVFERHGGPC-PRCGAEVVRERVGGRPTHYCPRCQ 271 >gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 298 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 24/301 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + +R F+ G+ + V RR Sbjct: 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60 Query: 58 KYLLIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL +EL G+ +++ HLGMSG ++ + +H V ++ ++ Sbjct: 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQMLVADHGKP----DEKHLRVRVTFDDDGP 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 ++ P+ + +P D +F ++ + LK Sbjct: 117 ELRFVDQRTFGGLSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAVAGIRRRRTGLK 176 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +V+GIGNIY EALWRA+L R T SL + G ++ +V+ +A Sbjct: 177 RALLDQTVVSGIGNIYADEALWRARLHWARPTESLTRAQG------RAVLTAAAEVMDEA 230 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G+ GYF + +VYG+T C CG IRR RS+F C C Sbjct: 231 LAQGGTSFDALYVNVNGASGYFDRSLAVYGQTDRAC-PRCGTPIRREAFMNRSSFSCPRC 289 Query: 288 Q 288 Q Sbjct: 290 Q 290 >gi|188524384|ref|ZP_03004411.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273789|ref|ZP_03206323.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|195660050|gb|EDX53430.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249544|gb|EDY74326.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] Length = 277 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N ++ YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKFYYQPKDE---WFNLAHTHIIIEFENG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L + + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDLTIKD------YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC + CG +IR+ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPCQT-CGTIIRKTKVNGRGTYYCSNCQ 274 >gi|297626606|ref|YP_003688369.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922371|emb|CBL56943.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 301 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ + + + + L+ P F + G++ + RR Sbjct: 1 MPELPEVEVVREGLAQFVEGRRIDAVRVLDARALKRHDGGPDDFVGSLVGRRCDEPRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL I L+G ++I HLGMSG F ++ P+H V I++ + T ++ + Sbjct: 61 KYLWIPLDGRDALIAHLGMSGQFRVDAPGAPL----PRHARVVITMDDGT-----QLRFV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + P +R + +P D F + + K++ +K ALL+Q +V Sbjct: 112 DQRLFGSLAYCPGGAGLPEP-IRHIALDPFDPHFRVEAVAGRLQAKHTTVKRALLDQTLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALW A + T L V A+ AGG+S Sbjct: 171 SGIGNIYADEALWLAHTNYEHPTSLLSTRRARAVLR------RAADVRRRALAAGGTSFD 224 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV++ G GYF +VYG+ G+PC CG I R RS++ C CQ+ Sbjct: 225 ALYVNVHGDSGYFARGLAVYGRDGQPC-PRCGTAIVRQRFMNRSSYLCPRCQR 276 >gi|218294712|ref|ZP_03495566.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] gi|218244620|gb|EED11144.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] Length = 264 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 148/291 (50%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ +++ + ++ H+ LR+ + + V RR K+L Sbjct: 1 MPELPEVETTRRRLLPLLEGKRLLEVR-HQDPLRYRHTERARE----RAVEGVGRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G L ++VHLGM+G F +E T H L + + ++DPR Sbjct: 56 LLALSGGLEMVVHLGMTGGFRLEKTP---------HTRAEFLLEDG------VLHFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +VE + P L LGPEP F + LK LL+Q + AG+ Sbjct: 101 RFGRIWVVERGAYGEIPLLARLGPEPLSPEFRPEAFLQGLRRSRKPLKALLLDQTLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA LSP R R + + +L Q +++VL +A+ GGS+L D Sbjct: 161 GNIYADEALFRAGLSPFRLGREVSEAEAL------RLFQALREVLAEAVALGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG G FQ +VYG+ G PC CG I + V AGR T +C +CQ+ Sbjct: 215 YQQPDGLPGGFQKRHAVYGRAGLPC-PRCGAPIAKGVVAGRGTHHCPWCQR 264 >gi|123965595|ref|YP_001010676.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9515] gi|166198729|sp|A2BUV8|FPG_PROM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123199961|gb|ABM71569.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9515] Length = 293 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH-HFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L +KN + + + R++ + + F + I RR K Sbjct: 1 MPELPEVETVRKGLEQKLKNFIIKRVEICRESTVAYPIDKQDFVKGLQNSLINKWDRRGK 60 Query: 59 YLLI------ELEGNLSIIVHLGMSGSFIIE-----HTSCAKPIKNPQHNHVTISLTNNT 107 YL+ + + L +GS ++ + + K +P + NN Sbjct: 61 YLIAKLKKADRNHTYIENEMSLKNNGSLVVHLRMTGYFTFNKNPTSPCKHTRIRLFDNNN 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 N + Y D R FG M V L + L LGPEP FN YLT K Sbjct: 121 N----ELRYIDVRSFGQMWWVREGLSPKNIIKGLGALGPEPFSEKFNISYLTKIILNKTR 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K+ LL+Q IVAGIGNIY E+L+ A +SP R+ R+ K L KL I +VL Sbjct: 177 SIKSILLDQTIVAGIGNIYADESLYSAGISPFREART------IEKHELIKLRIAIIEVL 230 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I AGG++ D+ ++G G F +VY +TG+ C C +I R +GRST +C Sbjct: 231 KKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKC-HACKNLIERQKISGRSTHWCR 289 Query: 286 YCQK 289 CQK Sbjct: 290 KCQK 293 >gi|302558161|ref|ZP_07310503.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302475779|gb|EFL38872.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 286 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D + H + +R F+ +G ++ RR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHARAVRRHLAGADDFAHRLKGHRVGVPRRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++ HLGMSG +++ + + +H V + T++ +T + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAP----DEKHLRVRVRFTDSLDT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPEGLPDVIAHIARDPLDPLFDEEAFHRALRSRRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ R T + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYERPTAGFTRPRTL------LLLGHVRDVMNAALSQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|281356218|ref|ZP_06242711.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] gi|281317587|gb|EFB01608.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] Length = 274 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E I R L + + + + +R SA G++IIDV RRA+Y+ Sbjct: 1 MPELPEAENIGRALKRALVERRIVKVEVFTPAMREPLTPLLSAGLEGRRIIDVRRRARYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++EL+ +++H GMSG +E + H HV + L + + R Sbjct: 61 VVELDDGRGLLMHFGMSGVVRVESPEVPRRK----HEHVFLHLDDGR-----AFRFECTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTL-GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RF + + E +P G EP ++FN YL + + +KN ++N +IV G Sbjct: 112 RFSVLKVCELPRPGGWPSELDALGVEPLTDAFNGNYLYEKSRGRTGCVKNFIMNNEIVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++SP+R+T S+ + ++ + +++L AI+ GG+S+ D+ Sbjct: 172 IGNIYATETLYASEVSPLRETGSVTREE------CSRIAECAKRILARAIELGGTSISDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++DGS G F +VYG+ G+ C CG+ I GRS+ +C CQK Sbjct: 226 LNVDGSEGKFALELAVYGRKGQAC-PKCGERIEMRKLGGRSSCFCPVCQK 274 >gi|17231812|ref|NP_488360.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] gi|24211709|sp|Q8YP80|FPG_ANASP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17133456|dbj|BAB76019.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] Length = 283 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 133/298 (44%), Gaps = 26/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ LHR F G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRTIAHPFSVGDFLNGITGSTISTWHRRGK 60 Query: 59 YLLIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YLL E + VHL M+G + + H V I Sbjct: 61 YLLAELSASPSTTSIPWLGVHLRMTGQLLWLNQDEPLHK----HTRVRIFFEEEQ----- 111 Query: 113 RVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V + + L L +P F YL ++ H + +K A Sbjct: 112 ELRFVDQRTFGQMWWVPPGIAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIY EAL+++ + P + + L I +VL +I+ Sbjct: 172 LLDQSVVAGLGNIYADEALFKSGVLPETLCTEVQLKQ------IKLLRTAIIQVLETSIE 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG++ +++++ G G + VY + GEPC CG +I+RI GRS+ +C CQ Sbjct: 226 AGGTTFSNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFCRQCQ 282 >gi|300087227|ref|YP_003757749.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526960|gb|ADJ25428.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 271 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 149/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + +++ +T + +H +R P FSA G+++ V RR KY Sbjct: 1 MPELPEVETVTNEIRPYVQDRVITGVVVHWPGTVRGHSPAQFSADLEGRRVTGVFRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ ++ HL M+GS I +P + V I L + RVI+ DP Sbjct: 61 IVWELDDGNRLLTHLKMTGSLIALGPDDD----DPPYVRVEIRLDDGR-----RVIFRDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV L LGPEP + F A K+ S +K ALL+Q ++AG Sbjct: 112 RKFGRMALV----GEASGVLAGLGPEPLADEFTAEVFESLLRKRKSPVKTALLDQTLMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y EAL A + P+R SL + +L I+++L AIDA G+S+ +Y Sbjct: 168 IGNMYADEALHSAGIHPLRPADSLDTDE------YRRLYLAIRRILRSAIDARGASISNY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +G+ AF V K GE C CG + RIV GR T+ C CQ+ Sbjct: 222 IRPGGDLGHAHFAFKVAHKRGENC-RGCGTPLERIVIRGRGTYLCPACQR 270 >gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus ATCC 19977] gi|238688908|sp|B1MDL2|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus] Length = 286 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 93/299 (31%), Positives = 147/299 (49%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + H + +R + G++I RR Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60 Query: 58 KYLLIELEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + LEG+ VHLGMSG +I S PQH + +L + + + Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPIS------RPQHLRIAATLDDGS-----VL 109 Query: 115 IYNDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG + V P+ + +P D F + + K++ +K AL Sbjct: 110 SFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEIKRAL 169 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+G+GNIY EALW+A++ R T + + L +++ V+ A+ Sbjct: 170 LDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRA------KLTEVLDSAAAVMRLALAQ 223 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S D YV+++G GYF + YG+ GEPC CG+ +RR RS+++C CQ+ Sbjct: 224 GGTSFDDLYVNVNGESGYFDRSLEAYGREGEPC-RRCGRAMRREAFMNRSSYFCPSCQR 281 >gi|298242821|ref|ZP_06966628.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] gi|297555875|gb|EFH89739.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] Length = 308 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 33/312 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R L + T+ + + + + P F A G+ I V RR K+ Sbjct: 1 MPELPEVEYTARQLQASIVGATIREAQVFWERIIAHPLPEDFCAQISGRTIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--------TNNTNTKK 111 LL++L G +I+H M+G+F++ + + S T+ + Sbjct: 61 LLLDLSGEGLLIIHRRMTGNFLLLEPGWTLDTSLRERDAQAWSTRGPSFTLETDGSQAYS 120 Query: 112 YR---------------VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 +++ D R+FG + L + S + + LR LGPEP +FN L Sbjct: 121 SEMNYCRVCFILEDGRNLLFTDQRKFGRVSLWQRSQEEEV--LRGLGPEPLSEAFNIEGL 178 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + S +K LL+Q ++AG+GNIY EAL+ A++ P R SL + Sbjct: 179 AQALAHRRSPIKQVLLDQTVIAGVGNIYADEALFHARIHPRRAANSLTSQE------IAS 232 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L + + VL+ AI+ GG+S Y + G G N VY + G+PC + CG +I RIV Sbjct: 233 LHEAVVSVLLKAIEHGGTSFSSYRDLWGEAGDNYNHVHVYKQAGKPC-TRCGTLIERIVV 291 Query: 277 AGRSTFYCTYCQ 288 A RST +C CQ Sbjct: 292 AQRSTHFCPVCQ 303 >gi|171920859|ref|ZP_02932023.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178962|ref|ZP_02964719.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024108|ref|ZP_02996848.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518256|ref|ZP_03003784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195867830|ref|ZP_03079830.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209554312|ref|YP_002284850.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550503|ref|ZP_03771452.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551254|ref|ZP_03772200.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903064|gb|EDT49353.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209239|gb|EDU06282.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019158|gb|EDU57198.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998107|gb|EDU67204.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660527|gb|EDX53784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209541813|gb|ACI60042.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379069|gb|EEH01434.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379657|gb|EEH02019.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 277 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N ++ YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKFYYQPKDE---WFNLAHTHIIIEFENG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L + + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDLTIKD------YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC + CG +I++ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPCQT-CGTIIQKTKVNGRGTYYCSNCQ 274 >gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 286 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 144/299 (48%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P +A +I RR Sbjct: 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60 Query: 58 KYLLIELEGNLSIIV----HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + L+G HLGMSG ++ + H ++ L + T Sbjct: 61 KYLWLVLDGPGQPDTALVVHLGMSGQMLLGE------VPRADHVRISALLDDGT-----V 109 Query: 114 VIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG LVE P+ L +P D F+ + +K+S +K Sbjct: 110 LSFADQRTFGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHSEIKRQ 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALWRAK++ R +L + L ++ +V+ DA+ Sbjct: 170 LLDQTVVSGIGNIYADEALWRAKVNGARIAATLSRRR------LGAVLDAAAEVMRDALS 223 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 QGGTSFDSLYVNVNGQSGYFDRSLDAYGREGQNC-RRCGAVMRREKFMNRSSFYCPKCQ 281 >gi|289643137|ref|ZP_06475266.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] gi|289507029|gb|EFD27999.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] Length = 284 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAA--TRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + +R A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERTLPGRTIATVAVAHPRAVRRHAAGAADFAAVLTGRTIEAACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG ++ T H V + ++ + + Sbjct: 61 KYLWLALDSGAALLGHLGMSGQLLVVATEKPDET----HLRVRFTFSDA----GRELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + +V + P+ + +P D F+ ++ + +K ALL+Q +V Sbjct: 113 DQRTFGGLAVVP-ADAGVPAPIAHIARDPLDPGFSDAGFVAAVRRRRTGIKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY E+LWRA L R T +L + L +L+Q +++VL++A+ AGG+S Sbjct: 172 SGIGNIYADESLWRAGLHYARPTGTLTRGE------LNRLLQSVREVLLEALHAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV ++G G F + +VYG+ G PC + C IRR RS+F C CQ Sbjct: 226 ALYVSVNGESGLFDRSLAVYGRAGLPC-TRCETPIRRDAFMNRSSFTCPRCQ 276 >gi|119492791|ref|ZP_01623877.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] gi|119452944|gb|EAW34116.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] Length = 301 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 142/314 (45%), Gaps = 41/314 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L V +N T+ + K L F G+ I RR K Sbjct: 1 MPELPEVETVKRGLNQVSRNQTIQGGEVLLKRTLAHPVSIDEFITGLSGQAIAGWYRRGK 60 Query: 59 YLLIELEGNLSII---------------------VHLGMSGSFIIEHTSCAKPIKNPQHN 97 YLL E + VHL M+G + H Sbjct: 61 YLLAEFSTQFNPNSDDSQNLEFSDLQTFSNGGLAVHLRMTGQLLWVSQDEPLSK----HT 116 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIY 155 V + N + + + D R FG M + +++ L+ LG EP F+ Y Sbjct: 117 RVRLFFPN-----RQELRFVDQRTFGQMWGIPPNVEVSKIVTGLQKLGHEPFSEEFSIKY 171 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 LT QF+++ +K ALL+QK+VAG+GNIY E L+ + +SP + L + Sbjct: 172 LTTQFYRRQRPIKTALLDQKLVAGVGNIYADETLFLSGISPTTRCAELTPAQ------IE 225 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L ++ +VL AIDAGG+++R+++++ G G + VY + G+PC C I R+ Sbjct: 226 TLHAQLVQVLKTAIDAGGTTVRNFLNVAGVNGNYAGQAWVYNRAGQPC-RVCQTPIERLK 284 Query: 276 QAGRSTFYCTYCQK 289 AGRS +C CQK Sbjct: 285 LAGRSAHFCPRCQK 298 >gi|149925769|ref|ZP_01914033.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] gi|149825886|gb|EDM85094.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] Length = 272 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI +R + + + + + LR+ + + + + V RR+KY+ Sbjct: 1 MPELPEVEITKRGVDLHFTGQRLLACTVRQPRLRWPVSTQVQSCVK-QILQAVERRSKYM 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ G ++VHLGMSGS I S +H+H+ + + + YNDPR Sbjct: 60 LMDFGGQ-VLVVHLGMSGSMKIVSASTP----WDKHDHIEWNFGD------KVLRYNDPR 108 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG ++ VE + + LGPEP ++F K ++K LL+ V Sbjct: 109 RFGSVEYVEKAPGWEDSFVRFAKLGPEPFSDAFTPESFFKATRGKKVSIKALLLSGFAVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY CEAL+R+ + P + L + N L + VL +AI+ GGS+LR+ Sbjct: 169 GVGNIYACEALFRSAIRPGKAAGRLSRAN------AQALHAAVVAVLTEAIERGGSTLRN 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + IDG +G+FQ VYG+ G+PC CG +++R V RSTFYC CQ Sbjct: 223 FQAIDGELGHFQLHCDVYGREGQPC-KRCGALVKRRVMNQRSTFYCAQCQ 271 >gi|313680246|ref|YP_004057985.1| DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] gi|313152961|gb|ADR36812.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] Length = 265 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 142/291 (48%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + G+++ + RR KYL Sbjct: 1 MPELPEVETVRRMLAPVVTGRRLLGLEHDDPARYAAAEAA-----VGRRVHALRRRGKYL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G L ++VHLGMSGS ++ H + V +NDPR Sbjct: 56 IFALTGGLELVVHLGMSGSLRLDE---------GTHTRARLEFE------GVTVFFNDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V P L +GPEP F A + + LK ALL+Q+ VAG+ Sbjct: 101 RFGKLRAVPAGDYRVLPTLARMGPEPLTRGFTARAFAARLARTARPLKPALLSQEPVAGL 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EALW+A+L P R +L + + +L + ++ VL A++ GGS+L D Sbjct: 161 GNIYADEALWKARLHPARPANALAPDE------VRRLHRAVRAVLRRAVERGGSTLGDGA 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ +VYG+ GE C CG+ I R+V GRST C CQ+ Sbjct: 215 YTRPDGEPGYFQIEHAVYGRAGEAC-PRCGRTIERLVLGGRSTHVCPRCQR 264 >gi|172039237|ref|YP_001805738.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] gi|226761669|sp|B1WTF7|FPG_CYAA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171700691|gb|ACB53672.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] Length = 283 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ + L + F RR K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIRGGKVLLPRTLAYPVSIEEFLEQINNATFGQWQRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ E + VHL M+G + + H + + + + + Sbjct: 61 YLLVPLEEKKGWLGVHLRMTGQLLWVKQNEPLSR----HTRLRLFCD-----RSKELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V + + L+ LG EP N+F+ Y + + N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPNQPPETIITGLQKLGLEPFSNAFSLDYFIDKLKGRQRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAGIGNIY EAL+++ + P + L Q + +L + + +VL AI+ GG++ Sbjct: 172 VVAGIGNIYADEALFKSGIRPTTLGKELSQPQ------VKRLREAMIEVLKTAIEEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G + VYG+ +PC CG I RI GRS+ +C CQ Sbjct: 226 FSDFRGVTGINGNYSGVAWVYGRHNQPC-RVCGTPIERIKLGGRSSHFCPQCQ 277 >gi|19553271|ref|NP_601273.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|161486717|ref|YP_226310.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|24211704|sp|Q8NNV7|FPG_CORGL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21324843|dbj|BAB99466.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 286 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 29/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ + + A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L + E +L ++VHLGMSG +I+ H + L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDAPISP----HLRAKVELDNGD-- 114 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 V + D R FG+ L + + + + D S + + + S +K Sbjct: 115 ---EVWFVDQRTFGYWWLGDLVD-GVPERVSHIATDVLDESADFSAIARNLKSRKSEIKR 170 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A+ Sbjct: 171 LLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKAL 224 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + + Y +TGEPC CG +I R R + YC CQ Sbjct: 225 AQGGTSFDALYVNVNGNSGYFALSLNAYAQTGEPCG-RCGTLIIRESFMNRGSHYCPNCQ 283 Query: 289 K 289 K Sbjct: 284 K 284 >gi|145593839|ref|YP_001158136.1| formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] gi|189044675|sp|A4X4F8|FPG_SALTO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145303176|gb|ABP53758.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] Length = 287 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + ++ + +R HF+ R + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTDRRIAEVQVLHPRAVRRHAAGAAHFADVLRETTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVVGHLGMSGQLLLQPAAAPDET----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + +A ++ + + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSAGGAELPTEIAHIARDPLDPEFSDATFVAALRR-RRTEIKRALLDQTLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R T +G + +L+ ++ VL +A+ GG+S Sbjct: 172 SGVGNIYADEALWRARLHGTRPT------DGLTGPAVLRLLGHVRDVLGEAVKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG+ +RR RS+F C CQ Sbjct: 226 ALYVNVNGESGYFDRALNVYGRADQPC-RRCGEPVRREAFMNRSSFSCPRCQ 276 >gi|93117325|gb|ABE99580.1| fpg [Neisseria meningitidis] Length = 255 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 141/269 (52%), Gaps = 14/269 (5%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + ++ TV + L + LR+ G++++ RRAKYL++ + +++ Sbjct: 1 GIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQT-GILLI 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E + Sbjct: 60 HLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-GI 113 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFRA 173 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 GISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQE 227 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 228 YTVYGRHNQPC-PQCGGLVVKETLGQRGT 255 >gi|224541517|ref|ZP_03682056.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] gi|224525554|gb|EEF94659.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] Length = 270 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 143/289 (49%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + T+ I + + F + + I D+ R KYL Sbjct: 1 MPELPEVETVRRTLKNFVLHKTIDSIEVRYTRIIDGDVEAFVSTLIHQSICDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + + I HL M G + I+ H+H+ +T+ T+ + YND R Sbjct: 61 IF-ILDHDAFISHLRMEGKYNIKQKDEPYDK----HDHIIFHMTDGTD-----LRYNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+ +YPPL LG EP D SF+ Y+ + H+ + +K LL+Q I GI Sbjct: 111 KFGRMQLVDKEHYREYPPLNRLGQEPMDASFD--YIYPRIHQSHLPIKQLLLDQSIFTGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E +R + P + L + + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFRMGMDPRTRGDRLSKKR------ILELIEVSSTILKEAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ SV+ + S C I++I AGR T+YC CQK Sbjct: 222 DANGIHGLFQVTLSVHA---QKTCSKCKGPIKKITIAGRGTYYCPNCQK 267 >gi|227498716|ref|ZP_03928858.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] gi|226904170|gb|EEH90088.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] Length = 274 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + D+ + + P F R + V RR KY Sbjct: 2 MPELPEVEQVRISLEPYVLEQKIEDVRILLPRMIVHPSPEGFRKGLRDAVVTAVLRRGKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L+G ++VHL M+G+F+ + P ++ Y + D Sbjct: 62 LSLMLKGGERLMVHLRMTGAFLAVKKGESLPPFARWGLILSG---------AYDLWMTDI 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG L + LGPEP D++ YL + K + +K +L+Q I+AG Sbjct: 113 RTFGTAALYQEGEPLD-KGFEALGPEPLDDAMTGTYLKERARHKKTQVKPFILDQSIIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P ++ + + +L I++V+ A+ G++ R+Y Sbjct: 172 LGNIYADESLFAAGIRPTKRVSRMTKKEW------ERLAIAIKEVIQSALRHHGTTFRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +G VY + G+PC CG+ + + AGR T YC +CQK Sbjct: 226 QDADGKMGDNFRYLKVYHRGGKPC-PLCGKTLTKTKVAGRGTVYCAHCQK 274 >gi|148976962|ref|ZP_01813617.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] gi|145963836|gb|EDK29096.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] Length = 258 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 138/276 (50%), Gaps = 20/276 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + T+ + LR+D P G+ I +SRRAKYLLIE + + IV Sbjct: 2 GISPHLVGETIKTLTFRTPKLRWDIPQELKK-LEGQVIRAISRRAKYLLIETDT-GTAIV 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS + +H+HV + LTN + YNDPRRFG Sbjct: 60 HLGMSGSLRVLDADFP----AAKHDHVDLKLTNGK-----VLRYNDPRRFGAWLWSAPDE 110 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + L GPEP + FNA Y+ + K+ +K +++ K+V G+GNIY EAL+ A Sbjct: 111 VHSV--LLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 ++ P+R + + L EI++VL AI GG++L+D+ DG GYF Sbjct: 169 RIHPLRSANKVTKAEWI------LLTDEIKQVLATAIKQGGTTLKDFSQADGKPGYFAQE 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VYGK GE C +C +I+ + R+TFYC CQ Sbjct: 223 LQVYGKAGEKC-PSCEALIQELKIGQRNTFYCEECQ 257 >gi|148241549|ref|YP_001226706.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] gi|147849859|emb|CAK27353.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] Length = 282 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 145/294 (49%), Gaps = 17/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR---FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + + + + R P F+AA RG ++ RR Sbjct: 1 MPELPEVETVRRGLELQVGRFPIGETIVCRSRAVAAPKGDPDGFTAALRGCELAGWRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL+ +LE + + LG+ + + + P + L+ K+ + + Sbjct: 61 KYLVAKLERDGAPAGELGVHLRMTGQFQWLQREERPPCPHTRVRFLSE-----KHELRFV 115 Query: 118 DPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V T + L LGPEP ++FNA YL + + +KNALL+Q Sbjct: 116 DVRSFGELWFVPLGTPTEQVITGLTRLGPEPFSDAFNANYLRQRLKGSSRPIKNALLDQA 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P + S+ L KL + KVL +I AGG++ Sbjct: 176 LVAGVGNIYADESLFMAGIRPHTPSGSVSAAR------LEKLRAALVKVLELSIGAGGTT 229 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ + G+ G + VY + GEPC CG ++RR GRS+ +C CQ+ Sbjct: 230 FSDFRDLTGTNGNYGGQARVYRRGGEPC-RQCGTILRRDTLGGRSSHWCPSCQR 282 >gi|317151855|ref|YP_004119903.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] gi|316942106|gb|ADU61157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] Length = 272 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L V+ + + + +A G ++ VSRRAK L Sbjct: 1 MPELPEVEVIARGLHAVLVGRVIAAVEPVDPTRLSEDGAALAAKVVGAGVVRVSRRAKVL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ HL M+G + +H+ L + + + + D R Sbjct: 61 LIGLGNGATLAFHLKMTGRVV-----HGPMRPVERHDRTRFILDDGS-----LLCFADMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + L +GPEP D A L + ++ +K LL+Q +VAG+ Sbjct: 111 RFGYVRAFAPGGLETWDFLCRVGPEPLDTPPAA--LAGRVLSRSGRIKALLLDQAVVAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA + P + L + +L +Q VL AI GSS+RDYV Sbjct: 169 GNIYADESLHRAGIHPQTRGNRLGRAG------AERLFAHLQDVLRQAIAENGSSIRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN+F+VYG+ G PC CG ++ + AGR++ +C CQ Sbjct: 223 NASGDAGAFQNSFAVYGRKGSPCA-VCGAILFAVKVAGRTSTFCPRCQ 269 >gi|282891369|ref|ZP_06299871.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498866|gb|EFB41183.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 275 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 138/294 (46%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R + ++ T+ + + + P FS G+KI+++SRR K Sbjct: 1 MPELPEVETITREMREAKLEGRTIEKAQIFWERTIATPSPSIFSKKIVGQKILNISRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++++ L +++HL M+G F+I + IK H V + L + + Y D Sbjct: 61 FIILTLSKES-LLIHLRMTGKFLI----AKEQIKPDSHERVRLFLDDGRI-----LRYED 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV+ + G EP +F + +K LL+Q +A Sbjct: 111 QRKFGKWYLVKNPDEVLGAL----GIEPLSENFTLSTFQKILTGHHRQIKPFLLDQHYIA 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-- 236 G+GNIYV EALW +K+ P+R +L + + L + I VL I G+SL Sbjct: 167 GLGNIYVDEALWVSKIHPLRSVSTLTKKE------IKALHEAIPIVLQTGIKNIGTSLGA 220 Query: 237 --RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +Y + G G QNA +V+ K G PC C I+++ R T YC CQ Sbjct: 221 ARANYFSVSGRRGSNQNALNVFRKDGLPC-PRCNTTIKKMTVGQRGTHYCPVCQ 273 >gi|254995076|ref|ZP_05277266.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Mississippi] gi|255003241|ref|ZP_05278205.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Puerto Rico] gi|255004368|ref|ZP_05279169.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Virginia] Length = 267 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 1 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +H+HV + L + V++NDPR Sbjct: 61 VFVLSRGERVMFHLGMSGRMAHVRPYVRE-----KHDHVALLLDGG-----FHVVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV P + + +K+ L+N IVAGI Sbjct: 111 RFGAVLLVNFQAYENIASRIGPDPLS-----AEFNAEYLMRPSKACVKSVLMNNAIVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 166 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC + CG I + GRSTF+C CQ+ Sbjct: 220 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALCQR 267 >gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] Length = 281 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + + + + + F+A G+ I V RRAK Sbjct: 1 MPELPEVETIARALAPGLVGRVIVGVDVPDAKVLAGPKRRADFAAMAVGRTIQSVGRRAK 60 Query: 59 YLLIELEGNLSI--------IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 LL+ L + HL M+G F I +P + + L++ Sbjct: 61 LLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIAPPGAP----DPDRARLLVRLSDGNT-- 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 +++ D RRFG ++ + +LGPEP D +K++ +K A Sbjct: 115 ---LVFADLRRFGTARVLTPEALSAWDFHASLGPEPWD--MTPQAFEEALGRKSTRIKAA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY E+L+ A++ P + L +L++ +Q V+ AI Sbjct: 170 LLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQR------QRLLKAVQNVIAAAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGS++RDY DG G FQN F VYGK+G+PC C + AGR++ YC CQK Sbjct: 224 AGGSTIRDYRTPDGVEGGFQNHFQVYGKSGDPC-PACAAPLTHAKIAGRTSTYCRKCQK 281 >gi|299139806|ref|ZP_07032978.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] gi|298598160|gb|EFI54326.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] Length = 295 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 92/318 (28%), Positives = 138/318 (43%), Gaps = 52/318 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + ++ + + K F P G KI V R K Sbjct: 1 MPELPEVETVANGVDARVRGQRIVSVWTSGKPQTFKSPETEIVETLTGTKIEKVRRVGKT 60 Query: 60 LLIE----------------------------LEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 ++++ + +VHLGM+G ++ Sbjct: 61 IVMDLVRGGAAGKQIPSGNDNKKSKDKDKDAGTKDTAQFLVHLGMTGRLLVSQAEVPL-- 118 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 P H H ++L + V + DPRRFG + +V T Y P + Sbjct: 119 --PPHTHAVLALADGR-----EVRFVDPRRFGRLSVVTTEEGYTGPG-------VEPTTV 164 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + F + +K ALLNQ I+ G+GNIY E+L+RA + P ++ L + Sbjct: 165 SEEEFAGLFKGRKLAIKAALLNQSILHGVGNIYADESLFRAGIRPRKQAGKLTRAE---- 220 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 L +L + +Q+VL AI GGSS+ DYV DG G+FQ VY + GE C +CG + Sbjct: 221 --LGRLHEALQQVLAHAIKLGGSSVSDYVDADGVRGFFQLEHKVYSRAGEDC-KDCGAGL 277 Query: 272 RRIVQAGRSTFYCTYCQK 289 ++IV GR+T YC CQ+ Sbjct: 278 KKIVVGGRTTVYCPTCQR 295 >gi|56416891|ref|YP_153965.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] gi|56388123|gb|AAV86710.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] Length = 269 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 3 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +H+HV + L + V++NDPR Sbjct: 63 VFVLSRGERVMFHLGMSGRMAHVRPYVRE-----KHDHVALLLDGG-----FHVVFNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV P + + +K+ L+N IVAGI Sbjct: 113 RFGAVLLVNFQAYENIASRIGPDPLS-----AEFNAEYLMRPSKACVKSVLMNNAIVAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 168 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC + CG I + GRSTF+C CQ+ Sbjct: 222 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALCQR 269 >gi|323141559|ref|ZP_08076444.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] gi|322413971|gb|EFY04805.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] Length = 270 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 18/287 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PEVE +R+ L ++ + + ++ + L ++ P F GK I V RR KYL++ Sbjct: 1 MPEVEQVRKTLAPHIEGKKILAVEIYLERLIKYPQPDAFIKGLVGKTISSVGRRGKYLVL 60 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 +IVHL M+G+ + + ++ P + + + + D R F Sbjct: 61 HTAPKQQLIVHLRMTGALLAQPSAAPAPAYAKIKFTL---------SDDVTMWFTDIRTF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G + LV + Y TLGPEP F A YL K +K+ +L+Q+I+AG+GN Sbjct: 112 GTLYLVTDNDTY-IEGYETLGPEPLSEGFTAGYLLPLAQKSKKAIKSFILDQQIIAGLGN 170 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY E L + + P+RK SL + +L + + V+ I G++ RDY Sbjct: 171 IYADECLALSGILPMRKACSLSAAE------VGRLCEAVNAVIAQGIKNRGTTFRDYKDG 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G+ G QN VYG+ G+PC CG +++ GR T YC +CQK Sbjct: 225 EGNKGDNQNHLLVYGRGGKPC-KKCGALLQTTKVGGRGTVYCEHCQK 270 >gi|71064918|ref|YP_263645.1| formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] gi|90101313|sp|Q4FUU7|FPG_PSYA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71037903|gb|AAZ18211.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] Length = 309 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 86/318 (27%), Positives = 137/318 (43%), Gaps = 44/318 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + A + V RRAKYL Sbjct: 1 MPELPEVETTKTSLAPLL-GQKVTNVQVFQPKLRWSIPDNL-ADLVDYTLDSVERRAKYL 58 Query: 61 ----------------LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 ++VHLGMSGS + + K H+H+ +S Sbjct: 59 ILNFIPLADDGISSTVQPRNLQPRQLLVHLGMSGSLQQHNHASDKRK----HDHLIMSFI 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVET--------------SLKYQYPPLRTLGPEPADNS 150 ++ + ++ Y DPRRFG + +E S + L L + Sbjct: 115 -GADSTQTQLHYYDPRRFGSILWLEEYGDKLLNHLGPEPLSDAFTADYLYHLIQRSRQSI 173 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + + +K+ ++ Q+ V G+GNIY E+L+ + + P + Sbjct: 174 QTQNSKSIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPANEVSYAQIVI 233 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ G C +C Sbjct: 234 ------LVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGNAC-PHCEST 286 Query: 271 IRRIVQAGRSTFYCTYCQ 288 + I GR++ YC CQ Sbjct: 287 LENIKLNGRASVYCPLCQ 304 >gi|50365398|ref|YP_053823.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] gi|50363954|gb|AAT75939.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] Length = 275 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N T+ + + + + F + +KI+ VS KY Sbjct: 1 MPELPEVRTVAVFLNKRIVNTTILKAECFFEKMIWRNEVKDFYKSVLNQKILKVSNYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ EL II HL M G + I N H + L+N + Y D Sbjct: 61 LMFELSNQ-IIISHLRMEGKWSISKKEIDIY--NANHLRLQFELSNGE-----YLKYYDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG +++ + Q + LGPEP ++ + YL + K NS +K +L+Q ++ G Sbjct: 113 RKFGTIEIWDKKNYKQKSGMDKLGPEPLNSQPSFEYLKEKAIKSNSLIKAFILDQSVLCG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A ++P R T++L L K+I +L AI G+S+ Y Sbjct: 173 IGNIYANEILFAAGINPERITKTLTDEE------LKKIIMFSNAILEKAISLKGTSIHSY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ+ V+ + E C CG I + AGR T++C CQ Sbjct: 227 KSGDGETGQFQHELKVHLRKDEKCF-VCGTKILKKQVAGRGTYFCAKCQ 274 >gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 286 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + +R F+ +G +I SRR Sbjct: 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE I+ HLGMSG +++ + + +H + + T+ +T + + Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPHTAP----DEKHLRIRVRFTDALDT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ +K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRPRTLS------LLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRPWMNRSSYYCPKCQR 280 >gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] Length = 286 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPH--HFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + T+ ++ + +R F+A +G + RR KYL Sbjct: 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60 Query: 61 LIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + S++ HLGMSG +++ A + +H + IS ++ T + + D Sbjct: 61 WLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGT---ELRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L + + + + +P D +F+ K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T SL + +L+ I+ V+ A+ AGG+S Sbjct: 174 VGNIYADEALWRARLHYERPTASLTRPRS------AELLGHIRDVMNAALAAGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 277 >gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|256784972|ref|ZP_05523403.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289768865|ref|ZP_06528243.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|7531122|sp|Q9ZBQ6|FPG_STRCO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|4007732|emb|CAA22416.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|289699064|gb|EFD66493.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 286 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ + +R P F+ + +I SRR Sbjct: 1 MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG 60 Query: 58 KYLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + HLGMSG +++ +H + + + T + + Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQPHETP----AEKHLRIRVRFADALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +TS + + +P D F+ H +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTSADGLPDVIAHIARDPLDPLFDDEAFHHALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGMPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|297202625|ref|ZP_06920022.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713200|gb|EDY57234.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 286 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + +R F+ G ++ SRR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGAEDFAHRLEGHRVGTPSRRG 60 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++ HLGMSG +++ + + +H + + + +T + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAP----DEKHLRIRVRFADEVDT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ +K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFHQALRRKRSTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR+++ R T + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRIHYERPTAGFTRPRT------AELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-KRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|16330976|ref|NP_441704.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] gi|2494596|sp|P74290|FPG_SYNY3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1653470|dbj|BAA18384.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] Length = 287 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 136/298 (45%), Gaps = 26/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ + ++L + F G +++ RR K Sbjct: 1 MPELPEVETVCRGLNRLTLEQTIGGGEVLLDRSLAYPVSVEDFQKQITGCRLVGWQRRGK 60 Query: 59 YLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YLL EL N + HL M+G + + + P+H V + + Sbjct: 61 YLLGELRSNQAPGPAGWLGCHLRMTGQLLW----TERDQQRPRHTRVVLHFEGG-----W 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + L+ + L LGPEP F A YL + LKNA Sbjct: 112 ELRFVDTRTFGKVWLLPGDRPWAEVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRPLKNA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++VAG+GNIY E L+ P + + + + Q+IQ L AI+ Sbjct: 172 LLDQRLVAGLGNIYADEVLFFCGFHPTMASNQVSLQD------CELIHQQIQATLTAAIE 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG+S DY + G G + VYG+ GEPC +CG +I +I GRS +C CQ Sbjct: 226 AGGTSFSDYRQVTGINGNYGGMAQVYGREGEPC-RHCGTVIAKIKLGGRSAHFCPQCQ 282 >gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|166215639|sp|A0PQ49|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans Agy99] Length = 292 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 23/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP----IKNPQHNHVTISLTNNTNTKKYR 113 KYL + L+ + ++ + + +H ++ L + T Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGT-----V 115 Query: 114 VIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG L + P+ L +P D F+ + K+S +K Sbjct: 116 LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEVKRR 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V+ +A+ Sbjct: 176 LLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADVMREALA 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 230 KGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFYCPRCQ 287 >gi|158312992|ref|YP_001505500.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] gi|229541073|sp|A8L594|FPG_FRASN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158108397|gb|ABW10594.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] Length = 291 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ +H + +R HF+A+ G+ + RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60 Query: 58 KYLLIELEGNLSII--------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 KYL + L + HLGMSG ++ + H V T+ Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSGQLLVVPADSPDQV----HLRVRFRFTDE--- 113 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D R FG + +V + P + + P+P F+ ++ + LK Sbjct: 114 -GRELRFVDQRTFGGLAVVSGGAELPAP-IAHIAPDPLSVDFDPERFADALRRRRTGLKR 171 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +++G+GNIY E LW A+L R T ++ + +L+ ++ V+ A+ Sbjct: 172 ALLDQTLISGVGNIYADEGLWAARLHYARPTETVTRAEAL------RLLDAVRTVMTAAL 225 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG+S YV +G G F+ + VYG+ G+ C S C IRR RS+F C CQ Sbjct: 226 AAGGTSFDRLYVSTEGVSGLFERSLEVYGRGGQAC-SRCASTIRRDAFMNRSSFSCPACQ 284 >gi|29829206|ref|NP_823840.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|39931257|sp|Q82JU0|FPG_STRAW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29606312|dbj|BAC70375.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D+ + +R F+ +G+++ SRR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHTAGGEDFAHRLKGRRVGVPSRRG 60 Query: 58 KYLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + + HLGMSG +++ CA H + + + T + + Sbjct: 61 KYLWLPLETTDTAVLAHLGMSGQLLVQPHDCADER----HLRIRVRFADALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDAAFHEALRRKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ R T + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYERPTAGFTRPRT------AELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|262277744|ref|ZP_06055537.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] gi|262224847|gb|EEY75306.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] Length = 286 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 160/291 (54%), Gaps = 9/291 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI + +L + + V ++ + LR+ + + K I + RR+KYL Sbjct: 1 MPELPEVEITKISLSKQILHKKVKNVTILNPRLRYKLNKQNLLSLKNKIIKKIIRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT--KKYRVIYND 118 LI ++VHLGM+G F K + + I ++ K + +IYND Sbjct: 61 LIHFNDKNILLVHLGMTGRFYFVKKGKNKIDTSFYTKNEIIKKHDHLKLSFKGFDLIYND 120 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FGF+ + ++ L +LGPEP +F+ YL ++ NS++KN L+NQ +V+ Sbjct: 121 IRKFGFIKKILSTNIESTKHLSSLGPEPLSLNFSFKYLKNKIRNSNSSVKNLLMNQSVVS 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+ +SP + + L K+I I+KVL AI AGGS++++ Sbjct: 181 GLGNIYVNEALFRSCVSPQKPGKFLKDIET------RKIIIAIKKVLKMAIKAGGSTIQN 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 Y + +G G +Q F VY + GE C C IRR++ +GRS+F+C CQ Sbjct: 235 YHNSEGKTGSYQANFKVYDREGETCKRAGCTGKIRRVIASGRSSFFCIKCQ 285 >gi|47459207|ref|YP_016069.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] gi|81697049|sp|Q6KHS0|FPG_MYCMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|47458536|gb|AAT27858.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] Length = 274 Score = 172 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + +L ++ + T++ I + + + F + I ++ K+ Sbjct: 1 MPELPEVKTVILHLKKLILDKTISKIEIFIPKMIKEISSEEFKKYLENETIFNIENEGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + +K + H+ + T+ ++ + Y+D Sbjct: 61 IVFFLSNNKIMLSHLRMEGGYNF----YSKKRQKEIHDRLIFHFTDGSS-----LHYHDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + PL + P P + +K + +K LL+Q+I+AG Sbjct: 112 RMFGTFHFRNSENYLKIKPLSLVAPVPWK--IDLDEFFKLLKRKKTAIKKILLDQQIIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K+ P K L + +++ ++L ++ GGSS+R Y Sbjct: 170 LGNIYVDETLFASKVHPEFKANQLSLEQ------VKLILKNATRILQESTKLGGSSIRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K +PC NCG++I++I GR T++C CQ+ Sbjct: 224 TSLNEKEGSFQNFLQVHTKFNKPC-PNCGELIQKIKLGGRGTYFCKKCQQ 272 >gi|51244765|ref|YP_064649.1| formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] gi|81692916|sp|Q6APT2|FPG_DESPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50875802|emb|CAG35642.1| probable formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] Length = 277 Score = 172 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 148/292 (50%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAA-TRGKKIIDVSRRAKY 59 MPELPEVEII R + ++ T+ + K LR P GK+I + RR KY Sbjct: 1 MPELPEVEIILRGISPLICGRTIVAVGGSGKQLRLPLPLPELNRDASGKEITRLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + I L +++HLGM+G + A+ +H+H L NN YND Sbjct: 61 ISIFLNDGGILVLHLGMTGQLGVFPKEQAR----AKHDHFWCRLDNNQ-----EFRYNDT 111 Query: 120 RRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + + Q + LGPEP +F A YL K+ +KN +++ IV Sbjct: 112 RRFGSIRFLPAGKSRMLQESLYQKLGPEPLGETFTADYLRRAAEGKSLAIKNFIMDSHIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E+L++A + P R +S+ Q KL + IQ++L+ AID GGS++ Sbjct: 172 VGIGNIYANESLFKAAIHPARSVQSIEQEEW------EKLARCIQQILLHAIDCGGSTIS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ G GYFQ F VYGK PC +C I GR++F+C CQ+ Sbjct: 226 DFVNAKGGQGYFQMNFKVYGKKSLPC-PHCQGPISSEKIGGRASFFCPSCQR 276 >gi|227504756|ref|ZP_03934805.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] gi|227198606|gb|EEI78654.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] Length = 273 Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + G++I V+RR K++ Sbjct: 1 MPELPEVESVRRGLEGYLPGRTFERVEVLHPRANRGQEGPLDQLLVGREIGGVARRGKFM 60 Query: 61 LI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 I G + VHLGMSG + T+ H + SL+ N Sbjct: 61 WIEFADENLHDPGRDVLFVHLGMSGQMRVGETNSK-------HVRIRASLSGGVN----- 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ L + P+P + F+ + + K + +K ALL+ Sbjct: 109 LSFIDQRTFGYWLLAPWLKIA------HIAPDPLEPDFDIVAAARRIRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++ P +K +L Q + V+ A+ GG Sbjct: 163 QTVVSGIGNIYADEALWAAQVQPQKKASTLRQRDAIALID------AAASVMRAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF+ + YG+TG PC CG + R+V GRST +C CQ Sbjct: 217 TSFDALYVNVNGESGYFERSLHAYGRTGAPCD-RCGTELVRVVVGGRSTHFCPRCQ 271 >gi|329936741|ref|ZP_08286448.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329303971|gb|EGG47854.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 293 Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 19/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + +R +F+ G ++ +RR Sbjct: 1 MPELPEVEVVRRGLTRWVAHRTVAAVEVLHPRAVRRHLAGGENFAQRLTGHRLGAPARRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + + +++ HLGMSG +++ H + + + T + + Sbjct: 61 KYLWLPLEDTDEAVLAHLGMSGQLLVQPHEAPTEK----HLRIRVRFEDALGT---ELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDEEAFHRALRRKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ PC CG +RR RS+++C CQ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDLPC-RRCGTPMRRRPWMNRSSYFCPKCQ 279 >gi|258404392|ref|YP_003197134.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] gi|257796619|gb|ACV67556.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] Length = 274 Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + + + L R + G+ I V RRAK L Sbjct: 1 MPELPEVETIARGLDAALTGQHIASVHLRRDAVACGDAQRIREDVPGRCIKRVWRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++ HL MSG ++ + H L + + ++ D R Sbjct: 61 LVDCVPDRHLVFHLKMSGKLLLGGPLAGQEK----HVQAWFGLQSGES-----FVFQDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG++ L + + ++P +LGPEP D + + +K+ LL+Q ++AGI Sbjct: 112 KFGYIRLFDGAELAKWPFFASLGPEPFDLDGPG--FARILSGRRARIKSLLLDQTVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P L L +L+ + L +GGSSLRDYV Sbjct: 170 GNIYADEALFRAGIHPATPADRLSPG------ALNRLVYALHAALNKGFASGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G QN F VYG+ G C CG+ + R AGR++ +C CQ Sbjct: 224 DALGKRGSHQNEFQVYGRCGASC-PCCGRCLERTTVAGRTSTFCPRCQ 270 >gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] gi|238689243|sp|B2HJJ6|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] Length = 292 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 23/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP----IKNPQHNHVTISLTNNTNTKKYR 113 KYL + L+ + ++ + + +H ++ L + T Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGT-----V 115 Query: 114 VIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG L + P+ L +P D F+ + K+S +K Sbjct: 116 LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKHSEIKRQ 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V+ +A+ Sbjct: 176 LLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADVMREALA 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 230 KGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFYCPRCQ 287 >gi|15610061|ref|NP_217440.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15842470|ref|NP_337507.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31794101|ref|NP_856594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638806|ref|YP_979030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662769|ref|YP_001284292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148824114|ref|YP_001288868.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969553|ref|ZP_02551830.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404900|ref|ZP_03417081.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412767|ref|ZP_03421479.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215428369|ref|ZP_03426288.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431872|ref|ZP_03429791.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215447188|ref|ZP_03433940.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754677|ref|ZP_03533473.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558948|ref|ZP_03538024.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|224991298|ref|YP_002645987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254233015|ref|ZP_04926342.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|254551998|ref|ZP_05142445.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187944|ref|ZP_05765418.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260202060|ref|ZP_05769551.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260206244|ref|ZP_05773735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289444480|ref|ZP_06434224.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448590|ref|ZP_06438334.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289571112|ref|ZP_06451339.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289575630|ref|ZP_06455857.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289746724|ref|ZP_06506102.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289751593|ref|ZP_06510971.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289755038|ref|ZP_06514416.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289759047|ref|ZP_06518425.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289763101|ref|ZP_06522479.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|298526394|ref|ZP_07013803.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|306781123|ref|ZP_07419460.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|306785761|ref|ZP_07424083.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|306789801|ref|ZP_07428123.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|306794614|ref|ZP_07432916.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|306798858|ref|ZP_07437160.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|306804703|ref|ZP_07441371.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|306808896|ref|ZP_07445564.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|306968995|ref|ZP_07481656.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|307085636|ref|ZP_07494749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|54037118|sp|P64151|FPG_MYCBO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040772|sp|P64150|FPG_MYCTU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215634|sp|A1KMR9|FPG_MYCBP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215638|sp|A5U6T0|FPG_MYCTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789445|sp|C1AG40|FPG_MYCBT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3261604|emb|CAA98987.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|13882775|gb|AAK47321.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619696|emb|CAD96636.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121494454|emb|CAL72935.1| Probable formamidopyrimidine-dna glycosylase fpg [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124602074|gb|EAY61084.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|148506921|gb|ABQ74730.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium tuberculosis H37Ra] gi|148722641|gb|ABR07266.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis F11] gi|224774413|dbj|BAH27219.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289417399|gb|EFD14639.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421548|gb|EFD18749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289540061|gb|EFD44639.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289544866|gb|EFD48514.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289687252|gb|EFD54740.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289692180|gb|EFD59609.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289695625|gb|EFD63054.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289710607|gb|EFD74623.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|289714611|gb|EFD78623.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298496188|gb|EFI31482.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|308326063|gb|EFP14914.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|308329541|gb|EFP18392.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|308333734|gb|EFP22585.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|308337091|gb|EFP25942.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|308340903|gb|EFP29754.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|308344740|gb|EFP33591.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|308348720|gb|EFP37571.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|308353416|gb|EFP42267.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|308364863|gb|EFP53714.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|323718536|gb|EGB27707.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CDC1551A] gi|326904539|gb|EGE51472.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis W-148] Length = 289 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 149/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H +R P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + + +++VHLGMSG ++ CA H ++ L + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA------HVRISALLDDGT--- 111 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 112 --VLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|257055002|ref|YP_003132834.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256584874|gb|ACU96007.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 287 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 138/295 (46%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + V+ + + +R F G KI V RR Sbjct: 1 MPELPEVEVVRAGLEKHVLGRIVSSVEVLHPRAIRRHVLGEADFVGRLVGAKITAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL EL +++ HLGMSG +I+ + + + +H V +++ + + Sbjct: 61 KYLWFELADGTAVLAHLGMSGQMLIQ----PRGVVDEKHLRVRFRFSDD----GPELRFV 112 Query: 118 DPRRFGF---MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLVE + + +P D F+ + + + +K ALL+Q Sbjct: 113 DQRTFGGLSLTDLVEVEGTVLPSAIAHIARDPLDPLFDVVATARALRTRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR L R L ++ +++++A+ GG+ Sbjct: 173 TLVSGIGNIYADEALWRVGLHWARPADRLTATQARG------VLAAAAEMMVEALRVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG +I R RS+F C CQ Sbjct: 227 SFDALYVNVNGESGYFSRSLDAYGREGEPC-RRCGSLIVREAFTNRSSFSCPRCQ 280 >gi|224476780|ref|YP_002634386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421387|emb|CAL28201.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 290 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 140/304 (46%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-----------FSAATRGKK 49 MPELPEVE ++R + ++ N + ++ + F + G K Sbjct: 1 MPELPEVEHVKRGIEPLVLNQRIEEVEFSNAVINGKEIGKDTIIKQIDLPMFKLYSEGYK 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+L +E N V HLGMSG F + T + N +H HV L+N Sbjct: 61 ITRVERRSKYILFHIETNDDQRVLVSHLGMSGGFFVVDTLDDIIVPNYKKHWHVNFKLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++IY+D RRFG + V + P + + + Sbjct: 121 GK-----QLIYSDIRRFGEIKNVADLSAHSSFSDMAPEPFDENAFAHFKHQLETKTYHKK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+ AK++P R SL + ++ E+ KVL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFNAKINPERSADSLNDDEQ------KRVFDEVVKVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 I+ GG+S+ Y H DG G QN VY K + C CG I+ V AGR+T YC Sbjct: 230 RLGIENGGTSISSYRHADGKTGQMQNYLQVYKK--KVC-PVCGGPIQTKVIAGRNTHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 QCQK 290 >gi|93005206|ref|YP_579643.1| formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] gi|92392884|gb|ABE74159.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] Length = 307 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 44/318 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + S + V RRAKYL Sbjct: 1 MPELPEVETTKTSLTPLL-GQKVTNVQVFQPKLRWSMPDNLSD-LIDYTLDSVERRAKYL 58 Query: 61 ----------------LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 +++HLGMSGS H + K H+H+ +S Sbjct: 59 ILNFIPLADDGISSSVEPRNLQPKQLLIHLGMSGSLQQHHHTSDKRK----HDHLIMSFI 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVET--------------SLKYQYPPLRTLGPEPADNS 150 + + ++ Y DPRRFG + +E S + L L + Sbjct: 115 -GADDTQTQLHYYDPRRFGSILWLEDYGDKLLNHLGPEPLSDDFTADYLYYLIQRSEQSI 173 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + +K+ ++ Q+ V G+GNIY E+L+ + + P + + Sbjct: 174 QTQSSKVIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPANKISYDQIVI 233 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ GE C +C + Sbjct: 234 ------LVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGETC-PHCDSV 286 Query: 271 IRRIVQAGRSTFYCTYCQ 288 + I GR++ YC CQ Sbjct: 287 LENIKLNGRASVYCPVCQ 304 >gi|241764080|ref|ZP_04762118.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] gi|241366611|gb|EER61092.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] Length = 271 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+L V+ + + L + LR+ + G+ ++ + RR KYL Sbjct: 1 MPELPEVEVTRRSLAEVITGARIEAVRLGKP-LRWPLGCA-PSILVGQHMVALRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ LGMSGS H+HV + T K + +DPR Sbjct: 59 LIDLDKGLLLLH-LGMSGSLRFIRDQAP----PGVHDHVDLV------TSKGVLRLHDPR 107 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP +F L + +K LL ++V G Sbjct: 108 RFGALVYAANEDDAVAQKLLGGLGMEPLSETFTEAALLAGLKASRAPVKQVLLAGRLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + N +L I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPT------VAGNLIGPIRARRLHAAIKTVLARAVELGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ+ +VYG+ G PC CG+ ++ I Q RS+++C CQ+ Sbjct: 222 SNADGMAGHFQHEANVYGRAGAPC-HRCGRAVQMIRQGQRSSYFCPGCQR 270 >gi|72161056|ref|YP_288713.1| formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] gi|90101321|sp|Q47S77|FPG_THEFY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71914788|gb|AAZ54690.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] Length = 296 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + ++ + +R P F+A G + + RR Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY---RV 114 KYL + L+ +++ HLGMSG +++ + +H V + LT + Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQ----PRHAAAERHLRVRLPLTARQGHDPEAPQEL 116 Query: 115 IYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG + + + + +P D +F+ +K + LK A Sbjct: 117 RFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTELKRA 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++GIGNIY EALW ++L T + + L+ +++V++ A+ Sbjct: 177 LLDQSLISGIGNIYADEALWMSQLHWATPT------EALSRSQVATLLAAVREVMVAALA 230 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + + YG+ +PC CG I+R RS++ C CQ Sbjct: 231 QGGTSFDSLYVNVNGESGYFARSLNAYGRNDQPCA-RCGTPIQRETFMNRSSYSCPRCQ 288 >gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289553286|ref|ZP_06442496.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] gi|297635544|ref|ZP_06953324.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732543|ref|ZP_06961661.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659875|ref|ZP_07816755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319490|gb|ACT24093.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289437918|gb|EFD20411.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] Length = 289 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 149/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H +R P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + + +++VHLGMSG ++ CA H ++ L + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA------HVRISALLDDGT--- 111 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 112 --VLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|115252785|emb|CAK98221.1| probable formamidopyrimidine-dna glycosylase protein [Spiroplasma citri] Length = 277 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + T+TD + K +++ F +KI + R K Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL + + +I HL M G + QH V L ++++ Y+D Sbjct: 61 HLLF-ILDDYVLISHLRMEGKYYFTSKDEP---GEWQHIMVLFELD-----HQFQLRYHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + Q PL LG EP D YL + + K+ +K LL Q ++ Sbjct: 112 TRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQNVIV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ +K+ P T++L+ + +I+ + VL AID GG+++ Sbjct: 172 GIGNIYANEILFASKIHPGEITKNLVDQD------YQNIIENTKLVLQKAIDEGGTTIAT 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G F V+G+ CL NC Q+I +I GR T++C YCQK Sbjct: 226 YHPEPGMDGKFLQQLKVHGRNKMECL-NCHQLIDKIFINGRGTYFCNYCQK 275 >gi|284931593|gb|ADC31531.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. F] Length = 274 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ P F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATPKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I + H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKISQFKAKYDER---HVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L+ L +P ++ YL + K + +K+ LL+Q +VAG Sbjct: 112 RRFGTFHIHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P +K L ++ + KVL+ AI+ G+++ Y Sbjct: 172 IGNIYADEILFLSKINPAKKANELTDQQF------KEISKNATKVLLKAIELNGTTIFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 226 QFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|262200032|ref|YP_003271241.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] gi|262083379|gb|ACY19348.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] Length = 282 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 144/294 (48%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATR-GKKIIDVSRRA 57 MPELPEVE +RR L V+ V + LR P G+ + D+ R Sbjct: 1 MPELPEVETVRRTLAPVL-GQRVEAMWTSGLPLRLNRPVPEELLREISLGRTVEDIRRWG 59 Query: 58 KYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYLL++L G ++VHLGMSG + + + P H HV L+ + Y Sbjct: 60 KYLLLDLAGAGHSVLVHLGMSGRLRMMAAAGER----PPHTHVAWLLSGGA--PPAELRY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +DPRRFG +D+VE + +P L LG +P + L + ++K LL+Q Sbjct: 114 SDPRRFGVIDVVERGNERAHPSLARLGEDPLTGALTGALLHAGSRRVRRSIKTFLLDQHT 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EALW+A++ P K L I +V A++ GG+SL Sbjct: 174 VAGVGNIYASEALWQARILPTMPA------ERLSKARADALAAAIHEVFARALEHGGTSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V+ DG G + VY + GEPC C +IRR V RSTF+C CQ+ Sbjct: 228 RDFVNADGHAGEHAHYLWVYERDGEPCPRPTCPGIIRRTVLQARSTFHCPRCQR 281 >gi|284032687|ref|YP_003382618.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] gi|283811980|gb|ADB33819.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] Length = 284 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+ + + +R P F+A+ +G+ +RR Sbjct: 1 MPELPEVEVVRRGLADFTTGRTIDAVEVLHPRPVRRHLAGPDDFAASLKGQTFAAPARRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++ HLGMSG F ++ + +H + ++ V + Sbjct: 61 KYLWLPLRSGDAVLAHLGMSGQFRVQPVGAP----DEKHLRIRFRFADDGG----EVRFL 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + E + + + +P D F+ ++ + LK ALL+Q +V Sbjct: 113 DQRMFGGLSYSEGGAELPGE-IAHIARDPFDPLFDLDAFVAGIRRRKTGLKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL + T +++ + V+ +A+D GG+S Sbjct: 172 SGVGNIYADEALWRAKLHYAKAT------ETLKPLQAREILGHARAVMSEALDVGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ +VYG+ G C G+ IRR RS+F C CQ Sbjct: 226 ALYVNVNGESGYFERGLAVYGQEGSGC-PRDGRPIRREPFMNRSSFRCPKCQ 276 >gi|225873850|ref|YP_002755309.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792432|gb|ACO32522.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 280 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 33/301 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + R F P +A G++I V R K+ Sbjct: 1 MPELPEVETVAQGVHERAHGQRILAAEFSRAREPFKTDPDTMAAVLTGQRIARVHRVGKH 60 Query: 60 LLIE-----------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 ++ + + IVHLGM+G + S P H H +SL++ Sbjct: 61 IVFDLETPRPPKGKAEPADHQWIVHLGMTGRLLYSAASVP----VPPHTHGRLSLSSG-- 114 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + + D RRFG M L + + + + F A++ + K + Sbjct: 115 ---HELRFVDARRFGRMGLHSGARAQPFSGPGSEPLHISPEDFAALFRGRKLSIKAA--- 168 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LLNQK++ G+GNIY E+L+ A + P R SL + L KL +Q+VL A Sbjct: 169 --LLNQKLLHGVGNIYADESLYWAGIRPTRIAGSLSRER------LLKLHAALQQVLRKA 220 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I+ GGSS+ DYV DG G+FQ VY + GEPC C IR++V AGR T YC CQ Sbjct: 221 IELGGSSVSDYVDADGVRGFFQLEHRVYDRAGEPC-RACAAEIRKMVHAGRGTHYCPRCQ 279 Query: 289 K 289 + Sbjct: 280 R 280 >gi|218245023|ref|YP_002370394.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] gi|226706478|sp|B7K1T1|FPG_CYAP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218165501|gb|ACK64238.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] Length = 282 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 137/297 (46%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + D + ++L F + RG + RR K Sbjct: 1 MPELPEVETVCRGLNELTSGKVIKDAEVLLPRSLASPSSVDEFLSNIRGVIFGEWQRRGK 60 Query: 59 YLLIELEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L + VHL M+G + + S I H + + N Sbjct: 61 YLLGTLVKESGEAAGWLGVHLRMTGQLLWVNQSEPLQI----HTRLRLFCGENK-----E 111 Query: 114 VIYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V + L+ LG EP + F+ Y T + + + N+K L Sbjct: 112 LRFVDIRTFGKVWCVPPKTTPETIITGLKKLGVEPFSDDFSDDYFTTKLNGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY EAL+++ + P ++L + +L I +VL AI+ Sbjct: 172 LDQEIVAGLGNIYADEALFKSGVHPTTLGKNLKPQQ------IEQLRIAIIEVLETAIEK 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|298492017|ref|YP_003722194.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] gi|298233935|gb|ADI65071.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] Length = 278 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 141/294 (47%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T DI L R + F +G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNEGITGGDILLKRTVAYPFYVSEFIDNLKGSSIKSWHRRGK 60 Query: 59 YLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL EL + + VHL M+G + + + H V + +K + + Sbjct: 61 YLLAELTPSSTCLGVHLRMTGQLLWLNQNEPLHK----HTRVRLFF-----GEKQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + + L L +P F YL ++ K +K ALL+Q Sbjct: 112 DQRTFGQMWYVPPGVPVESIIRGLAQLAVDPFSPEFTVEYLANKLQKGRRPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P L + P L I KVL +I AGG++ Sbjct: 172 IVAGLGNIYADEALFKSGILPTTLCTDLQKKQVEP------LRTAIIKVLSASIAAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++++ G G + VY +TG+PC CG +I+RI GRS+ +C+ CQK Sbjct: 226 FSNFLNVKGINGNYGGEAWVYKRTGKPC-KVCGNVIQRIKLGGRSSHFCSQCQK 278 >gi|282898822|ref|ZP_06306809.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] gi|281196349|gb|EFA71259.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] Length = 277 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHH-FSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + +T + + + + F F +G I R K Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITSGEVLLARTVAYPFAADQFIGGLKGSTIESWIRCGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL EL + + VHL M+G + P H H + L + + D Sbjct: 61 YLLAELSSSAWLGVHLRMTGQLLWLSQEE------PLHKHTRVRLFFGKEQ---ELRFVD 111 Query: 119 PRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M + + + L L +P F YL + K +K ALL+Q I Sbjct: 112 QRTFGKMWYIPSGVVREKIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P ++ +N + L I +VL +I AGG++ Sbjct: 172 VAGLGNIYADEALFKSGILPTTICTNIGENQ------IRSLRMAIIEVLSASIAAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|308189908|ref|YP_003922839.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] gi|307624650|gb|ADN68955.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] Length = 273 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + L ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKE--LFNKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC CQK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNCQK 273 >gi|93117323|gb|ABE99579.1| fpg [Neisseria meningitidis] Length = 258 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQT-GILL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|269127638|ref|YP_003301008.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] gi|268312596|gb|ACY98970.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] Length = 297 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 153/300 (51%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + +R F+A G I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAAEVLHPRAVRRHVGGAADFTARLIGNTIGAARRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--- 113 KYL + EG +I+ HLGMSG ++ + A+ H V ++ T+ ++ ++ Sbjct: 61 KYLWLPLAEGGGAIVAHLGMSGQLLVGDPARARQR----HLRVRLTFTDGSHDLRFVDQR 116 Query: 114 ----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ + F + + P+ + P+P + +F+ ++ + +K Sbjct: 117 TFGHLMVAELVPDAFGRAGKEAEAAVPAPVAHIAPDPLEPAFDDEAFYRALRRRRTGIKR 176 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +++G+GNIY EALWRA+L R T +L + + ++++ +++V+ A+ Sbjct: 177 ALLDQSLISGVGNIYADEALWRARLHWARATENLTRAE------VSRVLEGVREVMTAAL 230 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG+S YV+++G GYF+ + YG+ GEPC + CG IRR V RS++ C CQ Sbjct: 231 AAGGTSFDRLYVNVNGESGYFERSLEAYGRRGEPC-TRCGTPIRRDVFMNRSSYSCPKCQ 289 >gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|306973332|ref|ZP_07485993.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|307081038|ref|ZP_07490208.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] gi|308214424|gb|EFO73823.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|308357235|gb|EFP46086.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|308361244|gb|EFP50095.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] Length = 289 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+T++ +H +R P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHMTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + + +++VHLGMSG ++ CA H ++ L + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA------HVRISALLDDGT--- 111 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 112 --VLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|294637898|ref|ZP_06716167.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] gi|291088924|gb|EFE21485.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] Length = 248 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 143/267 (53%), Gaps = 20/267 (7%) Query: 23 VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 + + + + LR+ P A + I+ V RRAKYLL+EL I++HLGMSGS I Sbjct: 2 IDRLVVRQSRLRWPVPEALLA-LHDRPILSVQRRAKYLLLELPE-GWIVIHLGMSGSVRI 59 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 S H+H+ + LT+ + Y DPRRFG E L L Sbjct: 60 LSASTPAQK----HDHIDLRLTDG-----MCLRYTDPRRFGAWLWYE--DLATASVLAHL 108 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GPEP ++FNA YL + + + +K L++ K+V G+GNIY E+L+ A++ P R S Sbjct: 109 GPEPLSDAFNAAYLLEKARGRRTAVKPWLMDNKLVVGVGNIYASESLFSAQIHPDRLAGS 168 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 L ++ + L+Q I+ VL +ID GG++LRD++ DG GYF VYG+ GE Sbjct: 169 LSRDE------IALLVQTIKAVLQRSIDQGGTTLRDFLQADGKPGYFAQQLQVYGRAGEA 222 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQK 289 CL+ CG I+ R+T+YC +CQ+ Sbjct: 223 CLT-CGTTIKSSKHGQRTTYYCPHCQR 248 >gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae TN] gi|221230353|ref|YP_002503769.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] gi|7531120|sp|O69470|FPG_MYCLE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789446|sp|B8ZRZ2|FPG_MYCLB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3150225|emb|CAA19197.1| formamidopyrimidine-dna glycosylase [Mycobacterium leprae] gi|13093429|emb|CAC30611.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae] gi|219933460|emb|CAR71753.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] Length = 282 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +R P + G +I + RR Sbjct: 1 MPELPEVEVVRRGLQDYIVGKTITAVRVHHPRAVRRHVAGPTDLTNRLLGTRINGIDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++++VHLGMSG ++ + H ++ + T Sbjct: 61 KYLWFLLDTDIALVVHLGMSGQMLLG------TVPRVDHVRISALFDDGTVLNFTDQRTL 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + V+ S+ P+ L +P D F+ + K+S LK LL+Q+ V Sbjct: 115 GGWLLADLMTVDGSVLPV--PVAHLARDPFDPRFDVEAVVKVLRCKHSELKRQLLDQQTV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRA++ R +L + V+ D++ GG+S Sbjct: 173 SGIGNIYADEALWRAEVHGARIAATLTRRQLAAVLD------AAADVMRDSLAKGGTSFD 226 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GE C CG ++ R RS+FYC CQ Sbjct: 227 SLYVNVNGESGYFDRSLDAYGREGEGC-RRCGAVMHREKFMNRSSFYCPRCQ 277 >gi|288923599|ref|ZP_06417709.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] gi|288345061|gb|EFC79480.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] Length = 306 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 44/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + ++ +R P F+AA G+ + SRR Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIDGVEVYHPRAVRRHAAGPDDFAAALLGRTVTTASRRG 60 Query: 58 KYLLI-----------------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 KYL + S++ HLGMSG ++ + Sbjct: 61 KYLWLGLSPQGAEAAGLEAVGAAAAGAGAAGAGESLLGHLGMSGQLLVVPPDSPDQV--- 117 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H V + + + D R FG + +V + + + P+P F+ Sbjct: 118 -HLRVRFRFGDG----GRELRFVDQRTFGGLAVVSGADLPA--SIAHIAPDPLAADFDVE 170 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + ++ + LK ALL+Q +++G+GNIY EALW A+L R T ++ + Sbjct: 171 HFVDALRRRRTGLKRALLDQTLISGVGNIYADEALWAARLHYARPTETVSRAE------A 224 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 ++L++ + V+ A+ AGG+S YV +G G F+ + VYG+ GE C S C IRR Sbjct: 225 HRLLEAARTVMTAALAAGGTSFDRLYVSTEGVSGLFERSLEVYGREGEQC-SRCAAPIRR 283 Query: 274 IVQAGRSTFYCTYCQ 288 RS++ C CQ Sbjct: 284 EAFMNRSSYTCPVCQ 298 >gi|256831105|ref|YP_003159833.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] gi|256580281|gb|ACU91417.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I R L +++ + ++ LR P G+ I VSRRAK Sbjct: 1 MPELPEVETIARGLHTLVQGRRIREVLHFTPSVLRAGNPGS----LPGRTITYVSRRAKL 56 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+ + HL M+G + P+H H+ L R+I+ D Sbjct: 57 LLVHLDQGECLAFHLKMTGRVWVASPGQDL----PKHTHLVCELEGRD-----RLIFEDT 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFGF + + + LGPEP + A L + + + +K+ LLNQ ++AG Sbjct: 108 RRFGFFGIYGPQDIEAWSFYQNLGPEPLQS--TAEDLALRLGARRAGVKSLLLNQTVLAG 165 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ A++ P ++ L E+Q++L++AI AGGS++ DY Sbjct: 166 IGNIYADESLFAARIHPASLAANIPLAKRVQ------LCSELQRILLEAIAAGGSTISDY 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ++F VYGK G+PC CG+ ++ AGR++ +C CQK Sbjct: 220 RNAYGKSGIFQDSFEVYGKKGQPC-PACGRALKAEQIAGRTSTHCPRCQK 268 >gi|313836650|gb|EFS74364.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314928157|gb|EFS91988.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972156|gb|EFT16253.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907981|gb|EGG27741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. P08] Length = 282 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHH---FSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + P F A G + V R Sbjct: 1 MPELPEVETVRAGLEDHVIPAVVEGVDVIDARGLRPSGGPEDAALFQTALTGHQFTAVRR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L +++ HLGMSG F + + +H + I+L + + + Sbjct: 61 RGKYLWFVLNDGTAMLAHLGMSGQFRVVD----RHATRHRHTRIVIALNDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S LK +LL+Q Sbjct: 112 FLDQRTFGGLALAPLLDGIPGP-VVHIAPDPFEKCFDVDEVARRLRTRKSTLKKSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWRA+ P + +L+Q ++V+ +AI AGG+S Sbjct: 171 LVSGIGNIYADETLWRARYHPETPCS------YLSQPKAVELLQTAREVIAEAISAGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF YG+ +PC CG +I R RS+F C CQ+ Sbjct: 225 FDALYVNVNGESGYFSRVLDAYGRENQPC-HRCGALIVREHFMNRSSFRCPRCQR 278 >gi|227494680|ref|ZP_03924996.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] gi|226831862|gb|EEH64245.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] Length = 299 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 135/301 (44%), Gaps = 22/301 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE IR L + + ++ + + P F G KI RR Sbjct: 1 MPELPEVETIRLGLAGRVVGKEIAEVSVWNTRMVRTQPGGAQEFIYLLEGAKIQAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK------- 110 K+L +EL+ ++++HLGMSG A+ K H H+ + T+ T Sbjct: 61 KFLWLELDDAKALVIHLGMSGQVHAWDEKPAERRK---HEHIRVEFTDGTGYTHVDQRTF 117 Query: 111 -KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 K V+ P GF + + + +P D FN + + Q + +K Sbjct: 118 GKAEVVDLVPCADGFPGGRGSKMPMMPASATHIARDPLDLGFNVVTVARQLRRSAVAVKT 177 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL Q++V+GIGNIY EAL+ L SL Q L++ Q+V+ A+ Sbjct: 178 LLLKQELVSGIGNIYADEALFACGLHGSVPGSSLTQKQAV------ALLEAAQQVMRAAV 231 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG+S YV++ G GYF + VYG+ G+ C CG +I R GRS YC CQ Sbjct: 232 EVGGTSFDSLYVNVSGEPGYFAISLQVYGRNGQAC-HKCGNLILRENIGGRSHHYCGTCQ 290 Query: 289 K 289 + Sbjct: 291 R 291 >gi|297181484|gb|ADI17671.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0130_23I23] Length = 271 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 165/288 (57%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + ++ I + + +LR F + KKI V RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISTRKISSIYISKYDLRIKFNKNKKNNILNKKIEGVRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ N S+++HLGM+G+ I T + +H+H+ SL + + +IYND R Sbjct: 61 LIDFSNNYSLLIHLGMTGNLRIADT-----LSLGKHDHIAFSLNSKKH-----LIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +++ + L GP+P + S + YL + K + +K+ LLN +I++GI Sbjct: 111 RFGLILIIKKGQ--RNKLLENNGPDPFEKSADYKYLHKKIEKSKATIKSILLNNRIISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+ +K+SP++ S+ + +++ +K+L AI++GG++L DY+ Sbjct: 169 GNIYACEILFSSKISPLKLGSSITHDE------CKIILKNSKKILKKAINSGGTTLNDYL 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF+ +VY + E C C Q I+RI+Q GRSTF+C+ CQ Sbjct: 223 NADAKPGYFKIQLNVYDRESEDC-KKCSQKIKRIIQNGRSTFFCSKCQ 269 >gi|282896919|ref|ZP_06304925.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] gi|281198328|gb|EFA73218.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] Length = 277 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 134/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + +T D+ L F +G I R K Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITGGDVLLASTVAYPFAGEEFIGDIKGNTIKSWIRCGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL EL + + VHL M+G + + P H H + L + + D Sbjct: 61 YLLAELSSSAWLGVHLRMTGQLLWLNQEE------PLHKHTRVRLFFGKEQ---ELRFVD 111 Query: 119 PRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M V + + L L +P F YL + K +K ALL+Q I Sbjct: 112 QRTFGKMWHVPSGVVREEIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P ++ + + L I +VL +I AGG++ Sbjct: 172 VAGLGNIYADEALFKSGILPTTICTNIDEKQ------IGSLRMAIIEVLSASIAAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|313902129|ref|ZP_07835539.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] gi|313467592|gb|EFR63096.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] Length = 355 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 137/351 (39%), Gaps = 74/351 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD------FPHHFSAATRGKKIIDVS 54 MPELPEVE IRR+L + +T + + R + P F A G ++ + Sbjct: 1 MPELPEVETIRRDLERHLAGARITRVHVLRPEVVCGAGGEAIGPEAFRAVLEGTRLGRFA 60 Query: 55 RRAKYLLIELEG----------------------------------NLSIIVHLGMSGSF 80 RR KYLLIEL L + +HL M+G Sbjct: 61 RRGKYLLIELHRAAGDPAAGSGLNTAPVLPDEPAGRRVRPAGPGGGRLWLAIHLRMTGRL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 + + P H HV L + ++D RRFG + L+ + + Sbjct: 121 TLARRGEPR----PPHTHVVFELEPGPGRSWEELRFSDVRRFGRLYLLPDNPLARARGRP 176 Query: 141 TLGPEPADNSFNAIYLT-----------------------HQFHKKNSNLKNALLNQKIV 177 T + + + +K LL+Q++V Sbjct: 177 AKRRAGGTVPEGPHGGTGLQGLYTLGPEPLSRRFGAAELGRRLAGRRAPIKAVLLDQRVV 236 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+RA++ P R SL + +L + I+ VL +A+ AGG++ Sbjct: 237 AGLGNIYADEALFRARIHPARPAGSLTGQE------VARLARAIRSVLREAVAAGGTTFS 290 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY G G F +VY + G PC CG + + AGR++ YC CQ Sbjct: 291 DYRDGLGREGRFGRRLAVYDREGLPC-PRCGTPVAALRLAGRTSHYCPRCQ 340 >gi|170781178|ref|YP_001709510.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169155746|emb|CAQ00867.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 311 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 27/308 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHH--FSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + + G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPEPTGDRTGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPAHGELVV 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + V G ++ + + +P D +F+ L + Sbjct: 121 AFVDQRIFGSMAVDRLVATPDGHAGGRGSTAALVPTQVAHIARDPLDPAFDDEQLLSRLA 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + +K ALL+Q +V+GIGNIY EALW A++ T + + +L+ E+ Sbjct: 181 RRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPT------DQLGRGRALRLLAEV 234 Query: 222 QKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + VL A+ GG+S YV+++G+ GYF ++ + YG+ G+PC CG I R R Sbjct: 235 RHVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKPC-PRCGTPIVREAFMNRG 293 Query: 281 TFYCTYCQ 288 + +C CQ Sbjct: 294 SHFCPRCQ 301 >gi|119509416|ref|ZP_01628564.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] gi|119465822|gb|EAW46711.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] Length = 280 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L + + +T D+ L R F+ G I RR K Sbjct: 1 MPELPEVETIRRGLNQLTLHQKITGGDVLLDRTIAYPLSVDKFTPKIIGSAIASWHRRGK 60 Query: 59 YLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 YLL EL + HL M+G + + + H V + + + Sbjct: 61 YLLAELTPSPQTHWLGVHLRMTGQLLWVNQNEPLHK----HTRVRLFFGDEQ-----ELR 111 Query: 116 YNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + + L L +P F YL + + +K ALL+ Sbjct: 112 FVDQRTFGQMWWVPPGVAVETIMTGLAKLAVDPFSPEFTVEYLASKLQNRRRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY EAL+++ + P+ L + L I +VL +I AGG Sbjct: 172 QSVVAGLGNIYADEALFKSGILPVTLCIDLQLEQ------IQSLHTTIIQVLETSIAAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +++++ G G + VY ++GEPC C I+RI AGRS+ +C CQ Sbjct: 226 TTFSNFLNVQGVNGNYGGVAWVYNRSGEPC-RVCSTPIQRIKLAGRSSHFCPQCQ 279 >gi|284053014|ref|ZP_06383224.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis str. Paraca] gi|291570672|dbj|BAI92944.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis NIES-39] Length = 304 Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 92/312 (29%), Positives = 138/312 (44%), Gaps = 40/312 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L N + + + P F A I RR KY Sbjct: 1 MPELPEVETVRKGLNQTTLNQPIVGADVLLDSAIAHPCPVEFIAQINNTTINHWYRRGKY 60 Query: 60 LLIELEGNL---------------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 LL +L+ + VHL M+G + + + P+H Sbjct: 61 LLAQLQAPSQPSNPIFTSKDPIETQTSDGGWLGVHLRMTGQLLWCTSDQSL----PKHTR 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYL 156 V + L + + D R FG + LV L LR LGPEP + F+ YL Sbjct: 117 VRLFLPEER-----ELRFVDQRTFGKIWLVPPHLAVMDVISGLRELGPEPLSDEFSPEYL 171 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + +K ALL+Q I+AG+GNIY EAL+ A++ P + L + L + Sbjct: 172 ATKLRRSQRPIKTALLDQSILAGLGNIYADEALFLARIQPTTPSCRLSPDQ------LNR 225 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L I VL AI GG+++R+++++ G G + + VY + G+PC C I +I Sbjct: 226 LYTHIVAVLQQAIADGGTTIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RVCQTPITKIKL 284 Query: 277 AGRSTFYCTYCQ 288 +GR T +C CQ Sbjct: 285 SGRGTHFCPMCQ 296 >gi|297571638|ref|YP_003697412.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] gi|296931985|gb|ADH92793.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] Length = 284 Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 10/290 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L+ + T+ L + G I V RR KYL Sbjct: 1 MPELPEVETVRAGLVPHVVGKTIERADLLHSRVARMSEFGL-EPVVGATISAVVRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +++ HLGMSG F I S + + + + Sbjct: 60 WM-VTEAGALVAHLGMSGQFRINSNSKHLRARIHFTDGTALDFVDQRTFGHLHPDRLVAT 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + L +G + D + + Q + + +K +LNQ I +GI Sbjct: 119 GDGGPGGMGSDLALIPQSAAHIGRDLLDPHCDIYSVARQVKRGRTEIKRVMLNQNIASGI 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY EALW A++ P + T ++ + + + + V+ A+ GG+S Y Sbjct: 179 GNIYADEALWEARVHPKKITSAMTLTQ------IRDVYEAARDVMAAALAVGGTSFDSLY 232 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+++G GYF + +VYGKTG C CG I R+V RS+ C CQ+ Sbjct: 233 VNVNGESGYFDRSLNVYGKTGCAC-ERCGTQIERLVFMNRSSHVCPACQR 281 >gi|317125434|ref|YP_004099546.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315589522|gb|ADU48819.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 292 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ + +T + + R P + G + SRR Sbjct: 1 MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAGPEDLADRVSGTTVTAASRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G+ ++I+HLGMSG +++ + H H ++ ++ + Sbjct: 61 KYLWLVLDGDEALIIHLGMSGQMLVKPADAPREK----HCHAAFDFADD----GPQLRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + L +R + P+P + F+ + + + + S +K ALL+Q +V Sbjct: 113 DQRTFGGLALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLDQSLV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRA++ R SL K +L +++ ++V+ +A+ GG+S Sbjct: 173 SGIGNIYADEALWRARVHGERVCASLT------KPVLSRVLDHAREVMAEALTQGGTSFD 226 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G+ GYF + YG+ G PC CG +RR RS+F C CQ Sbjct: 227 ALYVNVNGASGYFDRSLHAYGRDGTPCD-RCGARMRREQFMNRSSFSCPACQ 277 >gi|227543197|ref|ZP_03973246.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181006|gb|EEI61978.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 273 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L ++ + + + G++I RR K+L Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAAR-STEALAPRLAGREICGTGRRGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+G ++++HL MSG I T+ H + L V + D R Sbjct: 60 WLVLDGAEALVIHLRMSGQMRITQTARPVSP----HTRIVAELD------GLTVQFVDQR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG L E + P+ D S + + + LK ALLNQ IV+GI Sbjct: 110 TFGSWSLSELVDGLPVTL-AHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY E LWRA+L P R+TRS + L +L+ Q V+ DA+ GG+S + Y Sbjct: 169 GNIYADEMLWRARLHP-RQTRSHVSP-----HRLTELLLAGQDVMRDALAQGGTSFDELY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 223 VNVNGESGYFDRSLNAYGKAGLPCD-RCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|295696994|ref|YP_003590232.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] gi|295412596|gb|ADG07088.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] Length = 300 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 145/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPE PEVE IRR L V++ + + + + +R P F+A G+ ++ RR K Sbjct: 1 MPEWPEVEQIRRELA-VLEGSRIAGVTVLCERTIRTPADPEEFAARLAGETWQEIGRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL ++I HL M G + + + V L + + + Y D Sbjct: 60 YLLFHGLRW-TLISHLRMEGRYRLVEAKTPVDE----YTRVIFHLEDGKD-----LRYRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MD VE +PP+ +LGPEP D L + K +K LLNQ+++A Sbjct: 110 VRKFGTMDAVERRQWEVFPPIASLGPEPFDPQLTPEVLRRRLSGKGR-IKGLLLNQRVIA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R + P R RSL +L+ +++ +L +A+ AGG+++R Sbjct: 169 GLGNIYVDEVLFRTGIHPERPGRSLTPAE------AERLLAQMRALLQEALVAGGATVRS 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV DG G Q VYG+TG+PC CG I R V AGR T C CQ Sbjct: 223 YVRSDGRPGLMQEHLFVYGRTGQPC-RVCGHSIERRVVAGRGTHICPVCQ 271 >gi|86742281|ref|YP_482681.1| formamidopyrimidine-DNA glycosylase [Frankia sp. CcI3] gi|86569143|gb|ABD12952.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. CcI3] Length = 323 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 59/331 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + +H +R FSA G++I RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIASVDVHHPRAVRRHLAGAADFSALLVGRRITAARRRG 60 Query: 58 KYLLI---------------------------------------ELEGNLSIIVHLGMSG 78 KYL + ++I HLGMSG Sbjct: 61 KYLWLVLQPPVDHAACAPVVPEEPPEEESAAVLAEMSPPALPPGHPAQGDALIAHLGMSG 120 Query: 79 SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP 138 ++ + H + T+ + + D R FG + V T P Sbjct: 121 QLLVVPPATPDQK----HLRIRFVFTDG----GRELRFVDQRTFGGLA-VATGEADLPAP 171 Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + +P D +F+ +T + ++ + +K ALL+Q +V+G+GNIY EALW AKL R Sbjct: 172 VAHIARDPLDPAFDERLVTERMRRRRTGVKRALLDQTLVSGVGNIYADEALWAAKLHYAR 231 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYG 257 T +L + + +L+ ++ V+I A++ GG+S YV DG G F+ + VYG Sbjct: 232 PTETLTRAE------VGRLLGCVRTVMIAALEVGGTSFDRLYVSADGVSGLFERSLQVYG 285 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G PC + CG +RR RS+F C CQ Sbjct: 286 RAGRPC-TRCGDAVRRDAFMNRSSFTCPTCQ 315 >gi|229820102|ref|YP_002881628.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] gi|229566015|gb|ACQ79866.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] Length = 310 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 123/299 (41%), Gaps = 18/299 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + + A G RR Sbjct: 1 MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+ + L+ +++VHLGMSG ++ + + + Sbjct: 61 KFCWLTLDTGRALLVHLGMSGQLLVRGAGQDAQDDPRHLRARIRFADDGELLFIDQRTFG 120 Query: 118 D-------PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 P G + + + + D + L + S +K A Sbjct: 121 YLTSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLLDPALRIDELVTAVRTRRSAVKRA 180 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+G+GNIY EALWRA++ P R T G P+ + +++ V+ DA+ Sbjct: 181 LLDQSLVSGVGNIYADEALWRARVHPERAT------RGLPRLAVRSVLESAAGVMQDALA 234 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV ++G+ GYF + SVYG+TG PC CG I R RS+ +C CQ Sbjct: 235 QGGTSFDALYVDVNGASGYFDRSLSVYGQTGRPC-PRCGTAIVRSEFMNRSSHWCPTCQ 292 >gi|213964684|ref|ZP_03392884.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] gi|213952877|gb|EEB64259.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] Length = 287 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 16/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + D ++ P F TRG+ ++ RR Sbjct: 1 MPELPEVESVRRGLDTYVVGGRIDDSFVYNARAVRRQPGGAAEFIGRTRGRTVVASDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K++ + L+ + +I +HLGMSG +E + +H + ++ + +N Sbjct: 61 KFMWLTLDDDSAIAIHLGMSGQLRVE-APYTPNTLSGRHTRAAFDIALPDGA-RHLINFN 118 Query: 118 DPRRFGFMDLVETSLKYQYP---PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG++ E + P + P+ + + + + L H+ K S +K LLNQ Sbjct: 119 DQRTFGWVWACELVESHGRFVPEPAAKIAPDLLEPTVDVVALAHRMMKSRSPIKAVLLNQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 IV+GIGNIY E LW AK+ L L KL++E Q VL A+ AGG+ Sbjct: 179 NIVSGIGNIYADEMLWAAKVDGRVPACDLSVRR------LAKLLREGQSVLERALAAGGT 232 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YVH++G GYF+ + + YG+ GEPC CG+ I R+ RS++ C CQ+ Sbjct: 233 SFDALYVHVNGESGYFERSLNAYGQEGEPC-PRCGRAIVRLPFGNRSSYLCPTCQR 287 >gi|303327976|ref|ZP_07358415.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] gi|302861802|gb|EFL84737.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] Length = 285 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 139/300 (46%), Gaps = 26/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R A G++I DV RR K L Sbjct: 1 MPELPEVETVARTLRPQVQECLIEGAEVLRSGSLHPLSLP-PATLAGRRIADVGRRGKLL 59 Query: 61 LIELEGNLSIIV-----------HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+ L S HL M+G ++ H L Sbjct: 60 LVHLAPPESGRTPEETAPDLLAVHLRMTGRLMVYAPGTP----PGSHTRCVFDLRTPDGD 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ R+ ++D R FG + + + R LGPEP + + + LK Sbjct: 116 RR-RLFFDDTRAFGLVLAATPEILQAWDFWRELGPEPLE--IGEREFAALLRSRGAALKA 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+QK++AGIGNIY E+L++A L P RK SL L+ ++ VL +I Sbjct: 173 VLLDQKVIAGIGNIYADESLFQAGLDPRRKASSLSPAQSRC------LLAALKDVLRRSI 226 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+RDY +G +G FQN+F+VYG+ G C+ CG+ +++I AGR+T C +CQK Sbjct: 227 AQCGSSIRDYRDANGDVGAFQNSFAVYGRGGAACV-RCGRPLQKIRVAGRATVCCPHCQK 285 >gi|226356606|ref|YP_002786346.1| formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] gi|226318596|gb|ACO46592.1| putative formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] Length = 276 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 41/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++K + + H R+ H G+++ +SRR KYL Sbjct: 1 MPELPEVETTRRKIEPLLKGRVIQRVE-HDSPHRYRDTHLAE----GRRVRGLSRRGKYL 55 Query: 61 LI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ E +L +IVHLGM+G F +E H VT+S T Sbjct: 56 MLQLVAADAADEDPHDLELIVHLGMTGGFRLEGGK---------HTRVTLSTDGGT---- 102 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + ++D RRFG M +V P L +GPEP F + + +K L Sbjct: 103 --LHFDDSRRFGKMAVVRPGEYKTMPTLAGMGPEPLSEDFREQEFV-KAAAQCGAVKPWL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A++ P + D +L Q I++V+ A++A Sbjct: 160 LSQKPVSGVGNIYADESLWMARIHPAQT--------RLKADEARRLYQAIREVMTAAVEA 211 Query: 232 GGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+L D Y DG G FQ + Y + G+PC CG I +IV R T +C CQK Sbjct: 212 GGSTLSDGTYQQHDGVSGLFQFSHRAYAREGQPC-ERCGTSIEKIVLGQRGTHFCPQCQK 270 >gi|91787193|ref|YP_548145.1| formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] gi|123355948|sp|Q12DZ5|FPG_POLSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91696418|gb|ABE43247.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] Length = 271 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 134/290 (46%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + + LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRLSFAGRIAGARIEAVSMGKP-LRWPLGCS-PQQLVGLRVLAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L L +I + + +H+H + + T + NDPR Sbjct: 59 LVDLSDGLLLIHLGMSG-----SVSFGSSLSSPGKHDHFDMVTSLGT------LRLNDPR 107 Query: 121 RFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + + + L LG EP ++F+A + + +K LL + V G Sbjct: 108 RFGAVVYAGDEHDAVAHKLLGRLGVEPLSDAFDAALFHQALKPRQTPIKQVLLGGEAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P K + K L + I++VL A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTTKASRIS------KPRAALLHRAIRQVLTQAVTKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G+FQ VY + G PC CG I+ I Q RSTFYC CQK Sbjct: 222 SNAQGEAGHFQLDAMVYDRAGMPC-KVCGSPIKSIRQGQRSTFYCVSCQK 270 >gi|294660325|ref|NP_853016.2| formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284811982|gb|AAP56584.2| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284930494|gb|ADC30433.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(high)] Length = 274 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATAKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I + H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKISQFKAKYDER---HVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L+ L +P ++ YL + K + +K+ LL+Q +VAG Sbjct: 112 RRFGTFHIHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P +K L ++ + KVL+ AI+ G+++ Y Sbjct: 172 IGNIYADEILFLSKINPAKKANELTDQQF------KEISKNATKVLLKAIELNGTTIFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 226 QFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|227488593|ref|ZP_03918909.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091487|gb|EEI26799.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 273 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L ++ + + + G++I RR K+L Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAAR-STEALAPRLAGREICGTGRRGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+G ++++HL MSG I T+ H + L V + D R Sbjct: 60 WLVLDGAEALVIHLRMSGQMRITQTARPVSP----HTRIVAELD------GLTVQFVDQR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG L E + P+ D S + + + LK ALLNQ IV+GI Sbjct: 110 TFGSWSLSELVGGLPVTL-AHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY E LWRA+L P R+TRS + L +L+ Q V+ DA+ GG+S + Y Sbjct: 169 GNIYADEMLWRARLHP-RQTRSHVSP-----HRLTELLLAGQDVMRDALAQGGTSFDELY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 223 VNVNGESGYFDRSLNAYGKAGLPCD-RCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|163840518|ref|YP_001624923.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162953994|gb|ABY23509.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 308 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 41/317 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L ++ T+ ++ + +R F A G +I VSRR Sbjct: 1 MPELPEVEVVRRGLQKLVVGRTIENVQVLDPRSIRRHLLGVEDFRAQLAGNRIGSVSRRG 60 Query: 58 KYLLIELEGNLSII-------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L + L HLGMSG +++ A + +H V I + + Sbjct: 61 KFLWLSLFYPADGHATGTALVTHLGMSGQMLMQDPEHA----DEKHLKVRIDFGPDDDLA 116 Query: 111 KYRVIYNDPRRFGFMDLVE-------------TSLKYQYPPLRTLGPEPADNSFNAIYLT 157 K + + D R FG M + E + + +P D +F+ Sbjct: 117 K-ELRFVDQRIFGGMFVSELVPTADGLPGGLGDDQPWIAAEAAHIAKDPLDPNFSLSDFA 175 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q ++G+GNIY E+LW + L L L +L Sbjct: 176 NLLKGSKIGIKRVLLDQARISGVGNIYADESLWASSLHYATPAGQLSFTQ------LDEL 229 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMI 271 I+ ++KV+ ++ GG++ YV+++G+ GYF+ + +VYG+ +PC C +I Sbjct: 230 IRNVRKVMEASLAVGGTTFDSLYVNVNGASGYFERSLNVYGRENKPCY-RCQDNGLLTLI 288 Query: 272 RRIVQAGRSTFYCTYCQ 288 RR RS++ C CQ Sbjct: 289 RRAPFMNRSSYLCPVCQ 305 >gi|320160672|ref|YP_004173896.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] gi|319994525|dbj|BAJ63296.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] Length = 271 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIR-------RNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIID 52 MPELPEV+ I R + +T + K L F G++I D Sbjct: 1 MPELPEVQTIVSVLRDGGRG-APSILGKQITAANVAWQKTLAMPDLFTFQQNITGEEIRD 59 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + RR K++ I + + + +HL MSG +E ++ + H+ + + ++ Sbjct: 60 IRRRGKFIWI-ILQSAHLFIHLRMSGDVRVEPSTSPLQL----HDRLWLEFSDG-----L 109 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPR+FG + L E GPEP D S + + K LK LL Sbjct: 110 RLVFNDPRKFGRVWLAENPQDVIGDL----GPEPLDESLSPTQFHQRLTKNRRQLKALLL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GNIY EAL+ AKL P R + SL +L+Q I++VL + I Sbjct: 166 DQNFLAGVGNIYSDEALFLAKLHPKRSSDSLSPEES------ARLLQAIRQVLEEGIRKN 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S+ D+V+ G FQN+F VY +TGEPC CG I RI + R T +C CQ+ Sbjct: 220 GASI-DWVY---RGGEFQNSFRVYQRTGEPC-PICGTPIERITVSQRGTHFCPSCQR 271 >gi|311696384|gb|ADP99257.1| formamidopyrimidine-DNA glycosylase [marine bacterium HP15] Length = 245 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 139/263 (52%), Gaps = 19/263 (7%) Query: 27 CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 + +LR+ P G+ I V RRAKYL + ++IVHLGMSGS I + Sbjct: 2 TVRNGSLRWPVPADLGEKLEGQVIKSVDRRAKYLFL-NMDRGTVIVHLGMSGSLRIITDN 60 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 H+H+ ++L + + +NDPRRFG +++ + +P + LGPEP Sbjct: 61 TP----PLTHDHIDVALQSG-----VILRFNDPRRFGCWLWADSAEE--HPLITHLGPEP 109 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 FN +L KN+ +K+ +++ ++V G GNIY EAL+++ + P RK + + Sbjct: 110 LAPEFNGAHLFRLSRGKNTPVKSFIMDNQVVVGAGNIYANEALFKSGIHPRRKAGRISLD 169 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 ++L + I++ L AI GG++LRD+V+ DG GYF + VYG+ G+PC Sbjct: 170 R------YHRLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGRGGQPC-KE 222 Query: 267 CGQMIRRIVQAGRSTFYCTYCQK 289 CG ++ I RST YC CQ+ Sbjct: 223 CGAPLKEIRMNNRSTVYCPRCQR 245 >gi|158335652|ref|YP_001516824.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] gi|189044582|sp|B0C5D4|FPG_ACAM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158305893|gb|ABW27510.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] Length = 284 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 132/297 (44%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L V M + + P F + + RR K Sbjct: 1 MPELPEVETVRLGLEKVTVGMQIMGGEVLYPRTIAHPQSPQVFIQGLQDATFLSWMRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + + VHL M+G + H V + NN Sbjct: 61 YLLSQLSFSTQQPSGWLGVHLRMTGQLLWVAQDEPVQK----HTRVRLFFVNNR-----E 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M V + + L+ LGPEP F+ Y + ++K+AL Sbjct: 112 LRFVDQRTFGQMWWVAPTEDPKQVISGLQKLGPEPFSEEFSVDYFWESLQGRKRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY EAL+ +++ P L + +L I +VL +I A Sbjct: 172 LDQALVAGVGNIYADEALFMSEIRPTTACHQLQTEQ------VQRLRTAIIEVLSTSIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+ G+PC CGQ I RI GRST +C CQ Sbjct: 226 GGTTFSDFRDLKGVNGNYGGMAWVYGRQGQPC-RTCGQTIERIKLVGRSTHFCPQCQ 281 >gi|15828781|ref|NP_326141.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pulmonis UAB CTIP] gi|17366043|sp|Q98QQ1|FPG_MYCPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14089724|emb|CAC13483.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycoplasma pulmonis] Length = 278 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ ++L ++N+ + + L + P +F G+KI+ +S K Sbjct: 1 MPELPEVRVVCKSLNEKVQNLVFKKVEIFNPKLFKEYDPSYFQEFLIGEKILKISNLGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + + +K H N + + Y + Sbjct: 61 IIYFLTNNKIMLSHLRMEGKYSFYEQKPKETLK---HIQAIFYFENGS-----ELHYRES 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + + PL + P + F ++ KK +K LL+Q IV+G Sbjct: 113 RPFGTFHIRYLNNYLKIDPLAKVAQSPGEIDFE--TFYNRLSKKALAIKPTLLDQSIVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P + KD + ++++ ++L + + GGSS+ Y Sbjct: 171 IGNIYADEILFASKIHPATPSN------LLSKDKVKEILKNAIEILDKSTELGGSSINSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G +QN V+ K GE C+ C I +I GR T++C CQK Sbjct: 225 ESLNKKEGQYQNFLKVHTKKGEFCIK-CSSKIEKIKFKGRGTYFCPTCQK 273 >gi|332527362|ref|ZP_08403418.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] gi|332111771|gb|EGJ11751.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] Length = 274 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V + L K LR+ A G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIDEPLRGAEVLAVRLG-KALRWPLGVA-PQALLGARVLPVQRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G + L + S + A H + T + DPR Sbjct: 59 WLPLLGGCGGGLLLHLGMSGSLALHPAAPAPGPHDHFDLV--------TSHGTLRLTDPR 110 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + T+ L LG EP D + + + +K LL+ +IV G Sbjct: 111 RFGAVVWSPSTADPPAATLLAALGAEPFDATLTPQSFHAALQRHRTPIKAMLLSGRIVVG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY CEAL +A + P R + +L+Q +++ L AI+ GGS+LRD+ Sbjct: 171 AGNIYACEALHQAGIHPATPCRRIGPLR------AARLLQALRETLAQAIELGGSTLRDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ+ VYG+ GEPC CG +RR+VQA R+T++C CQ+ Sbjct: 225 RDAHGMNGEFQHHARVYGRAGEPC-PRCGAAVRRVVQAQRATYFCAACQR 273 >gi|57239162|ref|YP_180298.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|58579116|ref|YP_197328.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|57161241|emb|CAH58159.1| formamidopyrimidine-DNA glycosylase [Ehrlichia ruminantium str. Welgevonden] gi|58417742|emb|CAI26946.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] Length = 269 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++ + L + T+ I ++R +LR + +G I + R+ KY+ Sbjct: 1 MPELPEVEVVCKILSTKIVGKTILKIQINRYDLRTQITEKLADIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHD-----YITMKHNHVLFFFNDNQI-----LVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ ++ + P + + +Y + +++K+ L+N KI+ GI Sbjct: 111 RFGSLTLLTYEQYLEFFKDFGIDPLSDNFNTEYLYS---SFNRKTSIKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFMAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q RSTF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCY-ICNNKISMIKQHSRSTFFCSHCQ 268 >gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] Length = 276 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE + + L ++ N T+TD+ + +NL + G KI +SRR Sbjct: 1 MPELPEVETVIKGLRPLIINKTITDLEVREENLIGYPDLSTVELKQMLIGAKIDSISRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KY+LI+L+ N +++HL M+G +++ + H H+ SL + + +N Sbjct: 61 KYILIKLDINKILVIHLRMTGKLLVKEVEEFRDK----HTHIIFSLDDGQ-----EIRFN 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + R+FG + L++ Q L TLGPEP + + + F + +K+ LLNQK + Sbjct: 112 NVRKFGRIYLIDPDRPEQAGGLATLGPEPLSDQLSLEDFKNLFTNRRGVIKSLLLNQKFI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+ + + P RK +L + K+ ++ +L I GG+S Sbjct: 172 AGIGNIYADEILYLSGIKPDRKADTLSEEEK------EKIYFNMKDILEKGIIYGGTSFS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYV+ G G FQ V+ + GE C C I++ GR++++C+ CQ Sbjct: 226 DYVNAFGEKGSFQAELKVHQREGEEC-HICSSKIKKKKIGGRASYFCSKCQ 275 >gi|312194941|ref|YP_004015002.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] gi|311226277|gb|ADP79132.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] Length = 312 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 92/320 (28%), Positives = 138/320 (43%), Gaps = 48/320 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + +R F+ G+ + RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRTIATVTVLHPRAVRRHTGGAADFAGVLVGQTVTAARRRG 60 Query: 58 KYLLI----------------------------ELEGNLSIIVHLGMSGSFIIEHTSCAK 89 KYL + +++ HLGMSG ++ S Sbjct: 61 KYLWLALSADPDRGPAPHPEPAGLAPAAAPLPAGPRDGDALLGHLGMSGQLLVVPPSAPD 120 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 H + ++ T+ + + D R FG LV+ P+ + +P D Sbjct: 121 QT----HLRIRLTFTDG----GRELRFVDQRTFG-HMLVDEGGAALPAPMAHIARDPLDP 171 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 F+ + + LK ALL+Q +V+GIGNIY EALW A+L R T +L + Sbjct: 172 LFDDTAFVAGLAARRTGLKRALLDQGLVSGIGNIYADEALWAARLHYARPTETLRGTD-- 229 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +L+ E++ VL A+ AGG+S YV +G G F+ + YG+ G PC S CG Sbjct: 230 ----ARRLLAEVRTVLTAALAAGGTSFDRLYVSTEGVSGLFERELTAYGRAGLPC-SRCG 284 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 IRR RS+F C CQ Sbjct: 285 SPIRRDSFMNRSSFSCPTCQ 304 >gi|313678500|ref|YP_004056240.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] gi|312950460|gb|ADR25055.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] Length = 279 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L +KN +T++ + L + P F + I+D+ K Sbjct: 1 MPELPEVKTVVKALKSNIKNAKITNVFVFLDKLIKNVSPQEFKEYLLNETILDIYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L + ++I HL M+G + + +H++V L N + + YND Sbjct: 61 IIFKLSKDKNLISHLRMTGKYF----TDTSLHHKRKHDYVIFELNN-----QMYLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + S + PL LG E + + L K +K+ LL+Q + G Sbjct: 112 RQFGTFHIKDESELFTTKPLDKLGKEV--DQIDPDKLHQLIKNKTIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ + ++P K P L +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILYLSGINPWTKVNK------IPYAKLIEILNNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ + PC + C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRANLPC-NKCKTLIKQETIAQRMTYYCPLCQK 272 >gi|326382853|ref|ZP_08204543.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326198443|gb|EGD55627.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 295 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 26/298 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRAK 58 PELPEVE IR L + +V D+ + R P S RGK+ RR K Sbjct: 4 PELPEVETIRLGLSAHLSGRSVRDVEVLHPRAARRHVGGPIDLSNRLRGKRFEGAERRGK 63 Query: 59 YLL---IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 Y+ + ++++VHLGMSG +I ++P H + + L + + + Sbjct: 64 YMWLLASDSADEVAVVVHLGMSGQMLIAEQGA----EDPVHLRIRVPLDDG-----HELR 114 Query: 116 YNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG LV+T + + + P+P +++F+ + ++++ +K A+L Sbjct: 115 FVDQRTFGGWHLDDLVDTGPRRLPESVAHIAPDPFEDAFDRGAVIDSLRRRDTEIKRAIL 174 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +++G+GNIY E+LWRA+L R+T G P+ L L+ +V+ +AI G Sbjct: 175 DQTVISGVGNIYADESLWRAELHGRRRT------RGIPRARLGDLVDHATQVMGEAIKVG 228 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S D YV+++G GYF+ + + YG+ G C C + R RS+F+C CQ+ Sbjct: 229 GTSFDDLYVNVNGQSGYFERSLNAYGREGLLC-RRCETPMVREAFMNRSSFFCPTCQR 285 >gi|114567528|ref|YP_754682.1| DNA-formamidopyrimidine glycosylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317553|sp|Q0AVE3|FPG_SYNWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114338463|gb|ABI69311.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 268 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ NL ++ + + ++ + R+++ + G+ I + SRR KYL Sbjct: 1 MPELPEVETIKNNLQEILP-LRIKELEIRREDILRCRDYALEE-LTGQIIEEASRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ ++ L ++ HLGMSG I+ H HV I L K+ +++Y D R Sbjct: 59 ILAVDNGLFLVFHLGMSGRLYIQEEETTVLEP---HVHVIIHLD-----KRLKLLYQDAR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L++ LG EP F YL + + +KN LLNQ +++GI Sbjct: 111 RFGGLWLLK----DTQCFFSRLGKEPLSEEFCPRYLEQVLQGRQTAIKNLLLNQNLISGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ SL + L I++VL +I G++ RDY Sbjct: 167 GNIYADEALFMAGIRPDRQAASLSVRE------IEGLCCGIKEVLAKSIKYRGTTFRDYR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN VYG+ + C NCGQ ++R GRS+ YC CQ+ Sbjct: 221 DGKRQPGEFQNHLQVYGRFNQAC-PNCGQPLKRSRIGGRSSHYCEKCQQ 268 >gi|111225161|ref|YP_715955.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111152693|emb|CAJ64434.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Frankia alni ACN14a] Length = 321 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 86/330 (26%), Positives = 143/330 (43%), Gaps = 57/330 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + P F+A G+++ RR Sbjct: 1 MPELPEVEVVRRGLQRGVVGRVIASVAVCHPRAVRRHPAGAGDFAALLVGQRVTAARRRG 60 Query: 58 KYLL-------------------------------------IELEGNLSIIVHLGMSGSF 80 KYL + ++I HLGMSG Sbjct: 61 KYLWLALRTDLAAAVAAAAPALAIEPGTEGAPAGLPVLESPPSAAPDDALIAHLGMSGQL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 ++ + H + + + + + D R FG + + + P + Sbjct: 121 LVVPPTTPDQR----HLRIRFTFVDG----GRELRFVDQRTFGGLAVAVGGGELPEP-VA 171 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + +P D +F+ + + + + +K ALL+Q +V+G+GNIY EALW A++ T Sbjct: 172 HIARDPLDPAFDEDLVVRRLRDRRTGVKRALLDQTLVSGVGNIYADEALWAARMHYAHPT 231 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKT 259 +L + + +L+ ++ V+I A+DAGG+S YV DG G F+ + +VYG+ Sbjct: 232 ETLTRPE------VRRLLDCVRTVMIAALDAGGTSFDRLYVSTDGVSGLFERSLAVYGRA 285 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+PC CG IRR RS+F C CQ+ Sbjct: 286 GQPCG-RCGDTIRRDAFMNRSSFTCPTCQR 314 >gi|222475256|ref|YP_002563672.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] gi|222419393|gb|ACM49416.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] Length = 292 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 136/287 (47%), Gaps = 22/287 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 14 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +H+HV + L + V++NDPR Sbjct: 74 VFVLSRGERVMFHLGMSGRMAHVRPYVRE-----KHDHVALLLDGG-----FHVVFNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV P + + +K+ L+N IVAGI Sbjct: 124 RFGAVLLVNFQAYENIASRIGPDPLS-----AEFNAEYLMRPSKACVKSVLMNNAIVAGI 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 179 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ G FQ F VY + G+PC + CG I + GRSTF+C C Sbjct: 233 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALC 278 >gi|317506413|ref|ZP_07964218.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] gi|316255293|gb|EFV14558.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 90/293 (30%), Positives = 141/293 (48%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + P +AA G+ ++ V RR Sbjct: 1 MPELPEVEVVRRGLAEELAGARLRQVRVLHPRAARRHPGGGALLAAALAGRDVLAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G S+++HLGMSG F I NP H + L + + + Sbjct: 61 KYLWLVLDGEDSVVMHLGMSGQFRIGEEG---MPGNPNHLRIEADLADGRTLQFFDQR-- 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + F L E + P+ + +P D F+ + + K S +K LL+Q ++ Sbjct: 116 TFGGWEFAPLKEVDGELVPVPVAHIARDPFDPKFDPVQAARRIRAKRSAIKRVLLDQTVL 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY E+LWRA+L R + L+ E+ V+ ++I GG+S Sbjct: 176 SGVGNIYADESLWRARLHGERPAAE------LGQRKAVALLGEVASVVHESITEGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G F + +VYG+ G+PC CG IRR RS+ +C CQK Sbjct: 230 SLYVNVNGESGQFSDWLAVYGQEGKPC-RRCGAAIRREAFMNRSSHFCPKCQK 281 >gi|4511987|gb|AAD21547.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 252 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 148/270 (54%), Gaps = 19/270 (7%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 + D+ + R +LR P G II +SRRAKY +I + + ++I HLGMSG Sbjct: 2 GEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYGIIVNDRDDALIFHLGMSGR 61 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + I + K H+H + NN + V DPRRFG +DLV+ + ++ Sbjct: 62 WKINPENFEK------HDHFVLQTKNN-----FIVSLYDPRRFGSLDLVKKNQLLEWSYF 110 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R +GPEP +FN YL + ++ ++ LL+QK+VAGIGNIY CEAL +AK+ P R Sbjct: 111 RNIGPEPLTGNFNPEYLQKKLFSSSAPIREILLDQKVVAGIGNIYACEALHQAKIHPQRP 170 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 +++L + + L+ I+ +L AI GGS+L+DY +G +GYF F VYGK Sbjct: 171 SKNLNFDE------ITSLVFSIKNILQKAIAEGGSTLKDYARPNGELGYFSTKFKVYGKE 224 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GE C CG I R GRSTF C+ CQK Sbjct: 225 GEQCE--CGHTIERYTLGGRSTFLCSSCQK 252 >gi|81300132|ref|YP_400340.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] gi|60416387|sp|Q08079|FPG_SYNP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81169013|gb|ABB57353.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] Length = 282 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 133/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L T + + + P F A + +I + RR KY Sbjct: 1 MPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQQTQIQEWRRRGKY 60 Query: 60 LLIE----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LL + E + VHL M+G F + H V + + + Sbjct: 61 LLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLTK----HTRVRLRFEGDR-----ELR 111 Query: 116 YNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + L LGPEP F A YL + + +K ALL+ Sbjct: 112 FIDIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAGIGNIY E+L+R + P + L K KL + I +VL +I AGG Sbjct: 172 QSLVAGIGNIYADESLFRTGIHPTTPSDRLT------KIQAEKLREAIVEVLTASIGAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G G + VYG+ +PC CG I+++ AGRS+ +C CQ Sbjct: 226 TTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLAGRSSHFCPRCQ 279 >gi|283851990|ref|ZP_06369266.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] gi|283572714|gb|EFC20698.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] Length = 289 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 144/307 (46%), Gaps = 36/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + V I + + ++ A G+ + VSRRAK Sbjct: 1 MPELPEVETIARALAPGLVGRVVVGIEAPDRKVLAAPKTRAAWARAAAGRTVTAVSRRAK 60 Query: 59 YLLIE----------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 LL+ E L HL M+G F I T P + + + Sbjct: 61 LLLVHLGPAPAPGSLPGAPDLDEDTLLFAFHLKMTGRFHIAPTDAP----PPAYARLLVR 116 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + + ++++D RRFG L+ +P TLGPEP D + Sbjct: 117 LDDGQS-----LVFSDMRRFGTARLLTPQALSDWPFYATLGPEPWD--MTPEAFEAALSR 169 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + +K LL+Q ++AGIGNIY E+L+ A + P +SL KL+ +Q Sbjct: 170 RTTRIKAVLLDQTVMAGIGNIYADESLFAAGIRPDTPAKSLSAGQR------QKLLAAVQ 223 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ AI AGGS++RDY DG G FQ+ F+VYGK GEPC C ++ AGR++ Sbjct: 224 AVIGRAIAAGGSTIRDYRTPDGVEGGFQHQFTVYGKAGEPC-PGCRAVLVAAKVAGRTST 282 Query: 283 YCTYCQK 289 +C +CQK Sbjct: 283 FCPHCQK 289 >gi|58617172|ref|YP_196371.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] gi|58416784|emb|CAI27897.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] Length = 269 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ + L + T+ I ++R +LR +G I + R+ KY+ Sbjct: 1 MPELPEVEIVCKILSTKIVGKTILKIQINRYDLRTQITEKLVDIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHDYVT-----MKHNHVLFFFNDNQI-----LVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ ++ + P + + +Y + +++K+ L+N KI+ GI Sbjct: 111 RFGSLTLLTYKQYLEFFKDFGIDPLSDNFNTEYLYS---TFNRKTSIKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFTAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q GR+TF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCY-ICNNKISMIKQHGRNTFFCSHCQ 268 >gi|87303067|ref|ZP_01085865.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] gi|87282234|gb|EAQ74194.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] Length = 281 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +K + + + R+ + F A G + SRR K Sbjct: 1 MPELPEVETVRRGLERQLKGFEIERVEVLRQRAIAAPEEVDQFRAGLIGCLVGTWSRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ EL + H G+ + +P + H V + + D Sbjct: 61 YLMAELSRDGQSAGHWGVHLRMTGQFLWLEEPREPCAHTRVRCWSRLGQ-----ELRFID 115 Query: 119 PRRFGFMDLVETSLKYQYPPL--RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M + L + LGPEP +F+ YL + +K ALL+Q + Sbjct: 116 VRSFGQMWFIPCGLDCSCVMTGLQKLGPEPFSEAFSGAYLQQKLKGSVRPIKAALLDQAL 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ A ++P R++ SL + +VL +I +GG++ Sbjct: 176 VAGVGNIYADESLFTAGVAPQRRSGSLSLLELERLRR------SLIEVLEISIGSGGTTF 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ + G+ G + VY + G+PC CGQ I+R GRS+ +C+ CQ+ Sbjct: 230 SDFRDLSGTNGNYGGVAWVYRRGGQPC-RRCGQPIQRERLGGRSSHWCSNCQR 281 >gi|145637250|ref|ZP_01792911.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269502|gb|EDK09444.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 251 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 140/270 (51%), Gaps = 20/270 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHT-EKGYIIGHLGMSGSVRIVPQDSA----IDKHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTE--NLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 DG GYF VYG +PC CG+ Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGRK 250 >gi|212703530|ref|ZP_03311658.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] gi|212673030|gb|EEB33513.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] Length = 286 Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + + + R+ G +I V RR K Sbjct: 5 MPELPEVETVVRTLRPQVLDCCIERVDVFRERSLHPLSLP-VERLAGTRISAVRRRGKLA 63 Query: 61 LIELEGNLSII---------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ELE + VHL M+G F++ A +H + L + + Sbjct: 64 LLELEPPAAAAAVPVPSLLAVHLRMTGRFMVHPEGAA----PLKHTRIIFHLR-RLDGIR 118 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ ++D R FG + L ++ + +K AL Sbjct: 119 AQLFFDDVRSFGLVFAATPELLDRWDFW---CSLGPEPLELGPGELGPRLHGRRAIKAAL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q ++AGIGNIY E+L+RA + P R L + +L +Q+VL ++I Sbjct: 176 LDQTVLAGIGNIYADESLFRAGIDPRRPAGELSEAE------AERLRIALQEVLRESIAQ 229 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GSS+RDY +G++G FQN F VYG+ G+ C CG + + GR+T +C CQ Sbjct: 230 CGSSIRDYRDANGNVGAFQNTFFVYGRGGQAC-RRCGTELEKSRIGGRATVFCPQCQ 285 >gi|58698441|ref|ZP_00373350.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] gi|58535033|gb|EAL59123.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] Length = 265 Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 103/281 (36%), Positives = 158/281 (56%), Gaps = 18/281 (6%) Query: 8 EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGN 67 E+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY + +G+ Sbjct: 2 EVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYTIWNTDGS 61 Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 +++I+HLGMSG I A+ H+HV ++NT+ +I+NDPRRFG + + Sbjct: 62 MAVIIHLGMSGKLIYAEHDQAQNK----HDHVVFLFSDNTS-----IIFNDPRRFGLVIV 112 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + + G EP + F+ YL K +N+K+AL++ K++ G+GNIY E Sbjct: 113 LNKEQEIN--FFDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVGVGNIYASE 170 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 +L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY GS G Sbjct: 171 SLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSAG 224 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 225 YFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 264 >gi|78355589|ref|YP_387038.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217994|gb|ABB37343.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 295 Score = 167 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 96/309 (31%), Positives = 141/309 (45%), Gaps = 34/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + +T++ + F A T G+ I V RR K L Sbjct: 1 MPELPEVETIARGLAPELTGRRITEVEVFNAGSVQGDREVFDACTPGRVIAGVGRRGKLL 60 Query: 61 LIE--------------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 L+ + + HL MSG I H + Sbjct: 61 LVHLEKERRQGAACRAVLDHRPAGDTPDMLAFHLRMSGRLFIYGPE----QLPGPHTRII 116 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 I+L + R+ ++D R+FG + + + TLGPEP D QF Sbjct: 117 ITLDSGR-----RLFFDDARKFGSCRALSPFSRPLWRFWATLGPEPLDVDRE--TFIEQF 169 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q ++AG+GNIY E+L+RA + P + ++ + L +L E Sbjct: 170 AERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDE--AERRLGRLYDE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +++VL +AI GSS+RDY G G FQN F VYG++G C+S C + AGR+ Sbjct: 228 LREVLREAISECGSSIRDYRDARGDAGAFQNCFRVYGRSGMQCVS-CRDALTTARVAGRT 286 Query: 281 TFYCTYCQK 289 T YC+ CQK Sbjct: 287 TVYCSNCQK 295 >gi|240047522|ref|YP_002960910.1| formamidopyrimidine-DNA glycosylase [Mycoplasma conjunctivae HRC/581] gi|239985094|emb|CAT05087.1| DNA glycosylase [Mycoplasma conjunctivae] Length = 271 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + R L + +T I + N + P +F A + IID+ AK+ Sbjct: 1 MPELPEVVTVVRALSQKIIGKKITQIKIRSDNFIKEISPKNFIAEVKNATIIDIKNHAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ N II HL M+G + K K H+++ ++ + + YND Sbjct: 61 ILIFLDNNKVIISHLRMNGKYFTY-----KSAKWFAHDYLQFIFSDQS-----VLNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L Y PL+ + EP D + + K N +K LL+QK++ G Sbjct: 111 RKFGTFHLRRLESLYSLAPLKNVASEPFD--IDVEQFFAKLQKINKTIKAVLLDQKLIGG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + K+SP+ ++L + LI+ +++L +I GGSS+ Y Sbjct: 169 IGNIYADEICFATKISPLTIAKTLNFQE------VKLLIENAKRILAASIKLGGSSINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K G+PC C Q I ++ AGR T+ C CQK Sbjct: 223 TSLNAKQGSFQNFLQVHTKVGKPC-PVCQQTIVKLKVAGRGTYVCNQCQK 271 >gi|282857884|ref|ZP_06267090.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] gi|282584266|gb|EFB89628.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] Length = 294 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+++ ++ + + L R+++ P F G+ + + RR K+ Sbjct: 1 MPELPEVEMVKNVTAPQIRGRRIEKVALERRDVIAHPAPDDFVELVTGRAVTGMGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ +++HL M+G ++ H SL+ + ++ + D Sbjct: 61 LRFFLDDGAEMVLHLRMTGRLLVVPPEFPAEK----HTRAVFSLSG-----RLQLRFADL 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L+ + + LGPEP D +++L + +K LL+Q++VAG Sbjct: 112 RRFGRFWLL-QKGEKDCTGMDKLGPEPFDAGLTSVWLKERLGASRRAVKTCLLDQRVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A++ P R SL + +L + I++V+ ++ S ++ Sbjct: 171 IGNIYGDEILFAARIRPTRAASSLSRPEW------ERLTRAIREVMRFHVEQIDVSAEEF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ VYG+ G+PC CG ++R V GRS+ +C CQK Sbjct: 225 LRGRGTEYRNTPLLKVYGRDGDPC-PVCGATLQRAVVGGRSSVFCPRCQK 273 >gi|33239822|ref|NP_874764.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931231|sp|Q7VDK6|FPG_PROMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33237348|gb|AAP99416.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 283 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 90/299 (30%), Positives = 139/299 (46%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L +K+ + D+ + F G K + +RR K Sbjct: 1 MPELPEVETVKRGLKNRLKDFYIHDVEVITPRSISSEGGSKAFVKNIIGLKSGEWTRRGK 60 Query: 59 YLLI------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ E +VHL M+G F K K+ +H V I + Sbjct: 61 YLICSLHSSDREEIAGWWVVHLRMTGQFQWFQ----KKTKSCKHTRVRIWNKDGA----- 111 Query: 113 RVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M + + L+ LGPEP FN YL K+ ++K++ Sbjct: 112 EIRFVDTRNFGQMWWISPTFLPTEKITGLKKLGPEPFSKEFNPFYLQESLKKRKRSIKSS 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q IVAG GNIY E+L++A + P ++++ K + K+ + +L +I Sbjct: 172 LLDQSIVAGAGNIYADESLFQAGILPTKESKK------LNKTEIKKICTSLTHILKISIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S +D+ ++G G + VYG+ +PC CG I + AGR T +C CQK Sbjct: 226 EGGTSFKDFRDLEGVNGKYGGQAWVYGRENKPC-RKCGVKILKAKVAGRGTHWCPNCQK 283 >gi|223940228|ref|ZP_03632088.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] gi|223891115|gb|EEF57616.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] Length = 284 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 139/307 (45%), Gaps = 42/307 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEI+ R+L ++ N +TD+ + R L A G + +SRR KY Sbjct: 1 MPELPEVEILVRHLAPLITNKKITDVEIRRSKVLAPTTASDLEEALTGARFTHLSRRGKY 60 Query: 60 L-----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L ++ L ++ HLGM+G + K P+H V + + R Sbjct: 61 LLFFLKSPRMQCPLQLLGHLGMTGRMYL----LPKNAGLPKHAAVIL------GLGRERF 110 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++ D R FG L SL P EP F Y H + +K LL+Q Sbjct: 111 VFEDTRYFGRFTLDTRSLAALGP-------EPWSPEFTDEYFHHALKRSTQPVKVKLLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +VAG+GNIY EAL+RA +SP + + L + IQ+VL AI G + Sbjct: 164 SLVAGVGNIYASEALYRAGISPK------LSSRKIKPIQAKHLRKAIQEVLEQAIQCGST 217 Query: 235 SLRDYVHIDGSIGYF------------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 D+V I+G G+F Q VY + G+ C CG I+R VQA RSTF Sbjct: 218 LPLDFVGIEGKNGHFYYGSAGDSSEFYQERLLVYDRLGQSCGK-CGAGIKRFVQAARSTF 276 Query: 283 YCTYCQK 289 YC CQ+ Sbjct: 277 YCPRCQR 283 >gi|270308552|ref|YP_003330610.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] gi|270154444|gb|ACZ62282.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] Length = 270 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + +T I F+ G ++ ++SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRIEALWAKTLCPPETEFNKLVSGLQVTELSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L G L I VHL MSG + P+ L N +V + D R Sbjct: 61 IISLSGGLFISVHLKMSGGLTAVKAENGQ---PPRFTRAVFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ + GPEP + F L+ + ++ +K LL+Q+++AG+ Sbjct: 113 KFGRINLLTSLDTILEKL----GPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L++A L+P+R SL + + L I+ VL AI G+S+ Y Sbjct: 169 GNMYADETLFKACLNPLRPADSLSKAE------VINLHSAIRSVLYKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ ++C +CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGESC-PICGAPITRQLIRQRACYFCPHCQ 269 >gi|184200694|ref|YP_001854901.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] gi|183580924|dbj|BAG29395.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] Length = 309 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 141/309 (45%), Gaps = 27/309 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV + + ++LR F G + RR Sbjct: 1 MPELPEVEVVRRGVERWVVGRTVESVQVFDARSLRRHTAGVLDFQERLAGLTVESAQRRG 60 Query: 58 KYLLIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L + + + +++VHLGMSG ++ +P ++ + + Sbjct: 61 KFLWLPLRERTGSKPSQALLVHLGMSGQLLVASADQPQPRHERIRLALSPAHDDAGAALP 120 Query: 112 YRVIYNDPRRFGFMDLVE-----TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + D R FG M L + +P D F+ ++ + Sbjct: 121 EQARFVDQRIFGGMLLDPLAPSTDGHGTVPEHAAHIARDPLDPLFDVDAFHTALRRRRTG 180 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK ALL+Q +++GIGNIY EALW AKL T ++ +L+ Q+V+ Sbjct: 181 LKRALLDQGLISGIGNIYADEALWAAKLHWAAPTETMTAPRT------RELVAACQEVMR 234 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRIVQAGRS 280 A++AGG+S YV+++G GYF + + YG+ G+PC C +I R A RS Sbjct: 235 RALEAGGTSFDSLYVNVNGESGYFSRSLNAYGRAGQPC-PRCEAAGLDGVIVREQFANRS 293 Query: 281 TFYCTYCQK 289 ++ C+ CQ+ Sbjct: 294 SYRCSRCQR 302 >gi|77359412|ref|YP_338987.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] gi|76874323|emb|CAI85544.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] Length = 258 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 129/277 (46%), Gaps = 20/277 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + N VT + +H ++R+ P G + V RRAKYLL+ S I+ Sbjct: 2 GITPHVLNQVVTKVNIHNGSMRWPVPDDVYQ-LTGLTVTGVERRAKYLLLH-CALGSTIL 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSG+ + + H+H+ N + NDPRRFG + + Sbjct: 60 HLGMSGNLRVVSANEPLKK----HDHIEFIFANGK-----ALRLNDPRRFG--CCLWQAP 108 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + L LGPEP + F A + Q K +K ++N IV G+GNIY E+L++A Sbjct: 109 GSVHKLLAKLGPEPLTDEFFAKQVYQQSRNKKVPVKQFIMNNAIVVGVGNIYANESLFKA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P R+ + LI I+ L AI GG++L+D+ DG GYF Sbjct: 169 GIDPRREAGKVSLK------SFEALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQ 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PCL C ++ + RST +C CQK Sbjct: 223 LLVYGRKGQPCL-VCKSELQEVRLGQRSTVFCGKCQK 258 >gi|289450873|ref|YP_003475024.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185420|gb|ADC91845.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 280 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR+L + + +T + + P R K+ ++RR KYL Sbjct: 1 MPELPEVENIRRSLAPHLLDEYLTLKQPFHPQV-WINPGDLP--CRDVKVTAINRRGKYL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY-RVIYNDP 119 L+ NL ++ HL M+G F + + H HV +++++ + + Y+DP Sbjct: 58 DFVLDSNLHLVAHLRMTGRFTYTEDLASPCLP---HTHVIFAVSHSVGLPAHAELRYSDP 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTL--GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + L+ + Y + + A LT ++ +K+ LL+Q ++ Sbjct: 115 RRFGRLILLNDTELKSYKFGYNSLGAEPLSPDFTPAYLLTAASKHPHAKIKSFLLDQTVI 174 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+ +L P S+ + +++ E ++L +I G++ R Sbjct: 175 AGLGNIYADEILYACRLHPCIPVGSISEA------AWEQVVNETIRLLSLSIANHGTTFR 228 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY DG G FQ+ VYG+ G+ C C ++ +GRST YC CQ Sbjct: 229 DYRDGDGKRGGFQSLLCVYGRAGQAC-PRCNGILATTRISGRSTVYCPQCQ 278 >gi|148272539|ref|YP_001222100.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830469|emb|CAN01404.1| fpgA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 311 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 27/308 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHH--FSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + + G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPDPGRDATGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPVHGELVV 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + V P G + + + +P D +F+ L + Sbjct: 121 AFVDQRIFGSMAVDRLVPTPDGHAGGRGSDAASVPTQVAHIARDPLDPAFDDELLLDRLA 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + +K ALL+Q +V+GIGNIY EALW A++ T + + +L+ E+ Sbjct: 181 RRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPT------DALARGRALRLLAEV 234 Query: 222 QKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 ++VL A+ GG+S YV+++G+ GYF ++ + YG+ G PC CG I R R Sbjct: 235 RQVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGRPC-PRCGTPIVREAFMNRG 293 Query: 281 TFYCTYCQ 288 + C CQ Sbjct: 294 SHLCPRCQ 301 >gi|89900446|ref|YP_522917.1| formamidopyrimidine-DNA glycosylase [Rhodoferax ferrireducens T118] gi|122479442|sp|Q21XW7|FPG_RHOFD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89345183|gb|ABD69386.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodoferax ferrireducens T118] Length = 271 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 135/290 (46%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLSFAFEIAGARVISVRIGKP-LRWPLGCS-PTQLAGRSVQAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++VHLGMSGS H+H ++ T + DPR Sbjct: 59 LIDLDQGL-LLVHLGMSGSLSFARQLPP----AGAHDHFEMT------TTLGTLRLTDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + + + L LG EP + F+ + ++ + +K LL V G Sbjct: 108 RFGAVVYAKGEDAPEAHKLLGKLGMEPLSDDFDVDRFHDELKRRRAAIKQVLLAGDTVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P L + +L I+ VL A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFMAGIRPTLSAARLSRPRS------ARLHAAIRDVLARAVATGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G+FQ VY + G+PC C I+ + Q RSTFYC +CQK Sbjct: 222 SSAKGENGHFQLEAMVYARQGQPC-RVCATPIKSLRQGQRSTFYCPHCQK 270 >gi|72383541|ref|YP_292896.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] gi|90101309|sp|Q46H41|FPG_PROMT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72003391|gb|AAZ59193.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] Length = 282 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + I + R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIVSVKNSYLGSWERRGK 60 Query: 59 YLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL+ E ++VHL M+G F + K + +H V Sbjct: 61 YLIGSLLTKEKFSKGFLVVHLRMTGQFKL----LEKEVLACKHTRVRFFDERGR-----E 111 Query: 114 VIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M V S+ ++ LGPEP + FN+ YL KK ++K+AL Sbjct: 112 LRFIDIRNFGQMWHVPSSRSIPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ VAG+GNIY E L+ A ++P +++R+L L +L + K+L +I Sbjct: 172 LDQETVAGVGNIYADETLFDAGINPKKESRNLKSTE------LKRLCNSLVKILNISIGE 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 226 GGTTFSDFRDLEGINGNYGGQAWVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 4207] Length = 304 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 149/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H +R P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + + +++VHLGMSG ++ CA H ++ L + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA------HVRISALLDDGT--- 126 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 127 --VLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 297 Query: 287 CQ 288 CQ Sbjct: 298 CQ 299 >gi|313899426|ref|ZP_07832936.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] gi|312955714|gb|EFR37372.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] Length = 276 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + + +T + N+ + F GK I R KY Sbjct: 1 MPELPEVETVVRTLEHQLDRVMITGCEVFWNNIIGYPDAAIFCRDIVGKTIQGYYRHGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +L I H+ M G F ++ H HV + L++ ++ Y+D Sbjct: 61 MRFDLGDMEWI-CHMRMEGKFYVQQPQEPYDK----HVHVILQLSDGR-----QLRYHDT 110 Query: 120 RRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L E + YP + +G + D A ++ H HKK + LK LL+Q+ +A Sbjct: 111 RKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLDQRYIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + + P L + + +LI I+++L AI AGG+++R Sbjct: 171 GIGNIYADEICFAMHMHPETMINHLRKKDF------EELIYHIRRILNGAIRAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C CG I++IV A R T +C CQ+ Sbjct: 225 YTSQLGVDGRFQLKLKVHAKKGEAC-PVCGTKIKKIVVATRGTCFCPTCQR 274 >gi|220905063|ref|YP_002480375.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869362|gb|ACL49697.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 313 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 94/322 (29%), Positives = 141/322 (43%), Gaps = 44/322 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK-- 58 MPELPEVE + R L ++ + D + R + RG +I DV RR K Sbjct: 1 MPELPEVETVARTLRPHVQGRIIADAQVLRPTSQHPLSLPL-QDLRGCRIADVVRRGKLL 59 Query: 59 ----------YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ------------- 95 + NL + VHL M+G + + Sbjct: 60 LLLLDPTEAEKTCVRGMQNLCLAVHLRMTGRLMTYAAKTSPGTHTRCILDLKALPATAGG 119 Query: 96 ---------HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 + + + R+ ++D R FG M + ++P R LGPEP Sbjct: 120 QAAAECGPAGGAGVPGAEDCLTSGERRLFFDDVRAFGTMLAGTPEMFARWPFWRELGPEP 179 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 D K S +K LL+QK++AG+GNIY E+L+ A + P RK L + Sbjct: 180 LD--ITEAAFAASIAAKRSAIKAVLLDQKMLAGVGNIYADESLFAAGIDPRRKGSELTRL 237 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 +L+Q ++ VL+ +I GSS+RDY DG++G FQN F+VYG+ G+ C + Sbjct: 238 QAD------RLLQCLRDVLLLSISQCGSSIRDYRDADGNVGAFQNTFAVYGRGGQKCKT- 290 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG ++ + AGRST +C CQ Sbjct: 291 CGSLLEKAKVAGRSTVFCPQCQ 312 >gi|257068989|ref|YP_003155244.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] gi|256559807|gb|ACU85654.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] Length = 313 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 35/317 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+TD+ L + AA G + V+RR Sbjct: 1 MPELPEVEVVRRGLAPRTLGRTITDVELLDARIIRRQAGGADRLRAALEGSALTAVARRG 60 Query: 58 KYLLIELEGNL------SIIVHLGMSGSFIIEHTS----------CAKPIKNPQHNHVTI 101 K+L L +++ HLGMSG +H +++ Sbjct: 61 KFLWWRLADPDGADTGEALMGHLGMSGQLRFATPGAPAAAPSAASEGPASDPLRHRRLSL 120 Query: 102 SLTNNTNTKKYRVIYNDPRR--------FGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 L + G + V + + + D + + Sbjct: 121 HLDDGARLDLVDQRLFGGLWTSPLVEAADGSLAAVGSPDALLPEGAAHIARDLLDPAADL 180 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + + S +K LLNQ+IV+GIGNIY EALW A+ +L Q Sbjct: 181 PAIARALRTRRSAVKTLLLNQEIVSGIGNIYADEALWAARTRYDTPGTALSQRRALG--- 237 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 +++ + V+ A++ GG+S YV++DG GYF + + YG+ GEPC + CG+++R Sbjct: 238 ---ILRAARAVMERALEVGGTSFDALYVNVDGRSGYFARSLAAYGREGEPC-TRCGRLLR 293 Query: 273 RIVQAGRSTFYCTYCQK 289 R+V GRS+ YC CQ+ Sbjct: 294 RVVHQGRSSHYCPRCQR 310 >gi|325000485|ref|ZP_08121597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudonocardia sp. P1] Length = 280 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + V + + P F+A G+ + +RR Sbjct: 1 MPELPEVEVVRRGLADHVLDRRVAAVEVLHPRAVRRHPTGSADFTARLTGRTLRAAARRG 60 Query: 58 KYLLIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL +EL+ + +++ HLGMSG ++E + + +H V + ++ ++ Sbjct: 61 KYLWLELDTAEAGDDALLAHLGMSGQMLVEDPAEP----DEKHLRVRLRFDDDGPELRFV 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + P+ + +P D +F+A ++ + +K ALL+ Sbjct: 117 DQRTFGGLSVHPLAPASGGGLLPEPVAHIARDPMDPAFSADDTVAALRRRRTEVKRALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA+L +R T L + G + ++ V+ A+ GG Sbjct: 177 QTVVSGIGNIYADEALWRARLHGLRPTEKLTRAQG------HAVLDAATTVMTAALAQGG 230 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +S YV+++G+ GYF + +VYG+ C CG IRR RS+F Sbjct: 231 TSFDALYVNVNGASGYFDRSLNVYGQVDRAC-PRCGTPIRRDAFMNRSSF 279 >gi|126657399|ref|ZP_01728558.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] gi|126621386|gb|EAZ92098.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] Length = 278 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + TV + L + F + R+ K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTVRGGKVLLPRTLAYPVSTQEFLEQIQNATFGQWQRKGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ + + VHL M+G + H + + + + + Sbjct: 61 YLLVPLEDDKGWLGVHLRMTGQLLWVQQDEPLSR----HTRLRLFCD-----RSQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V + L+ LGPEP +F+ Y + + N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPHTPPETIITGLQKLGPEPFSKAFSLDYFRDKLKGRQRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY EAL+++ + P + L Q + +L + +VL AI GG++ Sbjct: 172 VVAGMGNIYADEALFKSGIRPTTLGKELSQPQ------IKELRIVMIEVLKTAIKEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ + G G + VYG+ +PC CG I RI GRS+ +C CQ+ Sbjct: 226 FSDFRGVTGINGNYSGIAWVYGRHNQPC-RVCGTPIERIKLGGRSSHFCPQCQQ 278 >gi|320527461|ref|ZP_08028642.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] gi|320132174|gb|EFW24723.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] Length = 268 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 132/289 (45%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + D+ + + + F + + RR KYL Sbjct: 1 MPELPEVETVLRTLEHQIQGRKILDVDVRYSKMIENDIEQFKQQLKNQTFNTFMRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ ++ HL M G + I+ + H HV L N + Y D R Sbjct: 61 LFGLDDC-ILMSHLRMEGRYYIQDPTEPTNR----HMHVIFHLDNGK-----ELRYMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ + + LGPEP D +FNA Y+ K + LK+ LL+Q VAGI Sbjct: 111 KFGRMEILPLDTDFSH--YHGLGPEPFDEAFNASYIHAYRKGKRTPLKSLLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L L P R + + + L+ +++L AI AGG+++R Y Sbjct: 169 GNIYADEILAACNLRPGRSCARITRKDE------ENLVMHTRRILKAAIAAGGTTIRTYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ +V+ + C I GRS++YC +CQK Sbjct: 223 SSLGVTGRFQTECTVHM---QKICPRCKGQIHVKYIGGRSSYYCPHCQK 268 >gi|325283264|ref|YP_004255805.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] gi|324315073|gb|ADY26188.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] Length = 271 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 96/298 (32%), Positives = 144/298 (48%), Gaps = 40/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T+ DI +P A G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRKIAPLVTGRTIVDIRHLSPK---KYPDTGLAH--GRTVLEPQRRGKYL 55 Query: 61 L------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + + +IVHLGM+G F +E H +T+ L + + Sbjct: 56 ILPLAQGPDAAPDRELIVHLGMTGGFRLEE---------GPHTRLTLQLDSG------EL 100 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +NDPRRFG + +V+ P L +GPEP ++SF K +K LL+Q Sbjct: 101 HFNDPRRFGRVRVVQAGDYAALPTLAAMGPEPLEDSFELEAFAQ-AAAKAGAVKPWLLSQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + VAG+GNIY EALWRA++ P + + +L +++V+ +A++ GGS Sbjct: 160 RPVAGVGNIYADEALWRARIHPAQ--------RHLSAEQAARLHAAVREVMREAVELGGS 211 Query: 235 SL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 SL +Y DG G FQ + YG+ G+PC CG I + V R T +C CQ Sbjct: 212 SLGNGVSNYRQHDGDWGGFQLQHAAYGRGGQPC-PRCGTTIEKTVLGQRGTHFCPQCQ 268 >gi|124025133|ref|YP_001014249.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus str. NATL1A] gi|166198728|sp|A2C0H4|FPG_PROM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123960201|gb|ABM74984.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. NATL1A] Length = 282 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + I + R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIDNVKNSYLGNWERRGK 60 Query: 59 YLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL+ E ++VHL M+G F + K + +H V Sbjct: 61 YLIGSLLTKEKFSKGFLVVHLRMTGQFKL----LEKEVLACKHTRVRFFEERGR-----E 111 Query: 114 VIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M V +S ++ LGPEP + FN+ YL KK ++K+AL Sbjct: 112 LRFIDIRNFGQMWHVPSSRSVPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ VAG+GNIY E L+ A ++P ++R+L N L +L + K+L +I Sbjct: 172 LDQRTVAGVGNIYADETLFDAGINPKTESRNLKSNE------LKRLCNSLIKILNISIGE 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 226 GGTTFSDFRDLEGGNGNYGGQALVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|289672463|ref|ZP_06493353.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 131/261 (50%), Gaps = 19/261 (7%) Query: 29 HRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA 88 LR+ P G++I+ V RRAKYLLI ++I HLGMSG+ + Sbjct: 2 RDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIRA-EVGTLISHLGMSGNLRLVEAGLP 60 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD 148 H HV I L + + Y DPRRFG M + + + L LGPEP Sbjct: 61 ALK----HEHVDIELESG-----LALRYTDPRRFGAMLW--SLDPHNHELLIRLGPEPLT 109 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 + F+ L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 110 DLFDGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRARY 169 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG Sbjct: 170 L------KLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCG 222 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 +R + R++ YC CQ+ Sbjct: 223 TTLREVKLGQRASVYCPKCQR 243 >gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|81679878|sp|Q5YS09|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 294 Score = 165 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 32/298 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + V + + H +++R +A G+++ RR Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60 Query: 58 KYLLIELEGNLSII---------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL + + + VHLGMSG +++ + +H H+ +L + + Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAP----VEKHAHIRAALDDGS- 115 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY---QYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + D R FG L + P+ + +P D F+A + KNS Sbjct: 116 ----ELRFVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIRAKNS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +V+GIGNIY E+LWRA ++ R L + + +L+ E++ V+ Sbjct: 172 EIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTR------PAVRRLLAEVRAVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++A+ AGG+S YV+++G GYF+ A +VYG+ EPC CG I R RS++ Sbjct: 226 LEALAAGGTSFDALYVNVNGQSGYFERALAVYGRQDEPC-RRCGAPIVREKFMNRSSY 282 >gi|260219875|emb|CBA26844.1| Formamidopyrimidine-DNA glycosylase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 271 Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 144/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + T+ + + + LR+ A G ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRITGATIQGVRMGKP-LRWPLQCE-PAQLAGLRVRGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L L ++VHLGMSGS I + H+H + T + +DPR Sbjct: 59 LIDLSDGL-LLVHLGMSGSVIFDRHLPP----AGVHDHFDMVTDLGT------LRLHDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + S L LG EP + F+ ++ + +K LL ++V G Sbjct: 108 RFGAVVFAAGESDPVAQKLLGHLGVEPLGDGFDPAAFLAGLRQRKAPIKQVLLAGEVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P S+ K + KL ++ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTSPANSIS------KPRVAKLHAAVKDVLSRAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ +VYG+ G PC C +R I Q RST+YC CQK Sbjct: 222 SNANGESGYFQLEANVYGREGAPC-RVCATPVRAIRQGQRSTYYCMVCQK 270 >gi|330813300|ref|YP_004357539.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486395|gb|AEA80800.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] Length = 286 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 20/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI ++ L +++ +TDI + +LR+ +F KKI ++RR+KYL Sbjct: 1 MPELPEVEITKKTLQKYVQDQYITDIKIKNYSLRYKINKNFRKNVVKKKIKKITRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS-------CAKPIKNPQHNHVTISLTNNTNTKKYR 113 + L I+HLGM+G ++ + + +HNH+ KKY Sbjct: 61 IFHLSDKTFFIIHLGMTGRILVGKNNTLLDTSFYSSNSSINKHNHLYFFF------KKYV 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 +IYND RRFGF+ + L LG EP S N Y + ++KN L++ Sbjct: 115 MIYNDTRRFGFIKFYTEQELLRSSHLIHLGVEPLSKSLNFSYFKERIKGFKKSIKNTLMD 174 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + G+GNIYV EAL+ +K+SP R + + N I+K+L +I GG Sbjct: 175 QSFICGLGNIYVNEALFISKISPGRMSFKIKDNEIILLIK------SIKKILKKSIVFGG 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 S+++D+ + +G G FQN F VYGK G+ C +C +I+R V + R+TF+CT CQ Sbjct: 229 STIKDFHNSEGKSGQFQNFFKVYGKEGQGCPRSSCKGIIQRSVISSRATFFCTKCQ 284 >gi|254423013|ref|ZP_05036731.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] gi|196190502|gb|EDX85466.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] Length = 285 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 95/297 (31%), Positives = 131/297 (44%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V N V ++ L R + F A +I RR K Sbjct: 1 MPELPEVETVRRGLNRVSLNQPVRGGEVRLARTIAYPELADAFLEAMSSVQITSWHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSC----AKPIKNPQHNHVTISLTNNTNTKKYRV 114 YLL L + + + T K H V + + + Sbjct: 61 YLLATLCQRRRLELEPAGWLGVHLRMTGQLLWVPKNEPMQTHCRVRLFFDGDN-----EL 115 Query: 115 IYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 Y D R FG + V L+ LGPEP F+ YL + +KNALL Sbjct: 116 RYVDQRTFGRLWWVPPDRAIDSVMTGLQKLGPEPFSEEFSIDYLASALKGRQRPIKNALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAGIGNIY EAL+ + + P L + + KL Q I+ VL +I++G Sbjct: 176 DQRLVAGIGNIYADEALFLSGIRPTVVCDRLTRR------KITKLHQAIRDVLTTSIESG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G++ D+ + G+ G + VY + GEPC CG I RI AGRS YC CQ+ Sbjct: 230 GTTFSDFRDVHGTNGNYGGVAWVYDREGEPC-RKCGVGILRIKLAGRSAHYCPKCQR 285 >gi|169348424|ref|ZP_02866362.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] gi|169293893|gb|EDS76026.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] Length = 270 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + + D F + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDDIEEFKNKVCNQVINDIDRIGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ + + HL M G + + H+H+ +L + ++ YND R Sbjct: 61 IFKLDDV-AFVSHLRMEGKYHYVNRDEPLNK----HDHIVFNLDDGK-----QLRYNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV PL LGPEP + L + HK N +K+ALL+Q I+AGI Sbjct: 111 KFGRMKLVSLDNYANELPLSKLGPEPFYA--DEKKLYEKLHKCNLPIKHALLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + L P L K + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFAMGLDPYTPASKLT------KKSVKELIEVASSILNEAIKQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ V+ + + C S CG I + GR T+YC CQK Sbjct: 222 SANGIDGLFQVKLKVHLQ--KKC-SICGGEITKEAIKGRGTYYCKKCQK 267 >gi|159902905|ref|YP_001550249.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9211] gi|238687193|sp|A9BDY5|FPG_PROM4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159888081|gb|ABX08295.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9211] Length = 286 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 29/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L +KN + ++ + + + F + SRR K Sbjct: 1 MPELPEVETVRKGLEKRLKNFYIDNVEVLSERSIASNGGSNVFIFNLKDLVFGRWSRRGK 60 Query: 59 YLL---------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 YL+ IE + +++VHL M+G F + A H V N Sbjct: 61 YLIASLCKESDLIEEIPSGTLVVHLRMTGYFEWHQNTKA----PCTHTRVRFW-----NK 111 Query: 110 KKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 K + + D R FG M + + L+ LGPEP FN YL + + ++ Sbjct: 112 KGSEIRFIDIRNFGQMWWIPPNKLPSEVINGLKNLGPEPFSKDFNPEYLKYCLKGRKRSI 171 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K++LL+Q I+AG+GNIY E+L+ A ++PI+ + L L KL + + ++L Sbjct: 172 KSSLLDQSILAGVGNIYADESLFEAGITPIKASGDLNGCE------LKKLCKSLTRILKA 225 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I GG++ D+ ++G G + VY + +PC CG +I + AGRST +C C Sbjct: 226 SIGKGGTTFSDFRDLEGLNGTYGGYAWVYRRNQKPC-RKCGTLIEKTKVAGRSTHWCPNC 284 Query: 288 Q 288 Q Sbjct: 285 Q 285 >gi|325107647|ref|YP_004268715.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] gi|324967915|gb|ADY58693.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] Length = 279 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 127/295 (43%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----HRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L + T G+ I V RR Sbjct: 1 MPELPEVETMVRGIRQAVAGTRLAAVDLCPCPRKPITLTPGIEELRDRTVGQTITAVERR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK +++ LE ++ M+G ++ P +H+ I K+ + + Sbjct: 61 AKRVVLRLESEDCYVIEPRMTGLMLLAD--------PPTIDHLRIHWQLRDGRKRRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L + L+ LGP+ D + +K ALL+QK+ Sbjct: 113 WDRRGLGTVRLYSPTEYEAALGLQKLGPDALD--MTPALWKDALQRTARPIKVALLDQKL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L +LSP +L + KL + +L AI GS+L Sbjct: 171 VAGIGNLYASEILHAIRLSPETPANTLTAGQ------IRKLHRSCLAILELAIQYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VYGKTGE C I RIVQA RSTFYC CQK Sbjct: 225 GDGTYRNALNKDGSYQNEHRVYGKTGETCPRCQKHSIERIVQAQRSTFYCPRCQK 279 >gi|15805520|ref|NP_294216.1| formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] gi|6458179|gb|AAF10070.1|AE001908_5 formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] Length = 291 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +++ T+ I +H R+ + G+++ ++RR KYL Sbjct: 12 MPELPEVETTRRKIEPLLRGKTIERI-VHDAPHRYRN----TERAHGRQVRGLTRRGKYL 66 Query: 61 LI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ + +L +IVHLGM+G F +E H VT L + Sbjct: 67 LLHLAAADAAEDEPHDLELIVHLGMTGGFRLEE---------GPHTRVTFELGSGE---- 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG + V P L +GPEP + F + +K L Sbjct: 114 -KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFVALAA-RCGPVKPWL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A+L P + D +L + I++V+ A+D Sbjct: 172 LSQKPVSGVGNIYADESLWHARLHPAQT--------RLNADEAGRLYRAIREVMAAAVDK 223 Query: 232 GGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C C Sbjct: 224 GGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPCD-RCGTPIEKIVLGQRGTHFCPVC 282 Query: 288 Q 288 Q Sbjct: 283 Q 283 >gi|46446526|ref|YP_007891.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] gi|81697648|sp|Q6MCT3|FPG_PARUW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46400167|emb|CAF23616.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] Length = 276 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 129/295 (43%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV I ++L + + + L P F +G+ I +V RR K Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWPKTLAVPTPEIFCQQVQGQSIQNVDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++ +L + +IVHL M+G F + + + + N ++ ++D Sbjct: 61 YIIFQLSNQMFLIVHLRMTGRFQFVTSQTPASP----YVRIQFNFENGD-----QLRFHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV + + ++ + LK+ LL+Q + Sbjct: 112 TRKFGRWYLVSDVEEIIGHLGPEPLLSSFTFELFEDMMKNR----KTLLKSLLLDQSFIV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AKL P+ + L L I+ VL I A G++L Sbjct: 168 GLGNIYVDEALWEAKLHPLIPANQINLK------HLKILYHSIKYVLEKGIQARGTTLGP 221 Query: 239 ----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +DGS G Q +V+ KTG PC CG +I +++ A RST C CQK Sbjct: 222 GRTHYYRLDGSKGEHQTLLNVFRKTGHPC-PRCGHLIEKLIVAQRSTHICPICQK 275 >gi|193216889|ref|YP_002000131.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] gi|193002212|gb|ACF07427.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] Length = 275 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+++ L + N ++ + ++ L R P F G+ I +++ R K+ Sbjct: 1 MPELPEVKVVISALKKHILNKKISALEIYHAKLFREHKPEVFIKKLAGRTIKNITNRGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I L+ +L ++ HL M G + + + H + + + Y D Sbjct: 61 IIIFLDDDLILLSHLRMEGKYRYYEANNLPLAND--HLIAKFIFEDQS-----ELHYLDS 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L T + PL + EP + N L ++ + +K LL+Q++VAG Sbjct: 114 RRFGTFHLRTTEDYNKILPLSKIAAEP--DKINVELLWNKIKSSTTPIKTKLLDQELVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A+++P + + L K+I+ K++ D+ + GG++L Y Sbjct: 172 IGNIYADEALYCAQVNPSTLAKDVSLK------TLDKIIKCAAKIMKDSFEKGGTTLFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +QN V+G C C I +I R T++C CQ Sbjct: 226 ESLNKQEGQYQNFLKVHGDRIRFC-PTCKSKIIKIKVNNRGTYFCPKCQ 273 >gi|330980019|gb|EGH78285.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 240 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 19/259 (7%) Query: 31 KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 LR+ P G++I+ V RRAKYLLI+ ++I HLGMSG+ + Sbjct: 1 SRLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIQA-EVGTLISHLGMSGNLRLVEAGLPAL 59 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 H HV I L + + Y DPRRFG M + + + L LGPEP + Sbjct: 60 K----HEHVDIELESG-----LALRYTDPRRFGAMLW--SLDPHNHELLIRLGPEPLTDL 108 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 109 FDGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRARYL- 167 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG Sbjct: 168 -----KLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTT 221 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + R++ YC CQ+ Sbjct: 222 LREVKLGQRASVYCPKCQR 240 >gi|254412410|ref|ZP_05026184.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] gi|196180720|gb|EDX75710.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] Length = 282 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IR L + + D+ L R F + +I D RR K Sbjct: 1 MPELPEVETIRLGLKQITCTQAIQGGDVLLPRTIAYPVSVAAFWQGLKQTRITDWHRRGK 60 Query: 59 YLLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + VHL MSG + + H V + Sbjct: 61 YLLAQLNRSEEGDAGWLGVHLRMSGQLLWIQQTEPLQK----HTRVRLFFPQGQ-----E 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M V + L+ LGPEP ++F+ YLT + K ++K A+ Sbjct: 112 LRFVDQRTFGRMWWVPPGEECDSIITGLQNLGPEPFSDAFSPEYLTQKLKKSQRSIKTAI 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY EAL+ + + P L + + +L Q I +VL I+A Sbjct: 172 LDQSLVAGVGNIYADEALFVSGIHPQTVCARLSVDQ------VERLHQGIIQVLKAGIEA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ ++++ G G + VYG+TG+PC C I RI +GRS+ +C CQ Sbjct: 226 GGTTFSSFLNVQGVNGNYSGVAWVYGRTGQPC-RVCETSIERIKLSGRSSHFCPRCQ 281 >gi|24211712|sp|Q9RX22|FPG_DEIRA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 280 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +++ T+ I +H R+ + G+++ ++RR KYL Sbjct: 1 MPELPEVETTRRKIEPLLRGKTIERI-VHDAPHRYRN----TERAHGRQVRGLTRRGKYL 55 Query: 61 LI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ + +L +IVHLGM+G F +E H VT L + Sbjct: 56 LLHLAAADAAEDEPHDLELIVHLGMTGGFRLEE---------GPHTRVTFELGSGE---- 102 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG + V P L +GPEP + F + +K L Sbjct: 103 -KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFVALAA-RCGPVKPWL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A+L P + D +L + I++V+ A+D Sbjct: 161 LSQKPVSGVGNIYADESLWHARLHPAQT--------RLNADEAGRLYRAIREVMAAAVDK 212 Query: 232 GGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C C Sbjct: 213 GGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPCD-RCGTPIEKIVLGQRGTHFCPVC 271 Query: 288 Q 288 Q Sbjct: 272 Q 272 >gi|93117333|gb|ABE99584.1| fpg [Neisseria meningitidis] Length = 249 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 140/263 (53%), Gaps = 14/263 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 1 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQT-GILL 59 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 60 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-G 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 114 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 AGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 227 Query: 252 AFSVYGKTGEPCLSNCGQMIRRI 274 ++VYG+ +PC CG ++ + Sbjct: 228 EYTVYGRHNQPC-PQCGGLVVKE 249 >gi|124023869|ref|YP_001018176.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9303] gi|123964155|gb|ABM78911.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9303] Length = 291 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 132/307 (42%), Gaps = 34/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R+ F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLIDFQIDQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELEGN--------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L + VHL M+G F H V I Sbjct: 61 YLMASLHHDFAQPSADSEPDPDGGWWGVHLRMTGQFQWHEA----ISSPCPHTRVRIW-- 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHK 162 N K + + D R FG M V + L+ LGPEP ++FN+ YL+ + Sbjct: 115 ---NKKDEELRFVDTRSFGQMWWVPPGNAPETIITGLQKLGPEPFSSAFNSSYLSKRLKG 171 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K+ALL+Q IVAG GNIY E+L+ A++ P + K L +L + Sbjct: 172 SKRPIKSALLDQSIVAGAGNIYTDESLFAARILPHTPSGQ------LKKVELERLCDCLT 225 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ D+ ++G G + VY + G+ C C IRR GR T Sbjct: 226 EVLRVSIGAGGTTFSDFRDLEGMNGNYGGQAWVYRRGGQAC-RICSTPIRRESLCGRGTH 284 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 285 WCPNCQR 291 >gi|269957059|ref|YP_003326848.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269305740|gb|ACZ31290.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 339 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 135/340 (39%), Gaps = 63/340 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V ++ + R ++R P F++ G + +RR Sbjct: 1 MPELPEVETVRDGLARHVVGARVREVEVLRDYSVRRQDGGPSAFASLIEGATLTAAARRG 60 Query: 58 KYLLIE------------------------------LEGNLSIIVHLGMSGSFIIEHTSC 87 K+L + +++ HLGMSG ++ Sbjct: 61 KFLWLPLAAAPVVEPVETTPLDPAGVVSTGSTTDAGSTTRTALLAHLGMSGQLLVRDGRD 120 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE------------TSLKYQ 135 H V + LT T + + D R FG + +V + + Sbjct: 121 P---WAHPHLRVRLHLT-GAPTGATALDFVDQRTFGHLAVVGLVPTPDGAPGGLGTDEPA 176 Query: 136 YPPLRTLGPEPADNSFNAIYL------THQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 P + A ++ + +K ALL+Q +V+GIGNIY EAL Sbjct: 177 VPGPVAHIARDLLDPELAPGTPGRAAVIAAVRRRRTGIKRALLDQTLVSGIGNIYADEAL 236 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGY 248 WRA++ R T + + +++ + V+ +A+ GG+S YV+++G GY Sbjct: 237 WRARVHYARAT------DVLRPVEVARVLDAAEDVMREALAVGGTSFDTLYVNVNGESGY 290 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F + YG+ GEPC CG I R RS +C CQ Sbjct: 291 FARGLAAYGRAGEPC-PRCGTPIVRDTFMNRSAHWCPRCQ 329 >gi|93117329|gb|ABE99582.1| fpg [Neisseria meningitidis H44/76] Length = 250 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 140/264 (53%), Gaps = 14/264 (5%) Query: 14 LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVH 73 + ++ TV + L + LR+ G++++ RRAKYLLI + +++H Sbjct: 1 IAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQT-GVLLIH 59 Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 LGMSGS I S + + +H+HV I ++ T + Y DPR+FG + E ++ Sbjct: 60 LGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-GIE 113 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 +P L LGPEP +F A YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAG 173 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ + Sbjct: 174 ISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEY 227 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQA 277 +VYG+ +PC CG ++ + Sbjct: 228 TVYGRHNQPC-PRCGGLVVKETLG 250 >gi|260907270|ref|ZP_05915592.1| Formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 307 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 140/315 (44%), Gaps = 39/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---------HHFSAATRGKKII 51 MPELPEVE +R + T+T + + F AA G++II Sbjct: 1 MPELPEVESVRVGVHEWTAGTTITGAEVIDPRILGTTSQRRIDASAVDGFIAAVTGRRII 60 Query: 52 DVSRRAKYLLI-------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 RR K++ + LS++VHLGMSG + + H H Sbjct: 61 AAERRGKFMWLTLGEDLGAGPAAEPAAPELSLLVHLGMSGQLRVHDAADE------IHRH 114 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 L ++ ++ + D R FG LV + + +P + +F Sbjct: 115 TRAILRLERGSESLQLRFIDQRIFGHLGVQPLVHAYGRLVPASANHIAADPLEPAFEPGL 174 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 Q +K + +K+ALL+Q +V+GIGNIY EAL+RA + P+ T K L Sbjct: 175 ALEQLARKRTVVKSALLDQSLVSGIGNIYADEALFRAGIHPLAIPAR------TRKSRLA 228 Query: 216 KLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 ++ +V+ DA+ GG+S YV+++G GYF A VYG+ G+ C+ CG I ++ Sbjct: 229 AVLDSATRVMSDALAVGGTSFDALYVNVNGESGYFDRALLVYGRGGQECV-RCGTEIEKM 287 Query: 275 VQAGRSTFYCTYCQK 289 GR + +C CQK Sbjct: 288 TIGGRGSHFCPNCQK 302 >gi|221142561|ref|ZP_03567054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751515|gb|ADL65692.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 290 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGHT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|238810071|dbj|BAH69861.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 274 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 2 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 62 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + L ++ KN +K LL+Q V+G Sbjct: 113 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKE--LFNKIKNKNIPIKQLLLDQSFVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 171 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 225 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 274 >gi|319777154|ref|YP_004136805.1| DNA glycosylase [Mycoplasma fermentans M64] gi|6537224|gb|AAF15568.1|AF179376_3 foramidopyrimidine DNA gycosylase [Mycoplasma fermentans] gi|318038229|gb|ADV34428.1| DNA glycosylase [Mycoplasma fermentans M64] Length = 273 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + L ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKE--LFNKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 273 >gi|291320264|ref|YP_003515525.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] gi|290752596|emb|CBH40568.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] Length = 279 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N T+T++ + L + P+ F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKSNILNSTITNVIVKLDKLIKNATPNEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + K +H+++ L N + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYF----TDISINKTRKHDYIIFELDN-----QMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+SP KT P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKISPWTKTNK------IPYEKFKEMLSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ +T PC + C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRTNMPC-NKCNALIQQEFIAQRMTYYCPICQK 272 >gi|121607944|ref|YP_995751.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] gi|121552584|gb|ABM56733.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] Length = 273 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + + L + LR+ + G++++ + RR KYL Sbjct: 1 MPELPEVEVTRRSFADAIAGARIQAVALGKP-LRWPLGCDPMS-LVGQQVLGLRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L ++ LGMSGS H H+H + T + +DPR Sbjct: 59 LADTSGGLLLLH-LGMSGSLRFSHGLPP----AGVHDHFDLVTDRGT------LRLHDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP +SF+ K +K LL ++V G Sbjct: 108 RFGAVVYAPDEQAPVALKLLGALGMEPLSDSFSLATFQSGLKKSRMPIKPLLLAGRLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ A + P + + +L + I+ VL A+ GGS+LR++ Sbjct: 168 VGNIYASEVLFLAGIRPTAVASRVGAER------VRRLHEAIRTVLTRAVQMGGSTLRNF 221 Query: 240 VHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ+ VYG+ G PC CG IR + Q RS+++C CQ+ Sbjct: 222 SNADGMAGHFQSSAHIHVYGRDGAPCHH-CGSAIRLLRQGQRSSYFCPLCQR 272 >gi|94984550|ref|YP_603914.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] gi|94554831|gb|ABF44745.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] Length = 289 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 149/301 (49%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I H R+ +A G++I +SRR KYL Sbjct: 1 MPELPEVETTRRKIEPLLAGRIILNI-AHNAPQRYRD----TALAHGRRISGLSRRGKYL 55 Query: 61 LIE---------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +L +IVHLGM+G F +E H VT++ Sbjct: 56 ILHLVPPEARSDEPHDLELIVHLGMTGGFRLEE---------GPHTRVTLTTDAGQ---- 102 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + +NDPRRFG M +V P L +GPEP + F + + L Sbjct: 103 --LYFNDPRRFGKMAVVPAGAYGGMPTLAAMGPEPLSDDFREEDFVRRAAWAGAVKPW-L 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LWRA++ P + +L + I++V+ +A+ A Sbjct: 160 LSQKPVSGVGNIYADESLWRARIHPAQT--------NLSAPEAGRLYRAIREVMAEAVAA 211 Query: 232 GGSSLRD----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL D Y DG++G+FQ +VYG+TG+ C CG I+++V A R T +C C Sbjct: 212 GGSSLGDGPGNYRQHDGAVGFFQGQHAVYGRTGQLC-PRCGTPIQKMVLAQRGTHFCPAC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|312830067|emb|CBX34909.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 290 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVYYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYR---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|297156898|gb|ADI06610.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 312 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ + +R F+A +G++ RR Sbjct: 1 MPELPEVEVVRRGLERWISGRTVAEVQVLHPRAVRRHLGGGEDFAARLKGRRAGVARRRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + + S++ HLGMSG +++ A + +H + + ++ T+ V Sbjct: 61 KYLWLPLEDADESVLAHLGMSGQLLVQPHGAA----DEKHLRIRVRFNDSIGTELRFVDQ 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + VE + + + +P D +F+ ++ + +K ALL+Q + Sbjct: 117 RTFGGLSLHETVEGAADGLPAAIAHIARDPLDPAFDEAAFHTALRRRRTTVKRALLDQSL 176 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ ++ V+ A+ GG+S Sbjct: 177 ISGVGNIYADEALWRARLHYDRPTATLTRPRSV------ELLDHVRDVMNAALAVGGTSF 230 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ + YG+ EPC C +RR RS+++C CQ Sbjct: 231 DSLYVNVNGESGYFERSLDAYGRENEPC-RRCATPMRRRPWMNRSSYFCPRCQ 282 >gi|315125571|ref|YP_004067574.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] gi|315014084|gb|ADT67422.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] Length = 258 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 134/277 (48%), Gaps = 20/277 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + N VT + +H ++R+ P G + + RRAKYLL+E + I+ Sbjct: 2 GITPHVLNQVVTKVNIHNASMRWPVPDEVYQ-LEGLVVSSIERRAKYLLLE-CELGAAIL 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSG+ + + + H+HV L NN + NDPRRFG + + Sbjct: 60 HLGMSGNLRVVNANEPLKK----HDHVEFILANNK-----ALRLNDPRRFG--CCLWQAP 108 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 ++ L LGPEP + F A + Q K +K ++N +V G+GNIY E+L++A Sbjct: 109 NEEHKLLAKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMNNAVVVGVGNIYANESLFKA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P ++ + LI I+ L AI GG++L+D+ DG GYF Sbjct: 169 GIDPRKEAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQ 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC+ NC + I RST +C CQK Sbjct: 223 LLVYGRKGQPCV-NCDTALTEIRLGQRSTVFCEVCQK 258 >gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 295 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 19/300 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+++L+ + ++ + ++ L+ P F + +I DV RR KY Sbjct: 1 MPELPEVETIKKSLLSDLTGDRISRVEIYFPGMLQNMSPEDFKESVISNQIKDVKRRGKY 60 Query: 60 LLIELEGNLSII-------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 LLI + N + +HL M+G I+++ K + + + + Sbjct: 61 LLIYVSCNGKMKDQVKVIIIHLRMTGRLILKNNEVEKSHNHLDDEEIIQEYRHLRCLFQL 120 Query: 113 ----RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + ++D R+FG M LV ++ + L LGPEP F+ K +K Sbjct: 121 QSGITLEFHDQRKFGTMALVNQGEEFYWKGLANLGPEPLSEEFDYEDFYKGVKKSKKPIK 180 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+QK+VAGIGNIY E L+ + + P RK L + + L + I ++L Sbjct: 181 GILLDQKLVAGIGNIYADEVLFASGIHPARKGEELTEQE------VGSLYKTIIQILELG 234 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G++ DY +G+ G FQ+ V+ + E CL C + +++ A R T+YC CQ Sbjct: 235 IKYRGTTFSDYRDSEGNKGNFQDLLKVFNRNKEECL-ICRREVQKTKVANRGTYYCPNCQ 293 >gi|258424105|ref|ZP_05686987.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] gi|257845726|gb|EEV69758.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] Length = 290 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKTQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG M V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEMRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|21283361|ref|NP_646449.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MW2] gi|49486515|ref|YP_043736.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650560|ref|YP_186573.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87161684|ref|YP_494330.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195496|ref|YP_500300.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221794|ref|YP_001332616.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509903|ref|YP_001575562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253732340|ref|ZP_04866505.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258451797|ref|ZP_05699819.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|262048660|ref|ZP_06021543.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|262052260|ref|ZP_06024465.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|282920229|ref|ZP_06327954.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|284024737|ref|ZP_06379135.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 132] gi|294848710|ref|ZP_06789456.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|297207598|ref|ZP_06924033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911680|ref|ZP_07129124.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304380720|ref|ZP_07363389.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204801|dbj|BAB95497.1| MW1632 [Staphylococcus aureus subsp. aureus MW2] gi|49244958|emb|CAG43419.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284746|gb|AAW36840.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87127658|gb|ABD22172.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203054|gb|ABD30864.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374594|dbj|BAF67854.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368712|gb|ABX29683.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723862|gb|EES92591.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257860509|gb|EEV83335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|259159861|gb|EEW44900.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|259163307|gb|EEW47866.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|269941169|emb|CBI49556.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus TW20] gi|282594577|gb|EFB99562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|294824736|gb|EFG41159.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|296887615|gb|EFH26513.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887101|gb|EFK82302.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304340719|gb|EFM06650.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198614|gb|EFU28942.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus CGS01] gi|320140433|gb|EFW32287.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143971|gb|EFW35740.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314361|gb|AEB88774.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus T0131] gi|329728368|gb|EGG64805.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21189] gi|329733282|gb|EGG69619.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|73749072|ref|YP_308311.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|147669837|ref|YP_001214655.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. BAV1] gi|289433049|ref|YP_003462922.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] gi|73660788|emb|CAI83395.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|146270785|gb|ABQ17777.1| DNA-(apurinic or apyrimidinic site) lyase [Dehalococcoides sp. BAV1] gi|288946769|gb|ADC74466.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] Length = 270 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 132/288 (45%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + + + F+A G + +SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIRMEALWAKTLCPPEADFNALASGTCVTGLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L L I VHL MSG + P+ L N +V + D R Sbjct: 61 IISLSSGLFISVHLKMSGGLTAIRAENGQ---APRFTRAIFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + L+ GPEP + +F A H+ + +K LL+QK++AG+ Sbjct: 113 KFGRITLLAGLDSVLEKL----GPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y EAL++A L+P+R SL + +L IQ VL AI G+S+ Y Sbjct: 169 GNMYADEALFKACLNPLRSAESLSMAE------VERLHSAIQSVLHKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ ++C CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGESC-PVCGAPITRQLIRQRACYFCPRCQ 269 >gi|167754595|ref|ZP_02426722.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|237733769|ref|ZP_04564250.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|167705427|gb|EDS20006.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|229383107|gb|EEO33198.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 270 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + N+ D F A + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKKIISIDVLYPNIIEDDVEEFIEACTNQTINDIDRAGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ + + HL M G + H+H+ +L +N ++ YND R Sbjct: 61 IFKLDDI-AFVSHLRMEGKYHYVEHDEPLNK----HDHIIFNLDDNK-----QLRYNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV PL LGPEP + + + HK N +K+A+L+Q I+AGI Sbjct: 111 KFGRMKLVSLDNYMNEIPLCKLGPEPFNA--KLEDIYPKLHKSNLPIKHAILDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + L+P L K + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFAMGLNPNTPACKLT------KKSVQELIEVSSAILNEAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ + + + C CG I ++ GR T+YC +CQK Sbjct: 222 SANGIDGLFQVKLKAHLQ--KVC-PICGGEITKVAIKGRGTYYCKHCQK 267 >gi|297590777|ref|ZP_06949415.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] gi|297575663|gb|EFH94379.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] Length = 290 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTRQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|221633868|ref|YP_002523094.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] gi|254789452|sp|B9L1Z5|FPG_THERP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221156330|gb|ACM05457.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] Length = 289 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 24/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L V+ V H +++ D F+ R +I+ + RR K Sbjct: 1 MPELPEVETIRRTLAPVLIGALVIGALRGEHPEDILLDPWPVFARRVRRHRIVALERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN--------NTNTK 110 YL E +++HLGM+G + H + A +H H+ + L + + Sbjct: 61 YLAARFEDGDRLVIHLGMTGELRLSHPATA----PGKHCHLALVLRSLRPLPPSLVDQRQ 116 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++ + Y D RRFG + L++ + LGPEP D + + L + ++ + +K A Sbjct: 117 RFLLRYLDIRRFGRIALLDQAGWET--FTARLGPEPLDPTLDPRALWSRLRERRTAIKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY EAL++A+L P R+ ++L + + +L+ ++ VL AI+ Sbjct: 175 LLDQALLAGIGNIYADEALFQARLHPARRCQTLSLDE------VERLLVALRTVLSAAIE 228 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+++RDY G G FQ+ VYGK G PC CG + RI AGRS+ +C CQ Sbjct: 229 NAGTTIRDYRDGQGRAGSFQSRLQVYGKPAGTPC-PRCGTGLARIRIAGRSSVFCPRCQ 286 >gi|57233872|ref|YP_182098.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] gi|57224320|gb|AAW39377.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] Length = 270 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 86/288 (29%), Positives = 129/288 (44%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + +T + F+ G ++ +SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRMEALWAKTLCPPETEFNKLVSGLQVTGLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L G L I VHL MSG + P+ L N +V + D R Sbjct: 61 IISLSGGLFISVHLKMSGGLTAVKAETEQF---PRFTRAVFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ + + + +K LL+QK++AG+ Sbjct: 113 KFGRINLLTSLDTILEKLGPEPLEGDFTPEVLG----KRLSGRKGPIKAVLLDQKVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y EAL++A L+P+R SL + + KL IQ VL AI G+S+ Y Sbjct: 169 GNMYADEALFKACLNPLRPADSLSKAE------VTKLHSAIQSVLHKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ +YC +CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGEVC-PECGAPINRQLIRQRACYYCPHCQ 269 >gi|33862459|ref|NP_894019.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9313] gi|39931227|sp|Q7V8Y5|FPG_PROMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33640572|emb|CAE20361.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9313] Length = 291 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 131/307 (42%), Gaps = 34/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R+ F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFQIGQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELEGN--------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L VHL M+G F H V I Sbjct: 61 YLMASLHHEIAQSSADSEPDPDGGWWGVHLRMTGQFQWHEA----ISSPCPHTRVRIW-- 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHK 162 N K + + D R FG M V + L+ LGPEP ++FN+ YL+ + Sbjct: 115 ---NKKNEELRFVDTRSFGQMWWVPPGNAPETIITGLQKLGPEPFSSAFNSSYLSKRLKG 171 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K+ALL+Q IVAG GNIY E+L+ A++ P + K L +L + Sbjct: 172 SKRPIKSALLDQSIVAGAGNIYTDESLFAARIRPHTPSGQ------LKKVELERLCNCLT 225 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ D+ ++G G + VY + G+ C C IRR GR T Sbjct: 226 EVLRVSIGAGGTTFSDFRDLEGINGNYGGQAWVYRRGGQAC-RICSTPIRRESLCGRGTH 284 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 285 WCPNCQR 291 >gi|15924679|ref|NP_372213.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50] gi|15927267|ref|NP_374800.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus N315] gi|49483931|ref|YP_041155.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|148268169|ref|YP_001247112.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH9] gi|150394236|ref|YP_001316911.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156980006|ref|YP_001442265.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu3] gi|255006473|ref|ZP_05145074.2| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425804|ref|ZP_05602228.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428470|ref|ZP_05604868.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431104|ref|ZP_05607481.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433787|ref|ZP_05610145.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257436703|ref|ZP_05612747.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257794074|ref|ZP_05643053.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|258415778|ref|ZP_05682049.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|258421985|ref|ZP_05684905.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|258438257|ref|ZP_05689541.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|258443715|ref|ZP_05692054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|258445926|ref|ZP_05694102.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|258448393|ref|ZP_05696510.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|258454126|ref|ZP_05702097.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|269203307|ref|YP_003282576.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282893184|ref|ZP_06301418.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|282904260|ref|ZP_06312148.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282906085|ref|ZP_06313940.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909000|ref|ZP_06316818.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911316|ref|ZP_06319118.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914485|ref|ZP_06322271.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282916949|ref|ZP_06324707.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282919454|ref|ZP_06327189.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282924831|ref|ZP_06332497.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282927819|ref|ZP_06335430.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|283770753|ref|ZP_06343645.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283958440|ref|ZP_06375891.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503563|ref|ZP_06667410.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|293510578|ref|ZP_06669283.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|293537120|ref|ZP_06671800.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|295405999|ref|ZP_06815807.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295428260|ref|ZP_06820889.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274884|ref|ZP_06857391.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MR1] gi|297245075|ref|ZP_06928952.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|13701485|dbj|BAB42779.1| SA1512 [Staphylococcus aureus subsp. aureus N315] gi|14247461|dbj|BAB57851.1| similar to formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus Mu50] gi|49242060|emb|CAG40759.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|147741238|gb|ABQ49536.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus JH9] gi|149946688|gb|ABR52624.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156722141|dbj|BAF78558.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257271498|gb|EEV03644.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275311|gb|EEV06798.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278052|gb|EEV08700.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281880|gb|EEV12017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257284054|gb|EEV14177.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257788046|gb|EEV26386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|257839371|gb|EEV63844.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|257842029|gb|EEV66458.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|257848301|gb|EEV72292.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|257851121|gb|EEV75064.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|257855168|gb|EEV78107.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|257858361|gb|EEV81246.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|257863578|gb|EEV86335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|262075597|gb|ACY11570.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282313197|gb|EFB43593.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282317264|gb|EFB47638.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282319436|gb|EFB49788.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282321666|gb|EFB51991.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282325011|gb|EFB55321.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327264|gb|EFB57559.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331377|gb|EFB60891.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282590329|gb|EFB95408.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|282595878|gb|EFC00842.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282764502|gb|EFC04628.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|283460900|gb|EFC07990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283790589|gb|EFC29406.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817372|gb|ADC37859.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus 04-02981] gi|290919965|gb|EFD97033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|291095229|gb|EFE25494.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|291466469|gb|EFF08990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|294968996|gb|EFG45017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295127660|gb|EFG57297.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297178155|gb|EFH37403.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|298694959|gb|ADI98181.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus subsp. aureus ED133] gi|312437853|gb|ADQ76924.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH60] gi|315130677|gb|EFT86663.1| hypothetical protein CGSSa03_10550 [Staphylococcus aureus subsp. aureus CGS03] gi|315195593|gb|EFU25980.1| hypothetical protein CGSSa00_08000 [Staphylococcus aureus subsp. aureus CGS00] gi|323440767|gb|EGA98476.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O11] gi|323442922|gb|EGB00545.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O46] gi|329727534|gb|EGG63990.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21172] Length = 290 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|253734527|ref|ZP_04868692.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] gi|253727468|gb|EES96197.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] Length = 290 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVKFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|330994261|ref|ZP_08318189.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] gi|329758728|gb|EGG75244.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 153/277 (55%), Gaps = 19/277 (6%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ T++ H LR+ FP + A G+++ +RR KY+LI L G + ++VHLGM Sbjct: 2 HLEGHTISRASTHHTGLRWPFPPGLADALAGRRVDGFARRGKYILITLSGGMVLVVHLGM 61 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SG ++ ++ A + H H+ I R DPRRFG +DLV S + Sbjct: 62 SGRVLL--STPAGTVSPALHEHLVIETAEGA-----RCGLVDPRRFGMVDLVPASAVEGH 114 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 L +GPEP N F+ +L + + S++K LL+Q++VAG+GNIYV EAL+RA + P Sbjct: 115 RLLAGMGPEPLGNRFDGAWLAARGRGRRSSIKALLLDQRVVAGLGNIYVSEALFRAGIHP 174 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + +L EI+ VL +AI AGGSSLRDYV DG +GYFQ+A+ VY Sbjct: 175 ACAAGDVSGAEYD------RLATEIRAVLEEAIAAGGSSLRDYVQPDGELGYFQHAWRVY 228 Query: 257 GKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G+ C CG + RI Q+GRSTF+C Q Sbjct: 229 GRAGQGCPDCPGPPVCGG-VVRITQSGRSTFFCPRRQ 264 >gi|313201757|ref|YP_004040415.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] gi|312441073|gb|ADQ85179.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] Length = 262 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 19/277 (6%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 + L + V + + LR+ P + + ++RRAKY+L + + ++ Sbjct: 2 QGLAP-LVGQPVAKVIIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYILAQFDT-GYLL 59 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSG + A+ +H+H + + + DPRRFG + + Sbjct: 60 LHLGMSGRICL----LAQDEPAAKHDHFDLHFADGQ-----VLRLRDPRRFGAVLW-AGA 109 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 Q+ L LGPEP +++F+ +L QF +++ +KNA+++ +V G+GNIY E+L+R Sbjct: 110 DPAQHALLNVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGVGNIYASESLFR 169 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A++ P L + +L EI+ L DA+ AGGSSLRD+ DG+ GYFQ Sbjct: 170 ARIHPQTPANQLSR------QACDRLAAEIKATLTDALAAGGSSLRDFFGADGNPGYFQQ 223 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + Y +TGE C C I+ + RSTF+C CQ Sbjct: 224 EYFTYARTGEAC-KICSTPIQNVRLGQRSTFFCPRCQ 259 >gi|152965345|ref|YP_001361129.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] gi|189044663|sp|A6W7S6|FPG_KINRD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151359862|gb|ABS02865.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] Length = 308 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 42/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV+ + R P A TRG + D RR Sbjct: 1 MPELPEVEVVRRGVARWVVGRTVSSARFLHPRVTRRHVAGPDDAGARTRGLVVADAVRRG 60 Query: 58 KYLL-----IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + +++VHLGMSG ++E + H + + Sbjct: 61 KYLWLPLATPDGRAEEAMVVHLGMSGQLLVEAADAPEEK----HLRAVWTFDDGGED--- 113 Query: 113 RVIYNDPRRFGFMDLVE------------------TSLKYQYPPLRTLGPEPADNSFNAI 154 + + D R FG + +V + P+ + +P D +F+ Sbjct: 114 -LRFVDQRTFGGIAVVPLVATPDGGPGGLGETPDGSWSGSMPAPVAHIARDPLDPAFDDA 172 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + ++ + LK ALL+Q +V+G+GNIY EALWRAKL R TRS+ Sbjct: 173 VFARRLRERTTGLKRALLDQTLVSGVGNIYADEALWRAKLHYARPTRSVTPAQAAALLAG 232 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 + +V+ A+DAGG+S YV+++G+ GYF + +VYG+ G PC CG ++RR Sbjct: 233 LR------EVMTAALDAGGTSFDSLYVNVNGASGYFDRSLAVYGQEGRPC-PRCGALVRR 285 Query: 274 IVQAGRSTFYCTYCQ 288 RS+F C CQ Sbjct: 286 DAFMNRSSFSCPVCQ 300 >gi|283470956|emb|CAQ50167.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFIEIAPEPFTNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|186684064|ref|YP_001867260.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] gi|238689422|sp|B2J5G0|FPG_NOSP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|186466516|gb|ACC82317.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] Length = 291 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L + N +T D+ L+R F I RR K Sbjct: 1 MPELPEVETVRKGLNQLTLNQEITGGDVLLNRTIAYPFSVGEFVDGIEKNAIATWHRRGK 60 Query: 59 YLLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 YLL E + VHL M+G + H H V + + + Sbjct: 61 YLLAELSSPCSTSWLGVHLRMTGQLLWLHRDEPLHK----HTRVRLFFGDQQ-----ELR 111 Query: 116 YNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG + V + + L L +P F+ YL + + +K ALL+ Sbjct: 112 FVDQRTFGKIWWVPPGVAVESIITGLAKLAADPFSPEFSVEYLASKLKNRRRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY EAL+++ + P L + L I +VL +I+AGG Sbjct: 172 QSVVAGLGNIYADEALFKSGILPETLCIDLQLKQ------IELLRTAIIQVLETSIEAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +++++ G+ G + VY + GEPC CG I+RI AGRS+ +C+ CQ Sbjct: 226 TTFSNFLNVKGTNGNYGGVAWVYNRAGEPC-RVCGMPIQRIRLAGRSSHFCSECQ 279 >gi|82751277|ref|YP_417018.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus RF122] gi|82656808|emb|CAI81237.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus RF122] Length = 290 Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----------PHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGVFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|329737415|gb|EGG73669.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU028] Length = 290 Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 135/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR KY++ + + + HLGM+G F + + +H V L N Sbjct: 61 IKKVERRGKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG + + Y P + + KN Sbjct: 121 -----KQKLVYSDIRRFGEIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++VL Sbjct: 176 PIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQER------KSLFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCP 286 Query: 286 YCQK 289 CQ+ Sbjct: 287 NCQR 290 >gi|220912983|ref|YP_002488292.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] gi|219859861|gb|ACL40203.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] Length = 323 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 51/327 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+ + + +R F +G + DV RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIESVDVLDPRSIRRHALGVEDFIGNLQGATVSDVVRRG 60 Query: 58 KYLLIE----------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 K+L + ++++ HLGMSG +++ + +H V + Sbjct: 61 KFLWLPLVDGSAHQQAAGNGQAPPSRVALMAHLGMSGQLLMQDAGVP----DEKHLKVRL 116 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDL--------------VETSLKYQYPPLRTLGPEPA 147 L+ + ++ + D R FG + + E+ L + +P Sbjct: 117 HLS-PSAGMPGQLRFVDQRIFGGLFVTALVPTDDGGPGGLAESPLPLIAGEASHIARDPL 175 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D +F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T L + + Sbjct: 176 DPAFSFDRFYQRLRARKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTDKLRRAD 235 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 ++LI + V++DA+DAGG+S YV+++G+ GYF + + YG+ GEPC Sbjct: 236 ------AFRLIDSARAVMLDALDAGGTSFDSLYVNVNGASGYFDRSLNAYGREGEPC-KR 288 Query: 267 C-----GQMIRRIVQAGRSTFYCTYCQ 288 C IRR RS++ C CQ Sbjct: 289 CTAAGIHATIRREQFMNRSSYTCPVCQ 315 >gi|302333354|gb|ADL23547.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus JKD6159] Length = 290 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----------PHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ + +I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVKRRSKYIVFQLDNKREKRILISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++IY+D RRFG + V + Y P + + HQ KN Sbjct: 121 DK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P +K + L + +VL Sbjct: 176 PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKIKDLTYQQQEMVFYYVR------EVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY +P CG I + A R++ YC Sbjct: 230 EEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|70726236|ref|YP_253150.1| hypothetical protein SH1235 [Staphylococcus haemolyticus JCSC1435] gi|68446960|dbj|BAE04544.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 290 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSA--ATRG-------KK 49 MPELPEVE ++R + + N T+ + K + G K Sbjct: 1 MPELPEVEHVKRGIEPYILNATIKSVTFSNKVIEGKQQGKETIIKGINLDGFRLNSESFK 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I + RR+KY++ +E N + + HLGM+G F I S +H HV L N Sbjct: 61 IKSIDRRSKYIVFTIEKNNNQRIILSHLGMAGGFFIVDKLSDISTPNYRKHWHVVFHLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + + T Y P + + +N Sbjct: 121 GK-----QLVYSDIRRFGELRNLATYNDYPAFLEIAPEPFDDNALNYFLDRIKLKKYQNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+ K++AG GNIY CEAL+RA + P RK + + L +Q+VL Sbjct: 176 PIKQMLLDHKMIAGCGNIYACEALFRAGVLPERKVKDVSNQERQM------LFYYVQEVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I+ GG+S+ DY H DG G Q +VY + CG I + V A R++ +C Sbjct: 230 NEGINNGGTSISDYRHADGKTGEMQLHLNVYK---QKTCKICGHDIEQKVIASRNSHFCP 286 Query: 286 YCQK 289 +CQK Sbjct: 287 HCQK 290 >gi|319653434|ref|ZP_08007534.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317394918|gb|EFV75656.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 269 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + +TD+ ++R+ P + +I +++RRAK+L Sbjct: 1 MPELPEMETYRRLLTEQLARKVITDVEVNREKSINVQPAQLKSQLINAQITEITRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++++HL + G I + + V IS + +Y Sbjct: 61 IFKLSSGKNLLLHLMLGGWMYIGNEADNPDRTK----QVIISFGDKK-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + + P F A + + LK +NQ+ ++GI Sbjct: 110 RLGYLHLLTDTEVEKELSDLGPEPLGQTLGFPA--FRERLGSRRGMLKTTFINQQFLSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A L P+RK L ++ + L Q ++ VL AI GG Sbjct: 168 GNCYSDEICFEAGLLPMRKADELDEDE------IKILYQSMKGVLTRAIQFGGYMEEPLF 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GEPCL C I + + R TFYC CQ Sbjct: 222 KGDAKTGGYNEQCRVYDREGEPCL-RCSSPIVKEEISSRKTFYCANCQ 268 >gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] Length = 300 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 130/290 (44%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPEL EVE+IRR L + TVT + + R + F+ G I + RR KY Sbjct: 27 MPELAEVEMIRRVLEPQLGGRTVTKLLVVRPEVVAHPQTEQFAENVCGAVIERLCRRGKY 86 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I + +VHL M+G ++ ++ + +SL + + + D Sbjct: 87 LQIIFQNGSRAVVHLRMTGQLLVLPADSP----PEKYTQLVLSLDDGR-----ELRFLDM 137 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + ++TLGPEP+D A YL + +K+ LL Q+ VAG Sbjct: 138 RRFGRWWFLQKDEPDTFTGMQTLGPEPSDERLTAGYLREKAGASRKAIKDWLLCQQYVAG 197 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A + P R SL + +L +EI + + ++ S DY Sbjct: 198 IGNIYSDEILFAAGIYPGRGACSLTEKEW------ERLAEEIPRTMQFFVEKNEISAEDY 251 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG G PC CG + AGRS+ YC CQK Sbjct: 252 LKSKGRDYRNTPYLQVYGHKGAPC-PKCGAPLAGSRIAGRSSVYCLQCQK 300 >gi|317051383|ref|YP_004112499.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] gi|316946467|gb|ADU65943.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] Length = 278 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + +L + T++D+ + + P F G+ + + RRAK Sbjct: 1 MPELPEVQTLVDDLCHRALVGQTISDVQVTWPRSIASHTPADFRHQLTGQTLTAIRRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL++EL ++VHL M+G F + + I H HV + L + + ++D Sbjct: 61 YLVMELSSGWGLLVHLRMTGKFDLCDPVKPRDI----HEHVILCLGSGQ-----ELRFHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV L LG EP F L +N+ LK+ LL+Q VA Sbjct: 112 TRKFGRFSLVP----DTVGALSHLGVEPLSPEFTPEVLGRLLAGRNTMLKSFLLDQTKVA 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ A+L P R + +I +Q+ L + + G+S + Sbjct: 168 GIGNIYADEALFEARLHPANPCRLVAAEQVASLHG--AIIMVLQRGLRNMGTSLGTSKGN 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G ++ V+ +TG PC + CG I RI+ RST +C CQ Sbjct: 226 FYSVAGRPGRNEDELKVFRRTGTPCCA-CGTTIERIILIQRSTHFCPLCQ 274 >gi|329724651|gb|EGG61157.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU144] Length = 290 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR+KY++ + + + HLGM+G F + + +H V L N Sbjct: 61 INKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG + + Y P + + KN Sbjct: 121 -----KQKLVYSDIRRFGEIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++VL Sbjct: 176 PIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQER------KSLFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCP 286 Query: 286 YCQK 289 CQ+ Sbjct: 287 NCQR 290 >gi|296130132|ref|YP_003637382.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] gi|296021947|gb|ADG75183.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] Length = 324 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 41/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ + R ++R P F+A G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVDVRRGYSVRRHDAGPLDFAARLVGRRLEAAVRRG 60 Query: 58 KYLLI-----ELEGNLSIIVHLGMSGSFIIEHT-----------------SCAKPIKNPQ 95 K+L + G+ +++ HLGMSG ++ S Sbjct: 61 KFLWLLLDEGAGRGDDALMAHLGMSGQLLVRGPAAGPAALDDAPGDPVATSGPTGWVEHP 120 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL--------KYQYPPLRTLGPEPA 147 H V + L + + + P+ + + Sbjct: 121 HLRVRLRLDDGSALDFVDQRTFGHLSVPDLVPTPDGAPGGLGSARPAVPAPVAHIARDLL 180 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D + + + + + +K ALL+Q +V+G+GNIY EALWRA+L R T +L Sbjct: 181 DPALDRDAVVAALRARRTEVKRALLDQTLVSGVGNIYADEALWRARLHGTRPTAALRPVE 240 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 +++ +V+ +A+ GG+S YV ++G+ GYF + +VYG+ G PC Sbjct: 241 ------ARRVLDAAHEVMTEALGQGGTSFDALYVDVNGASGYFDRSLAVYGQDGRPC-RR 293 Query: 267 CGQMIRRIVQAGRSTF 282 CG +RR A RS++ Sbjct: 294 CGTPVRRDAFANRSSY 309 >gi|294631624|ref|ZP_06710184.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292834957|gb|EFF93306.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 289 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 19/290 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + TV ++ + +R P F+ G ++ SRR KYL Sbjct: 1 MPEVEVVRRGLERWVAQRTVAEVAVLHPRAVRRHLAGPDDFARRLIGHRVGTPSRRGKYL 60 Query: 61 LIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + I HLGMSG +++ A +H + + + T + + D Sbjct: 61 WLPLADSDQAILAHLGMSGQLLVQPREAA----AEKHLRIRVRFADEDGT---ELRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L ET + + +P D F+ +K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHETGPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T +L + +L+ ++ V+ +A+ GG+S Sbjct: 174 VGNIYADEALWRARLHYERPTATLTRPRT------AELLGHVRDVMNEALAVGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ G PC C +RR RS+ YC CQ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSHYCPKCQ 276 >gi|27468284|ref|NP_764921.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57867171|ref|YP_188826.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251811084|ref|ZP_04825557.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|293366363|ref|ZP_06613042.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315830|gb|AAO04965.1|AE016748_199 formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57637829|gb|AAW54617.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251805381|gb|EES58038.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|291319488|gb|EFE59855.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733766|gb|EGG70092.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU045] Length = 290 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR+KY++ + + + HLGM+G F + + +H V L N Sbjct: 61 IKKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG + + Y P + + KN Sbjct: 121 -----KQKLVYSDIRRFGEIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++VL Sbjct: 176 PIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQER------KSLFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCP 286 Query: 286 YCQK 289 CQ+ Sbjct: 287 NCQR 290 >gi|242242955|ref|ZP_04797400.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|242233556|gb|EES35868.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|319401004|gb|EFV89223.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis FRI909] Length = 290 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + ++K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPLIKSAKIEKVTFAKNVINGKNNHRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR+KY++ + + + HLGM+G F + + +H V L N Sbjct: 61 IKKVERRSKYIIFYIAYHDEDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + +++Y+D RRFG + + Y P + + KN Sbjct: 121 DQ-----KLVYSDIRRFGEIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTLKKYKNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++VL Sbjct: 176 PIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQER------KSLFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCP 286 Query: 286 YCQK 289 CQ+ Sbjct: 287 NCQR 290 >gi|242373980|ref|ZP_04819554.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] gi|242348334|gb|EES39936.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] Length = 290 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 129/304 (42%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + +KN + + ++ F+ T G Sbjct: 1 MPELPEVEHVKRGIEPYIKNERIKKVIFSDNVIKGKKDNRETIIKGMELDSFAKLTEGYT 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR+KY+++ +I HLGM+G F + +H V L N Sbjct: 61 ITQVLRRSKYIVLHIERDNDQRILISHLGMAGGFFVVDDLEDIATPNYRKHWQVIFELEN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + V Y P + + + N Sbjct: 121 EK-----KLVYSDIRRFGEIRNVAGFESYPPFLEIAPEPFEEEALAHYLSCFDINKYANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P + +L L +++VL Sbjct: 176 PIKQMILDHKVIAGAGNIYACEALFRAGVRPDKIAHTLTHQEREM------LFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + CG I V A R++ +C Sbjct: 230 KEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKICGHEIETKVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 NCQK 290 >gi|314936208|ref|ZP_07843555.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] gi|313654827|gb|EFS18572.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] Length = 290 Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 140/304 (46%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----------PHHFSAATRGKK 49 MPELPEVE ++R + + N T+ I +K + F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F + H S +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++++D RRFG + + + Y P + + + Q N Sbjct: 121 GK-----KLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEEALQHFNHYLSQKKVANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+ KI+AG GNIY CEAL+RA + P RK + L +Q+VL Sbjct: 176 PIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQER------QLLFYYVQEVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ +C Sbjct: 230 KEGIDNGGTSISDYRHADGKTGKMQLHLNVYK---QKTCKVCGHDIEQKVIASRNSHFCP 286 Query: 286 YCQK 289 YCQK Sbjct: 287 YCQK 290 >gi|284928877|ref|YP_003421399.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] gi|284809336|gb|ADB95041.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] Length = 284 Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + T+ + ++L + F + RR K Sbjct: 1 MPELPEVESICRKLNELTTGQTILGGQVLLARSLAYPSSMQEFLNLIDNVDLKIWKRRGK 60 Query: 59 YLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL E I+ HL M+G ++ S H + + N Y + + Sbjct: 61 YLLAELDSNKGWIVFHLRMTGQLLLTQQSEPLSK----HTRLRLFCKN-----SYELRFI 111 Query: 118 DPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + ++ + + L+ LG EP N F+ YL + N+K LL+Q Sbjct: 112 DIRTFGKVWVIPPSYNPEDIITGLKKLGVEPFSNDFSINYLIENLTRYKRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I+AGIGNIY EAL+R+ + P K L + L + I +VL +ID GG++ Sbjct: 172 IIAGIGNIYADEALFRSNIHPETKGAELTLKQ------IKNLQKAILEVLSKSIDEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+++I G+ G + VYG+ PC C I+RI GRS+ +C CQ+ Sbjct: 226 FSDFLNITGNKGNYTEFAWVYGRNHSPC-RICSTPIKRIKLNGRSSHFCPKCQQ 278 >gi|319935866|ref|ZP_08010292.1| DNA glycosylase [Coprobacillus sp. 29_1] gi|319809133|gb|EFW05614.1| DNA glycosylase [Coprobacillus sp. 29_1] Length = 270 Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 87/289 (30%), Positives = 133/289 (46%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L + + + I ++ + F + I D+ R KYL Sbjct: 1 MPELPEVETVRQTLRQFILDENIEGIDVYYDKIINGDTQEFIERLTHQTIRDIDRVGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + + HL M G + I H HV L + + + Y D R Sbjct: 61 IF-LLDEDAFVSHLRMEGKYHIVKRETPVDK----HTHVVFHLHDGQD-----LRYIDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++LV+ L + PL LG EP D + L HK + +K ALL+Q I+ GI Sbjct: 111 KFGRLELVDRHLYREQLPLMKLGKEPFD--ISGEELYALLHKTSLPIKTALLDQSIMCGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + K+ P + L + +++L Q VL AI GG+++ + Sbjct: 169 GNIYANEICFLMKIDPRTRASRLSKKR------VHELKQISVDVLNRAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ +G+ PC C I++I+ R T+YC +CQK Sbjct: 222 DANGIHGLFQVQLKAHGQKICPC---CQGEIKKIMLNQRGTYYCPHCQK 267 >gi|228475233|ref|ZP_04059959.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] gi|228270844|gb|EEK12246.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] Length = 290 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 140/304 (46%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----------PHHFSAATRGKK 49 MPELPEVE ++R + + N T+ I +K + F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F + H S +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++++D RRFG + + + Y P + + + Q N Sbjct: 121 GK-----KLVFSDIRRFGEIRNLNSFEDYPSFLEIAPEPFDEEALQHFNHYLSQKKVANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+ KI+AG GNIY CEAL+RA + P RK + L +Q+VL Sbjct: 176 PIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQERQM------LFYYVQEVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ +C Sbjct: 230 KEGIDNGGTSISDYRHADGKTGKMQLHLNVYK---QKTCKVCGHDIEQKVIASRNSHFCP 286 Query: 286 YCQK 289 YCQK Sbjct: 287 YCQK 290 >gi|54020255|ref|YP_116103.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 232] gi|53987428|gb|AAV27629.1| foramidopyrimidine DNA glycosylase [Mycoplasma hyopneumoniae 232] Length = 275 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVITVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + K + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTY-----KSPQWGKYDYISFVFSDNS-----VLNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPF--FIKVDDFYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L ++I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKAAKLISRKE------AELIIDFSKKILQESIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|71893928|ref|YP_279374.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae J] gi|71852055|gb|AAZ44663.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae J] Length = 275 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + K + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTY-----KSPQWGKYDYISFVFSDNS-----VLNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPF--FIKVDDFYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L +I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKTAKLISRKE------AELIIYFSKKILQQSIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|88856700|ref|ZP_01131355.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] gi|88813997|gb|EAR23864.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] Length = 298 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 30/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T + + ++LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGATAASVTVFDERSLRRHEGPSEDFIDRLTGRVFLPPQRRG 60 Query: 58 KYLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------NPQHNHVTISLTN 105 K++ I + +++ HLGMSG ++ S + +P+H + ++ + Sbjct: 61 KFMWIPLTDSDDAHGEALVTHLGMSGQVLLRDQSTDDRLTRIRIELDHPEHGALRLNFVD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 I+ + V+ + + +P D F+ K + Sbjct: 121 QR-------IFGSMAIDSMLPTVDQPAFAVPSQVAHIARDPLDPHFDDAGFLRALKAKRT 173 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K ALL+Q +V+GIGNIY EALW A++ + T +L + L+ E++ V Sbjct: 174 TVKRALLDQTLVSGIGNIYADEALWAARVHYNQPTGTLSRA------KALLLLAEVRAVF 227 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ GG+S Y++++G GYF ++ +VYG+ G C CG+ + R R + +C Sbjct: 228 SKALAEGGTSFDTQYLNVNGESGYFAHSLNVYGQQGRAC-PRCGREVVREQFMNRGSHFC 286 Query: 285 TYCQK 289 +CQ+ Sbjct: 287 RFCQR 291 >gi|72080906|ref|YP_287964.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 7448] gi|71914030|gb|AAZ53941.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae 7448] Length = 275 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + K + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTY-----KSPQWGKYDYISFVFSDNS-----VLNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPF--FIKVDDFYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L ++I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKAAKLISRKE------AELIIYFSKKILQESIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|294155508|ref|YP_003559892.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] gi|291600003|gb|ADE19499.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] Length = 274 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ L ++K + ++ ++ + + F + K I + KY Sbjct: 1 MPEYPEVTVVTNALNEIVKFKKIKEVIVNLDKIIKNVDVEKFKNTLKDKVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I+ E + SII H+ M G F ++N +H+ + + ++IYND Sbjct: 61 IVIKFESDWSIIAHMRMEGKFFY---ETNNFLRNKKHDLIIFVFDDGN-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + +P + LG P N +A + + +K + +K LL+Q++V G Sbjct: 113 RRFG-TMDLHYGDVNNFPKISKLGNLP--NQLDASKIMDKCKRKTTAIKTTLLDQELVLG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P+ K + + N ++ ++ +I+ GGS++ Y Sbjct: 170 IGNIYADEILYASKINPLTKAKDISLNQW------KTILNFGHTIMTRSIELGGSTVNSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I+ G +QN VYGK E C + C +I GR T YC CQK Sbjct: 224 SSINNKEGSYQNELKVYGKYKEFCTT-CKSQFEKIKVNGRGTTYCPKCQK 272 >gi|269794453|ref|YP_003313908.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269096638|gb|ACZ21074.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 309 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 89/311 (28%), Positives = 143/311 (45%), Gaps = 33/311 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V + + R ++R P F+A G ++++ +RR Sbjct: 1 MPELPEVETVRDGLARHVLGARVDCVEVRRDYSVRRHEGGPVDFAARLSGHRLVEAARRG 60 Query: 58 KYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+ L+++ HLGMSG ++ + H V + LT T + + Sbjct: 61 KYLWLTLDEPGLALLGHLGMSGQLLVRSGDTLTAESS--HLRVRLHLTAADGTP-LALDF 117 Query: 117 NDPRRFGFMDLVE------------TSLKYQYPPLRTLGPEPADNSFNAIYLT------H 158 D R FG + + E + + P + + A Sbjct: 118 VDQRTFGHLSVTELVATPDGLPGGLGTDEPLVPEPVSHIARDLLDPAVAEGTAGRTALVD 177 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + ++ + +K ALL+Q +V+GIGNIY EALWRA R T + + Sbjct: 178 RVRRRRTGIKRALLDQTVVSGIGNIYADEALWRASTHYARGTAGMSRAQVAAVLA----- 232 Query: 219 QEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 ++V+ +A+ GG+S YV+++G+ GYF + + YG+ G+PC CG IRR Sbjct: 233 -AAEQVMREALSQGGTSFDALYVNVNGASGYFDRSLAAYGQAGKPC-RRCGATIRRDEFM 290 Query: 278 GRSTFYCTYCQ 288 RS+F C CQ Sbjct: 291 NRSSFSCPVCQ 301 >gi|295098756|emb|CBK87845.1| formamidopyrimidine-DNA glycosylase (fpg) [Eubacterium cylindroides T2-87] Length = 276 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K + D+ ++ L + F ++ + ++ D R KY Sbjct: 1 MPEAPEVQTVLSTLEHQIKGAKILDVKVYYPKLIQNLDVTEFVSSLKNQRFCDFFRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + +L +IVHL M G F I + H H L + + Y+D Sbjct: 61 LGF-VMDDLDLIVHLRMEGKFYILKELPSDLK----HIHCVTYLDDGR-----LLCYHDT 110 Query: 120 RRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + +G + D + + + H N+K+ALL+Q I+A Sbjct: 111 RKFGRMALYPKAVDVRRLDCFKNVGYDCLDENLDGMTFYKIIHPLKRNIKSALLDQSIIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+ KL P + + + + + +I ++++ A+ AGG+++R Sbjct: 171 GVGNIYADEILFSCKLDPRSRCQKISKKD------CENIIYHTKRIIRGAMKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K EPC C I++IV + R T+ C+ CQK Sbjct: 225 YTSSLGVTGLFQLELKVHSKKDEPC-PVCKNKIKKIVVSQRGTYLCSNCQK 274 >gi|148377581|ref|YP_001256457.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] gi|148291627|emb|CAL59013.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] Length = 279 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N+T+T++ + L + F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKGNILNLTITNVIVKLDKLIKNATASEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + + + +H+++ L + + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYF----TDSSINRTRKHDYIIFELDS-----QMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P KT P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKINPWTKTNK------IPYEKFKEILSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ + PC + C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRANMPC-NKCNALIQQEFIAQRMTYYCPICQK 272 >gi|239637990|ref|ZP_04678951.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] gi|239596553|gb|EEQ79089.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] Length = 290 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + N T+ I + F T G Sbjct: 1 MPELPEVEHVKRGIEPYAINTTINKITFSENVKKGKEDNRETIIKGMTLDSFQRLTEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTN 105 I + RR+KY++ + + + HLGM+G F + H +H V L N Sbjct: 61 ITKIERRSKYIVFYINRDSEQRILISHLGMAGGFFVVDHLEQITVPNYRKHWQVIFELDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++IY+D RRFG + V + Y P D + + +T++ + Sbjct: 121 GK-----KLIYSDIRRFGEIRNVSSFDAYPSFLSIAPEPFDEDAMQHFLDITNKKNYAKK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K+++G GNIY CEAL+RA + P R T+ L Q ++ VL Sbjct: 176 PIKQVILDHKVISGCGNIYACEALFRAGILPSRLTQDLTQQEKEMVF------YHVRSVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + CG I V A R++ YC Sbjct: 230 NEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKVCGHSIETKVIASRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 TCQK 290 >gi|12045118|ref|NP_072929.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|2494593|sp|P55825|FPG_MYCGE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3844857|gb|AAC71484.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|166078880|gb|ABY79498.1| formamidopyrimidine-DNA glycosylase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 284 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N + + ++ RK L+ P + + + D+ R+ KY Sbjct: 1 MPELPEVTTVINELKETVLNKPLDQVQVNLRKVLKNIDPQLLNKQLKNQFFTDIKRKGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E K H V + + ++ Y+D Sbjct: 61 IIFLLSNGLYLVSHLRMEGKYFFEERGSKFNQK---HVLVEFHFDDGS-----QLNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L E Q L L +P + F+ + + +K +L+Q +++G Sbjct: 113 RQFGTFHLYE--KLEQAAQLNKLAFDPLEAGFDYRKIFQKAQNSKRKVKTFILDQTVISG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P L + L + K+L AI G+++ + Sbjct: 171 IGNIYADEILFASKINPETMVDQLTIKE------IEILCKNATKILAKAIVMKGTTISSF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +QN V+ K +PC S C Q+I + GR +++C CQK Sbjct: 225 SFKKDHTGGYQNFLKVHTKKDQPC-SVCNQLIVKKKINGRGSYFCLNCQK 273 >gi|320334927|ref|YP_004171638.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] gi|319756216|gb|ADV67973.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] Length = 270 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 137/296 (46%), Gaps = 38/296 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ T+ I + D + G+ + D++RR KY+ Sbjct: 1 MPELPEVETTRRKLEPLLLGRTIVRIEHDAPDKYRD-----THRAHGRVVRDLTRRGKYI 55 Query: 61 LIE------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L E + +IVHLGM+G F + H VT+ + Sbjct: 56 LARLQDPDGHEDDAELIVHLGMTGGFRY---------EPGPHTRVTLHTDEG------AI 100 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 Y D R+FG +V+ P L +GPEP + F A+ + +K LL+Q Sbjct: 101 YYQDARKFGKWAVVDPGAYASMPTLAGMGPEPLGDDF-AVDAFVRAAATCGPVKPWLLSQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 VAG+GNIY E+LWRA++ P + D +L I++V+ +A+ AGGS Sbjct: 160 VPVAGVGNIYADESLWRARIHPAQ--------RRLTLDEATRLHAAIREVMAEAVQAGGS 211 Query: 235 SLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +L D Y DG G FQ + Y + GEPC CG I + V A R T +C CQ Sbjct: 212 TLSDGTYAQPDGLSGLFQQQHNAYARDGEPCA-RCGTTITKSVLAQRGTHHCPACQ 266 >gi|269929067|ref|YP_003321388.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269788424|gb|ACZ40566.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 286 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 120/298 (40%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + L R L P A G ++ V R KYL Sbjct: 1 MPELPEVEAARRGIAEQLLGRVLVGYELTRPALVVPAPGLTLDALVGSRLECVERHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---------CAKPIKNPQHNHVTISLTNNTNTKK 111 + +++HL ++G + + H + + + Sbjct: 61 FL-SFEPAVLVIHLKLAGQLVARGSGIPGFAAGHPVPAYDAPLPHKSTHLRFDFDGDAH- 118 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-QFHKKNSNLKNA 170 + D R F + L+ + LGP+ D +F L + LK Sbjct: 119 --LYLTDIRHFARVWLLPHDDLPAFREGLHLGPDVLDPAFTVETLRQGLARRTVGRLKPT 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIYV E+LW+AKL P R SL + +L + I + A+ Sbjct: 177 LLDQSLVAGLGNIYVDESLWQAKLHPERTAASLTDAE------IERLYEGIHTTMELALP 230 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+ + + +G F V+G+ G PC CG I +I R T+ C CQ Sbjct: 231 TGGARILN-SKAQTEVGEFP---FVHGREGLPC-PRCGTAIIKIRVNNRGTYLCPQCQ 283 >gi|256824934|ref|YP_003148894.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688327|gb|ACV06129.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 297 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 27/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + R + A G+++ RR Sbjct: 1 MPELPEVEVVRAGLESHVVGRTIEVADVRGDRVARRHEGGAAALARALTGRRLCSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + L+ +++ HLGMSG ++ +H H + + T + + Sbjct: 61 KFLWLPLDDGHALMTHLGMSGQMLVLPAEEP----PVRHEHARLDFEDEGPT----LRFA 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLR--------TLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 D R FG + + P+P + F+A + + + +K Sbjct: 113 DQRTFGGWSVDPLVPDPHGGDHPGGVPATATHIAPDPFETCFDAGAVAARLRTRRGPVKR 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 A+L+Q +V+G+GNIY EALWR + R SL L+ +Q V+ +A+ Sbjct: 173 AILDQGLVSGVGNIYADEALWRTGVHGERPGHSLTGPR------ARALLTHLQAVMGEAL 226 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG+S YV+++G+ GYF +VYG+ G PC CG + R GRS+ +C CQ Sbjct: 227 EQGGTSFDALYVNVNGASGYFDRRLAVYGQQGRPC-PACGSTVLRSPFDGRSSHWCPTCQ 285 >gi|269978188|ref|ZP_06185138.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933697|gb|EEZ90281.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 306 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 134/301 (44%), Gaps = 25/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFP--HHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + N VT + H ++LRF F GK++ VSRR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQPGGFSRFHELLVGKRLESVSRR 64 Query: 57 AKYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN--------T 107 K+L +E + HLGMSG + A I H + +L N Sbjct: 65 GKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNGLELVFCDQR 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V +P G + T L + + D + + ++ + + Sbjct: 121 TFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRAI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q V+GIGNIY E L+ A + P ++L + L L++ V+ Sbjct: 181 KTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGED------LRNLLEVAASVMRH 234 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV GR+T +C + Sbjct: 235 ALEFGGTSFDQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRATVFCAH 293 Query: 287 C 287 C Sbjct: 294 C 294 >gi|283769053|ref|ZP_06341959.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] gi|283104410|gb|EFC05787.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] Length = 269 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + ++ + P F+ G++ SRR KYL Sbjct: 2 MPELPEVETVVRTLEQQISQCQIRSVRVYYDKIV-GDPKRFTDCLSGQRFRYFSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+ N +++VHL M G F I+ H HV L N + Y D R Sbjct: 61 LFQLDRN-TLVVHLRMEGKFYIQDPREPLNR----HIHVVFDLDNG-----MELRYMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ + LGPEP D F++ Y+ +K + LK+ LL+Q VAGI Sbjct: 111 KFGRMEVLP--KELDLKNFHGLGPEPFDPIFDSEYVYAFLKRKKAPLKSVLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L + + P R L K L++ +Q++L ++I+ GG+++R Y Sbjct: 169 GNIYADEILAKIGIRPKMSARRLS------KKKCEALVEAVQEILANSIELGGTTIRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + C + I+ + AGRS++YC +CQK Sbjct: 223 SSLGVAGRFQTKCMVHL---QKICPKCQREIKMVRVAGRSSYYCPHCQK 268 >gi|300741696|ref|ZP_07071717.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380881|gb|EFJ77443.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 331 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 56/334 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + + +++R F+ G +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVHILDERSIRRHIGGSADFTMRLEGTRIRGAYRRG 60 Query: 58 KYLLI-----------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + + ++++HLGMSG +++ +H + Sbjct: 61 KYMWLTLSASDDEPSPKPGDSDDTLLPYALVIHLGMSGQLLVKTPEFP----AEKHLKIV 116 Query: 101 ISLT--NNTNTKKYRVIYNDPRRFGFMDLVE-----------------TSLKYQYPPLRT 141 + L N+ K + + D R FG M L E + Sbjct: 117 LELEPANDDIGKTIELRFVDQRIFGGMFLSEVVPGIPAGASLAGAEEIPEELLVPEAVEH 176 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 +G +P D F+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + + Sbjct: 177 IGRDPVDPYFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAKPAK 236 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTG 260 SL +L + +VL +A+ AGG+S YV+++G GYF + + YG+ G Sbjct: 237 SLSAAQT------RELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYGRAG 290 Query: 261 EPCLSNC-----GQMIRRIVQAGRSTFYCTYCQK 289 EPC C +I R RS++ C +CQ+ Sbjct: 291 EPC-RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 323 >gi|194246472|ref|YP_002004111.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] gi|193806829|emb|CAP18258.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] Length = 270 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++ R+L + + + +I + + + +KI++++R+ KYL Sbjct: 1 MPELPEVEVVVRSLKKNLIDKKIINIKVLYEPIVGKL--DIFKKILNQKILNLTRKGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HL M G + + H H + L NN + + D R Sbjct: 59 IFFFSNELVLVGHLRMEGKLYFKPSDEIIVK----HEHFVLFLENN-----ISLRFKDTR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E Q L L EP + + K ++KN+LL+QKI+AG+ Sbjct: 110 KFGRFIVYEQKNYLQSSKLEHLALEPFE--ISTFDFYQILKNKKKSIKNSLLDQKIIAGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +K+ P ++ + K++ +++ AI GG+S+ + Sbjct: 168 GNIYANEVLFLSKIHPANRSCDITFEQT------EKILNYSKQIFKQAILLGGTSINTF- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ V+GK + CL C I +I GR T++C+ CQ Sbjct: 221 DSLGIQGSFQKKLLVHGKEKQSCLVCCK-PIMKIKLGGRGTYFCSNCQ 267 >gi|223044143|ref|ZP_03614182.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] gi|222442537|gb|EEE48643.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] Length = 290 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 128/304 (42%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELDSFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ + +I HLGM+G F + N +H V L N Sbjct: 61 ISEVLRRSKYIVFHIEKDNDHRILISHLGMAGGFFVVDDLEEIGTPNYRKHWQVIFELNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + + Y P + + + N Sbjct: 121 GK-----KLVYSDIRRFGEIRNIANYESYPPFLEIAPEPFDKEAMIHYLSCFDINKYANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+R + P + SL L +++VL Sbjct: 176 PIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQKEM------LFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + CG I V A R++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKTCGHEIETKVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 NCQK 290 >gi|289550553|ref|YP_003471457.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] gi|289180085|gb|ADC87330.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] Length = 290 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G K Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+ I + +I HLGM+G F I + N +H HV L+N Sbjct: 61 IYKVERRSKYINIYIEKNQECRVLISHLGMAGGFFIVNHLDEIHAPNYRKHWHVIFHLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++Y+D RRFG + V+ Y P + + +Q K+ Sbjct: 121 GK-----LLVYSDIRRFGEIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQPKVKHK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P + + L E+Q VL Sbjct: 176 PIKQLILDHKVIAGCGNIYACEALYRAAIHPAT------EVQSLNQQARQNLFLEVQAVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I+ GG+S+ DY H DG G Q +VY + + C CG I + V A R++ +C Sbjct: 230 NEGIEYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|93117331|gb|ABE99583.1| fpg [Neisseria meningitidis] Length = 247 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 14/261 (5%) Query: 9 IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL 68 R + ++ TV + L + LR+ G++++ RRAKYL++ + Sbjct: 1 TTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQT-G 59 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 +++HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + Sbjct: 60 ILLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWY 114 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 E ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+ Sbjct: 115 E-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANES 173 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GY Sbjct: 174 LFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGY 227 Query: 249 FQNAFSVYGKTGEPCLSNCGQ 269 FQ ++VYG+ +PC CG Sbjct: 228 FQQEYTVYGRHNQPC-PQCGG 247 >gi|108805235|ref|YP_645172.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] gi|108766478|gb|ABG05360.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE +I ++ + V + R ++ P FS RG+ + RR K + Sbjct: 1 MPELPETTVISEDIRRLAAGRRVLRAEVFRPDVTNVPPEEFSGRLRGRVLEGTGRRGKLI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G +VHL +SG + + + N + ++ Sbjct: 61 VLDFGGV-VGLVHLVISGRVL----RLPAWTEPDRLNTAVLEFEGGPVLSFAKLWLGY-- 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L E ++P L LGP+P F YL ++ + +K LL+Q +VAG+ Sbjct: 114 ----FHLYEPERVGEHPLLARLGPDPFSEGFTPGYLAR-AFRRRAAVKGLLLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ A++ P+R+ +L + + + +K+L AI+ G++ Y Sbjct: 169 GNIYVDEVLFAARVHPLRRADTLSEEE------IRAIHAATRKILRRAIELRGTTFDSYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q V+ + G+PC +CG I ++ AGR T C CQ Sbjct: 223 DAFGESGGYQRELRVFARAGKPC-PSCGARIAKLRVAGRGTHVCPACQ 269 >gi|314933843|ref|ZP_07841208.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] gi|313653993|gb|EFS17750.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] Length = 290 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 127/304 (41%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELDSFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +I HLGM+G F + N +H V L N Sbjct: 61 ISEVLRRSKYIVFHIEKDNDRRILISHLGMAGGFFVVDDLKEIGTPNYRKHWQVIFELNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + + Y P + + + N Sbjct: 121 GK-----KLVYSDIRRFGEIRNIANYESYPLFLEIAPEPFDKEAMIHYLSCFDINKYANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+R + P + SL L +Q+VL Sbjct: 176 PIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQK------EMLFYYVQEVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + CG I V A R++ +C Sbjct: 230 EEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKTCGHEIETKVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 NCQK 290 >gi|226227840|ref|YP_002761946.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226091031|dbj|BAH39476.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 279 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPE E I R+L ++ V D+ + R + LR +A G +I V RRAK Sbjct: 1 MPELPETETIARDLHAMVVGSVVRDVSVPRPDVLREIAAADLCSALSGGRITRVWRRAKL 60 Query: 60 LLIELEGNLSIIVH----LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++L H +G +++ + ++ V +SL + + Sbjct: 61 IVLDLTLADRQNSHLVVQPRFTGGLLVDDGTLPTSE--FAYSCVAMSLGDGRT-----LH 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D RR G + L+ + +Y P A + ++ + L++Q+ Sbjct: 114 YRDVRRLGTVALMPEARFLEYSSGLGPEPLDQTFDATAFSGCVRLSHQSIKV--VLMDQR 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIY EALWRA + P R+ SL +L ++ VL +I A G+S Sbjct: 172 RLAGVGNIYANEALWRAGIDPSREASSLTFAE------AERLHTALRDVLTASIAARGTS 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-IRRIVQAGRSTFYCTYCQ 288 RDY G G F + YG+ GEPC CG+ + GRST +C CQ Sbjct: 226 FRDYRDARGERGTFVEQLAAYGRGGEPC-PRCGRRLVVTHAVDGRSTVFCPGCQ 278 >gi|295396032|ref|ZP_06806216.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] gi|294971120|gb|EFG47011.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] Length = 329 Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 87/337 (25%), Positives = 143/337 (42%), Gaps = 61/337 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-----FDFP----HHFSAATRGKKII 51 MPELPEVE +R+ L + + + T+T + + + P F A G +I+ Sbjct: 1 MPELPEVESVRQGLSVWLTDATITRAQVLDARILGTTSARNVPIERVASFERALEGVRIV 60 Query: 52 DVSRRAKYLLIELEGN-----------------------LSIIVHLGMSGSFIIEHTSCA 88 V RR KY+ + L ++ +HLGMSG I Sbjct: 61 SVERRGKYMWMPLAVGGLVGGGLVSDGEARDGEAAEVDEWALAMHLGMSGQARIHEA--- 117 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF---------------GFMDLVETSLK 133 ++P H H ++ + D R F + Sbjct: 118 ---EDPLHPHTRAVFDVAGPAGVGQIRFVDQRIFGHLGVERLVLGVAGTPGATGTAGERR 174 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 R G +P + F+ + +KN +K+ALL+Q++V+G+GNIY EAL+ A Sbjct: 175 LVAESARGAGLDPFEVGFSVPMVARAIARKNVAIKSALLDQRVVSGVGNIYADEALFEAG 234 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNA 252 + P + + ++++ + V+ A++ GG+S YV+++G GYF+ + Sbjct: 235 VHPAARASR------LRISRIERVLEAARDVMARALEVGGTSFDALYVNVNGESGYFERS 288 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC+ C I R+V GRST C CQK Sbjct: 289 LQVYGREGQPCV-RCSTPITRVVLGGRSTHVCVKCQK 324 >gi|315658047|ref|ZP_07910920.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] gi|315496937|gb|EFU85259.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] Length = 290 Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 135/304 (44%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G K Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTN 105 I V RR+KY+ I + +I HLGM+G F + H +H HV L+N Sbjct: 61 IYKVERRSKYINIYIEKNQERRVLISHLGMAGGFFIVNHLDEIYAPNYRKHWHVIFHLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++Y+D RRFG + V+ Y P + + +Q K+ Sbjct: 121 GK-----LLVYSDIRRFGEIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQTKVKHK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K++AG GNIY CEAL+RA + P + + L E+Q VL Sbjct: 176 PIKQLILDHKVIAGCGNIYACEALYRAAIHPAT------EVQSLNQQARQNLFLEVQAVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + + C CG I + V A R++ +C Sbjct: 230 NEGIKYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 VCQK 290 >gi|308177248|ref|YP_003916654.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307744711|emb|CBT75683.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 307 Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 142/313 (45%), Gaps = 37/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ TV + + +R F G I V RR Sbjct: 1 MPELPEVEVVREGLDKWIRARTVQSVQVLDPRSVRRHIDGVDDFEQTLTGCTITSVVRRG 60 Query: 58 KYLLIELEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+L ++LEG + HLGMSG ++E + +H V +SL+ + + Sbjct: 61 KFLWMDLEGLETPTALVAHLGMSGQLLVEEPDAP----DEKHLKVRLSLS-QKSVFPREL 115 Query: 115 IYNDPRRFGFMDLVETSLKYQ-------------YPPLRTLGPEPADNSFNAIYLTHQFH 161 + D R FG M L + + D L Sbjct: 116 RFVDQRIFGGMFLSPLVATADALPAGAGSIRATIPEAAAHIARDVMDPHRAPEDLYVSLR 175 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + LK A+L+Q I++G+GNIY EALW+A LS +R T ++ + + +L + Sbjct: 176 RRTTQLKRAILDQGIISGVGNIYADEALWQAGLSGLRNTATIRRPE------VDRLNDAL 229 Query: 222 QKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRIV 275 V+ A+ AGG+S YV+++G+ GYF + + YG+ G+ C C +IRR Sbjct: 230 VDVMTRALAAGGTSFDSLYVNVNGASGYFARSLNAYGREGKACA-RCLENGRDSLIRRDP 288 Query: 276 QAGRSTFYCTYCQ 288 GRS++ C CQ Sbjct: 289 FMGRSSYSCPVCQ 301 >gi|121593321|ref|YP_985217.1| formamidopyrimidine-DNA glycosylase [Acidovorax sp. JS42] gi|166215605|sp|A1W4G6|FPG_ACISJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120605401|gb|ABM41141.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Acidovorax sp. JS42] Length = 271 Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 139/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + + LR+ A G+++ V RR KY Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVGKP-LRWPLGTE-PAVLVGRRVCGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A+ H+H + T + +DPR Sbjct: 58 LLLDLDEGLLLIHLGMSGSLRFARDLPAR----GAHDHFELITDQGT------LRLHDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + S L G EP F K + +K LL +V G Sbjct: 108 RFGAVVWAAGESDPRARKLLDGWGLEPLGEDFAFETFHAGLRAKRTPIKQLLLAGTVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A + P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLAGIRPTTRACAIGPQR------ARRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G+FQ +VYG+ G PC CG +R + Q RST++C +CQ+ Sbjct: 222 SSADGSAGHFQLEANVYGRAGLPC-RQCGTPVRLLRQGQRSTYFCPHCQR 270 >gi|307700916|ref|ZP_07637941.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] gi|307613911|gb|EFN93155.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] Length = 306 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 134/301 (44%), Gaps = 25/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFP--HHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + N VT + H ++LRF F GK++ VSRR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQPGGFSRFHELLVGKRLESVSRR 64 Query: 57 AKYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN--------T 107 K+L +E + HLGMSG + A I H + +L N Sbjct: 65 GKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNGLELVFCDQR 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V +P G + T L + + D + + ++ + + Sbjct: 121 TFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRAI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q V+GIGNIY E L+ A + P R+L + L L++ V+ Sbjct: 181 KTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGED------LRNLLEVAASVMRH 234 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV GR+T +C + Sbjct: 235 ALEFGGTSFDQLYVDSWGNPGDFASELLVYGRGGQAC-HQCGQALDKIVLDGRATVFCAH 293 Query: 287 C 287 C Sbjct: 294 C 294 >gi|319892737|ref|YP_004149612.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|317162433|gb|ADV05976.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|323464231|gb|ADX76384.1| formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius ED99] Length = 290 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 139/303 (45%), Gaps = 29/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + + + V D+ R F T G + Sbjct: 1 MPELPEVEHVKRGITPHIMHQKVIDVTFSEPVKRGKLEGKETIIKGIDLDAFVKYTVGFE 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I DV RR+KY+L + +I HLGM+G+F + + +H V L N Sbjct: 61 IADVQRRSKYILFRIENGNVERILISHLGMAGAFFVVQSLDDIAIPNFRKHWQVVFHLEN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + VE+ Y P + + + + N Sbjct: 121 G-----IKLVYSDIRRFGEIRNVESLEAYPSILEIAPEPFEQEALAYYLAKSDEKKYLNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ ++++G GNIY CEAL+ A++ P +K + L T KL + KVL Sbjct: 176 AIKPFILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSIAEKT------KLFNSVVKVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 I GG+S+ DYVH DG G Q+ VY + + C + C I ++ +GR+T +C Sbjct: 230 EMGILNGGTSVADYVHADGQRGTMQDHLKVYKQ--KRCAT-CETAIETVIISGRNTHFCP 286 Query: 286 YCQ 288 CQ Sbjct: 287 NCQ 289 >gi|283781572|ref|YP_003372327.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] gi|283440025|gb|ADB18467.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] Length = 284 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----HRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ T+ D+ L R + G KI + R Sbjct: 1 MPELPEVETMRRGILKA-TGATIVDVQLEPCARRPIAIKPSLAVVQKSLIGTKISAIERL 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +++ + +I+ M+G ++ + ++ + + + Y Sbjct: 60 GKRVVVRAGDDFHLILEPRMTGLVLVSDPPSREHLRLRI---------DLAGSVLPSIWY 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L T+ LGP+ S + + + + +K ALL+Q+I Sbjct: 111 WDRRGLGSIQLYRTAELEAQLLSGKLGPDALAISKDDFS--ARLKRTSRAIKVALLDQQI 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GN+Y E L A + P + L + L L ++ +VL AI GS+L Sbjct: 169 VAGVGNLYASEILHLAAIDPKCRANKLTRQQ------LDLLHDKMLEVLHTAILHEGSTL 222 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VY + EPC C I+RIVQA RSTF+C CQ+ Sbjct: 223 SDGTYRNALAQAGNYQNMHRVYDREHEPC-PTCLSPIQRIVQAQRSTFFCAACQR 276 >gi|162447217|ref|YP_001620349.1| bifunctional formamidopyrimidine-DNA glycosylase/dephospho-CoA kinase [Acholeplasma laidlawii PG-8A] gi|161985324|gb|ABX80973.1| bipartite protein: formamidopyrimidine-DNA glycosylase and dephospho-CoA kinase domains [Acholeplasma laidlawii PG-8A] Length = 452 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 23/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRRNL V++ + ++ ++ + + + F +G++I V R AKYL Sbjct: 1 MPELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSN-DASFETKLKGQRIHKVEREAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L ++ HL M G + ++ H HV +L++ + + Y D R Sbjct: 60 KFILDDYL-LVSHLRMEGKYFMDAPLNK-------HIHVVFNLSSG-----HTLSYEDTR 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV+ K Y + ++ + F++++ +K LL+Q I+ GI Sbjct: 107 KFGRFELVDIKYKDTYLKDIKGLAKD-PDTLDLNTFYSSFNQRSKTIKEILLDQSIIGGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +K+ P +K + ++ VL AI+ GG+++ + Sbjct: 166 GNIYANEILYLSKIHPAKKGFLISKDEAKTLLN------NSNLVLNKAIEMGGTTIDTFE 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ +V+GKTGE C CG I + GR T+ C CQ Sbjct: 220 SL-GHKGEFQQELNVHGKTGEIC-KVCGTKIIKFQLKGRGTYICPKCQ 265 >gi|330723666|gb|AEC46036.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycoplasma hyorhinis MCLD] Length = 278 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L+++ L + +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTVEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL ++G + ++S K HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRLNGKYFFNNSS-----KKEPHNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + + L ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPME--ISEEELFNKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ + P+ K + +N L + + +L+ +I+ GGS++ Y Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE------LKLIKKFATSILLKSIELGGSTINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 223 SSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|304373419|ref|YP_003856628.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] gi|304309610|gb|ADM22090.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] Length = 278 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L+++ L + +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTIEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL M+G + ++S K HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRMNGKYFFNNSS-----KKELHNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + + L ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPME--ISEEELFNKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ + P+ K + +N L + + +L+ +I+ GGS++ Y Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE------LKLIKKFATSILLKSIELGGSTINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 223 SSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|315656592|ref|ZP_07909479.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492547|gb|EFU82151.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 321 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 128/326 (39%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------- 94 K+L +G L++++HLGMSG +E K Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQGAPQHSRETR 120 Query: 95 --QHNHVTISLTNNTNTK--------KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGP 144 H + +L N + + P G + + + Sbjct: 121 LLPHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEHIAR 180 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + H +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 L KL+ + V+ A+ GG+S YV+ G+ G F VYG+ G+ C Sbjct: 241 DR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|315655501|ref|ZP_07908400.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315490156|gb|EFU79782.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 321 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 127/326 (38%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITELRTGLVGARLGAAVRR 60 Query: 57 AKYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-------------- 95 K+L EG L++++HLGMSG +E K Sbjct: 61 GKFLWFSLSGEVPSSEGPLALVIHLGMSGQLRVESRGATLHRKEAATSPQVAPQYSRETR 120 Query: 96 ---HNHVTISLTNNTNTK--------KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGP 144 H + +L N + + P G + + + Sbjct: 121 LLLHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPLGVEHIAR 180 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTRASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 L +L+ + V+ A+ GG+S YV+ G+ G F VYG+ G+ C Sbjct: 241 DR------KLRELLGAVAAVMGQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|296115226|ref|ZP_06833867.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] gi|295978327|gb|EFG85064.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 20/282 (7%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + + ++ + R+ LR+ FP + RG+ I RR KY+L+ L+ ++ Sbjct: 2 RGMRLHLEGHQIATATPLREGLRWPFPPGLGDSLRGRVIARFERRGKYILVHLDDGQVLL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSG ++ H + + +H H+ I + R DPRRFG +DL+ Sbjct: 62 MHLGMSGRVVLGHDTT---VPAARHEHLVIV-----TVQGARCGLVDPRRFGIVDLLAPG 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P L +GPEP N F+A+ L + S +K LL+Q++VAG+GNIYV EAL+R Sbjct: 114 TAMSHPLLARMGPEPLGNGFDAVGLARAARGRRSPIKALLLDQRVVAGLGNIYVSEALFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P R SL + L+ I+ VL +AI AGGSSLRDYV DG +GYFQ+ Sbjct: 174 AGVHPERAGASLDEAQ------CAALVASIRDVLTEAIAAGGSSLRDYVKPDGELGYFQH 227 Query: 252 AFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQ 288 A+ VYG+ G+ C C ++RIVQAGRS+F+C Q Sbjct: 228 AWRVYGREGQGCPDCPGLPQCAG-VQRIVQAGRSSFFCPRRQ 268 >gi|323490454|ref|ZP_08095661.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] gi|323395858|gb|EGA88697.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] Length = 289 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 28/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-----------KNLRFDFPHHFSAATRGKK 49 MPELPEVE + R + V + + + ++ F G + Sbjct: 1 MPELPEVEGVVRQIRPVSIGKKIEAVAVSDVIRLSKENGKEAIIKRIEADGFIKRLTGAQ 60 Query: 50 IIDVSRRAKYLLI--ELEGNLSIIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTNN 106 I+ V RR+KY+ + ++ HLGMSG++ + K +H H+ ++L++ Sbjct: 61 IVRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYVDQLQSIPEDKFRRHVHIVLTLSSG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + ++D RRFG M +++ + L P + + + KN Sbjct: 121 N-----LLAFSDIRRFGEMRVLQEEGDFPPLLLMAPEPFHESALEHFLTMAESPKYKNKA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K +++ +I++G GNIY EAL++ K+ P R + + +L + I +L Sbjct: 176 IKEIIMDGQIISGCGNIYATEALFKMKIHPKRAASRISRKRKV------ELFESIVAILQ 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++I AGGS++ DY I+G G QN F +YGK + C +CG + + GR++ YC Sbjct: 230 ESIRAGGSTISDYRDINGESGSMQNRFGMYGK--KQCA-DCGTATKTLKIGGRASVYCPT 286 Query: 287 CQK 289 CQK Sbjct: 287 CQK 289 >gi|257482980|ref|ZP_05637021.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 231 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 18/249 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ ++I HLGMSG+ + H HV I L + + Y DPR Sbjct: 61 LIQA-EVGTLISHLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRARYL------KLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYF 249 DG GYF Sbjct: 223 GGDGKPGYF 231 >gi|93117327|gb|ABE99581.1| fpg [Neisseria meningitidis] Length = 245 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 14/257 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYLLI + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQT-GVLL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + + +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCG 268 ++VYG+ +PC CG Sbjct: 230 EYTVYGRHNQPC-PQCG 245 >gi|89100042|ref|ZP_01172912.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] gi|89085276|gb|EAR64407.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] Length = 275 Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R+ L + + +T+ ++R+ P F + I + RRAK+L Sbjct: 7 MPELPEMETCRQLLGRQLTGLMITEAEINREKSINVPPAEFIRQVQNSTITSIDRRAKHL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++++HL + G + + V +S R +Y Sbjct: 67 IFRLSSGKNLLLHLMLGGWMYLGNDEDNPDRTK----QVILSF-------GSRKLYFIGL 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + PEP D F A KK LK +L+NQ +AGI Sbjct: 116 RLGYLHLLTAQELEKEFEELG--PEPLDPGFTAASFAQLLEKKRGMLKTSLVNQHFIAGI 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E +A L P+RK L + + +L ++ V +AI +GG Sbjct: 174 GNCYSDEICHQAGLLPMRKIEELSEMEKS------RLYPAMKTVFANAIQSGGYMDEPLF 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE CL CG I + + R TFYC CQ Sbjct: 228 KGDLITGGYNERCMVYDRKGESCL-RCGSQIVKEEISSRKTFYCPGCQ 274 >gi|85860946|ref|YP_463148.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] gi|85724037|gb|ABC78980.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] Length = 311 Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 28/288 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + + L +G+ I V+R K + Sbjct: 51 MPELPEVETLCRQLRQKVPHAKIKGTFILDSKL------GKLDNLKGRGIASVTRLGKRI 104 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ S+ +HL M+G + + + P H+ + LT R+I DPR Sbjct: 105 VLGLDDGRSLEIHLRMTGRLLWQ--EKPDIGEKPPHSRFILDLTPG------RIIIVDPR 156 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF + LV + K A L + ++ ++K+ L++Q I+ GI Sbjct: 157 RFATLSLVADAAK-------GNAAVDALKPGCPEALKEKGCNRSRSIKSFLMDQSIIGGI 209 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+RA L+P+R+T L + ++ + +VL A+ G+S+ D+ Sbjct: 210 GNIYACEILYRAGLNPLRRTADLTSEDW------RRVGSAMVEVLSKAVVCRGTSISDWR 263 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q VYG+ G+ C +CG +I+R+ GR T++C CQ Sbjct: 264 DLFGCKGEYQKELRVYGREGKKC-PHCGGIIQRVRLLGRGTWFCPNCQ 310 >gi|325963728|ref|YP_004241634.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469815|gb|ADX73500.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 321 Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 90/325 (27%), Positives = 152/325 (46%), Gaps = 49/325 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+ + + +R F+ G + D+ RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIEAVEVLDPRSIRRHALGAEDFTGNLEGATVADIVRRG 60 Query: 58 KYLLIELEGN--------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 K+L + L ++++ HLGMSG +++ + +H V L Sbjct: 61 KFLWMPLVHPAAAAEGQGSIGRPEVALMAHLGMSGQLLMQDRGVP----DEKHLKVRFRL 116 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDL--------------VETSLKYQYPPLRTLGPEPADN 149 + ++ + D R FG + + E+ L + +P D Sbjct: 117 S-PREGMPEQLRFVDQRIFGGLFVTSLVPTDDGGPGGLAESQLPLIAEEASHIARDPLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 +F+ + K+ + LK ALL+Q +V+GIGNIY EALWRA+L R T +L ++ Sbjct: 176 AFSFELFYRRLRKRKTGLKRALLDQGLVSGIGNIYADEALWRARLHFARPTDTLRRSE-- 233 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ G+PC C Sbjct: 234 ----AERVVDSAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGREGQPC-KRCA 288 Query: 269 -----QMIRRIVQAGRSTFYCTYCQ 288 IRR RS+ C CQ Sbjct: 289 AAGIHATIRRDQFMNRSSHTCPVCQ 313 >gi|261406219|ref|YP_003242460.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] gi|261282682|gb|ACX64653.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] Length = 273 Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +TD+ ++R+ F++A +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + + + + V I+ + +V+Y Sbjct: 61 IFHLHNGGRLLLHLMLGGILYLGRRDDEE--RPSRSTQVEITFGD-------QVLYFIGL 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 112 RLGYLHFLTARETEN--ALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P+ K P++ L +L KV+ +A D GG + Sbjct: 170 GNCYADEIAFDARIHPLSKI------QDLPEESLEQLYDSTVKVMHEATDGGGYMEMPFQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 224 EGDVLTGAYNDECKVYDREGEPCV-RCGTPIVKAEHASRKVFFCPNCQ 270 >gi|330685708|gb|EGG97347.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU121] Length = 290 Score = 155 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 131/304 (43%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + N T+ I + F T G Sbjct: 1 MPELPEVEHVKRGIEPFAVNTTINKITFSENVKKGKEDGRETIIKGMTLESFRRLTEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTN 105 I + RR+KY++ + +I HLGM+G F ++ H +H V L N Sbjct: 61 INQIERRSKYIVFYINRDAEQRILISHLGMAGGFFVVNHLEEINVPNYRKHWQVIFELDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++IY+D RRFG + V + Y P + + + T++ + Sbjct: 121 GK-----KLIYSDIRRFGEIRNVSSFDSYPSFLSIAPEPFDEEALQHFLDCTNKKNYSKK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ K+++G GNIY CEAL+RA + P R T+ L ++ VL Sbjct: 176 PIKQVILDHKVISGCGNIYACEALFRAGILPNRLTQELSNQEKEMVF------YHVRSVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GG+S+ DY H DG G Q +VY + CG I V A R++ YC Sbjct: 230 NEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKVCGHSIETQVIASRNSHYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 TCQK 290 >gi|293363949|ref|ZP_06610685.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] gi|292552439|gb|EFF41213.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] Length = 274 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ +L ++K +T + ++ K ++ +F + + I + KY Sbjct: 1 MPEYPEVTVVSNSLNELVKFKKITKVEVNLEKIIKNTDVKNFINSLENRVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +L +I HL M G F E+ + K H+ V + +N+ ++IYND Sbjct: 61 IIFSFDNDLKMISHLRMEGKFFYENFLSDRNKK---HDLVIFTFEDNS-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG MDLV + N +A + + K +K LL+Q IV G Sbjct: 113 RRFGTMDLV---QGDLSTFTKISKLANLPNPLDASKIMQKVKNKKIPIKTVLLDQSIVLG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P+ +++ ++Q + ++ + GGSS+ Y Sbjct: 170 IGNIYADEVLFASKINPLSPASNILLKEW------KLILQNAKDIMNQSTKQGGSSVNTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN VY + CL C + +I GR T +C CQK Sbjct: 224 GSVNNVQGTFQNELKVYNRATLACL-RCKNKLDKIKVNGRGTTFCAICQK 272 >gi|329930846|ref|ZP_08284245.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328934548|gb|EGG31053.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 272 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +TD+ ++R+ F++A +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + +P ++ V I+ + +V+Y Sbjct: 61 IFHLHNGGRLLLHLMLGGILYLGRRDEERPSRS---TQVEITFGD-------QVLYFIGL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 111 RLGYLHFLTARETEN--ALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P+ K P++ L +L K++ +A D GG + Sbjct: 169 GNCYADEIAFDARIHPLSKI------QDLPEESLEQLYDSAVKLMHEATDGGGYMEMPFQ 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 223 EGDELTGAYNDECKVYDRGGEPCV-RCGTPIVKAEHASRKIFFCPNCQ 269 >gi|71894461|ref|YP_278569.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] gi|71851249|gb|AAZ43858.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] Length = 281 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ ++L ++ + + L + + F K ++ K+ Sbjct: 1 MPEYPEVTVVCQSLSKLLLGKKINNCELLSEKFAKNSSVKDFEEFFNNKTFKKINNTGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + IVHL M G F I TS + + +H+H+ L N+ + YND Sbjct: 61 IEFIFDDKSRAIVHLRMEGKFFIRKTSDLEKYR-FKHDHIYFHLGNDET-----LAYNDS 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + K ++ L P + YL + ++K LL+QK+V G Sbjct: 115 RGFGSFETISKENKLSVKEIKNLANLP--KDVDIDYLYKKLQNTTRSIKTILLDQKLVLG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P+ K ++L + L L+ Q+++ ++I GGS++ Y Sbjct: 173 IGNIYADETLFASKIFPMEKAKNLSKAQ------LKTLMDNAQRIMDESIKLGGSTVHSY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI----VQAGRSTFYCTYCQ 288 ++G G FQ VYG+ CL CG ++++ Q GR T YC CQ Sbjct: 227 QSVNGIDGKFQQRLKVYGRAKLNCLE-CGSFVKKVKLDFKQNGRGTSYCPNCQ 278 >gi|317484387|ref|ZP_07943305.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] gi|316924362|gb|EFV45530.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] Length = 305 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 130/316 (41%), Gaps = 51/316 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA-- 57 MPELPEVE I R L ++ + L + P G I RR Sbjct: 11 MPELPEVETIARTLAPQVEGRRIVACELLNPSTFEGTIPLG---KVVGGVIGRPGRRGKL 67 Query: 58 -------------------------KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 + L E + HL M+G + Sbjct: 68 LLLPLAFGSDPLPPVDEACPSGSLARCLACGDERITGLGFHLKMTGRLFVYPAGTP---- 123 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 +H + L + + R+ ++D R+FG++ ++ S +P P + Sbjct: 124 PEKHTRLLFDLDDGS-----RLFFDDTRKFGYVRVLSPSSVSCWPFWN--SLGPEPLEMD 176 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 A F + +K LL+Q ++AG GNIY E+L+RA + P D Sbjct: 177 ADAFAACFAGRRGKIKALLLDQSVLAGCGNIYADESLFRAGIRP--------DAQLVSAD 228 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L +L +++VL+++IDA GSS+RDY G G FQNAF VYG++GE CL CG + Sbjct: 229 RLKRLHAALREVLLESIDACGSSIRDYRTARGDAGAFQNAFRVYGRSGETCLE-CGTPLE 287 Query: 273 RIVQAGRSTFYCTYCQ 288 AGR+T +C CQ Sbjct: 288 SCRIAGRATVFCPNCQ 303 >gi|304389334|ref|ZP_07371299.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327452|gb|EFL94685.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 87/326 (26%), Positives = 128/326 (39%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------- 94 K+L +G L++++HLGMSG +E K Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 95 --QHNHVTISLTNNTNTK--------KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGP 144 H V I+L N + + P G + + + Sbjct: 121 LLPHERVRITLDNGKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGMEHIAR 180 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + H +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTHASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 L KL+ + V+ A+ GG+S YV+ G+ G F VYG+ G+ C Sbjct: 241 DR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|26553653|ref|NP_757587.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] gi|26453659|dbj|BAC43991.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] Length = 277 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + +L N T+T+I + K + F+ ++I D++R+ K Sbjct: 1 MPELPEVQSVIDSLKEQGCLNRTITNIESIMPKIFKNCSYEDFTHYIINEQIKDITRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ L + +VHL M G E T + K H V I + + Y + Y+D Sbjct: 61 YLIFHLTNDKVFVVHLRMEGKLFFEKTDSSYDKK---HVLVKIEMDD------YEIRYHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + ++ LG +P + F+ YL + K N +K LL+Q+ V+ Sbjct: 112 TRRFGTFTIYNENNYLDSKEIKKLGLDPLEEEFDWKYLKNNIKKSNRAIKTTLLDQENVS 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ + + P L N+ K+ + + +L A++ G+++ Sbjct: 172 GIGNIYADEILFASSIHPETIANKLTDNDF------KKIAENSRIILAKAVENKGTTIAT 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G FQ V+ K C+ NC I +I GR T+ C CQK Sbjct: 226 YFFKKEQKGEFQKFLKVHTKKDFDCV-NCKNKIVKIKVNGRGTYLCLKCQK 275 >gi|218506631|ref|ZP_03504509.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli Brasil 5] Length = 246 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 115/247 (46%), Positives = 154/247 (62%), Gaps = 10/247 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEGGAASAMPGQFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDY 239 GSSLRD+ Sbjct: 239 GSSLRDH 245 >gi|298346955|ref|YP_003719642.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] gi|298237016|gb|ADI68148.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] Length = 321 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 128/326 (39%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGARLGAAVRR 60 Query: 57 AKYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------- 94 K+L +G L++++HLGMSG +E K Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 95 --QHNHVTISLTNNTNTK--------KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGP 144 H + +L N + + P G + + + Sbjct: 121 LLPHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEHIAR 180 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + H +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 L KL+ + V+ A+ GG+S YV+ G+ G F VYG+ G+ C Sbjct: 241 DR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|13508119|ref|NP_110068.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|2494594|sp|P75402|FPG_MYCPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1674146|gb|AAB96105.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|301633660|gb|ADK87214.1| DNA-formamidopyrimidine glycosylase [Mycoplasma pneumoniae FH] Length = 277 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + +H K L+ + A +D+ RR KY Sbjct: 1 MPELPEVATVITELKSCVLNKPVKQVKVHLDKVLKNTNVKQLNDALVNHSFVDIKRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E + H V + ++ Y+D Sbjct: 61 IIFCLSNGLFLVSHLRMEGKYFFEAKGSQFDL---NHVLVEFLFQDGD-----QLNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L L L +P D FN + ++ HK N +K +L+Q ++G Sbjct: 113 RQFGTFHLFNRYQFENARELNKLALDPLDQEFNHQAIFNKGHKSNKKIKTFILDQTNISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P ++L + + Q +L A++ G+++ + Sbjct: 173 IGNIYADEILFASKIHPETLAKNLNLSQ------YQLICQNATDILKKAVEMKGTTIGTF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +Q+ ++GK G+ C S C I + GR ++ C CQ Sbjct: 227 TFKKDHTGGYQHFLKIHGKKGKQCQS-CNTTIIKKKINGRGSYICEKCQ 274 >gi|313813553|gb|EFS51267.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA1] Length = 280 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|309810299|ref|ZP_07704137.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] gi|308435727|gb|EFP59521.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] Length = 350 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 92/349 (26%), Positives = 145/349 (41%), Gaps = 69/349 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNM-----TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L + VT + R++L P H + A G+++ R Sbjct: 3 MPELPEVEVVRRGLDDHVVGRAFVTSRVTGSRVARRHL--PGPQHLADALLGRRVASAQR 60 Query: 56 RAKYLLIELEG-----------------------NLSIIVHLGMSGSFIIEHTSCAKPIK 92 R KYL + E + ++++HLGMSG ++E Sbjct: 61 RGKYLWMTFEDAAPGSDGSADATVPLDRREGAVADDALVIHLGMSGQVLVESADSPLEKH 120 Query: 93 --------------NPQHNHVTISLTNNTNTKKYR--------------VIYNDPRRFGF 124 P+ + + + + D R FG Sbjct: 121 AHAVFDLSAPVKLSPPRKSGERAGSGEAVDAPGVTDASERPRSEPSAQQMRFVDQRTFGG 180 Query: 125 MDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 + L + + + + P+P + +F+A K+ +K LL+Q IV+GIG Sbjct: 181 LFLDDLTVAHGREVPASIAHIAPDPLEEAFDAGAAARLMRSKDVAIKRMLLDQGIVSGIG 240 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YV 240 NIY EALWRA++ R K L ++ Q V+ A+D GG+S YV Sbjct: 241 NIYADEALWRAQVHGRRPG------RMLTKTQLIGVLTAAQDVMRSALDHGGTSFDALYV 294 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++G+ GYF + YG+ G+PC CG +I R RS+ +C CQK Sbjct: 295 NVNGASGYFDRSLDAYGQQGKPC-RRCGTLIVREQFMNRSSHFCPTCQK 342 >gi|315646600|ref|ZP_07899718.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315278243|gb|EFU41563.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 272 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +T++ ++R+ F++ +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSIVNVPITNVVVNREKSLNVPVDEFTSVLKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + + P+ V I+ + +V+Y Sbjct: 61 VFHLHNGGRLLLHLMLGGILYLGRIDEER---PPRSTQVEITFGD-------QVLYFIGL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 111 RLGYLHFLTAKEAD--DALKELGPELLDRRMTKARFVQLIGKRRGALKTTLVNQQVVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P+ K + L + L +L KV+ +A D GG + Sbjct: 169 GNCYADEIAFDARIHPLTKIQDLSE------QSLEQLYDSTVKVMNEATDGGGYMEMPFQ 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + R F+C +CQ Sbjct: 223 EGDQLTGAYNDECKVYDREGEPCV-RCGTAIAKAEHTSRKVFFCPHCQ 269 >gi|222110042|ref|YP_002552306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] gi|254789435|sp|B9ME52|FPG_DIAST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221729486|gb|ACM32306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] Length = 271 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + + LR+ A G+++ V RR KY Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVGKP-LRWPLGTE-PAVLVGRRVCGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A+ H+H + + T + +DPR Sbjct: 58 LLLDLDEGLLLIHLGMSGSLRFARDLPAR----GAHDHFELITDHGT------LRLHDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + S L G EP F K + +K LL +V G Sbjct: 108 RFGAVVWAAGESDPRARKLLDGWGLEPLGEDFAFEAFHAGLRAKRTPIKQLLLAGTVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A + P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLAGIRPTTRACAIGPQR------ARRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G+FQ +VYG+ G C CG +R Q RST++C +CQ+ Sbjct: 222 SSADGSAGHFQLEANVYGRAGLQC-RQCGTPVRLSRQGQRSTYFCPHCQR 270 >gi|119964032|ref|YP_948195.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119950891|gb|ABM09802.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 320 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 48/324 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L ++ TVT + + +R F ++DV RR Sbjct: 1 MPELPEVEVVRRGLARWVRGRTVTGVDVLDPRSIRRHALGTEDFIGNLEHATVLDVVRRG 60 Query: 58 KYLLI-------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 K+L + + ++++ HLGMSG +++ + + +H V ISL+ Sbjct: 61 KFLWMPLVMSGVSDTEPADELPKVALMAHLGMSGQLLMQDP----VVPDEKHLKVRISLS 116 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLV--------------ETSLKYQYPPLRTLGPEPADNS 150 + ++ + D R FG + + ET L + +P D Sbjct: 117 -PADGMPEQLRFVDQRIFGGLFVTALVPTVDGGPGGLGETPLPEIAEEASHIARDPLDPY 175 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ + + + LK ALL+Q +++GIGNIY EALWRA+L R T +L + + Sbjct: 176 FSFDAFYRKVKGRKTGLKRALLDQGVISGIGNIYADEALWRARLHYARATDTLRRAD--- 232 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-- 267 +L++ ++ V+ A+ AGG+S YV+++G GYF + + YG+ GE C C Sbjct: 233 ---AERLVEAVKDVMNAALAAGGTSFDSLYVNVNGDSGYFARSLNAYGRAGELCG-RCEA 288 Query: 268 ---GQMIRRIVQAGRSTFYCTYCQ 288 +++R RS++ C CQ Sbjct: 289 IGLHSVMKREQFMNRSSYTCPVCQ 312 >gi|329768945|ref|ZP_08260371.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] gi|328836167|gb|EGF85849.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] Length = 286 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 133/300 (44%), Gaps = 27/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL------RFDFPH----HFSAATRGKKI 50 MPELPEVE I+ L +KN + + + FS GKKI Sbjct: 1 MPELPEVENIKLGLEDSLKNKKILSVTFSNTVKEGHDLNKMPIVKQSLIDFSNNVVGKKI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNT 109 ++SRR KYL + II H GM+G+F + + KN H HV L N Sbjct: 61 KELSRRGKYLYL-ALNKGYIITHFGMTGAFFLVNDIAEITNKNYYKHRHVIFELDTNE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 +++++D RRFG + VE +++ P + + K+ ++K Sbjct: 118 ---KLVFSDIRRFGELRYVEKIGEFKPFVNLAPEPFEKKAKQYFLDKLLEKKYKDQSIKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+ + G GNIY CE L+R ++ P+ K L L E+ +L AI Sbjct: 175 LLLDGNVFCGCGNIYDCEVLYRKRIHPLTKPCELTLKEK------EDLFDELVFILEWAI 228 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS++ DYVH DG G QN +YGK + C G + I GRS+ YC CQK Sbjct: 229 KEGGSTISDYVHADGGEGNMQNFHQIYGK--KKCPL--GHDVENINIKGRSSHYCPVCQK 284 >gi|332285378|ref|YP_004417289.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] gi|330429331|gb|AEC20665.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] Length = 258 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 93/275 (33%), Positives = 137/275 (49%), Gaps = 21/275 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M + + ++ +R+ P +A G K++ RR KYLLI + + I+HLGMS Sbjct: 1 MTGKQLKNFVVYEPRMRWPIPDGLAATISGHKVLSCERRGKYLLI-NFEHGTQIIHLGMS 59 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF--MDLVETSLKYQ 135 GS S A+ H+H + R + +DPRRFG Sbjct: 60 GSLRRVPASEARRK----HDHAEWIFDD------ARFLLHDPRRFGAVLWHDAAQGPVAN 109 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +P L LG EP D F + YL + + +K LL IV G+GNIY E+L+ A+++ Sbjct: 110 HPLLAKLGIEPFDAQFTSSYLYERLRGRTQAIKQTLLAGDIVVGVGNIYASESLFLARIN 169 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAFS 254 P SL + L+Q IQ L +A+++GGS+LRDYV+ G G YF + Sbjct: 170 PRTAAGSLSRAR------CQALMQAIQITLRNALESGGSTLRDYVNATGEPGAYFALHSA 223 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY K+G+PC C I+RI+Q R+T+YC CQ+ Sbjct: 224 VYEKSGQPCQL-CATPIKRIIQGQRATYYCPKCQR 257 >gi|299535475|ref|ZP_07048797.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] gi|298729236|gb|EFI69789.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] Length = 290 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 29/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-----------RFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + + P F + Sbjct: 1 MPELPEVEGVVQALKPTVEGRTIQQVKLSERVHFSFSEGKQCIVKQAEPDAFESTLSQMT 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEH-TSCAKPIKNPQHNHVTISLTN 105 I + RRAKY+ + ++ HLGM+G++ + + K +H H T + + Sbjct: 61 ITRIERRAKYIFFHLLKDDVPYVLVSHLGMTGAWFVVNSPEEINEAKFQKHIHATFEMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +IY+D RRFG + + T ++ P I + +N Sbjct: 121 G-----GYLIYSDIRRFGELRFLTTIEEHAPLTKMAPEPFDEHACDFFITKSKLPKYENK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +++ ++++G GNIY EAL+ K+ P RK L + L +EI VL Sbjct: 176 AVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMSRLSEKRK------RALFEEIVAVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I+AGGS++ DY +I+G G QN +YGK + C C ++ GR++ YC Sbjct: 230 RQSIEAGGSTISDYRNINGEAGSMQNRLKMYGK--KVC-PACETATSQMTIGGRTSVYCP 286 Query: 286 YCQ 288 CQ Sbjct: 287 NCQ 289 >gi|73662385|ref|YP_301166.1| formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494900|dbj|BAE18221.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 294 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK------NLRFDFPH-----HFSAATRGKK 49 MPELPEVE + R + +K + I K N R F TR Sbjct: 1 MPELPEVEHVTRGIKPFVKGQKIESILFSDKVQEGKANHRETIVKGMELDTFKRFTRLYT 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I+D+ RR+KY++ +I HLGM+G F + +H HV L N Sbjct: 61 IVDIERRSKYIVFYLEKDGDKRILISHLGMAGGFFVVDKLEDISVPNYRKHWHVIFKLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++Y+D RRFG + V + Y P + + + + +N Sbjct: 121 DK-----LLVYSDIRRFGEIRNVASFEAYPSFLEIAPEPFEKEAMAHYLAWFDKKLYQNK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +L+ ++++G GNIY CEAL+R+ + P R + L L +++VL Sbjct: 176 PIKQMILDHRVISGCGNIYACEALFRSGIHPARLPKDLNHQEREM------LFYYVREVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 I GG+S+ DY H DGS G Q +VY + CG I V A R++ +C Sbjct: 230 EAGIKYGGTSISDYRHADGSTGTMQQHLNVYK---QKVCKVCGDDIATQVIATRNSHFCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 TCQK 290 >gi|302036203|ref|YP_003796525.1| bifunctional DNA-formamidopyrimidine glycosylase/DNA lyase [Candidatus Nitrospira defluvii] gi|300604267|emb|CBK40599.1| DNA-formamidopyrimidine glycosylase and DNA-(apurinic or apyrimidinic site) lyase [Candidatus Nitrospira defluvii] Length = 287 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 142/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+ R L + TV D + R+++ + R KI V R+ K + Sbjct: 1 MPELPEAEVAARQLRERVVGATVRDCWIGREDIVREGLLSLEQY-RQAKITGVERKGKSV 59 Query: 61 LIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ LGM+G + TS K+P H H + L + + Y Sbjct: 60 ILHFLCGKEPRFLVAELGMTGLLLFRSTST----KHPHHTHFVLHLD---GCSEPDIRYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 +PRRFG + L++ + +Y R + + + + +L L++Q+++ Sbjct: 113 NPRRFGRLSLLDQAGLERYVARRFGYDPLTISHEQFLCVLRATRSRLKSL---LMHQQVI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ L P + + ++ + + +L Q + +VL +AI GGSS+R Sbjct: 170 AGIGNIYANEILFRSCLHPNQPSNTIPEK------SIVRLHQVMGEVLREAIAMGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY DG+ G +++ VY K GEPC + CG +I R RS+FYC CQ+ Sbjct: 224 DYFAPDGTEGQYKSRHLVYAKAGEPCPNACGTVICR-SVGERSSFYCPTCQR 274 >gi|269115161|ref|YP_003302924.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis] gi|118406894|gb|AAO39419.2| foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] gi|268322786|emb|CAX37521.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] Length = 275 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ + L + N +T++ +++ + +F P +F + R KKI + K+ Sbjct: 1 MPELPEVRVVVKALNNTILNKKITNLIIYKPKIFKEFSPQYFISILRDKKIEKIDNIGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + + K H ++N+ + + D Sbjct: 61 IIFFLSEKLVLLSHLRMEGKYRYYLNPPKEIDK---HLVARFVFSDNS-----ELHFLDK 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG L + PP+ P + L + +K LL+Q VAG Sbjct: 113 RLFGTYMLRNLENYNKIPPIS--LLGPEPKDIDIEALFKKIKNSKMPIKTKLLDQSFVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ +K+ P+ K L L +I+ +++ + + GG++L Y Sbjct: 171 IGNIYADEALFASKIHPLSKASDLSLEQ------LKDIIKNANEIMEKSYELGGTTLFSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G +Q+ +++ + + C CGQ ++ R T+ C CQK Sbjct: 225 ESLNKQEGKYQDFLNIHSDSIKKC-KVCGQKTLKLKVNQRGTYVCPNCQK 273 >gi|149173447|ref|ZP_01852077.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] gi|148847629|gb|EDL61962.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] Length = 282 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----LHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + ++ + D + + + V RR Sbjct: 1 MPELPEVETMVRGIREAVEGRKIKDFRNCPCPCKPISMKPGIKSIRTKALNQTVTSVRRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK ++++LE S ++ M+G ++ P H+ + T + + Sbjct: 61 AKRVILDLENGYSFVIEPRMTGLMLLSD--------PPDTGHLRLEWTLQKGRSSRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L+ + + LGP+ + A L + K + +K ALL+QK+ Sbjct: 113 WDRRGLGTVQLLSRKEQELVLGPQKLGPDALE--ITANELKQRLAKTSRAIKVALLDQKM 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L ++++ P R L + L + +Q++L AI GS+L Sbjct: 171 VAGIGNLYASEMLHQSRIHPERTADQLSTAE------IRSLHKAMQQILKTAIRYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D Y + G +QN VYG+ + C S G I RIVQA RSTF+C CQ Sbjct: 225 GDGTYRNALNQSGGYQNQHQVYGQEEKNCPSCKGAQIVRIVQAQRSTFFCPCCQ 278 >gi|311110325|ref|ZP_07711722.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] gi|311065479|gb|EFQ45819.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] Length = 254 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 84/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ ++ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPLSSAKA------IPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQN 251 +G IG +Q Sbjct: 226 DANGEIGGYQK 236 >gi|197294837|ref|YP_001799378.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] gi|171854164|emb|CAM12157.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] Length = 271 Score = 152 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 128/290 (44%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA--ATRGKKIIDVSRRAK 58 MPELPEV+II L + + + +F A K I+D+ R+ K Sbjct: 1 MPELPEVQIIVNILKSKLIGAKIIKTKVFYA----PVIKNFEAFSQIEEKTILDIQRKGK 56 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L L II HL + G ++ S + H + N+ + Y D Sbjct: 57 FLLFFLTQKLVIIGHLRLEGKLFLKPASNP----HEATEHFVLFFDND-----LSLRYYD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG ++ L L +P + + + + K + LK LLNQKI++ Sbjct: 108 FRKFGRFEVQNQKDFLTKTTLNQLASDPFE--IDFMTFYQKVVKSKTALKKVLLNQKIIS 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+ AKL P K L + + K KVL AI GGSS+ Sbjct: 166 GLGNIYVNEVLFLAKLHPETKACDLNPSQVQNILEIAK------KVLKKAIFFGGSSIST 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G+ G FQN V+GK PC + C I +I GR T+ C CQ Sbjct: 220 FEPEEGTKGSFQNHLLVHGKQKIPC-TVCMTNIIKIKVGGRGTYLCPSCQ 268 >gi|332528609|ref|ZP_08404591.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] gi|332041925|gb|EGI78269.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] Length = 275 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 139/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + LR+ A G+++ V RR KYL Sbjct: 1 MPELPEVEATRLSFADHIADARIVSAWQGLP-LRWPL-GIAPAQLVGRRVRGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ +++HLGMSGS + H+H + T + + NDPR Sbjct: 59 LLDLDE-GMLLLHLGMSGSLSFTDVAVHGTRPRGAHDH------FDLQTDRGLLRLNDPR 111 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + E+ L LG EP D SF A K+ S +K LL +V G Sbjct: 112 RFGAVVWAESEQAPIARKLLDGLGVEPLDESFEADAFHAALKKRRSAIKQVLLAGDVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + K +L I+ VL A+ AGG++LR+Y Sbjct: 172 VGNIYASEALFIAGIRPSLSAARIS------KPRAERLHAAIRDVLGRALAAGGTTLRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ VYG+ G PC + CG I+ + Q R+T+YC +CQK Sbjct: 226 SNAVGERGNFQFEAKVYGREGLPC-TVCGHPIKLMRQGQRATYYCVHCQK 274 >gi|251772775|gb|EES53337.1| Formamidopyrimidine DNA-glycosylase [Leptospirillum ferrodiazotrophum] Length = 279 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL----RFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE RR ++ V + I R+++ R F G +I+ RR Sbjct: 1 MPELPEVETTRRAILPVFTGRRIASITPLREDIWATGRRPPRGPF----TGGEIV---RR 53 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K L+ L + + + + L + + + Sbjct: 54 GKTLIFSLIPDKADRSSPPIFLLSRFGMSGRWDRRHQGSRPAPHTHLELLIPEEGVILAW 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +DPRRFG +++ + + + D L F + L+ AL N + Sbjct: 114 SDPRRFGRLEISPSPDESRLLAGTGPDALSLD----GPSLFEIFRPLATPLRKALTNPAL 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY+ E L+ A LSP R SL +L Q + ++L AID+GGS++ Sbjct: 170 LAGIGNIYMAEILFDAGLSPFRPAGSLSLAEAC------RLSQSLHRILSSAIDSGGSTI 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DGS G +Q +VYG+ G PC CG ++R RS +YC CQ Sbjct: 224 HSYRQEDGSPGGYQKFHAVYGREGSPC-RRCGLPLQRTTVEARSLYYCALCQ 274 >gi|227495871|ref|ZP_03926182.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] gi|226834548|gb|EEH66931.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] Length = 350 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 132/351 (37%), Gaps = 69/351 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + VT + + LR F G+++ RR Sbjct: 1 MPELPEVEAVRRGLERHLVGRVVTGVEVLEPRALRRQEGGVEAFIRGLAGRRLEAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK------------------------- 92 K+L + L+ ++ HLGMSG ++ T+ A + Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTAPATSARGQEPGPVGDAPAADAVVADPSVPRV 120 Query: 93 ----------------NPQHNHVTISLT-----------------NNTNTKKYRVIYNDP 119 P+H V + LT + R+ Sbjct: 121 DLTATRAPSLVRDLSVRPRHLRVRLHLTSREADPHPQAGAALDLVDQRMLGGLRLSEMVA 180 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 G + + + + D + + + + +K L++Q++V+G Sbjct: 181 TSDGASGGEGSPQPFLPQDAAHIARDLLDPAVDHDGVLARMRSSRRGVKALLMDQELVSG 240 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY E LW A++ RSL + +L++ +V+ A+ GG+S Sbjct: 241 VGNIYADEGLWAARVHAASPGRSLGPR------VGRRLLEATAEVMRRALKVGGTSFDAL 294 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G+ G+F YG+ G+ C CG ++R V RS +C CQ+ Sbjct: 295 YVDAEGAAGFFARELEAYGRAGQEC-RRCGATMQRQVIGARSHTFCPRCQR 344 >gi|304404451|ref|ZP_07386112.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] gi|304346258|gb|EFM12091.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] Length = 271 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + T+T + R+ P F A G+ + V RR K+L Sbjct: 1 MPELPEMETYRNMLSERIAGRTITAASVTREKTVNLNPDEFVQALIGRVVWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ I++HL + GS V + L+ + ++ Sbjct: 61 LLHLDDGRRIVIHLMLGGSLYYGDEEDRPDRT------VQVELSFGAHK-----LFGIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + PEP D F K LK++L++Q +AGI Sbjct: 110 RLGYVHLLTAKEAIERFEELG--PEPLDPRLTVDKFKLLFKGKRGALKSSLVDQHTIAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + +L +L + +Q VL +A GG + Sbjct: 168 GNCYADEICFVASIRPSTRIPALKDEEW------ERLFRAMQSVLREATANGGYMEDPFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GEPC + CG I + + + FYC CQ Sbjct: 222 KGDTLTGGFNSLCRVYDRGGEPC-TQCGTAIVQAEVSSKKVFYCPSCQ 268 >gi|282854596|ref|ZP_06263931.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|282582178|gb|EFB87560.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|314966092|gb|EFT10191.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA2] gi|314981863|gb|EFT25956.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA3] gi|315090789|gb|EFT62765.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA4] gi|315094942|gb|EFT66918.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL060PA1] gi|315104263|gb|EFT76239.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA2] gi|327328031|gb|EGE69800.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 280 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|314923851|gb|EFS87682.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL001PA1] Length = 280 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VIHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|251796642|ref|YP_003011373.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] gi|247544268|gb|ACT01287.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] Length = 271 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 119/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L ++ +T + R F A G+ I V RR K+L Sbjct: 1 MPELPEMEHYRLRLSELIIGSPITGTEVTRDKSINISAEQFEAELVGRTIWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ +++HL + G+ ++ + + VTI +Y Sbjct: 61 LFHLDNGKRLVLHLMLGGTLFF----GSEEERPDRTVQVTIRFATGN-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + P+P D +F+KK LK AL++Q +++GI Sbjct: 110 RLGYLHFMSVKEADAKLSELG--PDPFDKRLTLERFKARFNKKRGALKTALVDQHVLSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + AK+ P K SL ++ + + VL +AI GG + Sbjct: 168 GNCYADEIAFAAKIRPDAKIPSLTDE------TWERVYESMHSVLKEAISKGGYMEQPLT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC CG I + + R F C CQK Sbjct: 222 AGDAITGGYNDHCQVYDRGGEPCF-VCGTAIEQFEISSRKAFVCPVCQK 269 >gi|296122878|ref|YP_003630656.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] gi|296015218|gb|ADG68457.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] Length = 301 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 81/296 (27%), Positives = 126/296 (42%), Gaps = 16/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + ++ + + + R G+ I V R Sbjct: 1 MPELPEVETMVRGVRSALERHRLVALRILDTAYRSLTILPDERTVCERVAGQVIQRVWRL 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK--YRV 114 K ++++ ++ + M+G ++E A+ ++ S + T K V Sbjct: 61 GKRVVLDFSDGSTLTIEPRMTGLMLLEDPPSAEHLRLEFRLAPAGSHGSPTKGKGKSTSV 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R G + L + P S A K + +K A+L+Q Sbjct: 121 WFWDRRGLGTVTWRPPGELE--KLLSSHQIGPDALSLAAEGWKAALGKTSRPVKVAMLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+VAG+GN+Y E L RA +SP+ + L +L +++L AI GS Sbjct: 179 KLVAGVGNLYASEILHRAGISPLSASSQLHPEEW------ERLANAARQILELAIQYEGS 232 Query: 235 SLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +L D Y + G +QN VY K GE C + +I RIVQA RSTFYC +CQ Sbjct: 233 TLSDGTYRNALNKSGGYQNEHLVYAKAGEVCSTCRSGVILRIVQAQRSTFYCEHCQ 288 >gi|126651390|ref|ZP_01723597.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] gi|126591919|gb|EAZ86002.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] Length = 290 Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 29/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-----------RFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + + P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSERVHFSFSEGKQCIVKQAEPDAFELTLSEMT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFIIEH-TSCAKPIKNPQHNHVTISLTN 105 I + RRAKY+ L + V HLGM+G++ + + K +H H T + + Sbjct: 61 ITKIERRAKYIFFHLFKDEVPYVLVSHLGMTGAWFVVNSPEDIDEAKFQKHIHATFKMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +IY+D RRFG + + + P I + +N Sbjct: 121 G-----GYLIYSDIRRFGELRFLAKIEDHVPLTKMAPEPFDELACDFFITKSTLPKYENK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +++ ++V+G GNIY EAL+ K+ P RK + + L +EI VL Sbjct: 176 AVKEVIMDGQVVSGCGNIYATEALFAQKIHPARKMNRISEKRK------RALFEEIVAVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I+AGGS++ DY +I+G G QN +YGK + C C ++ GR++ +C Sbjct: 230 RQSIEAGGSTISDYRNINGEAGSMQNRLKMYGK--KIC-PACETATSQMTIGGRTSVFCP 286 Query: 286 YCQ 288 CQ Sbjct: 287 NCQ 289 >gi|116671046|ref|YP_831979.1| formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116611155|gb|ABK03879.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 326 Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 52/329 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+T + + +R F+ G +++DV RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTITSVDVLDPRSIRRHALGAQDFTGNLEGSRVLDVVRRG 60 Query: 58 KYLLI-------------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 K+L + ++++ HLGMSG +++ + + + +H Sbjct: 61 KFLWLPLEEAAAVQPGTDGIPAAGTSRPRVALMAHLGMSGQLLMQDS----VVPDEKHLK 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLV--------------ETSLKYQYPPLRTLGP 144 V + L+ + ++ + D R FG + + E + + Sbjct: 117 VRLRLS-PAHGMPEQLRFVDQRIFGGLFVTSLVPTADGGPGGLGEVPEPFIAEEASHIAR 175 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 +P D F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T +L Sbjct: 176 DPLDPYFSFDSFYRRLRSRKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTETLR 235 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 + + +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ + C Sbjct: 236 RADAL------RVLDAAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGRENQEC 289 Query: 264 LSNCGQMI----RRIVQAGRSTFYCTYCQ 288 I +R RS++ C CQ Sbjct: 290 KRCAAAGIVSLMKREQFMNRSSYTCPVCQ 318 >gi|85057347|ref|YP_456263.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789452|gb|ABC65184.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] Length = 276 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+II L + + + + + F I+D+ R+ K+L Sbjct: 1 MPELPEVQIIVDFLKTQLIGKKIVATKVFYEPTVKNT-KEFQK-IEQTTILDIQRKGKFL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L L +I HL M G I+ K H + S+ K + Y D R Sbjct: 59 LFFLTQELVLIGHLRMEGKLFIKPCDEPK------HKYEHFSIILGD---KSSLRYYDFR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ ++ L L +P + N ++L + K S LK LLNQKI++G+ Sbjct: 110 KFGRFEVKNQNIFLTQTTLHQLALDPFE--INPVFLYQKILKTKSALKKVLLNQKIISGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ KL P K L + +++ QKVL AI GG+++ + Sbjct: 168 GNIYVNEVLFLVKLHPETKACELSLKQ------VQEIVTISQKVLAKAIKLGGTTVSTFE 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G IGYFQN V+GK +PC+ NC I +I GR T+ C CQ Sbjct: 222 SQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPICQ 268 >gi|327541806|gb|EGF28318.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 300 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 23/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH----RKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISP-IVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +++ + +++ M+G ++ +P H + I + N R Sbjct: 60 GKRVMLCFDDQSRLVIEPRMTGLVLLADP------PDPDHLRLRIQFRSPHNGSTMRSRE 113 Query: 117 NDPRRFGFMDL----VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + + Y P S A L +K ALL Sbjct: 114 IPTEMLVWDRRGLGTIRWMTERDYLEKVDSRLGPDAMSITAEQLRENLAASKRPIKVALL 173 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q VAGIGN+Y E L+ A + P + L + ++ I VL DAI+ Sbjct: 174 DQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQW------ERIHPAITLVLQDAINHE 227 Query: 233 GSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C CQ+ Sbjct: 228 GSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGCQR 286 >gi|94987079|ref|YP_595012.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] gi|94731328|emb|CAJ54691.1| Formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] Length = 279 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L ++ + ++ ++ G RR K L Sbjct: 1 MPELPEVETIVRTLEPIINGRMCLNYTVYNQDSVQGDIS--LDVLIGAIFGKPFRRGKLL 58 Query: 61 ----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +I+ ++ +HL M+G ++ H V+ SL + + + Sbjct: 59 LIPLVIKDSHVYTLCIHLKMTGRILVYPQDRC----PTTHTRVSFSLDDGNT-----IFF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG++ ++ T+ + +P TLGPEP + + +F + N+K+ LLNQ++ Sbjct: 110 EDIRKFGYVRILSTTEEPVWPFWNTLGPEPLE--IDVSTFIERFRGRRGNIKSLLLNQRV 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG GNIY E+L+RA++SP+ L + L +Q+VL++AI + GSS+ Sbjct: 168 IAGCGNIYADESLFRAQISPMATVSQLSME------SIATLYHALQEVLLEAIASCGSSI 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DY DG++G FQN+ +VYG+ G+PC+ C + + GR T +C+ CQ Sbjct: 222 KDYRAADGNVGAFQNSLNVYGRFGKPCV-VCKKDLEGTRIGGRMTVWCSSCQ 272 >gi|93117335|gb|ABE99585.1| fpg [Neisseria meningitidis] Length = 239 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 135/252 (53%), Gaps = 13/252 (5%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + ++ TV + L + LR+ G++++ RRAKYL++ + +++ Sbjct: 1 GIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQT-GILLI 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E + Sbjct: 60 HLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGT-----VMRYRDPRKFGAILWYE-GI 113 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EEHHPLLEKLGPEPLLEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFRA 173 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 GISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQE 227 Query: 253 FSVYGKTGEPCL 264 ++VYG+ +PC Sbjct: 228 YTVYGRHNQPCP 239 >gi|327334307|gb|EGE76021.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 280 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|239917410|ref|YP_002956968.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414104|ref|ZP_06245846.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838617|gb|ACS30414.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 305 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 28/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPE E++RR L + ++ + P RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRSPGGADALRERLRGARLAEPARRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + EG+ +++VHLGMSG +++ A VT + + + Sbjct: 61 KFLWLPLAEGDDAVVVHLGMSGQILVDEPGAADQRHLRLRLPVTA-----ADGSARELRF 115 Query: 117 NDPRRFGFMD------LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG + + +P F+ + + ++ S LK A Sbjct: 116 VDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPAAVHARLARRRSTLKRA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A++ Sbjct: 176 LLDQSLVSGIGNIYADEALWGARLHPERPTERMRRADTL------RLLAAVQDVMRRALE 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYC 284 GG+S YV++DG GYF + + YG+TG+PC C I R R++ C Sbjct: 230 VGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPC-RRCAAEGVDSRIVREPFMNRASHLC 288 Query: 285 TYCQ 288 CQ Sbjct: 289 PRCQ 292 >gi|311113799|ref|YP_003985021.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] gi|310945293|gb|ADP41587.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] Length = 332 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 57/335 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + + +++R F+ +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVRILDERSIRRHIGGSADFTTCLERTRIRGAYRRG 60 Query: 58 KYLLI-----------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + + ++++HLGMSG +++ +H + Sbjct: 61 KYMWLTLSAPEDEPFPKRGDSDDTLLPYALVIHLGMSGQLLVKTPEFP----AEKHLKIV 116 Query: 101 ISL---TNNTNTKKYRVIYNDPRRFGFMDLVE-----------------TSLKYQYPPLR 140 + L + K + + D R FG M L + + Sbjct: 117 LELEPADGESTNKATELRFVDQRIFGGMFLSNLVPDIPAGTSSAGAEEISEEFLVPEAVE 176 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 +G +P D SF+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + Sbjct: 177 HIGRDPVDPSFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAKPA 236 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKT 259 +SL +L + +VL +A+ AGG+S YV+++G GYF + + YG+ Sbjct: 237 KSLSAAQT------RELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYGRA 290 Query: 260 GEPCLSNC-----GQMIRRIVQAGRSTFYCTYCQK 289 GEPC C +I R RS++ C +CQ+ Sbjct: 291 GEPC-RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 324 >gi|33567483|emb|CAE31396.1| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] Length = 243 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 125/260 (48%), Gaps = 21/260 (8%) Query: 33 LRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 +R+ P G+ +++ RR KYLL+ + IVHLGMSGS + Sbjct: 1 MRWPIPPALPDLLAGRTVLECGRRGKYLLLR-FDHGVQIVHLGMSGSLR----RVPEQEA 55 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF--MDLVETSLKYQYPPLRTLGPEPADNS 150 +H+HV + + +DPRRFG E +P L LG EP D Sbjct: 56 PRKHDHVDWVFDH------AVLRLHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPR 109 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ +L F + +K ALL V G+GNIY E+L+RA + P + + Sbjct: 110 FDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESLFRAGIDPRTAAQRVSAAR--- 166 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQ 269 +L I+ L DA+D+GGS+LRDYV G G YF +VY + G PC CG Sbjct: 167 ---CDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAAVYERAGLPC-RVCGT 222 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 IRR+VQ R+T++C CQK Sbjct: 223 PIRRLVQGQRATYFCPSCQK 242 >gi|241888677|ref|ZP_04775984.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] gi|241864700|gb|EER69075.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] Length = 285 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 91/302 (30%), Positives = 134/302 (44%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD------ICLHRKNLRFDFPHH----FSAATRGKKI 50 MPELPEVE I+ L V+ N + + + K + FS + +GK+I Sbjct: 1 MPELPEVENIKFGLEEVVINKKIINITYSKVVEDSHKVGKMAIVKQKLSAFSDSVKGKEI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNT 109 +SRR KYL L II H GM+G+F + KN H HV L+ Sbjct: 61 EKLSRRGKYLYFTLNE-GYIITHFGMTGAFFLVKDIAEITNKNYYKHQHVIFELSTGE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 +++Y+D RRFG + ++ K++ P + + + ++K Sbjct: 118 ---KLVYSDIRRFGELRYIDDITKFKPFINLAPEPFDKKAKKYFLSKLEENKYREQSIKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL + G GNIY CE L+R K+ P+ K L + L +E+ +L AI Sbjct: 175 LLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKK------ESLFKELIDILDFAI 228 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--GQMIRRIVQAGRSTFYCTYC 287 GGS++ DYVH DG G QN +YGK C G + + GRS+ +C C Sbjct: 229 KEGGSTISDYVHADGGEGNMQNFHQIYGK------KVCPLGHEVENVTIKGRSSHFCPIC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|32474898|ref|NP_867892.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32445438|emb|CAD75439.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 300 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 118/299 (39%), Gaps = 23/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH----RKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISP-IVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +++ + +++ M+G ++ +P H + I + N R Sbjct: 60 GKRVMLCFDDQSRLVIEPRMTGLVLLADP------PDPDHLRLRIQFRSPHNRSTMRSRE 113 Query: 117 NDPRRFGFMDL----VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + + Y P A L +K ALL Sbjct: 114 IPTEMLVWDRRGLGTIRWMTERDYLEKVDSRLGPDAMCITAEQLRANLAASKRPIKVALL 173 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q VAGIGN+Y E L+ A + P + L + ++ I VL DAI+ Sbjct: 174 DQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQW------ERIHPAITLVLQDAINHE 227 Query: 233 GSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C CQ+ Sbjct: 228 GSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGCQR 286 >gi|297622481|ref|YP_003703915.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] gi|297163661|gb|ADI13372.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] Length = 267 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 24/281 (8%) Query: 10 IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS-AATRGKKIIDVSRRAKYLLIELEGNL 68 +RR L ++ + L P + G++I+ V+RR K+L++ L G Sbjct: 1 MRRELEPYVRGRVILAATLVDAP---PGPKYARLERAVGQRILAVTRRGKFLILPLSGGD 57 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 +I+HLGM+G P P+H V + L+ + + D RRFG +V Sbjct: 58 DLIIHLGMTGIL--------SPEPAPKHVRVRLELSEG-----GALYFRDARRFGRFLVV 104 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + P L +GPEP +F L + + +K LL+QK V+G+GNIY EA Sbjct: 105 PSGAYEALPTLSAMGPEPLSAAFTGDALYRALQRSRTPIKPFLLSQKPVSGVGNIYADEA 164 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 LWRA++ P+ + + +L I++VL ++ A G++L+DY ++G +G Sbjct: 165 LWRARIHPLTPANEVSRA------KAAQLAGAIREVLAASLRAKGTTLQDYRTVNGEVGA 218 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + YG+ +PC CG +R++ GR T +C CQ+ Sbjct: 219 YALQLQAYGRAEKPC-PRCGSPLRKVTLGGRGTHFCARCQR 258 >gi|169829548|ref|YP_001699706.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] gi|168994036|gb|ACA41576.1| Formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 29/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-----------RFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + + P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSERVHFSFSEGKQCIVKQAEPDAFELTLSEMT 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEH-TSCAKPIKNPQHNHVTISLTN 105 I + RRAKY+ E ++ HLGM+G++ + + K +H H T + + Sbjct: 61 ITKIERRAKYIFFHLLKDEVPYVLVSHLGMTGAWFVVNSPEDINEAKFQKHIHATFKMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +IY+D RRFG + + + P I + N Sbjct: 121 G-----GYLIYSDIRRFGELRFLAKIEDHIPLTKMAPEPFDELACEFFITKSTLPKYANK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K +++ ++++G GNIY EAL+ K+ P RK + + L +EI VL Sbjct: 176 AVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMNRISEKRK------RALFEEIVAVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I+AGGS++ DY +I+G G QN +YGK + C C ++ GR++ +C Sbjct: 230 RQSIEAGGSTISDYRNINGEAGSMQNRLKMYGK--KIC-PACETATSQMTIGGRTSSFCP 286 Query: 286 YCQ 288 CQ Sbjct: 287 NCQ 289 >gi|222151603|ref|YP_002560759.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] gi|222120728|dbj|BAH18063.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-----------LRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + + DI ++ F Sbjct: 1 MPELPEVEHVKRGIEPQITGERIIDIHFSDAVSNGKTQGKETIVKGLSLDAFKERCIDTH 60 Query: 50 IIDVSRRAKYLLIE---LEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN 105 I V RR+KY++ + +GN ++ HLGM+G++ + + +H HVT +L++ Sbjct: 61 IESVMRRSKYIIFKLKGKDGNRYMVGHLGMTGAYFVVPSIDDITVPNYKKHWHVTFTLSS 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +++Y+D RRFG + +++ S + P + + I H ++ Sbjct: 121 -----SMKLVYSDIRRFGELRMLDESQFAHFDATIAPEPFSEEGRAHYISALHLPKYQDK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K ++ +V+G GNIY CEAL A ++P + L + T L + I VL Sbjct: 176 PIKQVIMLHSVVSGCGNIYACEALHNAGINPNITVKKLSEKRRT------LLYEHIVDVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + I GGS++ DY + G G QN F VYGK + C + CG I+ V A R+T YCT Sbjct: 230 NEGILYGGSTISDYRNAQGESGTMQNRFKVYGK--KICGT-CGNEIKTKVIATRNTHYCT 286 Query: 286 YCQK 289 +CQK Sbjct: 287 HCQK 290 >gi|327439257|dbj|BAK15622.1| formamidopyrimidine-DNA glycosylase [Solibacillus silvestris StLB046] Length = 290 Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-----------KNLRFDFPHHFSAATRGKK 49 MPELPEVE + R+L +++ T+ + L ++ P F R K Sbjct: 1 MPELPEVEGVVRDLRPIVEGKTIKSVSLSDVVYTSHEAGKQAIVKNAKPSQFELLVRDMK 60 Query: 50 IIDVSRRAKYLLIELEGNLSII---VHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTN 105 I + RR+KY+ L+ + HLGMSG++ + K +H H +L + Sbjct: 61 IDKLERRSKYIFFHLKKDDERFILVNHLGMSGAWFVVTDVLEITEEKFRKHIHAIFTLAS 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++Y D RRFG + ++ + P I + + Sbjct: 121 GE-----LLVYADIRRFGELRFIKEIADHPPLLKMAPEPFDEIACDFFIMQSEKPKFAKK 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K +++ ++++G GNIY EAL++ + P + T L + T L + I VL Sbjct: 176 SIKEVIMDGQVISGCGNIYATEALFKMLIHPGKATNELSREQKTM------LFRVICDVL 229 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 ++ID+GGS++ DY I+G G Q+ +YGK + C+ C +V AGR++ YC Sbjct: 230 QESIDSGGSTISDYRSINGGAGTMQHRLKMYGK--KQCV-VCETNTESLVIAGRTSTYCP 286 Query: 286 YCQK 289 CQK Sbjct: 287 QCQK 290 >gi|328465599|gb|EGF36828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 1816] Length = 229 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 17/245 (6%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G++I V RR K+LL +L +I+ HL M G F + + + +H H+ Sbjct: 2 LVGQEIEGVRRRGKFLLFDLTNC-TILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFE 56 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 ++T + + D R+FG M++ + + ++ LGPEP +F + K + Sbjct: 57 DHT-----ELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTS 111 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K ALL+QK+VAG+GNIY E + AK+ P R SL + ++ + + + Sbjct: 112 RAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSI 165 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + +A+ GGS++R YV+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C Sbjct: 166 MTEAVALGGSTVRTYVNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFC 224 Query: 285 TYCQK 289 CQK Sbjct: 225 PNCQK 229 >gi|295835423|ref|ZP_06822356.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] gi|197696491|gb|EDY43424.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] Length = 287 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 118/290 (40%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T + + L+ P +A G ++ V R K+ Sbjct: 1 MPELPEVEALRDFLDTHLVGRTPARVLPVAVSVLKTYDPP--PSALVGHEVTAVRRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + +G ++ HL +G + A P K + + + L + + + Sbjct: 59 LALGTDGGPHLVTHLARAGWLRWQDEVPAAPPKPGRGPLALRLVLDDGSGFD-----LTE 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + T+ P + LGP+P F+ + LK AL +Q +VA Sbjct: 114 AGTQKRLAVYVTADPMTVPGIARLGPDPLAPGFDRAAFAALLRGERRQLKGALRDQSLVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP + L + +L + ++ L +A+ Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETD------RLYEALRTTLTEAVTRSRGIAAG 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + A S YC CQ Sbjct: 228 RLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|149180839|ref|ZP_01859341.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] gi|148851358|gb|EDL65506.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] Length = 270 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + L + N ++++ + R+ F+ + + I V+RRAK+L Sbjct: 1 MPELPEMENYKNLLSERILNKQISEVEIGREKSINVPVDEFTHLVKNRTIKKVTRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ ++ +++HL + G ++ K + + +S + +Y Sbjct: 61 LFHLDNDVVLLLHLMLGGWMFY----GSEQEKPDRTIQIRLSF-------GIQHLYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L + + LGPEP F+ K+ +LK L+NQ+ +AGI Sbjct: 110 RLGYLHLYKDLDEAAKELDD-LGPEPITPPFSVEQFLDLAGKRRGSLKTTLVNQRFLAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P RK L Q+ +L Q +Q +L DAI +GG Sbjct: 169 GNCYSDEICFHAAIMPGRKFNELSQHET------RQLFQSMQFILNDAIASGGYMEEPLF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC+ CG I + + + TFYC CQK Sbjct: 223 PGDNLTGGYNSKCRVYDREGEPCI-RCGSQIIKDKISSKKTFYCGNCQK 270 >gi|229543047|ref|ZP_04432107.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] gi|229327467|gb|EEN93142.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] Length = 267 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + L ++ T+T+ + R+ F A +KI +SR AKYL Sbjct: 1 MPELPEMETYKTWLASLIGGRTITNAMIQREKSINIPAGKFMKAVTNQKIQSISRCAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +LE +++HL + G + K + + +S + R ++ Sbjct: 61 IFQLENGSCLLLHLMLGGWMFF----GKEEDKPDRTIQIQLSFGD-------RHLFFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ +GPE D F L + ++ LK L NQ+++AGI Sbjct: 110 RLGYLHLLTPEAVQAEF--EKIGPELLDLHFTLAVLQQRMQQRRGILKTVLTNQEVLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A+L P +K L +L + I+ +L I+ GG Sbjct: 168 GNRYSDEILWHAQLRPDQKAG------HLDNQQLARLYESIRFILQKGIEQGGYMEHPLH 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q V+G+ EPC C IR+ + T++C YCQ Sbjct: 222 KGDGKTGCYQ--MYVHGREDEPC-PRCSTPIRKKEISSHKTYFCPYCQ 266 >gi|313665519|ref|YP_004047390.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] gi|312949704|gb|ADR24300.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] Length = 274 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINRTIIKSEIFSNKIVSSISVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ II HL M+G ++IE K+ L NN + D Sbjct: 61 IVFELKE-YVIISHLRMTGKWVIEDPEQYAYKKSWLK--AEFLLDNN-----LVARFYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLTNANLITKDQT------KEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +QN V+ + C C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQNKLFVH-LNNKNC-KLCNTKISKIKVNGRGTYYCSNCQK 274 >gi|21219464|ref|NP_625243.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|6580659|emb|CAB63194.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 287 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G ++ V R K+L Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPPLTA-LEGHRVAAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E G ++ HL +G + + + K + + Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALETGAGFDL----TEAG 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + Q P + LGP+P F+ + LK AL +Q ++AG+ Sbjct: 116 TQKRLAVYVVADPRQVPGVARLGPDPLAADFDEARFAALLDGERRQLKGALRDQSLIAGV 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP + SL +L ++ L +A++ + Sbjct: 176 GNAYSDEVLHAAKMSPFKLAASLTDEET------ARLYAALRDTLTEAVERSRGIAAGRL 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 230 KAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|86156705|ref|YP_463490.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773216|gb|ABC80053.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 280 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 136/300 (45%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARAVEGARFAGIRRIG 60 Query: 58 KYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ + ++ HLGM+G +++ P+H + L + + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLRAAGDP----APRHARAWLRLEGD-----GVL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + + P + LGP+P ++ + L LK LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFDEVPEVAALGPDPLEDGIDPAALAGALAASRLPLKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA+L P R +R+L + L I +DA Sbjct: 172 RLLPGVGNIHASEACYRARLDPRRPSRTLSRAG------AKALAAGILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C IRRIVQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPIRRIVQAQRSTFFCPRCQR 280 >gi|256789490|ref|ZP_05527921.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289773384|ref|ZP_06532762.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289703583|gb|EFD71012.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 287 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G ++ V R K+L Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPPLTA-LEGHRVAAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E G ++ HL +G + + + K + + Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALETGAGFDL----TEAG 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + Q P + LGP+P F+ + LK AL +Q ++AG+ Sbjct: 116 TQKRLAVYVVADPRQVPGVARLGPDPLAADFDEARFAALLDGERRQLKGALRDQSLIAGV 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP + SL + +L ++ L +A++ + Sbjct: 176 GNAYSDEILHAAKMSPFKLAASLTDDET------ARLYAALRDTLTEAVERSRGIAAGRL 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 230 KAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|153003174|ref|YP_001377499.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026747|gb|ABS24515.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 276 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 27/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 MPELPEVEI RNL + I R+ F P F+ G + + R Sbjct: 1 MPELPEVEIAARNLRRWTMGRRIERIE-PDPKARYVFRPATPTAFARGLEGARFGPIRRI 59 Query: 57 AKYLLIELEGNLSIIV---HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+LL+ ++ + + + HLGM+G ++ A + + L + Sbjct: 60 GKHLLVSMKKDGAPVGLLAHLGMTGKWLRREGDAA----PSRFSRARFHLDDGA-----V 110 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + ++D R FG + +V + + + LGP+P + + L + +K +++ Sbjct: 111 LHFDDMRLFGRLRVVPGARFEEVREIAELGPDPLEQGIDLDRLAEALGRSRLAVKVRIMD 170 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++ G+GNI E+L+ AK+ P R+ RSL + KL I + + I Sbjct: 171 QALLPGVGNIVASESLFLAKIDPRRQARSLTPAE------VRKLADGILATVKETIARED 224 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV GS +N F VY + GE C I R+VQA RST+YC CQ+ Sbjct: 225 SPEISYVEEPGS----ENPFLVYAREGERCPRCRRAEIVRVVQAQRSTYYCPRCQR 276 >gi|218282128|ref|ZP_03488427.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] gi|218216921|gb|EEC90459.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] Length = 273 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 82/291 (28%), Positives = 132/291 (45%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K++++ D+ ++ + + F G+ +R KY Sbjct: 1 MPEAPEVQTVLSTLETQIKDISIEDVLIYYPKIVDNVEVETFKHRLIGQSFRTFNRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + ++VHL M G F + C H HV L N + Y+D Sbjct: 61 LIF-GLDDYDLVVHLRMEGKFYLYDKICEDK-----HIHVVFKLNNG-----ICMSYHDT 109 Query: 120 RRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + YP + +G + D + +Y H H NLK+ LL+Q I+A Sbjct: 110 RKFGRMYLYSKKEDIHAYPCFKNVGYDYMDQRVDGMYFYHCIHTLKRNLKSCLLDQSIMA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + L P + L + + K++ E +++L A GG+++R Sbjct: 170 GIGNIYADEICFALGLDPRSRACKLSKKD------CDKIVLETRRILQGATHYGGTTIRS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ +T C I++I + R T+ C CQK Sbjct: 224 YTSSLGVTGRFQLHLKVHDQTQ---CKVCHHAIKKITVSQRGTYLCPKCQK 271 >gi|295096574|emb|CBK85664.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease VIII [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 263 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T + L F + G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTHVWFAFPQL-----KPFESQLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + + + + L K ++Y+ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVEAD----EQPQTTRVLRVRLQ---TADKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPTFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+P K L L L + + + + G Sbjct: 165 AGLGNYLRVEILWEVGLAPQHKASQLSDEQ------LEALSHALLDIPRLSYNTRGV--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRAGKKC-ERCGGVIEKATISSRPFYWCPGCQ 262 >gi|218962135|ref|YP_001741910.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] gi|167730792|emb|CAO81704.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] Length = 267 Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 148/293 (50%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--NLRFDFPHH--FSAATRGKKIIDVSRR 56 MPELPEV+ I +L V+K T+ I + + P F + + + + RR Sbjct: 1 MPELPEVQSIINDLEKVLKGKTIKTIECYYSGTVITNCLPEDNPFPS-----RALAIKRR 55 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY++I LE + ++I+HL M+G I + ++ I L NN + + Sbjct: 56 GKYIIIMLERDNALIIHLRMTGKLIY----DTFCGEPLKYERARIILENNE-----VLHF 106 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + + P EP + F L + H K + +K AL++QKI Sbjct: 107 IDIRTFGKIVICSQKNIEHCLPPLG--LEPFSDDFTPKALKEKMHGKKAPIKIALMDQKI 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA ++P + + + N + K+IQ+ ++VL +AID GG+S+ Sbjct: 165 IAGLGNIYVCEILYRAGINPEKPANKITRKN------IVKIIQQTKEVLTEAIDKGGTSI 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY ID G FQN VY K + C G + R+ Q GRSTFYC CQK Sbjct: 219 SDYRRIDDKPGSFQNFLQVYQK--QFCPL--GHKVLRLKQGGRSTFYCPICQK 267 >gi|197120708|ref|YP_002132659.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] gi|196170557|gb|ACG71530.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] Length = 280 Score = 145 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 133/300 (44%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ + ++ HLGM+G +++ P+H + L + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLRGAEEP----APRHARAWLRLEGG-----GVL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIQPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + L I +DA Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAG------AKALAAGILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C I R+VQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPILRVVQAQRSTFFCPRCQR 280 >gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] Length = 328 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 32/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H +R P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + + +++VHLGMSG ++ CA H ++ L + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA------HVRISALLDDGT--- 126 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 127 --VLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR R Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNR 290 >gi|89896847|ref|YP_520334.1| hypothetical protein DSY4101 [Desulfitobacterium hafniense Y51] gi|89336295|dbj|BAE85890.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 272 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+E + L + + + R F + I V R KYL Sbjct: 1 MPEIPEMETYKNYLQRSVLGKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ H+ + G E + H + + +++ + + Sbjct: 61 ILALSSGKALCAHMMLDGRMYYEVAGEPVELPGRSH--IRLKFADHSILHFCDLRLGYLK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + LG +P D F+ K +K L++QK ++GI Sbjct: 119 LLEPSQVDAIKE--------GLGLDPLDAEFSLAAFLKILSGKRGMIKPLLMDQKNISGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A + P RKT +L +L I +L I GG + Sbjct: 171 GNAYANEILFAAGILPERKTPTLTDGEK------ERLYGVIPDLLQQGIAKGGYIEEPFA 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY +TG+PCL CG+ I++ + GR+ +YC CQ Sbjct: 225 PWDKLSGGMIPHFKVYDRTGQPCL-QCGEPIQQKIVGGRNAYYCLTCQ 271 >gi|302562223|ref|ZP_07314565.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302479841|gb|EFL42934.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 287 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 117/288 (40%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G+++I V R K+L Sbjct: 1 MPELPEVEALRDFLSEHLVGHEIVRVLPVAISVLKTYDPPLTA-LEGREVIAVHRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E +G + HL +G + + P + + + Sbjct: 60 GLETDGGPYFVTHLARAGWLQWKDRLPSGPPRPGRGPLALRVALETGAGFDL----TEAG 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + P + LGP+P F+ L + LK AL +Q ++AG+ Sbjct: 116 TQKRLAVYVVADPAEVPGVARLGPDPLAGDFDERRLADLLSGERRRLKGALRDQGLIAGV 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP + SL T +L + ++ L +A++ + Sbjct: 176 GNAYSDEILHAARMSPFKLAASLTPEETT------RLYEALRGTLTEAVERSRGVAAGRL 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 230 KAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 271 >gi|213855126|ref|ZP_03383366.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 250 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 129/254 (50%), Gaps = 19/254 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFS 254 DG GYF + Sbjct: 222 QSDGKPGYFARSCR 235 >gi|83319527|ref|YP_424603.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283413|gb|ABC01345.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 274 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINKTIIKSEIFSNKIVSSTSVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ II HL M+G ++IE++ K+ L NN + D Sbjct: 61 IVFELKE-YVIISHLRMTGKWVIENSDQYAYKKSWLK--AEFLLDNN-----LVARFYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLTNANLITKDQT------KEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +Q V+ + C C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQTKLFVH-LNNKNC-KLCNTKISKIKVNGRGTYYCSSCQK 274 >gi|320102895|ref|YP_004178486.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] gi|319750177|gb|ADV61937.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] Length = 288 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 116/297 (39%), Gaps = 29/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR---FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + R L + + + + L F + V RR Sbjct: 1 MPELPEVETMARGLRPTLTGAKLGQVEVIDPKLLEGSGMSADRFVERVSESVVSHVGRRG 60 Query: 58 KYLLIE--LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L+ + L +I G ++IE P H + L V Sbjct: 61 KWLVWTLAGQRGLVVIQPRMTGGFWLIEPD-------RPHHVRILFPL----PELGKTVW 109 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D RR G + + + Q P L + + LK L++QK Sbjct: 110 LTDARRLGRVLWF--ADQTQASAAFARSHGPDALEIERDDLAARLARTARGLKPTLMDQK 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AGIGNIY E + A++ P +L + +L I +L+ AI A GSS Sbjct: 168 VLAGIGNIYADEICFAARIHPEIPANTLSARQ------VDRLHAAISAILLRAIQAEGSS 221 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRSTFYCTYCQ 288 Y + G G F ++YG+ G+PC CG+ I + A GR T++C CQ Sbjct: 222 FDAGYRTVLGLEGGFLAENAMYGRGGQPC-PGCGEPILKTRIAGLIGRPTYFCPICQ 277 >gi|318060353|ref|ZP_07979076.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actG] Length = 287 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T + + L+ P +A G ++ DV R K+ Sbjct: 1 MPELPEVEALRDFLDDHLVGRIPTRVLPVAVNVLKTYDPP--PSALVGHEVTDVRRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + +G ++ HL +G + P K + + + L + + + Sbjct: 59 LDVVTDGGPRLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSGFD-----LTE 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + P + LGP+P F+ + LK AL +Q +VA Sbjct: 114 AGTQKRLAVYVVDDPRTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP + L + + +L + ++ L +A+ Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAG 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + A S YC CQ Sbjct: 228 SLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|108760481|ref|YP_634069.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108464361|gb|ABF89546.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] Length = 290 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 130/288 (45%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RRNL+ + + + A G+ + + RR KYL Sbjct: 1 MPELPEVEIARRNLVRWFSDRRIVRAESENTRIFRGAERQQFDALTGR-LESLVRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG ++ HLGM+G F+ + ++ L + + + ++DPR Sbjct: 60 LFAFEGGKGLMGHLGMTGKFVRRTEG-----QVAPYSRARFHLDDG-----HVIHFSDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG ++ + + +R LG +P + A L LK AL++Q+ ++G+ Sbjct: 110 MFGRLEPAPAARLRELDAVRILGRDPLADGLTAGQLQQAVGSSRKELKVALMDQERISGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EAL+RA L P R+ SL + +L+Q I+ + + Y+ Sbjct: 170 GNIHAAEALFRAGLHPSRQPGSLTPDEW------KRLVQAIRATIDFGLKEQEGEEPVYL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +N F VYG+ G PC S CG + Q GR+T +C CQ Sbjct: 224 ----EEGRSENPFQVYGRAGSPC-SQCGTRVESFTQGGRTTHFCPRCQ 266 >gi|226315118|ref|YP_002775014.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|226098068|dbj|BAH46510.1| putative formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 268 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + T+T + R+ P F+ + ++ V RR K+L Sbjct: 1 MPELPEMENYRRLLQEKIGGGTITATHVQREKTINLPPAEFARLLQDNRLTLVDRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LE +++HL + G + T + R++Y Sbjct: 61 LFHLESGHVLLLHLMLGGFLYLGSAEDKLKRTAQV-----------TLSFGERLLYFHGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + PEP D F T K S LK AL+NQ +AGI Sbjct: 110 RLGYLHLLTNVQIDERLAPLG--PEPLDPLFTFTRFTELLADKRSVLKTALVNQHWLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P R +L +L +Q VL +AI GG + Sbjct: 168 GNCYADEICFHAAILPTRTIPTLSLEEQ------KRLYHSMQTVLTEAIRFGGYMQPLF- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY + GEPC CGQ I + + R F C CQ Sbjct: 221 QGDSLTGGFDERCQVYDRGGEPC-PRCGQPIEKSELSSRKVFACANCQ 267 >gi|41326247|emb|CAF20409.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE [Corynebacterium glutamicum ATCC 13032] Length = 277 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 83/292 (28%), Positives = 129/292 (44%), Gaps = 29/292 (9%) Query: 10 IRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRAKYLLIE--- 63 +RR L M T+ + + A G ++ RR K+L +E Sbjct: 1 MRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRGKFLWLELID 60 Query: 64 -----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L ++VHLGMSG +I+ H + L N V + D Sbjct: 61 APSGETRPDLGLLVHLGMSGQMLIKEPDAPISP----HLRAKVELDNGD-----EVWFVD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG+ L + + + + D S + + + S +K LLNQ+IV+ Sbjct: 112 QRTFGYWWLGDLVD-GVPERVSHIATDVLDESADFSAIARNLKSRKSEIKRLLLNQEIVS 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A+ GG+S Sbjct: 171 GIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKALAQGGTSFDA 224 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + + Y +TGEPC CG +I R R + YC CQK Sbjct: 225 LYVNVNGNSGYFALSLNAYAQTGEPCG-RCGTLIIRESFMNRGSHYCPNCQK 275 >gi|117165133|emb|CAJ88687.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces ambofaciens ATCC 23877] Length = 287 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + + + + + L+ P +A G ++ V R K+ Sbjct: 1 MPELPEVEALREFLTEHLVDREIVRVLPVAISVLKTYDPP--LSALEGHQVAAVHRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +E G ++ HL +G + + P + + + + Sbjct: 59 LDVETAGGPHLVTHLARAGWLHWKDSLPDGPPRPGKGPLALRVALDTGAGFDL----TEA 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + + P + LGP+P + F+ + LK AL +Q ++AG Sbjct: 115 GTQKRLAVYVVADPREVPGVARLGPDPLADDFDEARFAALLDGERRQLKGALRDQSLIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AK+SP + SL +L + ++ L +A++ Sbjct: 175 VGNAYSDEILHAAKMSPFKLAASLTDEET------ARLYEALRATLTEAVERSRGVAAGR 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 229 LKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 271 >gi|29833831|ref|NP_828465.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|29610955|dbj|BAC75000.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 114/289 (39%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L + V + + L+ P A G++I V R K+ Sbjct: 1 MPELPEVEALKDFLADHVVGHEVVRVLPVAISVLKTYDPP--VTALEGREITAVRRHGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +E +G V G ++ P + + + T Sbjct: 59 LDLEADGLHF--VTHLARGGWLHWRDKLPDAPPRPGKGPLALRVALETGEGFDLTEAGTQ 116 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +R + + P + LGP+P + F+ + +K AL +Q ++AG Sbjct: 117 KRLAVHVVRDPGDV---PGVARLGPDPLADDFDEARFARLLEGERRRIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AK+SP + T +L + +L ++ L +A++ Sbjct: 174 VGNAYSDEILHAAKMSPFKLTSALTAEE------IRQLYAALRTTLTEAVERSRGLAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 228 LKAEKKTG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 270 >gi|283457875|ref|YP_003362475.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133890|dbj|BAI64655.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 359 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 92/357 (25%), Positives = 153/357 (42%), Gaps = 75/357 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + V + + ++LR P HF A G+ + RR Sbjct: 5 MPELPEVETVRAGIADHSLGRPVRAVRVVDARSLRRHLPGPAHFETALTGRALRGAYRRG 64 Query: 58 KYLLIELEG------NLSIIVHLGMSGSFIIEHTSC------------------AKPIKN 93 KYL + L + +++VHLGMSG ++ A + Sbjct: 65 KYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGGDSGSESGSDSGNESEARAAFDEQ 124 Query: 94 PQHNHVTISL----------------TNNTNTKKYRVIYNDPRRFGFMDLVE-------- 129 P+H V + L + N R+++ D R FG M L Sbjct: 125 PRHLRVALELGPVGATSVAGATGGAASANRANTGQRLLFVDQRIFGGMFLSPLVPDVPAA 184 Query: 130 -----------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +P D F+ + +F + +S +K LL+Q +++ Sbjct: 185 VATNKVAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLDQSVIS 244 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALWRA+L + R+L +L++ + +VL +++ AGG+S Sbjct: 245 GVGNIYADEALWRARLHYAKPARTLSAAQT------RELLEAVTQVLRESLAAGGTSFDA 298 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV++ G GYF+ + + YG+ GEPC C ++ R RS++ C +CQ+ Sbjct: 299 LYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQNRSSYRCPHCQR 354 >gi|115372595|ref|ZP_01459902.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|310823827|ref|YP_003956185.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|115370316|gb|EAU69244.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|309396899|gb|ADO74358.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] Length = 281 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RRNL+ + V + +A +G+ + + RR KYL Sbjct: 1 MPELPEVEIARRNLVRWIGPRRVVKAEADDTRVFRGAERARFSALKGR-VESLERRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGM+G F+ + ++ L + T + + DPR Sbjct: 60 LWTFEAGRGLLAHLGMTGKFVRRQKGQPE-----PYSRARFHLEDGT-----VIHFRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG M+ V S +++LG +P ++ L +LK AL++Q +AG+ Sbjct: 110 LFGRMEPVPASELRALEAIQSLGRDPLEDGLTGPQLAEAVGTSRQDLKVALMDQGRLAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EAL+RA L P RK +L + +L + I + ++ Y+ Sbjct: 170 GNIHAAEALFRAGLHPARKPDTLTPEDW------KRLARAIHATIAFGLEEQEGEEPVYL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +N F VYG+ G+PC C + QAGR+T C CQ Sbjct: 224 ----EDGGAENVFRVYGRAGQPCQ-VCQSPVESFTQAGRTTHVCPECQ 266 >gi|329938480|ref|ZP_08287905.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329302453|gb|EGG46344.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 286 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC---LHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + VT + +H P +A +G+ + V R Sbjct: 1 MPELPEVEALRDFLTGHLVGREVTRVLPLAVHVLKTYDPPP----SALQGRTVTAVHRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L ++ L ++ HL +G P + + + Sbjct: 57 KFLDLDA-EGLHLVTHLARAGWLHWRDRLPETPPRPGKGPLALRVALDTGAGFDL----T 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + + + + P + LGP+P F+ L + LK AL +Q ++ Sbjct: 112 EAGTQKRLAVYVVRDAAEVPGVARLGPDPLAADFDEARLAGLLAGERRQLKGALRDQGLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L A++SP + T SL +++L + ++ L +A++ Sbjct: 172 AGVGNAYSDEILHAARMSPFKPTASLTPEE------IHRLYEALRGTLTEAVERSRGVAA 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 226 GRLKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 270 >gi|333023009|ref|ZP_08451073.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332742861|gb|EGJ73302.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 287 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 117/290 (40%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T T + + L+ P +A G ++ DV R K+ Sbjct: 1 MPELPEVEALRDFLDDHLVGRTPTRVLPVAVNVLKTYDPP--PSALVGHEVTDVRRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + +G ++ HL +G + P K + + + L + + + Sbjct: 59 LDVVTDGGPHLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSGFD-----LTE 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + P + LGP+P F+ + LK AL +Q +VA Sbjct: 114 AGTQKRLAVYVVDDPRTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP + L + + +L + ++ L +A+ Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAG 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG IR + A S YC CQ Sbjct: 228 SLKAEKKSG-----LRVHGRTGESC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|149922617|ref|ZP_01911045.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816503|gb|EDM76000.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 286 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 143/296 (48%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR L V + NLR + H RG V RR Sbjct: 1 MPELPEVESVRRGLARARLKTPVVKLWRSSFNLRTGKNWLRKHEGLEQLRGATPGPVRRR 60 Query: 57 AKYLLIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KY+L ++G L +++HLGMSG + H H + ++ Sbjct: 61 GKYILWHMQGADEGELVLLIHLGMSGRCGVARADQPIV----DHTHFIATFADDR----- 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 ++ + DPRRFG + + Y+ P+ LGPEP F+ L K L++ALL Sbjct: 112 QLRFVDPRRFGGLKVGTRETIYEREPVAALGPEPLSEDFDGAVLEAALGKSKRALRDALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAGIGNIY EA + A+L+P+R SL + + + KL + VL + G Sbjct: 172 DQRAVAGIGNIYAVEACFEARLNPLRPAASLSRRSWS------KLADALVLVLERGVRNG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++L+D+ ++ G +G Q+ VYG+ GEPC CG+ + V RS CT CQ Sbjct: 226 GTTLKDFRNVVGEVGRNQDDLRVYGRGGEPC-PRCGRRLADFVSQNRSGVMCTRCQ 280 >gi|329767933|ref|ZP_08259445.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] gi|328838596|gb|EGF88199.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] Length = 286 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 94/302 (31%), Positives = 135/302 (44%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV----------TDICLHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L V+ N + L++ + ++FS +GK I Sbjct: 1 MPELPEVENIKFGLEEVVINKQILDMKYSNVVTESHKLNKMAIVKQDINYFSENVKGKTI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNT 109 +SRR KYL L II H GM+G+F + KN H HV L+ Sbjct: 61 EKLSRRGKYLYFTLNE-GYIITHFGMTGAFFLVKDISEITNKNYFKHQHVIFELSTGE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++IY+D RRFG + +E K++ P + + K+ ++K Sbjct: 118 ---KLIYSDIRRFGELRYIEDVTKFKPFVNLAPEPFDKKAKKYFLDKLDENKYKDQSIKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL + G GNIY CE L+R K+ P+ K L + L +E+ +L AI Sbjct: 175 LLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKK------ESLFKELVDILELAI 228 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--GQMIRRIVQAGRSTFYCTYC 287 GGS++ DYVH DG G QN +YGK C G + + GRS+ +C C Sbjct: 229 KEGGSTISDYVHTDGGEGNMQNFHQIYGK------KVCPLGHDVENVTIKGRSSHFCPIC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|256384331|gb|ACU78901.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385164|gb|ACU79733.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455864|gb|ADH22099.1| DNA-formamidopyrimidine glycosylase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 274 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ + II HL M+G ++IE++ K + + L + N + D Sbjct: 61 IVIELKEH-VIISHLRMTGKWVIENSDQYAYKK----SWLRAELLLDNN---LVFRFYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLTSANLITRDQTN------EIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|161504121|ref|YP_001571233.1| endonuclease VIII [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189037133|sp|A9MJM8|END8_SALAR RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|160865468|gb|ABX22091.1| hypothetical protein SARI_02219 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 263 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADHLEAAIKGKLLTDVWFAFAQL-----KPYESQLTGQMVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPHTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+++L+ K + L + L L + + + G + Sbjct: 165 AGLGNYLRVEILWQSELTGQHKAKDLSEAQ------LNTLSHALLDIPRLSYATRGQTDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H Q F V+ + GE C CG +I + + R ++C +CQK Sbjct: 219 NKHHGA------QFRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|297155165|gb|ADI04877.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 288 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + L + + ++ + + G+ + V R K+L Sbjct: 1 MPELPEVEALAQILAERAVGREIARVHPAAVSVLKTYDPPLTD-LEGRTVTAVRRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +++HL +G P + + + + R Sbjct: 60 DL-ATDGPHLVLHLARAGWLRWRDGLPEDPPRPGKGPLALRLRLAGPEGAGFDLTEAGTR 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + V + P + LGP+P SF +K L +Q ++AGI Sbjct: 119 KALSVYCV--HDPQEVPGIARLGPDPLAESFTLEEFAGLLRGVRHRIKGVLRDQSVIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP R L + + +L + + L DA++ + Sbjct: 177 GNAYSDEILHAARMSPYRLAGDLTEEE------VARLYEAMGATLRDAVERSLGPAARDL 230 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TG+PC CG M+R + A S YC CQ Sbjct: 231 KAEKRSG-----MRVHGRTGQPC-PVCGDMVREVSFADSSLQYCPTCQ 272 >gi|331703660|ref|YP_004400347.1| formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802215|emb|CBW54369.1| Formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 274 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ + II HL M+G ++IE++ K + + L + N + D Sbjct: 61 IVIELKEH-VIISHLRMTGKWVIENSDQYAYKK----SWLRAELLLDNN---LVFRFYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ +I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLTSANLITKDQTNQ------IIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|219667324|ref|YP_002457759.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] gi|219537584|gb|ACL19323.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] Length = 272 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+E + L + + + + + R F + I V R KYL Sbjct: 1 MPEIPEMETYKNYLQLSVLDKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ H+ + G E + H + + +++ + + Sbjct: 61 ILALSSGKALCAHMMLDGRMYYEVAGEPVELPGRSH--IRLKFADHSILHFCDLRLGYLK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + LG +P D F+ + K +K L++QK ++GI Sbjct: 119 LLAPSQVDAIKE--------GLGLDPLDAEFSLAAFLNILSGKRGMIKPLLMDQKNISGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A + P RKT +L +L I +L AI GG + Sbjct: 171 GNAYSNEILFAAGILPERKTPTLTDGERD------RLYGVIPDLLQQAIAKGGYIEEPFA 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY +TG+PCL CG+ I++ GR+ +YC CQ Sbjct: 225 SWDKLSGGMIPYFKVYDRTGQPCL-QCGEPIKQKTVGGRNAYYCLTCQ 271 >gi|261341306|ref|ZP_05969164.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] gi|288316610|gb|EFC55548.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] Length = 263 Score = 142 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +T + L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTRVWFAFPQL-----KKYESMLVGQTVTHIDTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + + + + + L K ++Y+ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVNAD----EQPETTRVLRVRLQ---TADKAVLLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L+ +GP+ D A + + +N L+Q + Sbjct: 109 ----IDMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPKFRNRQFSGLFLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ K L L L + ++ + + G Sbjct: 165 AGLGNYLRVEILWDVGLAAQHKASQLSDAQ------LDALSHALLEIPRLSYNTRGMV-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G++ F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 217 DDKKHHGAL----FRFRVFHRAGKKC-ERCGGIIEKTTLSSRPFYWCPGCQR 263 >gi|289667980|ref|ZP_06489055.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 227 Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 88/243 (36%), Positives = 134/243 (55%), Gaps = 18/243 (7%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G I +V RRAKYLLI+ + S ++HLGMSGS + H+HV ISL N Sbjct: 3 GAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDT----LPRSHDHVDISLQNG 58 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + +NDPRRFG L+ S + L LGPEP ++F YL + + + Sbjct: 59 R-----VLRFNDPRRFG--CLLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAA 111 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K L++Q +V G+GNIY E+L RA +SP+R+ + + +L ++ +L Sbjct: 112 VKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLDR------YRRLADAVKDILA 165 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI GG++LRD++ DG+ GYF+ +VYG+ GEPC CG++++ R+T +C Sbjct: 166 YAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWCGS 224 Query: 287 CQK 289 CQ+ Sbjct: 225 CQR 227 >gi|296103352|ref|YP_003613498.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057811|gb|ADF62549.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 263 Score = 142 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +TD+ L F A G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTDVWFAFPQL-----KPFEAPLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + +T+ + + + L K ++Y+ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVNTN----EQPQTTRVLRVRLQ---TADKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLLTHPFLQRVGPDVLDMRLTANDVKARLLSPKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ K L + L L + + + + G Sbjct: 165 AGLGNYLRVEILWEVGLAAQHKASQLSDDQ------LEVLSHALLDIPRLSYNTRGV--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 216 --VDDNKHHGAL-FRFKVFHRAGKRC-ERCGGVIEKTTLSSRPFYWCPGCQR 263 >gi|206603467|gb|EDZ39947.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum sp. Group II '5-way CG'] Length = 291 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E IR ++ + V I + + + + V R K L Sbjct: 1 MPELPEAEAIRLPVIRFFSDGIVESIKRGNNKKIWIGENEY--RLEELFLFTVRRTGKVL 58 Query: 61 LIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + + +I LGMSG+++I+H P H H+ IS + +R++ Sbjct: 59 IFDWRITKEKPAVLLISRLGMSGTWLIQHLRDPL----PDHCHLVISFKD----SAHRLV 110 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG ++ + + P A + + + +++ LL+QK Sbjct: 111 YRDPRRFGRLEW----AFEEECSVILASQGPDILKIPADDWYREARRSSRTIRSLLLDQK 166 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I +GIGNIY E L+ A LSP R +SL + Y+++ +++L AI +GGS+ Sbjct: 167 ISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAARQILESAIRSGGST 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G G +Q+ +VYG+ G+PCL C I+ + +A R+ FYC CQK Sbjct: 221 IHSFQTSLGENGRYQDRHTVYGRAGKPCL-QCSTPIQSVREASRTLFYCPVCQK 273 >gi|74311239|ref|YP_309658.1| endonuclease VIII [Shigella sonnei Ss046] gi|123617735|sp|Q3Z489|END8_SHISS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|73854716|gb|AAZ87423.1| endonuclease VIII/DNA N-glycosylase with an AP lyase activity [Shigella sonnei Ss046] Length = 263 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSY-----ATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GLVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|215485737|ref|YP_002328168.1| endonuclease VIII [Escherichia coli O127:H6 str. E2348/69] gi|312965146|ref|ZP_07779383.1| endonuclease VIII [Escherichia coli 2362-75] gi|254783120|sp|B7ULJ5|END8_ECO27 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|215263809|emb|CAS08145.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|312290237|gb|EFR18120.1| endonuclease VIII [Escherichia coli 2362-75] Length = 263 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +G + D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGHDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|42561208|ref|NP_975659.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492706|emb|CAE77301.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320956|gb|ADK69599.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 274 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTNVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ + II HL M+G ++IE++ K + + L + N + D Sbjct: 61 IVIELKEH-VIISHLRMTGKWVIENSDQYAYKK----SWLRAELLLDNN---LVFRFYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N +A YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSADYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLVSANLITKDQT------KEIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|124516591|gb|EAY58099.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum rubarum] Length = 291 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E IR ++ + V I + + + +V R K L Sbjct: 1 MPELPEAEAIRLPVLRFFSDGVVESIRRGSNKNIWIGEEEY--RLGELFLFNVRRTGKVL 58 Query: 61 LIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + + +I LGMSG+++I+H P H H+ IS N +R++ Sbjct: 59 IFDWRTTKEKTAVLLISRLGMSGTWLIQHLREPL----PDHCHLVISFKN----LAHRLV 110 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG ++ + + P A Q K + +++ LL+QK Sbjct: 111 YRDPRRFGRLEW----TFEEESSVILASQGPDILKIPADEWHRQARKSSRTIRSLLLDQK 166 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I +GIGNIY E L+ A LSP R +SL + Y+++ +++L AI +GGS+ Sbjct: 167 ISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAAREILEAAIRSGGST 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G G +Q+ VYG+ G+PC +C I+ + +A R+ FYC +CQK Sbjct: 221 IHSFQTSLGEDGRYQDRHIVYGRAGKPC-PHCSTPIQSVKEASRTLFYCPFCQK 273 >gi|218704031|ref|YP_002411550.1| endonuclease VIII [Escherichia coli UMN026] gi|293403958|ref|ZP_06647952.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298379734|ref|ZP_06989339.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300900708|ref|ZP_07118857.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] gi|226741114|sp|B7N9V3|END8_ECOLU RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218431128|emb|CAR12004.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|291428544|gb|EFF01569.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298279432|gb|EFI20940.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300355767|gb|EFJ71637.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] Length = 263 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLSAAQ------LDALAHALLDIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|323163870|gb|EFZ49680.1| endonuclease VIII [Shigella sonnei 53G] Length = 263 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|16128689|ref|NP_415242.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89107572|ref|AP_001352.1| endonuclease VIII [Escherichia coli str. K-12 substr. W3110] gi|170080381|ref|YP_001729701.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238899979|ref|YP_002925775.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|300947207|ref|ZP_07161417.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|300957658|ref|ZP_07169849.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|301027113|ref|ZP_07190483.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|301647439|ref|ZP_07247246.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|307137325|ref|ZP_07496681.1| endonuclease VIII [Escherichia coli H736] gi|331641215|ref|ZP_08342350.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] gi|1706651|sp|P50465|END8_ECOLI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741113|sp|B1X6P5|END8_ECODH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|259645858|sp|C4ZWI9|END8_ECOBW RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|1054938|gb|AAC45355.1| endonuclease VIII [Escherichia coli] gi|1786932|gb|AAC73808.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|2190281|dbj|BAA20414.1| endonuclease VIII [Escherichia coli] gi|4062310|dbj|BAA35378.1| endonuclease VIII [Escherichia coli str. K12 substr. W3110] gi|169888216|gb|ACB01923.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238861032|gb|ACR63030.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|260450133|gb|ACX40555.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli DH1] gi|299879402|gb|EFI87613.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|300315619|gb|EFJ65403.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|300453193|gb|EFK16813.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|301074413|gb|EFK89219.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|315135370|dbj|BAJ42529.1| endonuclease VIII [Escherichia coli DH1] gi|315614659|gb|EFU95300.1| endonuclease VIII [Escherichia coli 3431] gi|323942975|gb|EGB39138.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E482] gi|323971999|gb|EGB67219.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TA007] gi|331038013|gb|EGI10233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|302542232|ref|ZP_07294574.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302459850|gb|EFL22943.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 286 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 16/280 (5%) Query: 15 MMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRAKYLL-IELEGNLSI 70 + TV ++ + +R F+A G++ V RR KYL + ++ Sbjct: 2 ERWISGRTVAEVQVLHPRAVRRHLGGAEDFAARLTGRRTGAVRRRGKYLWLPFEDTAEAV 61 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET 130 + HLGMSG +++ + +H + + ++ T+ V V Sbjct: 62 LAHLGMSGQLLVQPG----HAPDEKHLRIRVRFADDVGTELRFVDQRTFGGLSLHGSVPG 117 Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 L+ + + +P D +F+ ++ + +K ALL+Q +++G+GNIY EALW Sbjct: 118 DLEGLPDAIAHIARDPLDPAFDEAAFHLALRRRRTTVKRALLDQSLISGVGNIYADEALW 177 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYF 249 RA+L R T +L + +L+ ++ V+ A+ GG+S YV+++G GYF Sbjct: 178 RARLHYDRPTATLTRPRS------AELLGHVRDVMSAALAVGGTSFDSLYVNVNGESGYF 231 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 232 ERSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 270 >gi|157160194|ref|YP_001457512.1| endonuclease VIII [Escherichia coli HS] gi|170020941|ref|YP_001725895.1| endonuclease VIII [Escherichia coli ATCC 8739] gi|188492106|ref|ZP_02999376.1| endonuclease VIII [Escherichia coli 53638] gi|194439240|ref|ZP_03071320.1| endonuclease VIII [Escherichia coli 101-1] gi|253774316|ref|YP_003037147.1| endonuclease VIII [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160784|ref|YP_003043892.1| endonuclease VIII [Escherichia coli B str. REL606] gi|300929484|ref|ZP_07144952.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|166920090|sp|A7ZXX5|END8_ECOHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|189037132|sp|B1IY15|END8_ECOLC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157065874|gb|ABV05129.1| endonuclease VIII [Escherichia coli HS] gi|169755869|gb|ACA78568.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli ATCC 8739] gi|188487305|gb|EDU62408.1| endonuclease VIII [Escherichia coli 53638] gi|194421825|gb|EDX37832.1| endonuclease VIII [Escherichia coli 101-1] gi|242376476|emb|CAQ31180.1| endonuclease VIII [Escherichia coli BL21(DE3)] gi|253325360|gb|ACT29962.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972685|gb|ACT38356.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli B str. REL606] gi|253976879|gb|ACT42549.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BL21(DE3)] gi|300462593|gb|EFK26086.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|309700936|emb|CBJ00233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli ETEC H10407] gi|323938292|gb|EGB34549.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1520] gi|323963094|gb|EGB58664.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H489] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|191167209|ref|ZP_03029028.1| endonuclease VIII [Escherichia coli B7A] gi|193070644|ref|ZP_03051581.1| endonuclease VIII [Escherichia coli E110019] gi|256021212|ref|ZP_05435077.1| endonuclease VIII [Shigella sp. D9] gi|260853949|ref|YP_003227840.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260866845|ref|YP_003233247.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|309797426|ref|ZP_07691818.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|332282439|ref|ZP_08394852.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] gi|190902757|gb|EDV62487.1| endonuclease VIII [Escherichia coli B7A] gi|192956032|gb|EDV86498.1| endonuclease VIII [Escherichia coli E110019] gi|257752598|dbj|BAI24100.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257763201|dbj|BAI34696.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|308118950|gb|EFO56212.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|323153773|gb|EFZ40020.1| endonuclease VIII [Escherichia coli EPECa14] gi|323180049|gb|EFZ65605.1| endonuclease VIII [Escherichia coli 1180] gi|332104791|gb|EGJ08137.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERVLSPRFRNRQFAGLLLEQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|91209750|ref|YP_539736.1| endonuclease VIII [Escherichia coli UTI89] gi|117622911|ref|YP_851824.1| endonuclease VIII [Escherichia coli APEC O1] gi|218557634|ref|YP_002390547.1| endonuclease VIII [Escherichia coli S88] gi|218688511|ref|YP_002396723.1| endonuclease VIII [Escherichia coli ED1a] gi|237707322|ref|ZP_04537803.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|306812874|ref|ZP_07447067.1| endonuclease VIII [Escherichia coli NC101] gi|122424567|sp|Q1REK9|END8_ECOUT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|166920091|sp|A1A8X0|END8_ECOK1 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741110|sp|B7MFX3|END8_ECO45 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783122|sp|B7MPL0|END8_ECO81 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|91071324|gb|ABE06205.1| endonuclease VIII [Escherichia coli UTI89] gi|115512035|gb|ABJ00110.1| endonuclease VIII [Escherichia coli APEC O1] gi|218364403|emb|CAR02082.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218426075|emb|CAR06892.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|226898532|gb|EEH84791.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|294491202|gb|ADE89958.1| endonuclease VIII [Escherichia coli IHE3034] gi|305853637|gb|EFM54076.1| endonuclease VIII [Escherichia coli NC101] gi|307627868|gb|ADN72172.1| endonuclease VIII [Escherichia coli UM146] gi|315287170|gb|EFU46582.1| zinc finger found in FPG and IleRS [Escherichia coli MS 110-3] gi|320194126|gb|EFW68758.1| Endonuclease VIII [Escherichia coli WV_060327] gi|323952724|gb|EGB48592.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H252] gi|323958461|gb|EGB54167.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H263] gi|324006240|gb|EGB75459.1| zinc finger found in FPG and IleRS [Escherichia coli MS 57-2] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDTPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|26246683|ref|NP_752723.1| endonuclease VIII [Escherichia coli CFT073] gi|110640924|ref|YP_668652.1| endonuclease VIII [Escherichia coli 536] gi|191174054|ref|ZP_03035570.1| endonuclease VIII [Escherichia coli F11] gi|227884317|ref|ZP_04002122.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300989874|ref|ZP_07179003.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|300996474|ref|ZP_07181448.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|301046040|ref|ZP_07193220.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|331656734|ref|ZP_08357696.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] gi|57012700|sp|Q8FJU5|END8_ECOL6 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|122958487|sp|Q0TJX8|END8_ECOL5 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|26107082|gb|AAN79266.1|AE016757_170 Endonuclease VIII [Escherichia coli CFT073] gi|110342516|gb|ABG68753.1| endonuclease VIII [Escherichia coli 536] gi|190905662|gb|EDV65285.1| endonuclease VIII [Escherichia coli F11] gi|222032454|emb|CAP75193.1| endonuclease VIII [Escherichia coli LF82] gi|227838403|gb|EEJ48869.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300301957|gb|EFJ58342.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|300304528|gb|EFJ59048.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|300407277|gb|EFJ90815.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|307552567|gb|ADN45342.1| endonuclease VIII [Escherichia coli ABU 83972] gi|312945242|gb|ADR26069.1| endonuclease VIII [Escherichia coli O83:H1 str. NRG 857C] gi|315292029|gb|EFU51381.1| zinc finger found in FPG and IleRS [Escherichia coli MS 153-1] gi|315299245|gb|EFU58499.1| zinc finger found in FPG and IleRS [Escherichia coli MS 16-3] gi|324010437|gb|EGB79656.1| zinc finger found in FPG and IleRS [Escherichia coli MS 60-1] gi|331054982|gb|EGI26991.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] Length = 263 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|220915420|ref|YP_002490724.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953274|gb|ACL63658.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 280 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ + ++ HLGM+G +++ P+H + L + Sbjct: 61 KHLLVALERGGAPVGLLAHLGMTGKWVLRGAEEP----APRHARAWLRLDGG-----GVL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ + L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIDPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + I +DA Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAEAKALAA------AILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C I R+VQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRKGGRTSPIARVVQAQRSTFFCPRCQR 280 >gi|255326577|ref|ZP_05367654.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296317|gb|EET75657.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 360 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 91/362 (25%), Positives = 153/362 (42%), Gaps = 80/362 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + V + + ++LR P HF A G+ + RR Sbjct: 1 MPELPEVETVRAGIADHSLGRLVQAVRVVDARSLRRHLPGPAHFEVALTGRALRGAYRRG 60 Query: 58 KYLLIELEG------NLSIIVHLGMSGSFIIEHTSCAK------------------PIKN 93 KYL + L + +++VHLGMSG ++ + + Sbjct: 61 KYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGDEPGGDSGSDSGSESEARAAFDEQ 120 Query: 94 PQHNHVTISL----------------TNNTNTKKYRVIYNDPRRFGFMDLVE-------- 129 P+H V + L + N R+++ D R FG M L Sbjct: 121 PRHLRVALELGPVGATSAAGATGGTVSTNRAGTGQRLLFVDQRIFGGMFLSRLVPDVPAA 180 Query: 130 ----------------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 ++ + +P D F+ + +F + +S +K LL+ Sbjct: 181 VAVNEAAAGEAAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLD 240 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L + R+L +L++ + +VL +++ AGG Sbjct: 241 QSVISGVGNIYADEALWRARLHYAKPARTLSAAQT------RELLEAVTQVLRESLAAGG 294 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYC 287 +S YV++ G GYF+ + + YG+ GEPC C ++ R RS++ C +C Sbjct: 295 TSFDALYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQNRSSYRCPHC 353 Query: 288 QK 289 Q+ Sbjct: 354 QR 355 >gi|322833850|ref|YP_004213877.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] gi|321169051|gb|ADW74750.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] Length = 264 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 31/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + N +TD+ L + +A RG +I + R K L Sbjct: 1 MPEGPEIRRAADVLATAVVNKPLTDVWFAFPAL-----KPYQSALRGTRITSIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + ++ + + L T+ ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVNAGE---VEKETKRSLRVKLE---TTEAAILLYSASE 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + + +T+ ++P L+ +GP+ D + + N L LL+Q + Sbjct: 110 ----ISIYDTAEIEKHPFLQRIGPDVLDERLTVAQVRERLLSPKFCNRQLGGMLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW AKL P K + L L V + G+ Sbjct: 166 AGLGNYLRAEILWLAKLLPDHKPKELNDTERD------ALADACLSVARLSYATRGTMDE 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+G+TG+PC CG I + + R F+C CQ Sbjct: 220 NVHHGAL------FRFKVFGRTGQPC-ERCGDPIMKTSVSSRPFFWCPVCQ 263 >gi|302555694|ref|ZP_07308036.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302473312|gb|EFL36405.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 287 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 114/288 (39%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L + + + ++ F SA G ++ V R K+L Sbjct: 1 MPELPEVEALKDFLTEHLVGHQIVRVLPVAISVLKTFDPPLSA-VEGHEVAAVRRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++ HL +G P + + T + + + Sbjct: 60 DIATADGPHLVTHLARAGWLQW-KDRLPDGPPRPGKGPLALRAALETGA-GFDLTEAGTQ 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +VE + P + LGP+P + F+ L + LK AL +Q ++AG+ Sbjct: 118 KRLAVYVVEDPQE--VPGVARLGPDPLADDFDERRLAELLAGERRQLKGALRDQSLIAGV 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP + SL +L ++ L DA++ + Sbjct: 176 GNAYSDEILHAAKMSPFKLAASLSAAETG------RLYAALRDTLTDAVERSRGVAAGRL 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+ GEPC CG IR + + S YC CQ Sbjct: 230 KAEKKSG-----LRVHGRAGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|331645866|ref|ZP_08346969.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] gi|330910465|gb|EGH38975.1| endonuclease V3 [Escherichia coli AA86] gi|331044618|gb|EGI16745.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWHVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAPQ------LDALAHALLDIPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|256023684|ref|ZP_05437549.1| endonuclease VIII [Escherichia sp. 4_1_40B] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|284920492|emb|CBG33554.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli 042] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----EPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLSAAQ------LDALAHALLDIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|281177852|dbj|BAI54182.1| endonuclease VIII [Escherichia coli SE15] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAPQ------LDALAHALLDIPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|170683193|ref|YP_001742818.1| endonuclease VIII [Escherichia coli SMS-3-5] gi|226741116|sp|B1LLF1|END8_ECOSM RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|170520911|gb|ACB19089.1| endonuclease VIII [Escherichia coli SMS-3-5] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 104/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|56414155|ref|YP_151230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363077|ref|YP_002142714.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821335|sp|Q5PCL7|END8_SALPA RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741124|sp|B5BC82|END8_SALPK RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|56128412|gb|AAV77918.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094554|emb|CAR60074.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 263 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ I + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQIITRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|238020718|ref|ZP_04601144.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] gi|237867698|gb|EEP68704.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] Length = 198 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 16/214 (7%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGS + + K H+HV I+ N T + Y+DPRRFG + + ++ Sbjct: 1 MSGSLRVWQGNAPAAGK---HDHVDIAFANGT-----LLRYHDPRRFGAILWLAGVAEH- 51 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L+ LG EP + F A YL K+ +K AL+N KIV G+GNIY E+L++A ++ Sbjct: 52 HDLLKDLGVEPLSDDFTADYLFQALQKRGCPVKTALMNNKIVVGVGNIYANESLFQAAIA 111 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R +S K L ++++L AI+ GGS+LRD+V+ +G GYFQ + V Sbjct: 112 PQRAAKS------LRKTECAALTAAVKQILRRAIETGGSTLRDFVNSEGKSGYFQQEYKV 165 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YGKT +PC CG I + V R TFYC CQ+ Sbjct: 166 YGKTDQPCAH-CGTPIVKTVIGQRGTFYCPTCQR 198 >gi|323976316|gb|EGB71406.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TW10509] Length = 263 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|254515713|ref|ZP_05127773.1| endonuclease VIII [gamma proteobacterium NOR5-3] gi|219675435|gb|EED31801.1| endonuclease VIII [gamma proteobacterium NOR5-3] Length = 274 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 102/291 (35%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + T+ ++ F F G++++D+ R K L Sbjct: 1 MPEGPEIRRAADRIADVLVDRTIEEVVFA-----FPELQRFGGLLTGQQVLDIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +I H + G + I + ++ L +T T + Sbjct: 56 LTHFDNDYAIYSHNQLYGVWKIAKRGK------MPATNRSLRLALHTATHSALLYSASDI 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + +L L+Q +AG Sbjct: 110 SVWAREELGMHPFLATLGPD--LLSANLSWQDISERLQMPRFAGRSLSALYLDQHFMAGS 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L+ A L P R+ R L + L +E K+ + + GG +L + Sbjct: 168 GNYLRSEILFCAGLHPRRRPRDLTRAQRG------ALARETLKLPRRSYETGGITLPVRL 221 Query: 241 HIDGSI---GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ + F V+G+ G PC CG I R R ++C CQ Sbjct: 222 AASLKKTVKGFERRRFFVFGRDGRPCY-QCGDTILRDSMGSRRIYWCPTCQ 271 >gi|282163419|ref|YP_003355804.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] gi|282155733|dbj|BAI60821.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] Length = 269 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + +K T+ +I + ++ + FS GKKI V+ + K++ Sbjct: 1 MPELPEIYNLAGQMDEALKGKTIREIQIRQEKCLNMPANEFSTLVVGKKIRQVTPKGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++LE + ++ LGM G+ + P+ V ++ +N+ + Sbjct: 61 FMKLEPDGYFLLSLGMGGNLLYHRPGDN----IPEKYQVALTFDDNSRLSIGFWWFGYAH 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++ LG P D +F K ++K ALL+Q +AGI Sbjct: 117 A--------VKDLKEHKMTHKLGVSPVDPAFTLEKFYGMLEGKKGSVKTALLDQSFIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y + L+ AKL P RK +L + L + I+ L +AI GG + Sbjct: 169 GNVYAQDILFNAKLHPDRKIPTLTEGER------RALFEAIRHDLDEAIALGGIAPE--K 220 Query: 241 HIDGSIGYFQ-NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G + F + G+PC CG I +I +++ C CQ+ Sbjct: 221 DLYGKPGRLTIDDFKAGYREGKPC-PVCGTTIEKIKTGSTASYICPKCQR 269 >gi|323967463|gb|EGB62882.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli M863] gi|327254388|gb|EGE66010.1| endonuclease VIII [Escherichia coli STEC_7v] Length = 263 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEAAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|168238871|ref|ZP_02663929.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734233|ref|YP_002113835.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226741125|sp|B4TQ44|END8_SALSV RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194709735|gb|ACF88956.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288348|gb|EDY27729.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 263 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTADQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|328886861|emb|CCA60100.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 290 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + + + + L+ P +A G ++ ++R K+ Sbjct: 1 MPELPEVEALRAFLDTHLVGKEIARVLPVAISVLKTYDPP--LSAVEGAEVTAIARHGKF 58 Query: 60 LLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L + G L ++ HL +G + + P K + + + Sbjct: 59 LDLTTTGPGGELHLLFHLARAGWLRWQDPLPSGPPKPGKGPLALRTALTGGDGFDL---- 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + + + + P + LGP+P F + +K AL +Q + Sbjct: 115 TEAGTTKRLAVYVVRDPREVPGVARLGPDPLAEDFGPAEFAALLAGERRQIKGALRDQSL 174 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L AK+SP + T++L L ++ L +A++ Sbjct: 175 IAGIGNAYSDEILHAAKMSPFKPTQNLTPTET------AALYAAMRTTLHEAVERSHGLA 228 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 229 AGRLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 274 >gi|323191061|gb|EFZ76326.1| endonuclease VIII [Escherichia coli RN587/1] Length = 263 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 104/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDTPRLSYATRGQVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GEPC CG +I + + R ++C CQ Sbjct: 219 NKYHGAL------FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|322615838|gb|EFY12756.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621234|gb|EFY18091.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623654|gb|EFY20492.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628926|gb|EFY25706.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634906|gb|EFY31636.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636566|gb|EFY33270.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641775|gb|EFY38408.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647807|gb|EFY44287.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651863|gb|EFY48232.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652640|gb|EFY48989.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658448|gb|EFY54711.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664949|gb|EFY61140.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668381|gb|EFY64537.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670531|gb|EFY66664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675271|gb|EFY71347.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679697|gb|EFY75738.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684827|gb|EFY80826.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193145|gb|EFZ78364.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200596|gb|EFZ85671.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202268|gb|EFZ87316.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205465|gb|EFZ90431.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213496|gb|EFZ98289.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215330|gb|EGA00075.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220916|gb|EGA05350.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228075|gb|EGA12211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231019|gb|EGA15135.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234148|gb|EGA18237.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238157|gb|EGA22215.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243592|gb|EGA27610.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247384|gb|EGA31343.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251372|gb|EGA35244.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258489|gb|EGA42161.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260643|gb|EGA44252.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264715|gb|EGA48217.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272238|gb|EGA55650.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 263 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|161615045|ref|YP_001589010.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037134|sp|A9MTR2|END8_SALPB RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|161364409|gb|ABX68177.1| hypothetical protein SPAB_02805 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 263 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFCNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|166157053|emb|CAO79510.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 293 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I ++L + + +I + R + + KKI DV R AK + Sbjct: 1 MPELPEVHTISQDLKNNIVGYKIENIQIERNYKIPEIEKIRLGKIKDKKISDVERIAKNI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L N ++ HL M+G I+ + K I + N + + + D R Sbjct: 61 VIKLSENEFLVFHLAMTGRIILTPSKEKKDK------WTKIVFKISKNGDEKYLKFCDMR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + +++ + G + + + KN+ +KNA ++QKI++G+ Sbjct: 115 QFGKIKVLDEKSLSE--LRNKYGLDILEGNITPDKFLEIIKSKNTTIKNAFMDQKIISGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY +AL+ A ++P +T+ L+ ++++L + I G++L D Sbjct: 173 GNIYATDALFLAGINPKTRTKD------INLQKSENLLSSLKQILQEGIKNRGATLPDEM 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV I G G Q F +YGK + C CG + GR T+ C CQ Sbjct: 227 YVDIFGKPGNQQKHFKIYGK--KIC-PRCGARVSFEKINGRGTYSCPVCQ 273 >gi|326775044|ref|ZP_08234309.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326655377|gb|EGE40223.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G + V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSA-LEGTTVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + + +T + + + Sbjct: 60 DIEA-GGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLITVDGDGFDL----TEMG 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + P + LGP+P ++F+ + +K AL +Q ++AGI Sbjct: 115 TRKRLSVHLVHDPADVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L +++ + +L ++ L DA+ + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLDEDD------VTRLYTALRSTLQDAVTRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|182434517|ref|YP_001822236.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463033|dbj|BAG17553.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G + V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSA-LEGTTVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + + +T + + + Sbjct: 60 DIEA-GGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLITVDGDGFDL----TEMG 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + P + LGP+P ++F+ + +K AL +Q ++AGI Sbjct: 115 TRKRLSVHLVHDPADVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L +++ + +L ++ L DA+ + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLDEDD------VTRLYTALRSTLQDAVTRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|197251492|ref|YP_002145687.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226741118|sp|B5EZF2|END8_SALA4 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197215195|gb|ACH52592.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 263 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEI----PKTTRILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|238911659|ref|ZP_04655496.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 263 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|168820144|ref|ZP_02832144.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343055|gb|EDZ29819.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084996|emb|CBY94785.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 263 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 110/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTSEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|168230606|ref|ZP_02655664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240579|ref|ZP_02665511.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264331|ref|ZP_02686304.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467716|ref|ZP_02701553.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194450919|ref|YP_002044759.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468700|ref|ZP_03074684.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|226741122|sp|B4TBC8|END8_SALHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194409223|gb|ACF69442.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455064|gb|EDX43903.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195629189|gb|EDX48557.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205334680|gb|EDZ21444.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339977|gb|EDZ26741.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347178|gb|EDZ33809.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 263 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|204930016|ref|ZP_03221037.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321010|gb|EDZ06211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 263 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQITTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|205351992|ref|YP_002225793.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856172|ref|YP_002242823.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226741120|sp|B5QWF8|END8_SALEP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741121|sp|B5R679|END8_SALG2 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|205271773|emb|CAR36607.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707975|emb|CAR32264.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627032|gb|EGE33375.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 263 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + G S Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSYTTRGQS-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 ---DENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|167552854|ref|ZP_02346605.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322568|gb|EDZ10407.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 263 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEVC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|62179304|ref|YP_215721.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582543|ref|YP_002636341.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309746|sp|Q57RM1|END8_SALCH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783123|sp|C0PWD7|END8_SALPC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|62126937|gb|AAX64640.1| endonuclease VIII removing oxidized pyrimidines may also remove oxidized purines in absence of MutY and Fpg [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467070|gb|ACN44900.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713771|gb|EFZ05342.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 263 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 106/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLNARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSHVLL-----------DIPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|239978113|ref|ZP_04700637.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291450010|ref|ZP_06589400.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291352959|gb|EFE79861.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] Length = 286 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + TV + + L+ P + G++I V R K+ Sbjct: 1 MPELPEVEALREFLAVHAVGRTVERVLPVAFHVLKTYDPP--ATDLAGQRITAVDRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + G L ++ HL +G + T A P + + + + L + + + Sbjct: 59 LDL-TVGPLHLVTHLARAGWLKWQDTVPAAPPRPGKGPLALRVVLDDGSGFD-----LTE 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + P + LGP+P + F+ L ++ LK AL +Q ++A Sbjct: 113 AGTQKRLAVYVVRDPADVPGIARLGPDPLADGFDRDRLAALLAPESRLLKGALRDQSLIA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E L A+LSP + L T L + ++ L DA++ G Sbjct: 173 GIGNAYSDEILHAARLSPFKNAGRLTDEETT------ALYEALRTTLTDAVERGRGVAAG 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + V+GK GEPC CG IR + A S YC +CQ Sbjct: 227 HLKKEKKT-----NLRVHGKDGEPC-PVCGDTIRSVNFADSSLQYCPHCQ 270 >gi|200389798|ref|ZP_03216409.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602243|gb|EDZ00789.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 263 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIGTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|218678413|ref|ZP_03526310.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 894] Length = 230 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 103/231 (44%), Positives = 137/231 (59%), Gaps = 10/231 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGARVTRLELRRADLRFPFPDALADRVSGRIIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + A K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAGAATPGEFHHARSKDEKHDHVVFHLEGASGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVIYNDPRRFGFMDMVERADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +QK +AG+GNIYVCEALWR+ LSP + R ++ L L+ I+ Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPGPRRRHAGDGGWPAEEQLNLLVAAIRD 229 >gi|300937827|ref|ZP_07152623.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] gi|300457192|gb|EFK20685.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] Length = 263 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTVDKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSY-----ATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GRVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|320664747|gb|EFX31885.1| endonuclease VIII [Escherichia coli O157:H7 str. LSU-61] Length = 263 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNEAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|300906969|ref|ZP_07124639.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|301305199|ref|ZP_07211297.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|300401272|gb|EFJ84810.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|300839511|gb|EFK67271.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|315257630|gb|EFU37598.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 85-1] Length = 263 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|256372280|ref|YP_003110104.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] gi|256008864|gb|ACU54431.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] Length = 275 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 122/292 (41%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PEVE +R L ++ T+ I + + L A G+ I+ + R K+L Sbjct: 1 MPEAPEVERVREVLAARVEGATLEGIRMVGRRLVRRHDPELLATVSGRPIVSMRRIGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G +++VHLGM+G ++ S H + + + + DPR Sbjct: 61 VFDL-GTDALVVHLGMAGRLVVSDASATA-----THVQLVLDFR------RAVITLVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 F + + L LGP+ A L + +K ALL+Q++VAG Sbjct: 109 TFSEAFVDVLGTDGRPRRLAGLGPDVFGPEEEIAASLERHAARSRRAIKTALLDQRVVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GN+Y E L+R + P L + + V +A+ AGG++ D Sbjct: 169 LGNMYADETLFRVGVHPSTPMN-------VLGRRLVAIAEAAGDVAREALAAGGTTFADR 221 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G F +VY + G PC C I R V GRS +C CQ+ Sbjct: 222 AYRDPLDRPGAFGARLAVYQRAGSPC-PRCATSIVRRVLQGRSAHWCPRCQQ 272 >gi|283479110|emb|CAY75026.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae DSM 12163] Length = 264 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 117/292 (40%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGVEP---AQSKRVLRVRL---AAADKTLLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILWQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQA-- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKACQ-RCGETIVKTMLSSRPFYWCPGCQK 264 >gi|88706451|ref|ZP_01104156.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88699387|gb|EAQ96501.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 273 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 104/291 (35%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + TV ++ F F+ G+++++V R K L Sbjct: 1 MPEGPEIRRAADRIANVLVDETVEEVAFA-----FPELQRFTKVLSGQRVLEVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +I H + G + I K + SL +T + + Sbjct: 56 LTHFDNDYAIYSHNQLYGVWKI--------AKRGKMPATNRSLRLALHTSGHSALLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E + L + +L L+Q +AG Sbjct: 108 DISVWPREEIGMHPFLATLGPDLLSAKLAWRDISERLAMPRFAGRSLAALYLDQHFLAGS 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L+ A + P R+ R L + +L +E + + + GG +L + Sbjct: 168 GNYLRSEILFCAGVHPKRRPRDLSRGERG------RLARETLDLPRRSYETGGITLPPRL 221 Query: 241 HIDGSI---GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ + F V+G+ G PC S C IRR R ++C CQ Sbjct: 222 AATLKKTVKGFERRRFFVFGRDGRPCYS-CKDTIRRDSMGSRRIYWCPTCQ 271 >gi|157155050|ref|YP_001461874.1| endonuclease VIII [Escherichia coli E24377A] gi|193065520|ref|ZP_03046588.1| endonuclease VIII [Escherichia coli E22] gi|194429067|ref|ZP_03061598.1| endonuclease VIII [Escherichia coli B171] gi|209917964|ref|YP_002292048.1| endonuclease VIII [Escherichia coli SE11] gi|260842922|ref|YP_003220700.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|293432982|ref|ZP_06661410.1| endonuclease VIII [Escherichia coli B088] gi|300816361|ref|ZP_07096583.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300822999|ref|ZP_07103134.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300918372|ref|ZP_07134972.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300926116|ref|ZP_07141929.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|301327902|ref|ZP_07221075.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|331667079|ref|ZP_08367944.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331676394|ref|ZP_08377091.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] gi|166920089|sp|A7ZJ95|END8_ECO24 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741115|sp|B6I7Y5|END8_ECOSE RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157077080|gb|ABV16788.1| endonuclease VIII [Escherichia coli E24377A] gi|192926809|gb|EDV81435.1| endonuclease VIII [Escherichia coli E22] gi|194412898|gb|EDX29189.1| endonuclease VIII [Escherichia coli B171] gi|209911223|dbj|BAG76297.1| endonuclease VIII [Escherichia coli SE11] gi|257758069|dbj|BAI29566.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|291323801|gb|EFE63223.1| endonuclease VIII [Escherichia coli B088] gi|300414435|gb|EFJ97745.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300417815|gb|EFK01126.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|300524540|gb|EFK45609.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300531051|gb|EFK52113.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300845586|gb|EFK73346.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|320198170|gb|EFW72774.1| Endonuclease VIII [Escherichia coli EC4100B] gi|323158762|gb|EFZ44775.1| endonuclease VIII [Escherichia coli E128010] gi|323170829|gb|EFZ56479.1| endonuclease VIII [Escherichia coli LT-68] gi|323185128|gb|EFZ70494.1| endonuclease VIII [Escherichia coli 1357] gi|323947022|gb|EGB43036.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H120] gi|324020343|gb|EGB89562.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 117-3] gi|331065435|gb|EGI37328.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331075887|gb|EGI47184.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|194446665|ref|YP_002039966.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226741123|sp|B4SZD3|END8_SALNS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194405328|gb|ACF65550.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEVC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|317495934|ref|ZP_07954297.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] gi|316914111|gb|EFV35594.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] Length = 286 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 131/300 (43%), Gaps = 27/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-------HRKN---LRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L+ + N + + H +N + +F+ K I Sbjct: 1 MPELPEVENIKLGLVDQVLNKKIVGVSYSEIVKLGHSENKMTIVKQDLDYFANNVINKNI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNT 109 ++RR KYL L N II H GM+G+F + KN H H+ L Sbjct: 61 EGLTRRGKYLYFTL-SNGYIIAHFGMTGAFFVVKDIAEITNKNYYNHRHIIFELD----- 114 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 K +++Y+D RRFG + ++ ++ P + K+ +K Sbjct: 115 TKEKLVYSDIRRFGELRYIDEITMFKPFIDLAPEPFSQTAKSYFLEKLESPKYKDQPIKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL + G GNIY CE L+R K+ P+ K L + L E+ +L AI Sbjct: 175 LLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELTKKQK------ENLFDELVNILTFAI 228 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GGS++ D+VH DG G QN +YGK + C G IV R++ +C CQK Sbjct: 229 EQGGSTISDFVHSDGGEGNMQNFHQIYGK--KTCPL--GHKTDNIVIKTRASHFCPICQK 284 >gi|301020828|ref|ZP_07184892.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] gi|300398474|gb|EFJ82012.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ RK + L + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNRKAKDLSAAQLDALAD-----------ALLDIPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|307314822|ref|ZP_07594416.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|306905720|gb|EFN36248.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|315059956|gb|ADT74283.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323379483|gb|ADX51751.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Escherichia coli KO11] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTDEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ + + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLNPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|15800417|ref|NP_286429.1| endonuclease VIII [Escherichia coli O157:H7 EDL933] gi|15829993|ref|NP_308766.1| endonuclease VIII [Escherichia coli O157:H7 str. Sakai] gi|168763993|ref|ZP_02789000.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217326241|ref|ZP_03442325.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|291281646|ref|YP_003498464.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|21362529|sp|Q8X9C6|END8_ECO57 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|12513625|gb|AAG55037.1|AE005249_8 endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. EDL933] gi|13360197|dbj|BAB34162.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. Sakai] gi|189365928|gb|EDU84344.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217322462|gb|EEC30886.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|290761519|gb|ADD55480.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|320193108|gb|EFW67748.1| Endonuclease VIII [Escherichia coli O157:H7 str. EC1212] gi|320643356|gb|EFX12536.1| endonuclease VIII [Escherichia coli O157:H- str. 493-89] gi|320648705|gb|EFX17338.1| endonuclease VIII [Escherichia coli O157:H- str. H 2687] gi|320654289|gb|EFX22342.1| endonuclease VIII [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659922|gb|EFX27464.1| endonuclease VIII [Escherichia coli O55:H7 str. USDA 5905] gi|326341550|gb|EGD65340.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1044] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|293413990|ref|ZP_06656639.1| endonuclease VIII [Escherichia coli B185] gi|291434048|gb|EFF07021.1| endonuclease VIII [Escherichia coli B185] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTDEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|218553241|ref|YP_002386154.1| endonuclease VIII [Escherichia coli IAI1] gi|218694137|ref|YP_002401804.1| endonuclease VIII [Escherichia coli 55989] gi|226741112|sp|B7M5M8|END8_ECO8A RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783121|sp|B7LAC0|END8_ECO55 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218350869|emb|CAU96567.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|218360009|emb|CAQ97556.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|324116254|gb|EGC10175.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1167] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + TS + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTSEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|157146685|ref|YP_001454004.1| endonuclease VIII [Citrobacter koseri ATCC BAA-895] gi|166920088|sp|A8AJA5|END8_CITK8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157083890|gb|ABV13568.1| hypothetical protein CKO_02451 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFSQL-----KPYESPLIGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + N K ++Y+ Sbjct: 56 LTHFSQGLTLYSHNQLYGVWRVVETGNIPATT-------RVLRVNLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLATHPFLQRVGPDVLDPRLTPSDVKARLLSARFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLSDQQ------LEALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C +CQ Sbjct: 214 GQADENTHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQ 262 >gi|82775980|ref|YP_402327.1| endonuclease VIII [Shigella dysenteriae Sd197] gi|309786373|ref|ZP_07680999.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331651712|ref|ZP_08352731.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] gi|123563198|sp|Q32IL9|END8_SHIDS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81240128|gb|ABB60838.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella dysenteriae Sd197] gi|308925767|gb|EFP71248.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331049990|gb|EGI22048.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTMHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|289705862|ref|ZP_06502242.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] gi|289557405|gb|EFD50716.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] Length = 305 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 28/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPE E++RR L + ++ + P RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRSPGGADALRERLRGARLAEPARRG 60 Query: 58 KYLLIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + EG+ +++VHLGMSG +++ A H + + +T + + + + Sbjct: 61 KFLWLPLAEGDDAVVVHLGMSGQILVDEPGAADQR----HLRLRLPVTAADGSAR-ELRF 115 Query: 117 NDPRRFGFMD------LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG + + +P F+ + + + ++ S LK A Sbjct: 116 VDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPVAVHARLARRRSTLKRA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A++ Sbjct: 176 LLDQSLVSGIGNIYADEALWGARLHPERPTERMRRADTL------RLMAAVQDVMRRALE 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTF 282 GG+S YV++DG GYF + + YG+TG+PC C I R R++ Sbjct: 230 VGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPC-RRCAAEGVDTRIVREPFMNRASH 286 >gi|198244062|ref|YP_002214697.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226741119|sp|B5FNF0|END8_SALDC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197938578|gb|ACH75911.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622453|gb|EGE28798.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKVRLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + G S Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSYTTRGQS-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 ---DENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|24112009|ref|NP_706519.1| endonuclease VIII [Shigella flexneri 2a str. 301] gi|30062122|ref|NP_836293.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|110804657|ref|YP_688177.1| endonuclease VIII [Shigella flexneri 5 str. 8401] gi|57012687|sp|Q83LZ7|END8_SHIFL RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|123048356|sp|Q0T6V4|END8_SHIF8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|24050826|gb|AAN42226.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 301] gi|30040367|gb|AAP16099.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 2457T] gi|110614205|gb|ABF02872.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 5 str. 8401] gi|281599971|gb|ADA72955.1| Endonuclease VIII [Shigella flexneri 2002017] gi|313649649|gb|EFS14073.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|332760924|gb|EGJ91212.1| endonuclease VIII [Shigella flexneri 4343-70] gi|332761228|gb|EGJ91514.1| endonuclease VIII [Shigella flexneri 2747-71] gi|332763970|gb|EGJ94208.1| endonuclease VIII [Shigella flexneri K-671] gi|332768190|gb|EGJ98375.1| endonuclease VIII [Shigella flexneri 2930-71] gi|333007378|gb|EGK26858.1| endonuclease VIII [Shigella flexneri VA-6] gi|333007744|gb|EGK27220.1| endonuclease VIII [Shigella flexneri K-218] gi|333021566|gb|EGK40816.1| endonuclease VIII [Shigella flexneri K-304] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFPNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|253687624|ref|YP_003016814.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645859|sp|C6DCC8|END8_PECCP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|251754202|gb|ACT12278.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + A G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFA-----FPELKPYEAELVGQQVRQIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + + L + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETKR----DLRVRLE---TQNRAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIV 177 ++++ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IEMLTPEALTTHPFLQRIGPDVLDLSLTPEQVYERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L Q + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSQALLEIPRLSYNTRGTV-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 DENHHHGAI----FSFKVFHRDGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|320637961|gb|EFX07730.1| endonuclease VIII [Escherichia coli O157:H7 str. G5101] Length = 263 Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +G + D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGSDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|218699063|ref|YP_002406692.1| endonuclease VIII [Escherichia coli IAI39] gi|226741111|sp|B7NMR0|END8_ECO7I RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218369049|emb|CAR16803.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 263 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|82543143|ref|YP_407090.1| endonuclease VIII [Shigella boydii Sb227] gi|187732849|ref|YP_001879368.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|123560282|sp|Q324J6|END8_SHIBS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741126|sp|B2TU97|END8_SHIB3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81244554|gb|ABB65262.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella boydii Sb227] gi|187429841|gb|ACD09115.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|320175361|gb|EFW50465.1| Endonuclease VIII [Shigella dysenteriae CDC 74-1112] gi|320183672|gb|EFW58512.1| Endonuclease VIII [Shigella flexneri CDC 796-83] gi|332097678|gb|EGJ02653.1| endonuclease VIII [Shigella boydii 3594-74] Length = 263 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVGTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|326507936|dbj|BAJ86711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 110/296 (37%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR L +T + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRITRCAVADDPKVVVAAAGRVAFERAMVGRTILAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH----NHVTISLTNNTNTKKYR 113 K L + L+ GM+G+ I+ + K ++ + S Sbjct: 61 KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSADDWPSKYSKFFVELDDGLE 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D RRF + L PP+ LGP+ + KK +K LL+ Sbjct: 121 FSFTDKRRFARVRLF--DDPETVPPISELGPDALFEPMSVDNFVDSLSKKKIGIKALLLD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++GIGN E L+++K P++ SL + L Q IQ+V+ A+ Sbjct: 179 QSFISGIGNWIADEVLYQSKTHPLQIASSLTRE------SCEALHQSIQEVVKYAV---- 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + G+ G+ I I GR+T Y QK Sbjct: 229 -------DVDADCDRFPVEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPELQK 277 >gi|317047339|ref|YP_004114987.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] gi|316948956|gb|ADU68431.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] Length = 262 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 103/292 (35%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L M +TD+ L + A G + + R K L Sbjct: 1 MPEGPEIRRAADQLAAAMTGKPLTDVWFAFPQL-----KTYEPALLGATVTAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T A + + L N T Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVPTGTA----PQTARQLRVRLANVDQTILL-------Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L+ +P L+ +GP+ D S + + + LL+Q + Sbjct: 105 SASDIELLNAETLATHPFLQRVGPDVLDASLTVEAVQERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L + L + L + + V + GS + Sbjct: 165 AGLGNYLRVEILWHAQLLAQHRALDLHAAQ------IQALSEALLAVPRHSYQMRGSMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + F V+ + G+ C CG +I + V + R ++C CQ+ Sbjct: 219 YHEDA-------AFRFEVFHRQGKKC-RRCGTLIEKGVLSSRPFYWCPGCQR 262 >gi|331682145|ref|ZP_08382767.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] gi|331080569|gb|EGI51745.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] Length = 263 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTMRVLRVKL-------QTVDKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLITHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|168786866|ref|ZP_02811873.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] gi|261224415|ref|ZP_05938696.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK2000] gi|261254594|ref|ZP_05947127.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK966] gi|189373038|gb|EDU91454.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] Length = 263 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKGL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|194434000|ref|ZP_03066271.1| endonuclease VIII [Shigella dysenteriae 1012] gi|194417765|gb|EDX33863.1| endonuclease VIII [Shigella dysenteriae 1012] gi|332093762|gb|EGI98816.1| endonuclease VIII [Shigella boydii 5216-82] gi|332096522|gb|EGJ01518.1| endonuclease VIII [Shigella dysenteriae 155-74] Length = 263 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSQLIGQHVTHLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|312970791|ref|ZP_07784970.1| endonuclease VIII [Escherichia coli 1827-70] gi|310336552|gb|EFQ01719.1| endonuclease VIII [Escherichia coli 1827-70] gi|332342049|gb|AEE55383.1| endonuclease VIII [Escherichia coli UMNK88] Length = 263 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSPLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTVDKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|24987423|pdb|1K3W|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Dna gi|24987426|pdb|1K3X|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Brominated-Dna gi|51247247|pdb|1Q39|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The Wt Enzyme At 2.8 Resolution. gi|168988580|pdb|2EA0|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE PE+ NL +K +TD+ L + + G+ + V R K LL Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + K ++Y+ Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ---- 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 215 -VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|317491180|ref|ZP_07949616.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920727|gb|EFV42050.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 263 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 111/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + +T++ L H+ G+KI D+ R K L Sbjct: 1 MPEGPEIRRAADKLTDAVVGKPLTEVWFAFPQL-----KHYQPQLIGEKIEDIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + + L Sbjct: 56 LTHFSNGLTMYSHNQLYGVWKIVAAGDTPNTKR----DLRVRLETEDQAILL-------Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 + + Q+P L+ +GP+ D A + + + LL+Q+ + Sbjct: 105 SASDITIAPREEIAQHPFLQRVGPDVLDLRLTAEQVKERLMLPAFRRRQFGGLLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L+P +SL L L + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWDAELAPTHNAQSLRPEQ------LEHLSHALLEIPRLSYNTRGTMDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H FQ F V+ + GEPCL CG MI + + + R ++C CQ+ Sbjct: 219 DVHHGA----LFQ--FKVFHRAGEPCL-RCGLMIEKTMISSRPFYWCPNCQR 263 >gi|213583920|ref|ZP_03365746.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 213 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 18/224 (8%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 + II+HLGMSGS I ++ + +H+HV + ++N + Y DPRRFG Sbjct: 8 PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPRRFGAW 58 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + L LGPEP + FN YL + KK + +K L++ K+V G+GNIY Sbjct: 59 LWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYA 116 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ DG Sbjct: 117 SESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFLQSDGK 170 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 171 PGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 213 >gi|146310878|ref|YP_001175952.1| endonuclease VIII [Enterobacter sp. 638] gi|166920092|sp|A4W871|END8_ENT38 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|145317754|gb|ABP59901.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 263 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 110/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T+ L F ++ G+K+ + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTNAWFAFPQL-----KSFESSLIGQKVTQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + + + L K ++Y+ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVDAG----EHPQTSRILRVRLQ---TADKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLLTHPFLQRVGPDVLDMRLTAEEVKARLLSPKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ RK L + L L + ++ + + G Sbjct: 165 AGLGNYLRVEILWEVGLAAQRKASQLSEEQ------LDALSHALLEIPRLSYNTRGV--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + G+ C CG +I R + R + C CQK Sbjct: 216 --VDDNKHHGAL-FRFKVFHREGKAC-ERCGGVIERSTLSSRPFYGCPVCQK 263 >gi|312171755|emb|CBX80013.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 264 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L +K +TD+ L + G++II + R K L Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVWFAFPAL-----QTYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ + + L T Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGAEP---AQSKRVLRVRLAAADQTLLL-------Y 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 106 SASDIQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A L+ K +L + + + Sbjct: 166 AGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKV-------- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|331662067|ref|ZP_08362990.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] gi|331060489|gb|EGI32453.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] Length = 263 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKD-----------LSAAQLDALADALLDIPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|292487647|ref|YP_003530520.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] gi|292898884|ref|YP_003538253.1| endonuclease VIII [Erwinia amylovora ATCC 49946] gi|291198732|emb|CBJ45841.1| endonuclease VIII (DNA N-glycosylase/AP lyase) [Erwinia amylovora ATCC 49946] gi|291553067|emb|CBA20112.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] Length = 264 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L +K +TD+ L + G++II + R K L Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVWFAFPAL-----QTYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ + + L T Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGAEP---AESKRVLRVRLAAADQTLLL-------Y 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 106 SASDIQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A L+ K +L + + + Sbjct: 166 AGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKV-------- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|242096492|ref|XP_002438736.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] gi|241916959|gb|EER90103.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] Length = 399 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 114/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR L + + + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDDKVVVAAAGRAAFERAMVGRTIVAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYR 113 K L ++L+ GM+G+ I+ ++ ++ S Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGVPVTNYKRSVVNSEEEWPSKYSKFFAELDDGLE 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D RRF + L E PP+ LGP+ + +K +K LL+ Sbjct: 121 FSFTDKRRFARVRLFE--DPETVPPISELGPDALFEPMSVDDFLDSLGRKKIGIKALLLD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++GIGN E L+++++ P++ + P++ L + IQ+V+ A+ Sbjct: 179 QSFISGIGNWIADEVLYQSRIHPLQIASN------LPRESCEALHRSIQEVVKYAV---- 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D + F + + + G+ G+ I I GR+T Y QK Sbjct: 229 -------EVDADMDRFPKEWLFHHRWGKKPGKVNGKKIEFITAGGRTTAYVPQLQK 277 >gi|291298922|ref|YP_003510200.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290568142|gb|ADD41107.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 286 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + F A G++I V R K+L Sbjct: 1 MPELPEVEALADFLRRRAVSHEVKRVDVASITALKTFDPP-PTALHGRRITAVDRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 ++ +G +I HL +G A P++ +H + ++L + + Sbjct: 60 DLDADGT-HLIFHLARAGWLRWNDKLAATPLRPGKHPLALRLALDDGSGFDLSE-----A 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + S Q P + LGP+P SF + + +K L +QK++AG Sbjct: 114 GTKKRLAVYVVSDPAQVPGIAGLGPDPLAESFTEAAFAAVLSGRRTQIKGLLRDQKLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + SL + + L + + L A+ A S Sbjct: 174 IGNAYSDEILHAARMSPFKLADSLTDTDVSV------LYEAMVDTLRTAVAASSGSAAKD 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+G+ G+PC CG I + A + YC CQ Sbjct: 228 LKAHKH-----DSLRVHGRAGQPC-PVCGDTIAEVSFADSALQYCPTCQ 270 >gi|156934788|ref|YP_001438704.1| endonuclease VIII [Cronobacter sakazakii ATCC BAA-894] gi|166920093|sp|A7MQW6|END8_ENTS8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|156533042|gb|ABU77868.1| hypothetical protein ESA_02628 [Cronobacter sakazakii ATCC BAA-894] Length = 263 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 103/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + +T + F F A G ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAVAGKPLTHVWFA-----FPELKAFEAQLTGARVERFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + + L ++Y+ Sbjct: 56 LTHFSCGLTLYSHNQLYGVWRVVKAGETPQTTR----SLRVRLETED---AAVLLYSASE 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +++++ + L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLDADGVAAHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K L L L + ++ + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPRHKAIELNNTQ------LDALARACLEIPRLSYQTRGT--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFEVFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|227327538|ref|ZP_03831562.1| endonuclease VIII [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 263 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + A G+++ + R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFA-----FPELKLYEAELVGQQVRQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + + L + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETKR----DLRVRLE---TQDRAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIV 177 ++++ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IEMLTLETLSTHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSHALLEIPRLSYNTRGT--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G +F V+ + GE C CG +I R + + R ++C +CQK Sbjct: 216 --VDENRHHGAI-FSFKVFHREGERC-ERCGGIIERTMLSSRPFYWCPHCQK 263 >gi|320179452|gb|EFW54409.1| Endonuclease VIII [Shigella boydii ATCC 9905] Length = 263 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KSYQSQLIGQHVTHLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQVFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRFSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|209526485|ref|ZP_03275012.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] gi|209493120|gb|EDZ93448.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] Length = 288 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 40/294 (13%) Query: 19 KNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL--------- 68 N + + + F A I RR KYLL +L+ Sbjct: 3 LNQPIVGADVLLDSAIAHPTAVEFIAQLTNTTINHWYRRGKYLLAQLQAPSQPSNPIFTS 62 Query: 69 ------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + VHL M+G + + H V + L + + Sbjct: 63 KDPIETKTSDGGWLGVHLRMTGQLLWLTSDQPLHK----HTRVRLFLQGER-----ELRF 113 Query: 117 NDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + V + LR LGPEP + F+ YL ++ + +K ALL+Q Sbjct: 114 VDQRTFGKIWWVPPGMAVMDVISGLRELGPEPLSDEFSPEYLANKLRLRQRPIKTALLDQ 173 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY EAL+ A + P +R L ++ + +L I +VL +AI +GG+ Sbjct: 174 AILAGLGNIYADEALFLAGIQPTTPSRRLSEDQ------VNRLCTHIVEVLQEAIASGGT 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++R+++++ G G + + VY + G+PC C I +I +GR T +C CQ Sbjct: 228 TIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RVCQTPIAKIKLSGRGTHFCPRCQ 280 >gi|293409085|ref|ZP_06652661.1| endonuclease VIII [Escherichia coli B354] gi|291469553|gb|EFF12037.1| endonuclease VIII [Escherichia coli B354] Length = 263 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 104/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K + D+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLIDVWFAFPQL-----EPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLSYATRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|16759667|ref|NP_455284.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142560|ref|NP_805902.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213053352|ref|ZP_03346230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213421167|ref|ZP_03354233.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425379|ref|ZP_03358129.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213613308|ref|ZP_03371134.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646614|ref|ZP_03376667.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854151|ref|ZP_03382683.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824383|ref|ZP_06543976.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362531|sp|Q8Z8D2|END8_SALTI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|25289592|pir||AD0590 endonuclease VIII, DNA N-glycosylase with an AP lyase activity STY0771 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501960|emb|CAD05190.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhi] gi|29138191|gb|AAO69762.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 263 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 263 >gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 135 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 108/289 (37%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + VT + + R+ F G I + RRAK+L Sbjct: 1 MPELPEMENYRLLLNERIAGQKVTGVEVTREKTINVPVQSFLKEVNGTIIEHIDRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +++HL + G + + T T ++ Sbjct: 61 IFKLSNGKRLVLHLMLGGVLFLGNGENDPDRTRQV-----------TLTIGKIELFFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ LV + P + + + L+NQK ++GI Sbjct: 110 RLGYLHLVTQEEMEEQFKDLGPEPLQITIDAFNELIKKRKGMLKTT----LVNQKFISGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A+L P RK L + L Q IQ VL I GG Sbjct: 166 GNLYSDEICYEARLLPERKMNELSTQE------VLDLFQSIQHVLRRGISQGGYM-DPLF 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D G + VY + GE C S C I R + R FYC CQK Sbjct: 219 NGDAQTGNY--HAFVYDREGEAC-SRCQTHIVREEISSRKCFYCPNCQK 264 >gi|310767016|gb|ADP11966.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 264 Score = 135 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 115/292 (39%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H + G + I ++ + + L K ++Y+ Sbjct: 56 LTHFSNGQTLYSHNQLYGVWRIINSGVEP---AQSKRVLRVRL---AAADKTLLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLATHPFLQRAGPDVLDRALTAEQVRERLLSKRFRLRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L +A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILRQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQA-- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKACQ-RCGETIVKTMLSSRPFYWCPGCQK 264 >gi|118468423|ref|YP_889782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118169710|gb|ABK70606.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 288 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 106/291 (36%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L V+ + + ++ F AA G + R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGRVVSRVDVSALSVLKTFDPP-VAALHGSTVTAAHRWGKYL 59 Query: 61 LIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E+E L +I HL +G P+K + ++ Sbjct: 60 GMEVESGGAPLHLITHLSRAGWLRWSDKLAPTPLKPGKGPIALRVHLGDSQGFDLTEAGT 119 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R ++ + + P S ++ L + +K + +QK++ Sbjct: 120 QKRLAVWVVRDPMDVP------QIASLGPDALSLDSTALAGVLAGNSGRIKTVITDQKVM 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AKLSP L L L + VL DA+ Sbjct: 174 AGIGNAYSDEILHVAKLSPFTTAGKLTDAQ------LGALHDAMITVLTDAVSRSVG--- 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 225 --QQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 272 >gi|261822349|ref|YP_003260455.1| endonuclease VIII [Pectobacterium wasabiae WPP163] gi|261606362|gb|ACX88848.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium wasabiae WPP163] Length = 263 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + G+++ + K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFA-----FPELKPYETQLVGQQVRQIETHGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + I L + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVANAGESPETKR----DLRIRLE---TQDRAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIV 177 ++++ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IEMLTQETLATHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTASQLNEEQ------LQTLSRALLEIPRLSYNTRGTV-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 DENHHHGAI----FSFKVFHREGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|189425027|ref|YP_001952204.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] gi|189421286|gb|ACD95684.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] Length = 271 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 36/296 (12%) Query: 1 MPELPEVEIIRRNL---MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + + L + V ++ + R ++ G DV R Sbjct: 1 MPELPEVESVLQCLTTSNPSLIGRLVREVRILRNSVIDGEASAVVQTVTGSTCCDVYRHG 60 Query: 58 KYLLIELEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL +G+ + +HL M+G + + +H + L + Sbjct: 61 KYLFFGFQGHSASKRVWLALHLRMTGRLFLV----PEQEIAERHTRFALLLDHG-----L 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + ++DPR FG + LV+ + + ++ LK LL Sbjct: 112 ALRFDDPRAFGRVWLVDDPSEVTSKLGPDALLIQQKTFLDRLHGAR------RQLKPLLL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q VAG+GNIY E L+RA+L P R + L + + + VL+ A+ A Sbjct: 166 DQGFVAGVGNIYADETLFRAQLHPARLSADLTSSE------AERFYHALHGVLVQAVAAK 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+++ G F +VYG+ G PC+ CG +I + R T +C CQ Sbjct: 220 GANIDGVF----EAGSFP--VAVYGRGGRPCI-VCGTLIVKERLGQRGTHFCPVCQ 268 >gi|170768967|ref|ZP_02903420.1| endonuclease VIII [Escherichia albertii TW07627] gi|170122039|gb|EDS90970.1| endonuclease VIII [Escherichia albertii TW07627] Length = 263 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 107/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KLYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSDGLTLYSHNQLYGVWRVADTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTAHPFLQRVGPDVLDPNLTSEMVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L+ I + R Sbjct: 165 AGLGNYLRVEILWQIGLTGRHKAKDLNAQQLDVLS--HALLD---------IPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + GE C CG I + + + R ++C CQ+ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEQC-ERCGSTIEKTMLSSRPFYWCPGCQR 263 >gi|226226067|ref|YP_002760173.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226089258|dbj|BAH37703.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 264 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 122/289 (42%), Gaps = 26/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L + TV + + P A G + V RRAK Sbjct: 1 MPELPEVEYAASQLRDRVLGQTVQAVRVTHAAQARHLPSTDQQAIVGLTLDRVERRAKVQ 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + VH M+G ++ + +P ++L + RV DPR Sbjct: 61 LLHFGS-GVLEVHFRMTGDWVFSR------VTDPVPPFERLALETDAG---LRVSLVDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +GPEP ++F+ H ++ +K LL+Q++VAGI Sbjct: 111 ALSVVRWHAAGSYR----GLEVGPEPLSDAFSVDVFRHALTRRRGPIKPVLLDQRVVAGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EALW A ++P ++ K L +L I+ VL A R + Sbjct: 167 GNIYASEALWEAGIAPTAIANTIT------KPRLTRLRDAIRVVLETA-----PDARYFE 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G PC CG IRR+VQAGRST+YC CQ+ Sbjct: 216 RDTPDEQERDRRWRVYGRDGRPC-RRCGSAIRRLVQAGRSTYYCAVCQR 263 >gi|87312113|ref|ZP_01094219.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] gi|87285209|gb|EAQ77137.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] Length = 281 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ ++ VTD+ C R L F T +++ + R Sbjct: 1 MPELPEVETMRRGILSIIGGK-VTDVAKPPCARRPILLAPGIAAFRRRTVDRRVTAIDRV 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K ++I LEG I++ M+G ++ P H+ ++ + + Sbjct: 60 GKRVVIVLEGGDRIVLEPRMTGLVLVAD--------PPTREHLRWEMSLADCGVEKVWFW 111 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + RR + + ++ + P + L + K +K ALL+QK Sbjct: 112 D--RRGLGSVRLFSEREFVAEFSESGKIGPDALVISWQELRDRLAKSRRAVKVALLDQKG 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GN+Y E L AK+ P ++ + VL +AI GS+L Sbjct: 170 VCGVGNLYAAELLHVAKVHPATPC------EALSTAAWKRIHAAMVDVLQEAIKYEGSTL 223 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VYG+ GE C + + RIVQA R+TFYC CQK Sbjct: 224 GDGTYRNALNKDGGYQNCHRVYGREGELCRTCGKVEVIRIVQAQRATFYCERCQK 278 >gi|300782065|ref|YP_003762356.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299791579|gb|ADJ41954.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 286 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L T+ I + ++ ++ G++I +R K+L Sbjct: 1 MPELPEVEALAHHLRENAVGRTIFRIDVASLSVLKTATPPWTE-LHGREITGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+L ++VHL +G A P+K + + + + + Sbjct: 60 DV-VAGDLHLVVHLARAGWLRWSDGLAAAPLKPGKGPISLRVHLESATGPGFDLTEAGTK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V+ + +A L F KN+ LK AL +Q ++AGI Sbjct: 119 KGLAVWVVKDPQEIASVARLGPDALA----VDAAQLRELFAGKNTRLKWALTDQSLLAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + RAKLSP L + L L + I + DA++ Sbjct: 175 GNAYSDEIMHRAKLSPYATIGKLDEG------ALETLAEAIHDIETDAVERSVG-----Q 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR I A +S YC CQ Sbjct: 224 KAARLKGEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCPTCQ 270 >gi|293397240|ref|ZP_06641513.1| endonuclease 8 [Serratia odorifera DSM 4582] gi|291420260|gb|EFE93516.1| endonuclease 8 [Serratia odorifera DSM 4582] Length = 263 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L + +T++ LR P G++I+ + R K L Sbjct: 1 MPEGPEIRRAADSLAAAVLEQPLTEVWFAFAQLRHYQPE-----LIGQRIVAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + K + ++ ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWKVAKAGETPTTKRDLRVRL-------QTAQQAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L +P L+ +GP+ D + +T + L LL+Q + Sbjct: 109 ----ITLGPREEIAMHPFLQRIGPDVLDMALTQRQVTQRLLAPAFCRRQLGGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L+P + R L + L +L Q I + + G + Sbjct: 165 AGLGNYLRAEILWLAQLAPQHRPRDLSAD------ALQRLAQAILALPRLSYQTRGQAND 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D H +F V+ ++GEPCL CG MI + + R ++C CQ Sbjct: 219 DVHHGAL------FSFKVFHRSGEPCL-RCGAMIVKTTLSSRPFYWCPNCQ 262 >gi|302538173|ref|ZP_07290515.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302447068|gb|EFL18884.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 286 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 112/289 (38%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + V + L L+ P AA G+ V+R K+ Sbjct: 1 MPELPEVEALREFLDEHLAGRVVERVLPLAVSVLKTYDPP--PAALEGQPAGPVARYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + + G L ++ HL +G A+P + + + + Sbjct: 59 LALRV-GGLHLVTHLARAGWLRWREEFPAQPPRPGKGPLALRLVLEGGGGFDL----TEA 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + P + LGP+P + F + +K L +Q ++AG Sbjct: 114 GTQKRLAVYVVHDPQEVPGIARLGPDPLADGFGREAFAALLAGERRQIKGVLRDQSVIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP + S + T L ++ L +A++ Sbjct: 174 IGNAYSDEILHAAKVSPFKLAASFDEEQVTH------LYGAVRDTLREAVERAHGLAAQD 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GEPC CG +R + A S YC CQ Sbjct: 228 LKAEKKSG-----LRVHGRDGEPC-PVCGDTVRSVSFADSSLQYCPTCQ 270 >gi|329947034|ref|ZP_08294446.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] gi|328526845|gb|EGF53858.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] Length = 351 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 129/346 (37%), Gaps = 71/346 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + V RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTGVEVLDPRPLRRQDGGVRAFVDQLTGRTVTAVVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN------------------------ 93 K+L + L+ ++ HLGMSG ++ TS A Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTSPAAASDRDPAIRSAAAFLVDPDTRLGRRPVD 120 Query: 94 ----------------PQHNHVTISLTNN-------------------TNTKKYRVIYND 118 P+H V + L+++ + Sbjct: 121 LSATERPRYVRDISASPRHLRVRVHLSSDPSADGTDGAVLDLVDQRMLGGLHVVDLTPTV 180 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 G E L + +PA + + +K LL+Q +V+ Sbjct: 181 DGAPGGAGSPEPLLPADATHIARDLLDPALELAGPTGVVARVRASRRAIKTLLLDQGLVS 240 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW A + +R + ++ ++++ +V+ A++AGG+S Sbjct: 241 GIGNIYADEGLWEAGVHGLRLGTA------LDTRVVARILEATAEVMRRALEAGGTSFDA 294 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS-TF 282 YV ++G+ G+F YG+ G+ C CG + R GRS T+ Sbjct: 295 LYVDVEGASGFFARELGAYGRQGQAC-RRCGTTMLREALGGRSHTY 339 >gi|222635968|gb|EEE66100.1| hypothetical protein OsJ_22131 [Oryza sativa Japonica Group] Length = 405 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPH---HFSAATRGKKIIDVSRR 56 MPELPEVE RR L + + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKY 112 K L + L+ GM+G+ I+ K + + S Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D RRF + L E PP+ LGP+ ++ +K +K LL Sbjct: 121 EFSFTDKRRFARVRLFE--DPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L++++ P++ SL + L Q IQ+V+ A+ Sbjct: 179 DQSFISGIGNWIADEVLYQSRTHPLQIASSLSRE------SCEALHQSIQEVVKYAV--- 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + G+ GQ I I GR+T Y QK Sbjct: 230 --------EVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQK 278 >gi|115469160|ref|NP_001058179.1| Os06g0643600 [Oryza sativa Japonica Group] gi|51535473|dbj|BAD37370.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|51535507|dbj|BAD37426.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|113596219|dbj|BAF20093.1| Os06g0643600 [Oryza sativa Japonica Group] gi|215694501|dbj|BAG89494.1| unnamed protein product [Oryza sativa Japonica Group] Length = 400 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPH---HFSAATRGKKIIDVSRR 56 MPELPEVE RR L + + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKY 112 K L + L+ GM+G+ I+ K + + S Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D RRF + L E PP+ LGP+ ++ +K +K LL Sbjct: 121 EFSFTDKRRFARVRLFE--DPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L++++ P++ SL + L Q IQ+V+ A+ Sbjct: 179 DQSFISGIGNWIADEVLYQSRTHPLQIASSLSRE------SCEALHQSIQEVVKYAV--- 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + G+ GQ I I GR+T Y QK Sbjct: 230 --------EVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQK 278 >gi|329894679|ref|ZP_08270483.1| Endonuclease VIII [gamma proteobacterium IMCC3088] gi|328922841|gb|EGG30171.1| Endonuclease VIII [gamma proteobacterium IMCC3088] Length = 275 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 105/294 (35%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + + L F G ++ D+ R K L Sbjct: 1 MPEGPEIRRAADRIAKVVAGRVIEHVEFGLPRL-----QEFEGMLSGLRVTDLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +L++ H + G + + + ++ + +T T + Sbjct: 56 LTHFDNDLTLYSHNQLYGRWYVVKRD------RMPKTNRSLRVALHTATHSAVL-----Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKIV 177 ++++ + L +GP+ + Q + L + L+Q + Sbjct: 105 SASDIEVLTADELITHKFLSRIGPDILSKDLVPQRVVEQLEHAKFQGRKLAHLYLDQGFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A+++P + + L L + + A G + Sbjct: 165 AGVGNYLRSEILFEARVNPNLRPKDLSPAQRM------ALGEATLDISKRAYKTAGITND 218 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G Q V+ + G PC CG + ++ +GR +YC CQ Sbjct: 219 LERVALLKEQGVKRSQFRHHVFARQGRPCYE-CGTKVTKVDLSGRRLYYCAMCQ 271 >gi|50120294|ref|YP_049461.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] gi|57012664|sp|Q6D7H0|END8_ERWCT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|49610820|emb|CAG74265.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] Length = 263 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 114/291 (39%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + G+++ + R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFA-----FPELKPYETELVGQQVRQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + I L + ++Y+ Sbjct: 56 LTYFSHDRVLYSHNQLYGVWRVVNAGESPETKR----DLRIRLE---TQDRAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIV 177 ++++ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IEMLTLDTLTAHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTASQLNEEQ------LQTLSRALLEIPRLSYNTRGT--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G +F V+ + GE C CG I R + + R ++C +CQ Sbjct: 216 --VDENRHHGAI-FSFKVFHREGESC-ERCGGTIERTMLSSRPFYWCPHCQ 262 >gi|284106932|ref|ZP_06386312.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] gi|283830005|gb|EFC34282.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] Length = 275 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 131/292 (44%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK-- 58 MPELPE E++RR + + T+ I + R ++ S G ++++V R K Sbjct: 1 MPELPEAEVVRRQVQAAVVGSTIDRIWIGRDDIIRQGLESLSWY-AGARVVEVQRHGKSV 59 Query: 59 -YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + G ++ LGM+G + S H H+ + L N + V Y Sbjct: 60 VLICERDAGRRVVVAELGMTGLLLFARESVPSEK----HVHMIMRLANG---PQPEVWYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + RRFG + L++ + + R + + +K LLNQ + Sbjct: 113 NARRFGRLYLLDQT---AWQAYRQRRFGCDPFTMTEVEFVDVIKSCRGRIKAVLLNQHRI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ + P + L + + L +Q+VL +AI GGSS+R Sbjct: 170 AGIGNIYANEVLFRSGIHPHARGCRLSRRR------IRVLFDTMQRVLEEAIRLGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V DG+ G FQ+ VY K G C + CG I+ RS+F C CQK Sbjct: 224 DFVAPDGTRGQFQDRHVVYQKKGAHCPNGCGTRIQ-CFMNERSSFVCPACQK 274 >gi|16764098|ref|NP_459713.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993004|ref|ZP_02574099.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262231|ref|ZP_03162305.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|325530041|sp|E1W9M1|END8_SALTS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|325530042|sp|P0CL05|END8_SALTY RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|16419237|gb|AAL19672.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240486|gb|EDY23106.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328917|gb|EDZ15681.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245991|emb|CBG23793.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992466|gb|ACY87351.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157319|emb|CBW16808.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911755|dbj|BAJ35729.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226304|gb|EFX51355.1| Endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129038|gb|ADX16468.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987665|gb|AEF06648.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 263 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F ++ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKLFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|329998798|ref|ZP_08303217.1| endonuclease VIII [Klebsiella sp. MS 92-3] gi|328538553|gb|EGF64659.1| endonuclease VIII [Klebsiella sp. MS 92-3] Length = 263 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLTGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + ++ + + + L K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----VEPQSNRVLRVRLQ---TASKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 109 ----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + + G Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALARALLDIPRLSYRTRG---- 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 215 -LVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|237730681|ref|ZP_04561162.1| endonuclease VIII [Citrobacter sp. 30_2] gi|226906220|gb|EEH92138.1| endonuclease VIII [Citrobacter sp. 30_2] Length = 263 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ + L + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLTDVWFAFEQL-----KPYQSQLIGQRVTQLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H + G + + T + + L + T Sbjct: 56 LTHFSNGQTLYSHNQLYGVWRVVDTGKIPQTSR----VLRVRLQTHDKTILL-------Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 105 SASDIEMLTPEQLTTHPFLQRVGPDVLDLRLTPDEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L L +L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKASQLSDEQ------LDQLANALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + + R ++C CQ Sbjct: 214 GLVDENKHHGAL-FRFKVFHRDGETC-ERCGGIIEKTMLSSRPFYWCPGCQ 262 >gi|325962918|ref|YP_004240824.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469005|gb|ADX72690.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 289 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ TV+ + + + FSA G+ + V R K++ Sbjct: 1 MPELPEVAGLAGFLDEHLRGSTVSKVQIVSFAVLKTADPPFSA-LEGRTVTGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 I+ +G + HL +G + +K + H ++ T + + + Sbjct: 60 SIDTDGISFV-FHLARAGWIRFTDSPTDAQLKMGKGHIAARLAFTGPGGPRGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V P + TLGP+P +F+A L + +K L NQ ++AG Sbjct: 119 KKSLAVYVVR--DPQDVPGIATLGPDPFAEAFDAGMLAEILAGSSQQIKGLLRNQGVIAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DAGGSSLRD 238 IGN Y E L A++SP +SL + + L I VL A+ +A G +D Sbjct: 177 IGNAYSDEILHAARISPFATAKSLDRE------TVQVLYNAIHDVLGTALAEAAGKPPKD 230 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+ +TG+PC CG +R + A + YC CQ Sbjct: 231 LKDVK------RSHMRVHARTGQPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|255027263|ref|ZP_05299249.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-003] Length = 214 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 16/217 (7%) Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HL M G F + + + +H H+ ++T + + D R+FG M++ Sbjct: 14 HLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHT-----ELRFLDVRKFGTMEVTNKYG 64 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + + ++ LGPEP +F K + +K ALL+QK+VAG+GNIY E + A Sbjct: 65 EGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEA 124 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 K+ P R SL + ++ + + ++ +A+ GGS++R YV+ G +G +QN Sbjct: 125 KVRPERAANSLSDKE------IKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNK 178 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 179 LKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 214 >gi|152969290|ref|YP_001334399.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166920094|sp|A6T6E8|END8_KLEP7 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|150954139|gb|ABR76169.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 263 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLTGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + ++ + + + L K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----VEPQSNRVLRVRLQ---TASKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 109 ----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYRTRG---- 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 215 -LVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|119475797|ref|ZP_01616149.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] gi|119450424|gb|EAW31658.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] Length = 279 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 105/292 (35%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+KN TV I L + F +G K++ + R K L Sbjct: 1 MPEGPEIRRAADKIEAVLKNKTVEKIEFGLPAL-----NPFVRPLQGSKVLSLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + L+I H + G + + L +T ++ + Sbjct: 56 LTHFDSGLTIYSHNQLYGVWHVVKRDKLPKTNR--------QLRLAIHTDQHSALLFSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P+ L + L+Q +AG+ Sbjct: 108 DITVWETQHIEEHHFLKRIGPDILNPSLAWRTVADRLQSKAFAGRALSSVYLDQAFLAGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L+ A + P K+R L K + KL + +V + G ++ + Sbjct: 168 GNYLRSEILFIAGIHPSCKSRDLS------KGQIGKLARTTLEVSQRSYSLAGVTIPERQ 221 Query: 241 H-IDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G Y + F V+G+ G+PC C I+R R + C+ CQ+ Sbjct: 222 YKVLKKQGVTYGKARFFVFGRAGKPC-RVCQTKIQRSTANSRRIYTCSTCQR 272 >gi|283834003|ref|ZP_06353744.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] gi|291070140|gb|EFE08249.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] Length = 263 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 105/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K + D+ + L + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLMDVWFAFEQL-----KPYQSQLIGQRVTRLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVETGNVPQTSRVLRVRLQTR-------DKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IDMLTPEQLTTHPFLQRVGPDVLDLRLTPDDVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L L L + + + + G Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKASQLSDEQ------LDALAHALLDIPRLSYNTRG---- 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 215 -LVDENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|239945857|ref|ZP_04697794.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239992325|ref|ZP_04712989.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291449313|ref|ZP_06588703.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291352260|gb|EFE79164.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A ++ V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLTA-LERTRVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 IE G L + HL +G + + A P + + + + T+ + Sbjct: 60 DIEA-GGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLVTTDGDGFDLTEMGTKKS 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + P + TLGP+P ++F+ +K AL +Q ++AG Sbjct: 119 LSVHLVH-----DPVDVPRIATLGPDPLADTFDRDAFAALLAGARRQIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP ++T L +++ + +L ++ + DA+D Sbjct: 174 IGNAYSDEILHVAKMSPFKRTADLTEDD------VTRLYTALRTTVRDAVDRSSGVEAGK 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG I + + S YC CQ Sbjct: 228 LKAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|39939160|ref|NP_950926.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] gi|39722269|dbj|BAD04759.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] Length = 276 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+II L + + + + + + F I+D+ R+ K+L Sbjct: 1 MPELPEVQIIVDFLKKKLIGKKIVATKVFYETVVKNT-KEFQK-IEQTTILDIQRKGKFL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L L +I HL M G I+ K + H I L + K + Y D R Sbjct: 59 LFFLTQELVLIGHLRMEGKLFIKPCDEPKHK----YEHFAIILED-----KSSLRYYDFR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ ++ L L +P + N L + K S LK LLNQKI++G+ Sbjct: 110 KFGRFEVKNQNIFLTQTTLHQLALDPFE--INPAVLYQKILKTKSALKKVLLNQKIISGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ KL P K L + +++ QKVL AI GG+++ + Sbjct: 168 GNIYVNEVLFLVKLHPETKACELSLEQ------VQEIVTISQKVLTKAIKMGGTTVSTFE 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G IGYFQN V+GK +PC+ NC I +I GR T+ C CQ Sbjct: 222 SQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPVCQ 268 >gi|262041218|ref|ZP_06014430.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041447|gb|EEW42506.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 263 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + ++ + + + L K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----VEPQSNRVLRVRLQ---TASKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 109 ----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYRTRG---- 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 215 -LVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|218887537|ref|YP_002436858.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|122891668|dbj|BAF45151.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758491|gb|ACL09390.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 336 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 83/353 (23%), Positives = 124/353 (35%), Gaps = 83/353 (23%) Query: 1 MPELPEVEIIRRNLMMVMK---------------------------NMTVTDICLHRKNL 33 MPELPEVE I L + + + R L Sbjct: 1 MPELPEVETIACGLRPQLTGRRIVSVLVRNEGTVQGDAAAFARCVPGRVIAGVG-RRGKL 59 Query: 34 RF--------------------------------DFPHHFSAATR-----GKKIIDVSRR 56 + P + GK + Sbjct: 60 LLMELAPPGGPDAPDATGGGAGGPDAAGAAGTGTNVPPDAADLMACRDAAGKMAGSSATG 119 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 A + VHL M+G + A H V L + R+ + Sbjct: 120 ATGAAGGNRVPHLLGVHLKMTGRLFVYGPEVA----PNTHTRVVFGLDDGN-----RLFF 170 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +D R+FG++ + + + R P A F + +K LL+Q + Sbjct: 171 DDARKFGYVRALSDADLATWDFWR--SLGPEPLEIAAPDFAALFRGRRGRIKALLLDQTV 228 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E+L+RA + P + L L + VL ++I GSS+ Sbjct: 229 IAGIGNIYADESLFRASIRPDAQAGELSPERLCV------LHGHLVDVLRESIAECGSSI 282 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY G G FQN F VYG++G+PC++ CG+ + AGR+T +C CQK Sbjct: 283 RDYRDAHGDAGAFQNRFRVYGRSGQPCVA-CGRALTTGKVAGRTTVFCERCQK 334 >gi|331694040|ref|YP_004330279.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326948729|gb|AEA22426.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 291 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + ++L V + + ++ F ++A G+ + SR K+L Sbjct: 1 MPELPEVEALAQHLRDHAVYRPVARVDVASMSVLKTFEPP-ASALVGRVVTGASRYGKFL 59 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +E L++I HL +G T+ A P K + + + + Sbjct: 60 SVEFHDRPGDELALITHLSRAGWLRWHATASATPPKPGRGPLALRVHLDTVGGPGFDLTE 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + LV + A L + + +++QK Sbjct: 120 AGTQKRLAVYLVHDPQEVPGIAKLGPDALALSRDELAELLAGHTERIKT----LIVDQKT 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L A+LSP + L L L + ++ VL DA++ Sbjct: 176 IAGIGNAYSDEILHTARLSPYAVSGRLRPEQ------LDALYEAMRTVLTDAVERSVG-- 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A RS YC CQ Sbjct: 228 ---QGAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFAERSFQYCPGCQ 275 >gi|311280406|ref|YP_003942637.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] gi|308749601|gb|ADO49353.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] Length = 263 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T + L + G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTGVWFAFPQL-----AQYQLLLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + + +K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVEAGTLPDTTRVLRVKL-------QTAEKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLATHPFLQRVGPDVLDMALTPECVRARLLLPSFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L L L + + + G++ Sbjct: 165 AGLGNYLRVEILWQVGLTAQHKASGLSDAQ------LDALCHALLDIPRLSYRTRGNADD 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H F V+ + GE C CG +I + +QA R ++C CQ Sbjct: 219 NKHHGAL------FRFKVFHRDGETC-ERCGGIIAKTLQASRPFYWCPGCQ 262 >gi|260597118|ref|YP_003209689.1| endonuclease VIII [Cronobacter turicensis z3032] gi|260216295|emb|CBA29259.1| Endonuclease 8 [Cronobacter turicensis z3032] Length = 263 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 103/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T + F F A G ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAVADKPLTHVWFA-----FPELKAFEAPLTGARVERFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + + L ++Y+ Sbjct: 56 LTHFSCGLTLYSHNQLYGVWRVVKAGETPQTTR----SLRVRLETED---AAVLLYSASE 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +++++ + L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLDADGVAAHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K L L + ++ + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPRHKAIE------LNNMQLDALARACLEIPRLSYQTRGT--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFEVFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|312138559|ref|YP_004005895.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325676377|ref|ZP_08156056.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|311887898|emb|CBH47210.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325552938|gb|EGD22621.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + L V + + ++ F ++ +G+ + R K+L Sbjct: 1 MPELPEVEALAQFLRDHAVGAVVGRVDVAALSVLKTFDPPITS-LQGRNVTGADRFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L +I HL G + P K + + + + Sbjct: 60 ALD-CDGLWLIAHLSRGGWLRWIDNPGSAPPKPGKGPLAVRVHFFTPDGETPAFDLTEAG 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P + LGP+ + + S +K AL++Q ++AGI Sbjct: 119 TKKRLAVWVVTDPLLVPGIARLGPDALEVTRPQFG--EILAGTTSRIKTALVDQSLLAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP T L + + +L ++ L DA++ Sbjct: 177 GNAYSDEILHAARLSPFATTSKLAPDE------VDRLYDAMRAELSDAVERSVG-----Q 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + +V+ +TG PC CG +R + A RS YC CQ Sbjct: 226 EAARLKGEKRAGMTVHARTGMPC-PVCGDTVREVAYAERSFQYCPTCQ 272 >gi|226498176|ref|NP_001141023.1| hypothetical protein LOC100273102 [Zea mays] gi|194699240|gb|ACF83704.1| unknown [Zea mays] Length = 384 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 114/301 (37%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE RR L + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTS---------CAKPIKNPQHNHVTISLTNNTN 108 K L ++L+ GM+G+ I+ ++ +H+ L + Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L E PP+ LGP+ + +K +K Sbjct: 119 ---LEFSFTDKRRFARVRLFE--DPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L+++++ P++ + P++ L Q I++V+ A Sbjct: 174 ALLLDQSFISGIGNWIADEVLYQSRIHPLQIASN------LPRESCEALHQSIEEVVKYA 227 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +D + F + + + G+ G+ I I GR+T Y Q Sbjct: 228 V-----------EVDADMDRFPKEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|297204068|ref|ZP_06921465.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197714732|gb|EDY58766.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 287 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L + + + ++ + +A G++++ V R K+L Sbjct: 1 MPELPEVEALKDFLTENLVGHEMVRVLPVAISVLKTYDPPLTA-VEGREVVAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E +G ++ HL +G + P + + + Sbjct: 60 DLETDGGPHLVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGAGFDL----TEAG 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + P + LGP+P F+ + LK AL +Q ++AG+ Sbjct: 116 TQKRLAVYVVADPQEVPGIARLGPDPLAEDFDGERFAALLKAERRQLKGALRDQTLIAGV 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP + SL L + ++ L +A++ + Sbjct: 176 GNAYSDEILHAARMSPFKLAASLTPEET------ETLYRALRTTLTEAVERSRGVAAGRL 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TG+PC CG IR + + S YC CQ Sbjct: 230 KSEKKSG-----LRVHGRTGDPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|254383482|ref|ZP_04998833.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] gi|194342378|gb|EDX23344.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] Length = 286 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 112/288 (38%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + V + ++ + +A G+ +R K+L Sbjct: 1 MPELPEVEALREFLDEHLTGRVVERVHPLAVSVLKTYEPPLTA-LEGQPAGTTARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G L ++ HL +G + + +P + + + + Sbjct: 60 ALR-IGELHLVTHLARAGWLRWQDSFPEQPPRPGKGPLALRLVLEGGGGFDL----TEAG 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P + LGP+P ++F+ + +K L +Q ++AGI Sbjct: 115 TQKRLAVYVVRDPQEVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGVLRDQGVIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RAK+SP + S + T L +Q L +A+ + Sbjct: 175 GNAYSDEILHRAKVSPFKLAASFDEEQVTH------LYGAVQDTLREAVARSHGVAAGRL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + A V+G+ GEPC CG +R + A S YC CQ Sbjct: 229 KAEKKS-----AMRVHGREGEPC-PVCGDTVRSVSFADSSLQYCPTCQ 270 >gi|282862271|ref|ZP_06271333.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282562610|gb|EFB68150.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 275 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 108/288 (37%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQAAKRLDTALAGHVLT-----RSDLR--VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +E L++ HL M GS+ + + P H + T YR+ Sbjct: 54 LTRVEDGLTLHSHLRMDGSWRLYAPG-ERWRGGPAHQIRAVLETAERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++L+ T + Q + + L ALL+Q+ +AGI Sbjct: 107 --PVLELIRTRDEDQVVGHLG-PDLLGPDWDPDTAERNLRSAPGRPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + A+ +P L T K + E + ++ Sbjct: 164 GNVYKCELCFMARATPWLPVGELPPATMTRLVRTAKQLLEANRDNPSRTTTAPVAVSARP 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F+ VYG+ PCL C IRR+ R T++C CQ Sbjct: 224 DRMREARRFRERLFVYGRADRPCL-RCATPIRRVELDNRPTYWCPGCQ 270 >gi|290955721|ref|YP_003486903.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260645247|emb|CBG68333.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 289 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L+ + + + L+ P +A G++I DV R K+ Sbjct: 1 MPELPEVEALRDFLVGSLVGHEAVRVLPVAISVLKTYDPP--VSAFEGREITDVRRHGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L IE +G +V ++ P + + + + Sbjct: 59 LDIEADGGELHLVTHLARAGWLQWKDRLPDGPPRPGGRNPLALRVALETGEGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V Q P + LGP+P + F+ + +K AL +Q ++AG Sbjct: 119 QKRLAVYVVR--DPAQVPGIARLGPDPLADEFDVTRFAGLLAGERRQIKGALRDQSLIAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP R T SL + L + ++ L +A++ Sbjct: 177 IGNAYSDEILHAARMSPFRLTSSLKPEE------IRHLHEALRTTLTEAVERSRGLAAGR 230 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GEPC CG +R + + S YC CQ Sbjct: 231 LKAEKKSG-----LRVHGRAGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 273 >gi|269956005|ref|YP_003325794.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269304686|gb|ACZ30236.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 111/301 (36%), Gaps = 32/301 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + TV + F +A G + +R K+L Sbjct: 1 MPELPEVEGLVRFLDERSRGRTVAAADVGNIAALKTFDPPLTA-LVGATVRGWARHGKWL 59 Query: 61 LIELEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + ++VHL G ++ + + RV Sbjct: 60 DLRTFTFDDDADPHLLVHLSRGGWLRWYDQVPTTTVRP------RLGGSARGAVIALRVR 113 Query: 116 YNDPRRFGFMDLVETS--------LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 ++D F + P + TLGPEP D +F L KN + Sbjct: 114 FDDGTGFDLTEAGTQKRLAVHVVRDPRDVPQVATLGPEPLDPAFTVEALRALLGAKNQQV 173 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L +Q +AGIGN Y E L A+ SP + TRS ++ + +L I L Sbjct: 174 KGLLRDQGAIAGIGNAYSDEILHVARFSPFKLTRSFTPDD------VARLHAAIVDTLTG 227 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A+ A + G V+G+TG+ C CG +R + A RS YC C Sbjct: 228 AVAASSGKPAKELKDAKRAG-----MRVHGRTGQAC-PVCGDTVREVSFADRSLQYCATC 281 Query: 288 Q 288 Q Sbjct: 282 Q 282 >gi|325128407|gb|EGC51290.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 215 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQT-GVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGT-----VMRYRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 GNIY E+L+RA +SP R L + Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKECALW 204 >gi|261314782|ref|ZP_05953979.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] gi|261303808|gb|EEY07305.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] Length = 215 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 92/218 (42%), Positives = 120/218 (55%), Gaps = 12/218 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDGASA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 +Q+++AG+GNIYVCEALWR R+ + Sbjct: 180 DQRLIAGLGNIYVCEALWRQGF---RRCARQARLQAKW 214 >gi|291008458|ref|ZP_06566431.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 284 Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 110/288 (38%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + ++L +V + + ++ +S G+ + +R KYL Sbjct: 1 MPELPEVEALAQHLRDNATGRSVARVDIASLSVLKTVSPPWSE-LHGRTVTGATRYGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ HL +G + P K + V ++ Sbjct: 60 DLD-CEGLHLVFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGGG------VGFDLTE 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L ++ P S + LT + +K L +Q ++AGI Sbjct: 113 AGTQKKLSAWVVEDPAEVPGIAKLGPDALSLDVEGLTAVLSGRTERIKTVLTDQSMIAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSP L + + +L ++++L DA++ + Sbjct: 173 GNAYSDEILHAAKLSPYATAGRLDAD------AVERLHATMREILTDAVERSLKQDAARL 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TG PC CG +R + A RS YC CQ Sbjct: 227 KAEKRSG-----MRVHGRTGLPC-PVCGDKVREVSFADRSLQYCATCQ 268 >gi|255326609|ref|ZP_05367686.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296349|gb|EET75689.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 294 Score = 132 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 113/307 (36%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + V + + R+ +A G I K+L Sbjct: 1 MPEGHSIHRIARQISDVFTG---ERVQVSSPQGRY---AEGAALLDGHTITGAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + E +L++ VHLG+ G++ + I ++ K Sbjct: 55 FVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYAAGEGEPYAGPPEPK 114 Query: 112 YRVIYNDPRRFGF------MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 V G+ + + LGP+P + + K + Sbjct: 115 STVRCRIVSEHGWADLVGPTICRTLTPEEVRTVRSKLGPDPLNPDADPEQFYRAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R +SL L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKSLSDEE------LERLWEDNKHLL 228 Query: 226 IDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + + G + G + +A VY GEPC CG IR AGR + Sbjct: 229 VIGVRVGRIITTEPEDRPGIPETEAWPDHANYVYMHHGEPC-RRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|330944159|gb|EGH46278.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 213 Score = 132 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 18/217 (8%) Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSG+ + H HV I L + + Y DPRRFG M + Sbjct: 15 HLGMSGNLRLVEAGLPALK----HEHVDIELESG-----LALRYTDPRRFGAMLW--SLD 63 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + + L LGPEP + F+ L + K+ +K +++ +V G+GNIY EAL+ A Sbjct: 64 PHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAA 123 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P R+ S+ + KL EI+++L AI+ GG++LRD++ DG GYFQ Sbjct: 124 GIDPRREAGSVSRARYL------KLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQE 177 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 178 LFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 213 >gi|108801300|ref|YP_641497.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119870451|ref|YP_940403.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126437281|ref|YP_001072972.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|108771719|gb|ABG10441.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119696540|gb|ABL93613.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126237081|gb|ABO00482.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 287 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L + + + + ++ F +A G+++ D R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLPIGRVDVSAFSVLKTFDPPITA-LHGREVTDAHRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L +I HL +G A P+K + + + L + + Sbjct: 60 GLQA-GDLYLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV + L+ Q + + + +QK++AG Sbjct: 119 QKRLAVWLVSDPSAVPGIAALGPDALELTADELGVLLSKQSGRIKT----VITDQKVLAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP L + L + VL DA+ Sbjct: 175 IGNAYSDEILHVAQLSPFATANKLTPEQ------VATLHDAMLSVLTDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|87120854|ref|ZP_01076746.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] gi|86163692|gb|EAQ64965.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] Length = 216 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 11/220 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + ++N + D+ + + LR+ G+ +I +SRR KY+ Sbjct: 1 MPELPEVETTKRGIQPHLQNQQILDVEIRQAQLRWPITAELVEQVSGQDVISLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++I+HLGMSGS + H+HV L++ + Y DPR Sbjct: 61 GIHT-STGTVIIHLGMSGSLYLVAADTP----PLFHDHVDFKLSSGQ-----WLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + ++ LGPEP ++FNA YL + K +K +++ K + G+ Sbjct: 111 RFGAILWTK-EDWLNHSLIQHLGPEPLSDAFNAAYLAAKAKGKTQAIKTFIMDSKQLVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 GNIY EAL+ A + P R+ + T KL+ Sbjct: 170 GNIYANEALFMAGIKPNRRAGLVSAKRLTVLVDCIKLVLA 209 >gi|238893757|ref|YP_002918491.1| endonuclease VIII [Klebsiella pneumoniae NTUH-K2044] gi|238546073|dbj|BAH62424.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 263 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + ++ + + + L K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----VEPQSNRVLRVRLQ---TASKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 109 ----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + G Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYRTRG---- 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG++I + + R ++C CQ Sbjct: 215 -LVDDNKHHGAL-FRFKVFHRDGERC-ERCGRIIEKTTLSSRPFYWCPGCQ 262 >gi|282862765|ref|ZP_06271826.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] gi|282562451|gb|EFB67992.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] Length = 286 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A + + V R K+L Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARVLPVAISVLKTYDPPLTA-LQDTTVTAVDRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 I G L +++HL +G + A P + + + LT+ + Sbjct: 60 DI-TAGGLHLLIHLARAGWLRWQDGVPAAPTRPGKGPLALRTVLTDGEGFDLTEM--GTT 116 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +R + P + LGP+P +SF+ + +K AL +Q ++AG Sbjct: 117 KRLSVHLVR---DPADVPGVARLGPDPLADSFDRDAFALLLGGQRRQIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + T SL N+ L L ++ L DA++ Sbjct: 174 IGNAYSDEILHVARMSPFKLTTSLSDND------LTHLYTAMRATLKDAVERSRGVAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ G+ C CG I + + + YC CQ Sbjct: 228 LKAEKKSG-----MRVHGRAGQAC-PVCGDTILEVSFSDSALQYCPTCQ 270 >gi|227114756|ref|ZP_03828412.1| endonuclease VIII [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 263 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + G+++ + K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFA-----FPELKPYETELVGQQVRQIDTHGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + + L + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETKR----DLRVRLE---TQDRAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIV 177 ++++ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IEMLTPETLSTHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSRALLEIPRLSYNTRGTVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H +F V+ + GE C CG +I R + + R ++C++CQK Sbjct: 219 DRHHGA------IFSFKVFHREGERC-ERCGGIIERTMLSSRPFYWCSHCQK 263 >gi|254994376|ref|ZP_05276566.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-064] Length = 212 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 16/217 (7%) Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HL M G F + + + +H H+ ++T + + D R+FG M++ Sbjct: 12 HLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHT-----ELRFLDVRKFGTMEVTNKYG 62 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + + ++ LGPEP +F K + +K ALL+QK+VAG+GNIY E + A Sbjct: 63 EGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEA 122 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 K+ P R SL + ++ + + ++ +A+ GGS++R YV+ G +G +Q+ Sbjct: 123 KVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTYVNSQGKLGQYQDK 176 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 177 LKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 212 >gi|308186065|ref|YP_003930196.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] gi|308056575|gb|ADO08747.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] Length = 262 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 106/291 (36%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + +T+ L+ P G+++ + R K L Sbjct: 1 MPEGPEIRRVADKLEAAIVGQPLTEAWFAFPQLKTYEPS-----LIGEQVQAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVKPDTELNTTRQLRVRLA-------TAGKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ ++ N + + + LL+Q + Sbjct: 109 ----IELLNADTLAAHPFLTRIGPDVLNSQLNVEEVKERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P + + L + L + + V A G+ + Sbjct: 165 AGLGNYLRAEILWLAQLLPNHRAQDLSDDQ------LTAFSEALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + FQ F V+ + G+ C CG +I + + R ++C CQ Sbjct: 219 YHEEA-----AFQ--FEVFHRQGKKC-RRCGTVIEKGTLSSRPFYWCPGCQ 261 >gi|325003039|ref|ZP_08124151.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia sp. P1] Length = 292 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 108/293 (36%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L V + + + F +A G+ + SR K+L Sbjct: 1 MPELPEVEALAHHLREHAVYRPVARVDVASMSALKTFDPA-VSALVGRVVTGASRYGKFL 59 Query: 61 LIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ L ++ HL +G T+ A P K + + + + Sbjct: 60 SVDFADRPDDGELHLVTHLSRAGWLRWHATAGATPPKPGRGPLQLRVHLDAVGGPGFDLT 119 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++ + LV P + LGP+ + + + LK + +Q Sbjct: 120 EAGTQKRLAVYLV--DDPALVPGIAKLGPDALELTRPGLD--ELLDGDTRRLKTLVTDQS 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAGIGN Y E L A+LSP L L + + VL DA+ Sbjct: 176 TVAGIGNAYSDEILHTARLSPYATAGRLTTEQRD------ALFEAVHGVLADAVGRSVG- 228 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A RS YC CQ Sbjct: 229 ----QGAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFAERSFQYCPTCQ 276 >gi|291616721|ref|YP_003519463.1| Nei [Pantoea ananatis LMG 20103] gi|291151751|gb|ADD76335.1| Nei [Pantoea ananatis LMG 20103] Length = 263 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L M + + D+ L + GK++ + R K L Sbjct: 2 MPEGPEIRRVADQLEMAIVGQPLADVWFAFPAL-----KTYEPTLVGKRVESIETRGKAL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + + ++Y+ Sbjct: 57 LTHFSNGLTLYSHNQLYGVWRIVSPDVQPETKRQLRVRLA-------TADQAILLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ + + + + LL+Q + Sbjct: 110 ----IELLNAETLASHPFLNRIGPDVLSPALTPEEVKQRLLSARFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P +SL ++ L + V A G+ + Sbjct: 166 AGLGNYLRVEILWLAQLLPHHNAQSLSESQ------LDAFSDALLSVPRHAYRMRGTMKK 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 220 YHSEA-------AFRFEVFHRQGKTC-RRCGTVIVKGVLSSRPFYWCPGCQ 262 >gi|229495049|ref|ZP_04388795.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] gi|229317980|gb|EEN83855.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] Length = 288 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ HL +G A P K + + Sbjct: 60 ALD-CDGLWLVTHLSRAGWMRWLDNPSATPPKPGKGPLALRVHFFTPEGSTPAFDLTEAG 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + P + LGP+ + ++ +KN++++Q ++AGI Sbjct: 119 TKKRLAVWVVNDPQEVPGIARLGPDAMAVTEAE--FAQILGGTSARIKNSIVDQSLIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSP + L + + L ++ L DAI+ + Sbjct: 177 GNAYSDEILHTAKLSPFATSSRLTPDQ------ISTLYAVMRSTLADAIERS-----EGQ 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG ++R + A RS YC CQ Sbjct: 226 DAARLKGEKRSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYCATCQ 272 >gi|311113768|ref|YP_003984990.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] gi|310945262|gb|ADP41556.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] Length = 294 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 113/307 (36%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R L V + + R+ +A G I++ K+L Sbjct: 1 MPEGHSIHRIARQLNDVFTG---ESVRVSSPQGRYT---DGAALLDGASILNAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + L++ VHLG+ G++ + I ++ K Sbjct: 55 FVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYTAGEAEGYTGPPAPK 114 Query: 112 YRVIYNDPRRFGF------MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 G+ + LGP+P + N K + Sbjct: 115 GTTRCRIVSEHGWADLVGPTICRTLNPDEVAQVRAKLGPDPLNTDANPERFYAAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R ++L + L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKTLTDDE------LSRLWEDNRHLL 228 Query: 226 IDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + G + G + + ++A VY GEPC CG IR AGR + Sbjct: 229 TIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHHGEPC-PRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|297191673|ref|ZP_06909071.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] gi|197721607|gb|EDY65515.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] Length = 274 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 109/293 (37%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 8 MPEGDTVWLTAHRLHEALAGQVLT-----RSDLR--VPRFATADLTGRTVLDVTPRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HLGM GS+ + A+ P H I + YR+ + Sbjct: 61 LTRFEGGLTLHSHLGMEGSWRVFDAG-ARWSGGPSHQIRAILGSAARTAVGYRLPVVELL 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + + + + + L ALL+Q+ +AGI Sbjct: 120 R---------TAEEEEAVGHLGPDLLGPDWDPGRAVANLLADPLRPLGEALLDQRNLAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDY 239 GN+Y E + A+++P L +L++ ++ G + Sbjct: 171 GNVYKSELAFLARVTPWLPVGELPPGIPERLVATAQRLLEANKRSFDRRTMTSGRNPS-- 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G PC CG +R+ Q R T++C CQ Sbjct: 229 -----------QKLYVYGRKGRPC-PRCGTPVRKADQGEAGRERPTYWCPRCQ 269 >gi|300741669|ref|ZP_07071690.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380854|gb|EFJ77416.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 294 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 113/307 (36%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R L V + + R+ +A G I++ K+L Sbjct: 1 MPEGHSIHRIARQLNDVFTG---ESVRVSSPQGRYT---DGAALLDGASILNAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + L++ VHLG+ G++ + I ++ K Sbjct: 55 FVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYTAGEAEEYTGPPAPK 114 Query: 112 YRVIYNDPRRFGF------MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 G+ + LGP+P + N K + Sbjct: 115 GTTRCRIVSEHGWADLVGPTICRTLNPDEVTQIRAKLGPDPLNTDANPERFYTAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R ++L + L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKTLTDDE------LRRLWEDNKHLL 228 Query: 226 IDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + G + G + + ++A VY GEPC CG IR AGR + Sbjct: 229 TIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHHGEPC-PRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|152964129|ref|YP_001359913.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] gi|151358646|gb|ABS01649.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 19/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + N+ + +A G + V RR K+L Sbjct: 1 MPELPEVEALATFLRERLVGRVVARVEVGALNVLKTYDPP-PSALGGLLVAGVVRRGKWL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL-----TNNTNTKKYRVI 115 ++++G L + VHL +G A P++ N V + + + + Sbjct: 60 DVDVDG-LHLAVHLSRAGWVRWSDALPAAPLRPGGKNPVALRVRLAPEDDEDPHRPPGFD 118 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + + + Q P + TLGP+P D++F+ +K L +Q Sbjct: 119 LTEAGTQKRLAVHVVRDPAQVPGIATLGPDPLDDAFDEAAFASLLAGSRQQVKGLLRDQS 178 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN Y E L A+LSP P + +L ++ L+DA+ A Sbjct: 179 VLAGVGNAYSDEVLHVARLSPYAIAGK------LPAPDVERLYDALRTTLLDAVAAASGK 232 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+ G PC CG +R + A RS YC CQ Sbjct: 233 PAKELKDAKRAG-----LRVHGRAGLPC-PVCGDTVREVSFADRSMQYCATCQ 279 >gi|188534437|ref|YP_001908234.1| endonuclease VIII [Erwinia tasmaniensis Et1/99] gi|188029479|emb|CAO97356.1| Endonuclease VIII [Erwinia tasmaniensis Et1/99] Length = 264 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 109/292 (37%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD+ L + G+++I + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKGKVLTDVWFAFPAL-----QTYQQMLVGERVIAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGSEP---AKSKRVLRVRL---AAADKTLLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L +GP+ D + + + + LL+Q + Sbjct: 110 ----IQLLDAQGLATHPFLLRVGPDVLDMALTQQQVRERLLSTRFRRRQFGALLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L + A+ R Sbjct: 166 AGLGNYLRVEILWQAQLAAQHKAETLSDKQLDALAE-----------ALLAVPRLSYRTR 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +F+V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 215 GQADENRHHGAL-FSFNVFHRAGKAC-RRCGESIVKTMLSSRPFYWCPGCQK 264 >gi|320007052|gb|ADW01902.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 286 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 121/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + + G + V+R K+L Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARVLPLAISVLKTYDPPVTE-LEGADVSAVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 I G+L +++HL +G + A P + + + LT + + Sbjct: 60 DI-TAGDLHLLIHLARAGWLQWKDGFPATPPRPGKGPLALRTVLTGGDG---FDLTEMGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + LV + P + LGP+P +SF+ +K AL +Q ++AG Sbjct: 116 TKRLAVHLVR--DPAEVPGVARLGPDPLADSFDRDAFAAVLGGARRQIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP + T +L + + +L ++ L DA++ Sbjct: 174 IGNAYSDEILHVAKMSPFKLTSALGDED------VTRLYDAMRTTLQDAVERSRGVAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + V+G+TG+PC CG + + + S YC CQ Sbjct: 228 LKAEKKS-----SMRVHGRTGQPC-PVCGDTVLEVSFSDSSLQYCPTCQ 270 >gi|120405833|ref|YP_955662.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119958651|gb|ABM15656.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 297 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 111/295 (37%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F SA G+++ +R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVAALSVLKTFDPPISA-LYGQEVTGANRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ L +I HL +G A P+K + + + L + V Sbjct: 60 GLQAGE-LHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGPPGESPGPNVAAGAA 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA------IYLTHQFHKKNSNLKNALLN 173 F + + + + L ++ +K + + Sbjct: 119 PGFDLTEAGTQKRLAVWLVTDPMAVPQIASLGPDALSLTGQALAEVLGGQSGRIKTVITD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QK++AGIGN Y E L AKLSP L + L L + VL DA+ Sbjct: 179 QKVIAGIGNAYSDEILHVAKLSPFATANKLTPSQ------LVTLHDAMISVLTDAV---- 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 229 -TRSVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 281 >gi|327393146|dbj|BAK10568.1| endonuclease VIII Nei [Pantoea ananatis AJ13355] Length = 262 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 105/291 (36%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L M + + D+ L + G+K+ + R K L Sbjct: 1 MPEGPEIRRVADQLEMAIVGQPLADVWFAFPAL-----KTYEPTLVGEKVESIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + + ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVSPDVQPETKRQLRVRLA-------TADQAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ ++ + + + LL+Q + Sbjct: 109 ----IELLNAETLASHPFLNRIGPDVLSHALTPEEVKQRLLSARFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P +SL ++ L + V A G+ + Sbjct: 165 AGLGNYLRVEILWLAQLLPHHNAQSLSESQ------LDAFSDALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 219 YHSEA-------AFRFEVFHRQGKTC-RRCGTVIEKGVLSSRPFYWCPGCQ 261 >gi|254479820|ref|ZP_05093068.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214039382|gb|EEB80041.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 273 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 110/294 (37%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I + V+ TV I LR HFS +G ++IDV R K L Sbjct: 1 MPEGPEIRIAADTIANVLVGNTVETIRFGLPRLR-----HFSKQLKGHRVIDVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + SI H + G + + C+ + + I L T++ Sbjct: 56 LTHFDHGYSIYSHNQLYGVWKV----CSGHKLPKSNRSMRILLQTETHSAVL-------Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + + T ++P LR LGP+ + + + + + L L+Q + Sbjct: 105 SASDISVWPTEELAEHPFLRKLGPDIMNPALEWREIAARLQDPRFERRELAALYLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GN E A L P +K L + L KL + ++ + D G ++ Sbjct: 165 AGNGNYLRSEVTHHAGLHPKQKPCELTRAQ------LGKLARSTLEISRRSYDTRGITIT 218 Query: 238 DYVH---IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F V+G+ PC S C I+ R ++C CQ Sbjct: 219 PRLSKTLEKRGVARGSRRFYVFGRDDLPCYS-CSTPIKYSEINSRRLYHCPQCQ 271 >gi|94967411|ref|YP_589459.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Candidatus Koribacter versatilis Ellin345] gi|94549461|gb|ABF39385.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 275 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 104/293 (35%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L A G+ ++DV R K++ Sbjct: 1 MPEGDTIFRAARTLQRALAGKVVTRFETVLPKLARVDED---APLAGRTVVDVEARGKWM 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+L ++ H+ MSGS+ I V + V + P Sbjct: 58 LMHFSGDLILLTHMLMSGSWHIYRPGEQWQRSRNDMRVVI------ETSDILAVAFRVPV 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E SLK + + + + L + LL+Q ++AG Sbjct: 112 ---AEFHTEESLKRRARLNQLGDDLLGAEFDIPASVERLRAHGDLELGDTLLHQSVLAGP 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + +L P RK SL + +L + + + + D G + Y Sbjct: 169 GNVFKSEICFACRLDPFRKISSLSEEE-----LLRVATKARELMTSNVSDTSGDKIVTYT 223 Query: 241 HIDGSIGYFQ--NAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + G VYG+ G PC CG I Q R T++C CQ+ Sbjct: 224 GFRRTTGRSDPYERLWVYGRAGLPC-RRCGTRIEVKRQGAQARKTYFCPECQR 275 >gi|213029143|ref|ZP_03343590.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 220 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 19/239 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDF 220 >gi|54026994|ref|YP_121236.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54018502|dbj|BAD59872.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 289 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 111/293 (37%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L V + + FD P A G+ + +R K Sbjct: 1 MPELPEVEALAQFLREHAVGAVVGRVDVAALSAVKTFDPP---VTALSGRDVSGAARWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---LTNNTNTKKYRVI 115 +L ++ L +I HL G P K + + + T T + + Sbjct: 58 FLGMD-CSGLWLITHLSRGGWLRWIDEPNPNPPKPGGKSPLALRVHFFTPEGATPAFDLT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++ + +V+ H + LK AL++Q Sbjct: 117 EAGTKKRLAVYVVDDPKLVPGIARLGPDALEVSE----PQFAELLHGTSQRLKTALVDQA 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AGIGN Y E L AK+SP T++ P + + +L ++ VL DA+ Sbjct: 173 LLAGIGNAYSDEILHTAKISPFANTKT------LPAEKIAELYAAMRAVLTDAVQRSVG- 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG+PC CG +R + A RS YC CQ Sbjct: 226 ----QDAARLKGEKRSGMRVHARTGQPC-PVCGDTVREVSYAERSFQYCPTCQ 273 >gi|253576739|ref|ZP_04854066.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843949|gb|EES71970.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] Length = 272 Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 117/288 (40%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F+ G+++I + RR K L Sbjct: 1 MPELPEMENYRIQLSQHILDLPITGVNVGREKSVNLPAADFARELMGRQVIFIERRGKNL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ +++HL + +K + + V I+ + Sbjct: 61 LFHLDNGRRLLLHLML----GGLLYLGSKEDRPERSTQVEITFGEKLVLYFIGLRLGHLH 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 K L LGPE D N T K+ +LK L+NQ ++ GI Sbjct: 117 LHSA--------KEAEELLSHLGPELLDRRMNEERFTALLRKRRGSLKTTLVNQDVIPGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A+L P+ K ++ + + +L Q ++ VLI+A +AGG Sbjct: 169 GNCYADEIAFAAELLPMAKLQNFSDEDFS------RLYQAVRDVLIEATEAGGYMEMPLT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G VY + GE C CG I + GR FY CQ Sbjct: 223 RDDQLTGGANEICRVYDREGETC-PRCGDTIVKAEMNGRKVFYSPGCQ 269 >gi|169628133|ref|YP_001701782.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC 19977] gi|169240100|emb|CAM61128.1| Putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus] Length = 287 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L T+ I + ++ F +A G+ + +R KYL Sbjct: 1 MPELPEVEALADHLRRHATGATIGRIDISALSVLKTFDPPITA-LHGQPVTGATRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L ++ HL +G A P+K + + + L + + + Sbjct: 60 GLQA-GDLYLVTHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGDAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V + P S A L + LKN + +Q++++G Sbjct: 119 QKRLAVWVVRDPAAV----PQIASLGPDALSLTADGLADILAGTTARLKNVITDQRVISG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSP ++L + L L + +Q VL DA++ Sbjct: 175 IGNAYSDEILHVAKLSPFASGKTLSEGQ------LTALYEAMQSVLTDAVERSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG ++R + A +S YC CQ Sbjct: 224 QQAATLKGEKRSGLRVHARAGMPC-PVCGDVVREVSFADKSFQYCPTCQ 271 >gi|296169701|ref|ZP_06851319.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895698|gb|EFG75394.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 105/289 (36%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F A G+ + R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVGALSVLKTFDPPLGA-LHGRPVTGAHRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ L +I HL +G A P++ + + + L + + Sbjct: 60 GLQAGE-LFLITHLSRAGWLRWSDKLGAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV A L +K + +QK++AG Sbjct: 119 QKRLAVWLVTDPQTVPGIAALGPDALELGVDDLAGLLA----GNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLTDEQ------LTTLHDAMVSVLRDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|51247248|pdb|1Q3B|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The R252a Mutant At 2.05 Resolution. gi|168988638|pdb|2OPF|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (R252a) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 106/290 (36%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE PE+ NL +K +TD+ L + + G+ + V R K LL Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + K ++Y+ Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L L L + ++ + G Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ---- 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + ++C CQ Sbjct: 215 -VDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSAPFYWCPGCQ 261 >gi|327188618|gb|EGE55828.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CNPAF512] Length = 166 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 1/166 (0%) Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 MD+V + +P R LGPEP N A YL +F K LK+ALL+QK VAG+GNIY Sbjct: 1 MDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALLDQKNVAGLGNIY 60 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 VCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AGGSSLRD++ DG Sbjct: 61 VCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAGGSSLRDHIQTDG 120 Query: 245 SIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 121 SLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 166 >gi|168988643|pdb|2OQ4|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate gi|168988644|pdb|2OQ4|B Chain B, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 105/288 (36%), Gaps = 32/288 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 PE+ NL +K +TD+ L + + G+ + V R K LL Sbjct: 3 GPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKALLTH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +L++ H + G + + T + K ++Y+ Sbjct: 58 FSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD--- 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVAGI 180 ++++ +P L+ +GP+ D + + + +N LL+Q +AG+ Sbjct: 108 -IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGL 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E LW+ L+ K + L L L + ++ + G V Sbjct: 167 GNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ-----V 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 DENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|51247249|pdb|1Q3C|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The E2a Mutant At 2.3 Resolution Length = 262 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 105/288 (36%), Gaps = 32/288 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 PE+ NL +K +TD+ L + + G+ + V R K LL Sbjct: 3 GPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKALLTH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +L++ H + G + + T + K ++Y+ Sbjct: 58 FSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD--- 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVAGI 180 ++++ +P L+ +GP+ D + + + +N LL+Q +AG+ Sbjct: 108 -IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGL 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E LW+ L+ K + L L L + ++ + G V Sbjct: 167 GNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ-----V 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 216 DENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|213418642|ref|ZP_03351708.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 250 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 83/245 (33%), Positives = 124/245 (50%), Gaps = 19/245 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL + II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKI-----LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTTLKDFC 221 Query: 241 HIDGS 245 GS Sbjct: 222 KAMGS 226 >gi|283457913|ref|YP_003362514.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133929|dbj|BAI64694.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 294 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 112/306 (36%), Gaps = 31/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + V + + R+ +A G I K+L Sbjct: 1 MPEGHSIHRIARQISDVFTG---ERVQVSSPQGRYT---EGAALLDGHTITGAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + E +L++ VHLG+ G++ + I ++ K Sbjct: 55 FVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYAAGEEQPYAGPPEPK 114 Query: 112 YRVIYNDPRRFGF------MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 V G+ + + LGP+P + + K + Sbjct: 115 STVRCRIVSEHGWADLVGPTICRTLTPEEVRTVRSKLGPDPLNPDADPEQFYRAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R +SL L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKSLSDEE------LERLWEDNKHLL 228 Query: 226 IDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + + G + G + +A VY GEPC CG IR AGR + Sbjct: 229 VIGVRVGRIITTEPEDRPGVPETEAWPDHANYVYMHHGEPC-RRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQ 288 +C CQ Sbjct: 288 WCPGCQ 293 >gi|304395701|ref|ZP_07377584.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] gi|304356995|gb|EFM21359.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] Length = 262 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + +T+ L+ P G+++ + R K L Sbjct: 1 MPEGPEIRRVADKLEAAIVGEPLTEAWFAFPQLKTYEPS-----LIGEQVQAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVKPDTELNTTRQLRVRLA-------TKGKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ +++ + + + LL+Q + Sbjct: 109 ----IELLNADTLAAHPFLTRIGPDVLNSALTVEEVRERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P + + L + L + + V A G+ + Sbjct: 165 AGLGNYLRAEILWLAQLLPNHRAQDLSDDQ------LTAFSEALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + FQ F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 219 YHEEA-----AFQ--FEVFHRQGKQC-RRCGTVIEKGTLSSRPFYWCPGCQR 262 >gi|301166437|emb|CBW26013.1| formamidopyrimidine-DNA glycosylase [Bacteriovorax marinus SJ] Length = 270 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 121/290 (41%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ L +M + + + + H G+KII V R+ K L Sbjct: 1 MPELPEVETIKNQLNEIM---PIKVLECTQSKVISGIAHTPIE-LSGRKIIAVHRKGKLL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 EL+ N ++ HLGM+G + I P ++ K + Y DPR Sbjct: 57 YFELDKNEFLLSHLGMTGGWRIGKEKPTDPNGVKHNHLCIKH-------KGGYLSYVDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M ++ L+ Q T N +K LL+QK+ AG Sbjct: 110 RFGHMYQLD-KLQTQEKLDELGVDLKDKAYTPEYLSTTIKKYPNRQIKVHLLDQKLYAGT 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GN V E RA + P R+ +SL ++ + K+ + V+ A GG++ + Y Sbjct: 169 GNYIVNEICARAGVRPTRRNKSLTKDE------IIKMHKATAVVIDGATQTGGTTFQGGY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G V+ + + C ++++ A R T+YC CQK Sbjct: 223 ADTTGSKGNGVGHLVVFYQ--KICQLCHETPVKKLYLAQRGTYYCPKCQK 270 >gi|333010176|gb|EGK29611.1| endonuclease VIII [Shigella flexneri K-272] gi|333021133|gb|EGK40390.1| endonuclease VIII [Shigella flexneri K-227] Length = 263 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFPNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + ++ + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSY-----ATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSCPFYWCPGCQ 262 >gi|147921120|ref|YP_685069.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] gi|56295548|emb|CAH04791.1| formamidopyrimidine-DNA glycosylase [uncultured archaeon] gi|110620465|emb|CAJ35743.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] Length = 269 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + ++ T+ DI + ++ F GK+I + R K++ Sbjct: 1 MPELPEIYNLAMQMNKELQGKTIADIEIVQEKCLNVNSAEFRDLLTGKRIGETRSRGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +++++LGM G + K T+ + + Sbjct: 61 FTAAGEDRTLLLNLGMGGDVLYHRPGSEPEGKYKLKFT-------YTDASALSINFW--- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG++ +V+ + + LG P + F K +LK LL+QKI+AGI Sbjct: 111 WFGYVHIVKNNELKSHKMTSALGISPIEPEFTFDCFKKLLSGKRCSLKTLLLDQKIIAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y + L+ A+L P RK R L + + +L + I L +A GG L+ Sbjct: 171 GNVYAQDILFTARLHPDRKVRQLSDDE------IERLFKSIIGNLHNAAAHGG--LKFEK 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++F V K G+PC C I +I +++ C CQ Sbjct: 223 DLYGHNGSI-DSFLVGYKEGQPC-PVCNTTIEKIKTGSTASYICPKCQ 268 >gi|254819353|ref|ZP_05224354.1| hypothetical protein MintA_05478 [Mycobacterium intracellulare ATCC 13950] Length = 287 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L +TV + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPISA-LHGQTVVGADRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + +L ++ HL +G A P++ + + + L + + Sbjct: 60 GLRT-DDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV + + P L +K + +QK++AG Sbjct: 119 QKRVAVWLVSDPQQ----IPQIASLGPDALDLGPDDLARVLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L + L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSEKQ------LAALHDAMITVLTDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|120601184|ref|YP_965584.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] gi|120561413|gb|ABM27157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] Length = 371 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 18/218 (8%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 HL M+G I + H V L T R+ ++D R+FG++ + Sbjct: 172 FHLKMTGRLFIHPPATP----AGIHTRVVFDLEGGT-----RLFFDDARKFGYVRCITRR 222 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P R P +A + ++ +K LL+QK+VAG+GNIY E+L+R Sbjct: 223 SLALWPFWR--DLGPEPLETDARGFAARLARRRGRIKALLLDQKVVAGVGNIYADESLFR 280 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P + +LI L+ L +Q VL ++I GSS+RDY G G FQN Sbjct: 281 AGIRPDTQAHTLIPER------LFALHGHLQDVLRESIAECGSSIRDYRDAHGDAGAFQN 334 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 335 SFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPRCQR 371 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----NLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE I L + + + +H LR P F+ A +G++I DV R Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLRT--PAAFTEAVQGRRIADVGR 58 Query: 56 RAKYL 60 R K L Sbjct: 59 RGKLL 63 >gi|46581658|ref|YP_012466.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|81698981|sp|Q726D5|FPG_DESVH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46451081|gb|AAS97726.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|311235298|gb|ADP88152.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris RCH1] Length = 365 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 18/218 (8%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 HL M+G I + H V L T R+ ++D R+FG++ + Sbjct: 166 FHLKMTGRLFIHPPATP----AGIHTRVVFDLEGGT-----RLFFDDARKFGYVRCITRR 216 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P R P A + ++ +K LL+QK+VAG+GNIY E+L+R Sbjct: 217 SLALWPFWR--DLGPEPLETEARGFAARLARRRGRIKALLLDQKVVAGVGNIYADESLFR 274 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P + +L L+ L +Q VL ++I GSS+RDY G G FQN Sbjct: 275 AGIRPDTQAHTLTPER------LFALHGHLQDVLRESIAECGSSIRDYRDAHGDAGAFQN 328 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 329 SFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPQCQR 365 Score = 76.2 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE I L + + + +H L P F+ A +G++I DV RR Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLCTPAAFTEAVQGQRIADVGRRG 60 Query: 58 KYL 60 K L Sbjct: 61 KLL 63 >gi|118464184|ref|YP_880320.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254773947|ref|ZP_05215463.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|118165471|gb|ABK66368.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 287 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISA-LHGQTVVGAERWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + L +I HL +G A P++ + + + L + + + Sbjct: 60 GLRT-EGLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGSPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ P + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDPA----RVPGIAALGPDALDLDVDALADLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVLTDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|18404050|ref|NP_564608.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana] gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 390 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 115/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + N P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K ++ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ + P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLL--ANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ SL + L I++V+ A+ Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSLSKEQ------CEALHTSIKEVIEKAV----- 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + + +P + G+ I I GR+T Y QK Sbjct: 228 ------EVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277 >gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] Length = 390 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 115/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + N P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K ++ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ + P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLL--ANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ SL + L I++V+ A+ Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSLSKEQ------CEALHTSIKEVIEKAV----- 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + + +P + G+ I I GR+T Y QK Sbjct: 228 ------EVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277 >gi|41406987|ref|NP_959823.1| hypothetical protein MAP0889 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395338|gb|AAS03206.1| hypothetical protein MAP_0889 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 287 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 107/289 (37%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISA-LHGQTVVGAERWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + L +I HL +G A P++ + + + L + + Sbjct: 60 GLRT-EGLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGTPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ P + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDPA----RVPGIAALGPDALDLDVDALADLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVLTDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|307328100|ref|ZP_07607280.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306886219|gb|EFN17225.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 288 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 108/289 (37%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L + + + L+ P + G I +R K+ Sbjct: 1 MPELPEVEALTAILAERAAGREIARVLPVAVSVLKTYDPP--LSVLEGHTITAAARHGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + ++VHL +G P + + L + + Sbjct: 59 LDL-ATDGPHLVVHLAKAGWLRWRDGLPEAPPRPGKGPLALRLLLAGPERSGFDLTEAGT 117 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + +V + P + LGP+P ++SF +K L +Q ++AG Sbjct: 118 RKGLAVYVVRDPQE--VPGIARLGPDPLEDSFTLEAFAGLLRGVRHRIKGVLRDQSVIAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP R L + + + + + L A++ Sbjct: 176 IGNAYSDEILHAARMSPYRLASDLTEEE------IAGVYEAMGATLRSAVERSHGLAATD 229 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + V+G+TG+PC CG +R + S YC CQ Sbjct: 230 L-----KGEKRGGMRVHGRTGQPC-PVCGDTVREVSFRDSSLQYCPTCQ 272 >gi|320533366|ref|ZP_08034058.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134436|gb|EFW26692.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] Length = 346 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 126/341 (36%), Gaps = 66/341 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + RR Sbjct: 1 MPELPEVEVVRTGLTKHVAGRTVTRVEVLDPRPLRRQDGGAQAFIDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSC------------------------------ 87 K+L + L+ ++ HLGMSG ++ T+ Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTSVTTPGADPESNRATAFLADPDTLPGGRPVD 120 Query: 88 ----------AKPIKNPQHNHVTISLTNNTNT--------------KKYRVIYNDPRRFG 123 + +H V + L+ + + D G Sbjct: 121 LSATEQPRYVRDISTSARHLRVRLHLSGDAGGAVLDLVDQRMLGGLHVVDLTPTDDGAPG 180 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 M L + +PA + + + +K LL+Q +V+GIGNI Sbjct: 181 GMGDPRPLLPTDATHIARDLLDPALDLTGPTGVVVRVRASRRAIKTQLLDQGLVSGIGNI 240 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHI 242 Y E LW A + +R L ++ ++++ +V+ A++ GG+S YV + Sbjct: 241 YADEGLWEAGVHGLRPGTGLCPR------VVARILESTAEVMRRALEVGGTSFDALYVDV 294 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS-TF 282 +G+ G+F YG+ G C CG + R GRS T+ Sbjct: 295 EGAAGFFARELGAYGRQGLGC-RRCGATMAREALGGRSHTY 334 >gi|288936498|ref|YP_003440557.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] gi|288891207|gb|ADC59525.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] Length = 263 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD L + + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGQPLTDAWFAFPQL-----QPYQSLLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + + + + + L +K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----EQPASNRVLRVRLQ---TARKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L +GP+ D + + + ++ LL+Q + Sbjct: 109 ----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + + AI R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQLDA-----------LAHALLAIPRLSYHTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQADDNKHHGAL-FRFKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|300214317|gb|ADJ78733.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus salivarius CECT 5713] Length = 207 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 111/219 (50%), Gaps = 16/219 (7%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +I HL M G + +E + +H HV T+ T+ + YND R+FG M LV+ Sbjct: 1 MISHLRMEGKYFVE----PSTKEVEKHTHVVFDFTDGTS-----LRYNDVRKFGRMQLVK 51 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+GNIY E L Sbjct: 52 TGVEMQTAGLAKLGPEPKEETFIVEDFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVL 111 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 W +K+ P L + + L I K L A +AGG+++R Y G F Sbjct: 112 WMSKIHPETPANKLTEEE------VKVLRDNIIKELALATEAGGTTIRSYTDAFRHSGGF 165 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 166 QFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 203 >gi|309810552|ref|ZP_07704370.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] gi|308435549|gb|EFP59363.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] Length = 287 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 113/290 (38%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L + + + L + F A G + VSR K++ Sbjct: 1 MPELPEVSGLVGFLDERIVGRAIVGVELASIAVLKTFDPS-PQALAGLVVDAVSRHGKWI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 +E G LS++ HL +G ++ + + + + + + + Sbjct: 60 ALETSGGLSLVFHLSRAGWLRWSDALPTTVLRPGKSPIALRVRFDDGSG---FDLTEAGT 116 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V P + LG +P F + +K L +Q +AG Sbjct: 117 QKRLAVHIVR--DVVDVPGIAKLGIDPLSPEFTREAFGQLVASRRMQIKGLLRDQNEIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG-GSSLRD 238 +GN Y E L AKLSP T SL + L + L +A+DA G +D Sbjct: 175 VGNAYSDEVLHVAKLSPFALTSSLEPGQ------IDTLYDALITTLTNAVDAAAGKPAKD 228 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+TGE C CG +IR + A RS YC CQ Sbjct: 229 LKDAK------RAGMRVHGRTGEAC-PVCGDVIREVSFADRSLQYCATCQ 271 >gi|183984529|ref|YP_001852820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177855|gb|ACC42965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 287 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 108/289 (37%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L T+ + + ++ F A G+ + R KYL Sbjct: 1 MPELPEIEALVDHLRRHAVGTTIGRVDVAALSVLKTFDPPI-NALHGQTVTGAGRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G L +I HL +G A P++ + + + L + + Sbjct: 60 GVQA-GPLWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGVAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LVE + A L +K + +QK++AG Sbjct: 119 QKRLAVWLVEDPRQVPGIATLGPDALELGPEELAGVL----GPHTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L + L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVLTDAVSRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCATCQ 271 >gi|31789403|gb|AAP58519.1| putative formamidopyrimidine-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 102/288 (35%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+VE+ L + + + L L A + + + R K + Sbjct: 1 MPELPDVELYLDALRRRIVGQPLESVRLASPFLVRSIDPPLDRA-VNRVVRGLRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL+G+L I++HL ++G F + P K N T ++ Sbjct: 60 VWELDGDLFIVIHLMIAGRFRWKERGAGIPGKIG---LAAFDFPNGT-----LLLTEAGS 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + V + + + + + L + +++GI Sbjct: 112 KRQASLHVAAGERALASHDPGGIEPLDASLEQFAQVLRRENHTIKRS---LTDPHLLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP++ T + + +L L D Sbjct: 169 GNAYSDEILHAARMSPMKLTSQMGDAE------IERLYAATIDTLSSWRQRLLVETGD-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F++ +V+G+ G+PC C ++RI A YC CQ Sbjct: 221 NFPEKVTAFRDGMAVHGRYGKPC-PVCEDPVQRIRYAANEANYCPTCQ 267 >gi|294497645|ref|YP_003561345.1| endonuclease VIII [Bacillus megaterium QM B1551] gi|294347582|gb|ADE67911.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium QM B1551] Length = 272 Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + ++ V +I F H+ G +I V + K + Sbjct: 1 MPEGPEIRRAADEVEKAIISLPVREIWFA-----FPSLQHYEEVLTGARIKRVDTKGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +I H + G + + + + N KK ++Y+ Sbjct: 56 LIRFDNGYTIYSHNQLYGKWYVRSSYNYPSTNRQLRLAIH-------NEKKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 ++++ +P + +GP+ A L +F+ + LL+Q + Sbjct: 109 ----IEVLRDEEVSAHPFVSRVGPDTLSEEVTADELLDRFYSKPFYRRKWASLLLDQSFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A ++P + + L K + ++ + + GG + Sbjct: 165 AGIGNYLRSEILFVAGINPAARPVDCTEEQ------LKKAAEATISLVKQSYETGGITND 218 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G Q V+ + GE C G I ++ A R +YC CQK Sbjct: 219 VKLAETLKKKGQKRSQYRHWVFNREGEAC-RIDGTPILKVQAASRRLYYCPTCQK 272 >gi|302531490|ref|ZP_07283832.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302440385|gb|EFL12201.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L TV + + ++ ++ G++I +R K+L Sbjct: 1 MPELPEVEALAHHLREHAVGSTVFRLDVASLSVLKTAMPPYTE-LHGREITGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+L ++VHL +G P+K + + + + + + Sbjct: 60 DV-VLGDLHLVVHLARAGWLRWSDALSPAPLKPGKGPISLRVHLESASGPGFDLTEAGTK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V + +A L F K + LK AL +Q ++AGI Sbjct: 119 KGLAVWIVADPAEVASVARLGPDALA----VDASQLRELFQGKGTRLKWALTDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + RAKLSP L + L L + I++V DA+ Sbjct: 175 GNAYSDEIMHRAKLSPYATVGKLDEG------ALEVLAEAIREVETDAVSRSVG-----Q 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR I A +S YC CQ Sbjct: 224 KAARLKGEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCATCQ 270 >gi|296129351|ref|YP_003636601.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] gi|296021166|gb|ADG74402.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] Length = 296 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 30/299 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L VT + + F P A RG +++ SR K Sbjct: 1 MPELPEVEALAQFLGERAVGRAVTRVEVAAISALKTFRPPPT---ALRGGTVLEASRHGK 57 Query: 59 YLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYR 113 +L + + +G L ++ HL +G +P + + + + + + Sbjct: 58 WLDLSVGSLADGTLHVVWHLSRAGWVRWYDALPERPARPGKSPLALRVGFDDGSGFD--- 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + + + P + TLG EP ++F L +N +K L + Sbjct: 115 --LTEAGTRKRLAVHVVADPADVPQIATLGVEPLSDAFTPERLGELLAARNQQVKGLLRD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AGIGN Y E L A+ SP TRS + +L I++VL +A+ Sbjct: 173 QGTIAGIGNAYSDEILLVARTSPFAPTRSYDEART------RRLHTAIREVLTEAV---- 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIRRIVQAGRSTFYCTYCQ 288 + + V+G+TGEPC + CG + + A S YC CQ Sbjct: 223 -TTAAGRPAAELKDAKRRGMRVHGRTGEPCPGWDGTPCGDTVHEVSFADSSLQYCPTCQ 280 >gi|115475806|ref|NP_001061499.1| Os08g0304900 [Oryza sativa Japonica Group] gi|50508157|dbj|BAD30940.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|50508168|dbj|BAD30974.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|113623468|dbj|BAF23413.1| Os08g0304900 [Oryza sativa Japonica Group] gi|215693253|dbj|BAG88635.1| unnamed protein product [Oryza sativa Japonica Group] Length = 409 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 112/295 (37%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRV 114 L + L+ GM+G+ I+ +K + + + S Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + + PP+ LGP+ + +K + +K LL+Q Sbjct: 121 SFTDKRRFAKIRFL--DNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ K+ L Q I +V+ +++ G + Sbjct: 179 SFISGIGNWIADEVLYQARIHPMQTAS------MISKEKCKALHQCIIEVIEKSLEVGCN 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + + + + + +P G+ I I GR++ Y QK Sbjct: 233 SSQ-----------YPENWIFHSREKKP-----GKKIDFITVGGRTSAYVPELQK 271 >gi|159040486|ref|YP_001539739.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] gi|157919321|gb|ABW00749.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] Length = 286 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 112/290 (38%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + + + +AA G+++ D R K+L Sbjct: 1 MPELPEVEALADYLRRRAVGRRVDRLEIAAISALKTYDPAITAA-AGRQVTDARRLGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV--TISLTNNTNTKKYRVIYND 118 + L+ +L +++HL +G ++ P V + L + + + Sbjct: 60 DLVLDADLHLVIHLARAGWLQFREEFPSRGPLRPGKGPVALRVRLDDGSGFD-----LTE 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + + P + LGP+ + + + +K L +Q ++A Sbjct: 115 AGTQKSLAIYLVTDPAVVPGVARLGPDALAV--DPATFAERLRGRRGQVKGVLTDQTVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L A+LSP T L + L L + VL +A+ Sbjct: 173 GVGNAYSDEILHTARLSPFALTSRLTDDQ------LAALHTATRDVLGEAVSRSVG---- 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 223 -QRAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQYCPACQ 270 >gi|258644410|dbj|BAI39671.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Indica Group] Length = 409 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 112/295 (37%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRV 114 L + L+ GM+G+ I+ +K + + + S Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + + PP+ LGP+ + +K + +K LL+Q Sbjct: 121 SFTDKRRFAKIRFL--DNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 V+GIGN E L++A++ P++ K+ L Q I +V+ +++ G + Sbjct: 179 SFVSGIGNWIADEVLYQARIHPMQTAS------MISKEKCKALHQCIIEVIEKSLEVGCN 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + + + + + +P G+ I I GR++ Y QK Sbjct: 233 SSQ-----------YPENWIFHSREKKP-----GKKIDFITVGGRTSAYVPELQK 271 >gi|226307944|ref|YP_002767904.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226187061|dbj|BAH35165.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 288 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ HL +G P K + + Sbjct: 60 ALD-CDGLWLVTHLSRAGWMRWLDNPSPTPPKPGKGPLALRVHFFTPEGLTPAFDLTEAG 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + P + LGP+ + ++ +KN++++Q ++AGI Sbjct: 119 TKKRLAVWVVNDPQEVPGIARLGPDAMAVTEAE--FAEILGGTSARIKNSIVDQSLIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP + L + L ++ L DAI+ + Sbjct: 177 GNAYSDEILHTARLSPFATSSRLTPEQ------ISTLYAVMRSTLADAIERS-----EGQ 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG ++R + A RS YC CQ Sbjct: 226 DAARLKGEKRSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYCATCQ 272 >gi|295703014|ref|YP_003596089.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] gi|294800673|gb|ADF37739.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] Length = 272 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + ++ V++I F H+ G +I V + K + Sbjct: 1 MPEGPEIRRAADEVEKAIISLPVSEIWFA-----FPSLQHYEEVLTGARIKRVDTKGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +I H + G + + + + N KK ++Y+ Sbjct: 56 LIRFDNGYTIYSHNQLYGKWYVRSSYNYPSTNRQLRLAIH-------NEKKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 ++++ +P + +GP+ A L +F+ + LL+Q + Sbjct: 109 ----IEVLRDEEVSAHPFVSRVGPDILSEEVTADELLDRFYSKPFYRRKWASLLLDQSFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A ++P + + L K + ++ + + GG + Sbjct: 165 AGIGNYLRSEILFVAGINPASRPVDCTEEQ------LKKAAEATISLVKQSYETGGITND 218 Query: 238 -DYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G ++ V+ + GE C G I ++ A R +YC CQK Sbjct: 219 VKLAETLKKKGQKRSEYRHWVFNREGEAC-RIDGTPILKVQAASRRLYYCPTCQK 272 >gi|206575846|ref|YP_002239656.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|290510447|ref|ZP_06549817.1| endonuclease VIII [Klebsiella sp. 1_1_55] gi|226741117|sp|B5XZD9|END8_KLEP3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|206564904|gb|ACI06680.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|289777163|gb|EFD85161.1| endonuclease VIII [Klebsiella sp. 1_1_55] Length = 263 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD L + + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTDAWFAFPQL-----QPYQSLLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + + + + + L +K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAG----EQPASNRVLRVRLQ---TARKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L +GP+ D + + + ++ LL+Q + Sbjct: 109 ----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + + AI R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQLDA-----------LAHALLAIPRLSYHTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQADDNKHHGAL-FRFKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|151337011|gb|ABS00947.1| MutM [Thermus aquaticus] Length = 200 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 112/222 (50%), Gaps = 24/222 (10%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++VHLGM+G F +E T H L + + ++DPRRFG + +VE Sbjct: 1 MVVHLGMTGGFRLEKTP---------HTRAEFLLEDG------VLHFHDPRRFGRIWVVE 45 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L LGPEP F + LK LL+Q + AG+GNIY EAL Sbjct: 46 RGAYGEIPLLARLGPEPLSPEFRPEAFLLGLRRSRKPLKALLLDQTLAAGVGNIYADEAL 105 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD--YVHIDGSIG 247 +RA LSP R R + + +L Q +++VL +A+ GGS+L D Y DG G Sbjct: 106 FRAGLSPFRLGREVSEEEAL------RLFQALREVLAEAVALGGSTLSDRTYQQPDGLPG 159 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQ +VYG+TG PC CG I + V AGR T YC CQ+ Sbjct: 160 GFQKRHAVYGRTGLPC-PRCGAPIAKGVVAGRGTHYCPRCQR 200 >gi|240172877|ref|ZP_04751536.1| hypothetical protein MkanA1_26427 [Mycobacterium kansasii ATCC 12478] Length = 287 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 106/289 (36%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F +A G + R KYL Sbjct: 1 MPELPEIEALVDHLRRHAVGLPIGRVDVAALSVLKTFDPP-VSALHGHTVTAADRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + + L +I HL +G A P++ + + + L + + Sbjct: 60 GLRADP-LWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGIPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ P + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDPK----HVPGIAALGPDALELSTEDLAGLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSAGQ------LATLHDAMVSVLSDAVHRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPRCQ 271 >gi|145222442|ref|YP_001133120.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315442889|ref|YP_004075768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|145214928|gb|ABP44332.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315261192|gb|ADT97933.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 287 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F +A G+++ +R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVASLSVLKTFDPP-VSALVGREVTAANRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L +I HL +G A P+K + + + L Y + Sbjct: 60 GLQA-GDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGEAPGYDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV L + P S T ++ +K + +QK+++G Sbjct: 119 QKRLAVWLVTDPLAV----PQIASLGPDALSLTLPAFTEMLSGESGRIKTVITDQKVISG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP L + L + VL DA+ + Sbjct: 175 IGNAYSDEILHVARLSPFATANKLTEAQR------ADLYDAMITVLTDAV-----TRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC C +R + A +S YC CQ Sbjct: 224 QQAATLKGEKRSGLRVHARTGLPC-PVCVDTVREVSFADKSFQYCATCQ 271 >gi|322434760|ref|YP_004216972.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] gi|321162487|gb|ADW68192.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] Length = 307 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 107/293 (36%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L ++ +T L + G+ + V R K+L Sbjct: 1 MPEGDTIYRSARALGKALEGQIITAFDTGLATL---ASVNDDKPLVGRTVDKVESRGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ + T + + + +T + Sbjct: 58 LIHFSGDLILVTHMLMSGSWHLYRTGEKWWMGRN-----RMRVALSTEGWQAVAFNVPIA 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F +E S + L A + ++ + LLNQ+++AG+ Sbjct: 113 EFHTARSLERSSQVPKLGPDVLAEGFTVEQGVARLREYGQQHPDAEIAVVLLNQRVLAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA---GGSSLR 237 GN+Y E + A ++P R ++ ++ K L + G Sbjct: 173 GNVYKSEVAFAAGVNPFRAMSTITDQEMDI------MVDRSHKWLKVNVLDGAGDGIVTY 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + G ++ VYG+ G+ C CG +++ Q RST++C CQ Sbjct: 227 SGNRRTTNSGNREDRLWVYGRQGQEC-RRCGALVQMRKQGEQARSTYWCPACQ 278 >gi|302870627|ref|YP_003839264.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|302573486|gb|ADL49688.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] Length = 286 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 109/291 (37%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L V + L+ P +A G+ + R K+ Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPP--PSAVAGRAVTGAGRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH--VTISLTNNTNTKKYRVIYN 117 L + + L ++VHL +G A P V + L + + + + Sbjct: 59 LDVRFDEGLHLVVHLARAGWLHYREAFPATTPLRPGKGPIAVRVRLDDGSG---FDLTEA 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ LV Q P + LGP+ + + + + +K L +Q ++ Sbjct: 116 GTQKKLAAYLVT--DPAQVPGVAKLGPDALEA--DLPTFAERLRSRRGQVKGVLTDQSVL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L A+LSP T L + L L + VL DA+ Sbjct: 172 AGVGNAYSDEILHAARLSPFAITDRLTDDQ------LAGLHAATRTVLGDAVRRSMG--- 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG +R + A S YC CQ Sbjct: 223 --QRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|315506864|ref|YP_004085751.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|315413483|gb|ADU11600.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 286 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 109/291 (37%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L V + L+ P +A G+ + R K+ Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPP--PSAVAGRAVTGAGRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH--VTISLTNNTNTKKYRVIYN 117 L + + L ++VHL +G A P V + L + + + + Sbjct: 59 LDVRFDEGLHLVVHLARAGWLHYREAFPAATPLRPGKGPIAVRVRLDDGSG---FDLTEA 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ LV Q P + LGP+ + + + + +K L +Q ++ Sbjct: 116 GTQKKLAAYLVT--DPAQVPGVAKLGPDALEA--DLPTFAERLRSRRGQVKGVLTDQSVL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L A+LSP T L + L L + VL DA+ Sbjct: 172 AGVGNAYSDEILHAARLSPFAITDRLTDDQ------LAGLHAATRTVLGDAVRRSMG--- 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG +R + A S YC CQ Sbjct: 223 --QRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|225442888|ref|XP_002263635.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 403 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 + ++L+ GM+G+ I+ + K ++ + S + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+E PP+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLE--DPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AGIGN E L+ A++ P++ SL + + K + Sbjct: 179 SYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQV---------------- 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 + + + F + + + + +P + G+ I I GR+T Y QK Sbjct: 223 -IEKAMEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQK 277 >gi|262201295|ref|YP_003272503.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] gi|262084642|gb|ACY20610.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 111/296 (37%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I + + + + + ++ ++A G+ + V R KYL Sbjct: 1 MPELPEVAAIADYVDSRAAGLPIRRVDVASLSVLKTADPPYTA-LVGRIVESVGRVGKYL 59 Query: 61 --------LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + E + +++HL +G +P++ + + + + ++ + Sbjct: 60 VIRTVPGADTDPEPVILLVIHLSRAGWLRWSEDLSPRPLRPGGKSPIALRVHCGLPSEGF 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V ++ + +V S + +KN L Sbjct: 120 DVTEAGTQKRLAVWIVRDLADIDRVATLGPDVLSLSVSEFG----AILAQTAGRIKNVLA 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AGIGN Y E L A+LSP +SL + + L ++ VL DA Sbjct: 176 DQRVMAGIGNAYSDEILHTARLSPFATAKSLTEEQ------VSTLYDAMRSVLADATGRL 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+ +TG PC CG +R + A RS YC CQ Sbjct: 230 EGQTVARLKSEKRTG-----LRVHARTGLPC-PVCGDTVREVSFADRSFQYCPTCQ 279 >gi|309807139|ref|ZP_07701116.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] gi|308166490|gb|EFO68692.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] Length = 197 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 9/206 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQK----HEHVQFTFSDNT-----YLRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN 206 GNIY E LW++K+ P+ + Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIATR 197 >gi|255553261|ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 403 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R+ + + + D P F AA GK +I R+ K Sbjct: 1 MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDGVSPSDFEAALVGKTLISAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L ++L+ GM+G+ I+ + K ++ ++ S + Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ PP+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLN--NPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P + S K+ L++ I++V+ AI Sbjct: 179 SFISGIGNWIADEVLYQARIHPQQSASSFT------KESCATLLKCIKEVIEKAI----- 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 ++ F N++ + + +P + G+ I I GR+T Y QK Sbjct: 228 ------EVEADSSQFPNSWIFHSREKKPGKAFIDGKKIDFITSGGRTTAYVPELQK 277 >gi|307130091|ref|YP_003882107.1| Endonuclease VIII [Dickeya dadantii 3937] gi|306527620|gb|ADM97550.1| Endonuclease VIII [Dickeya dadantii 3937] Length = 262 Score = 125 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + F + A G+++ + R K L Sbjct: 1 MPEGPEIRRAADRLVAAVVGKTLTGVWFA-----FPELKPYEATLMGEQVERIVTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + H + G + + + + L + N Sbjct: 56 LTRFSNGLVMYSHNQLYGVWRVGKQ------PPDTRRELRVRLDTDDNAVSL-------Y 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + ++ +P L+ +GP+ D S + + L LL+Q + Sbjct: 103 SASDIAMLTPEQLATHPFLQRIGPDVLDESLTVDEVRERLLSARFCRRQLGTLLLDQGFL 162 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW + L+P R+ L + L L + + ++ + GS Sbjct: 163 AGLGNYLRVEILWASALAPTRRAADLSEAE------LAMLSRMLLEIPRLSYQTRGSESD 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F V+ GEPC CGQ I + + A R + C +CQ+ Sbjct: 217 ERRH-HGAL----FRFHVFHLDGEPC-ERCGQPIVKSLVASRPFYACPHCQQ 262 >gi|119714424|ref|YP_921389.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|119535085|gb|ABL79702.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] Length = 288 Score = 125 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L + + I + + F SA G + DV+R K+L Sbjct: 1 MPELPEVEALALDLRGRLDGHAIAKIHVAAFSALKTFDPPLSA-LEGTLVDDVTRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH--VTISLTNNTNTKKYRVIYND 118 IE L +++HL +G P K + V I L + + + + Sbjct: 60 DIEA-SGLHLVLHLARAGWVRWRDEVPTIPPKPSTKSTLAVRIVLDDQSG-----LDVTE 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 + + + P + +LGP+P + F L ++ LK L +Q + Sbjct: 114 AGTRKSLAMYVVRDPHDVPGIASLGPDPLTDEFTIDRLREILEREGRKQLKGVLRHQGTI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L A++SP + +L + L L ++ L DA+ Sbjct: 174 AGIGNAYSDEILHAARMSPFKAAGTLTDDE------LQVLYDALRGTLGDAVGRSRG--- 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ +V+G+ G+ C CG +R + A S YC CQ Sbjct: 225 --LAASELKGEKKSHLAVHGRAGQAC-PVCGDTVREVSFADSSLQYCPTCQ 272 >gi|111019239|ref|YP_702211.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110818769|gb|ABG94053.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 288 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 110/290 (37%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F + +G+ + +R K+L Sbjct: 1 MPELPEVEALAEFLREHAVGAVVGRVDVAALSVLKTFDPPIT-GLQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYND 118 ++ L ++ HL G A P K + T T + + Sbjct: 60 ALD-CSGLWLVTHLSRGGWLRWTDNPSAAPPKPGKGPLALRVHFFTPEGATPAFDLTEAG 118 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V + + ++ +KNAL++Q ++A Sbjct: 119 TKKRLAVWVVHDPQEVEGIARLGPDALAVTE----PEFAALLSTTSARIKNALVDQSLLA 174 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AK+SP +R+L ++ L ++ VL DA+ Sbjct: 175 GVGNAYSDEILHTAKISPFATSRTLPEDQVHV------LYDAMRSVLSDAVQRSLG---- 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR + A +S YC CQ Sbjct: 225 -QDAARLKGEKRSGMRVHARTGLPC-PVCGDTIREVSFAEKSFQYCATCQ 272 >gi|222640316|gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group] Length = 415 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRV 114 L + L+ GM+G+ I+ +K + + + S Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + + PP+ LGP+ + +K + +K LL+Q Sbjct: 121 SFTDKRRFAKIRFL--DNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ K+ L Q I +V+ +++ G + Sbjct: 179 SFISGIGNWIADEVLYQARIHPMQTAS------MISKEKCKALHQCIIEVIEKSLEVGCN 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 S + + + + + +P + G+ I I GR++ Y QK Sbjct: 233 SSQ-----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQK 277 >gi|218200905|gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group] Length = 415 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRV 114 L + L+ GM+G+ I+ +K + + + S Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + + PP+ LGP+ + +K + +K LL+Q Sbjct: 121 SFTDKRRFAKIRFL--DNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ K+ L Q I +V+ +++ G + Sbjct: 179 SFISGIGNWIADEVLYQARIHPMQTAS------MISKEKCKALHQCIIEVIEKSLEVGCN 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 S + + + + + +P + G+ I I GR++ Y QK Sbjct: 233 SSQ-----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQK 277 >gi|220912308|ref|YP_002487617.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] gi|219859186|gb|ACL39528.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] Length = 289 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ +T + + + F A G+ + V R K++ Sbjct: 1 MPELPEVAGLATFLDGQLRGAVLTKLQVVSFAVLKTADPPF-NAIEGRTVAGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 I+ EG ++ HL +G + +K + V + + + + + Sbjct: 60 SIDTEGMS-LVFHLARAGWLRFTDSPADSQLKMGKGMIAVRCAFSGPDGPRGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + +V P + LGP+P +F+A L + +K L +Q ++AG Sbjct: 119 RKSLAVYVVR--DPQDVPGIAALGPDPFTEAFDAGMLAEILGASSQQIKGLLRSQSVIAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP +S + T + + + + + + +A G +D Sbjct: 177 IGNAYSDEILHAARISPFATAKS--LDRETVQVLYEAIHGILGEAMAEA---QGKPPKDL 231 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+ +TG PC CG +R + A + YC CQ Sbjct: 232 KDVK------RSHMRVHARTGLPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|56750239|ref|YP_170940.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] gi|56685198|dbj|BAD78420.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] Length = 239 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 79/251 (31%), Positives = 115/251 (45%), Gaps = 22/251 (8%) Query: 44 ATRGKKIIDVSRRAKYLLIE----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 A + +I + RR KYLL + E + VHL M+G F + H V Sbjct: 2 ALQQTQIQEWRRRGKYLLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLTK----HTRV 57 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLT 157 + + + + D R FG M V + L LGPEP F A YL Sbjct: 58 RLRFEGDR-----ELRFIDIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLR 112 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + + +K ALL+Q +VAGIGNIY E+L+R + P + L K KL Sbjct: 113 DRLRRSQRPIKTALLDQSLVAGIGNIYADESLFRTGIHPTTPSDRLT------KIQAEKL 166 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + I +VL +I AGG++ D+ + G G + VYG+ +PC CG I+++ A Sbjct: 167 REAIVEVLTASIGAGGTTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLA 225 Query: 278 GRSTFYCTYCQ 288 GRS+ +C CQ Sbjct: 226 GRSSHFCPRCQ 236 >gi|296141029|ref|YP_003648272.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] gi|296029163|gb|ADG79933.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] Length = 290 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 105/291 (36%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ I + + TV + + ++ F G + R KY Sbjct: 1 MPELPEITAIAQYVAEKAVGTTVRRVDVAALSVLKTFSPGPHE-LVGATVTGTDRIGKYF 59 Query: 61 LIELEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ E + + VHL +G P+K + + + + + + + Sbjct: 60 VLWTEKEGARVALVVHLSRAGWLRWSEKLAPTPLKPGGKSPIALRVHVGPEGEGFDLTEA 119 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + + + + LKN L +Q+ + Sbjct: 120 GTQKRLAVWIVHDPSEIEMVATLGPDALTVSRAEFG----AILAGSRAQLKNLLRDQRTI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AKLSP +SL + L + L DA+ Sbjct: 176 AGIGNAYSDEILHTAKLSPFAGAKSLDEAQTD------ALYAAMHTELDDAVARSVGQHV 229 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TG PC CG +R + A RS YC CQ Sbjct: 230 ATLKAEKRSG-----MKVHGRTGSPC-PVCGDTVREVSFADRSFQYCPTCQ 274 >gi|239944741|ref|ZP_04696678.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 15998] gi|239991205|ref|ZP_04711869.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 11379] gi|291448200|ref|ZP_06587590.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291351147|gb|EFE78051.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 289 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 107/302 (35%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHAALAGQVLT-----RSDLR--VPRFATADLTGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + P H I YR+ + Sbjct: 54 LTRIEGGLTLHSHLRMDGAWRVF-APDERWRGGPGHQIRAILGNTGHTAVGYRLPVLELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + + AI L + L ALL+Q+ +AGI Sbjct: 113 R---------TDEEDRAVGHLGPDLLGPDWDPAIALDRLLAVPDRPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL-YKLIQEIQKVLIDAIDAGGSSLRDY 239 GN+Y E + A+++P +L L +L+ + Sbjct: 164 GNVYKSELCFLARVTPWLPVGALPDGVLPRLVTLAERLLHANRDRPTRTTTITSELRTPP 223 Query: 240 VHIDG-----SIGYF--------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 G G Q VYG+ PCL CG IR Q R T++C Sbjct: 224 TRGPGPAPVLDSGRPRPRPPHRVQERLYVYGRARRPCL-RCGTPIRLAGQDDRPTYWCPG 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|256393641|ref|YP_003115205.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] gi|256359867|gb|ACU73364.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] Length = 288 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + V + SA G+ + V+R K+L Sbjct: 1 MPELPEVQALAAFLDEHLAGHAVAAATPVAIQALKTYDPPLSA-LEGQVVSGVTRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 G++ +++HL +G + P + + + + + + Y Sbjct: 60 DF-SVGDVHLVLHLARAGWVRWQEELPTAPPRPGKGPLALRVRMEEPAGSGIDVTEYGTK 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + P + LG +P F A L + +K L +Q ++AG Sbjct: 119 KGLAVYVVR---DPAEVPGIARLGIDPLSAEFTAEVLAGLLDGERRQIKGFLRDQSVLAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + L + + L Q I L DA++ Sbjct: 176 IGNAYSDEILHAARMSPYKLAAKLTPDE------VADLYQVIIGTLTDAVERSRGLPMKD 229 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG IR + A + YC CQ Sbjct: 230 LKSEKKSG-----LRVHGRTGEKC-PVCGDTIREVSFADSALQYCPTCQ 272 >gi|50953934|ref|YP_061222.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950416|gb|AAT88117.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 287 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 107/289 (37%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + +L + + + + F A I VSR K+L Sbjct: 1 MPELPEVTALAADLEKRLSGHVIDRLSVVAFAALKTFDPS-PDALHNATITSVSRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G L +I+HL +G P P + L + + + Sbjct: 60 DI-AAGELHLIIHLARAGWIGWCQGPPPAPTGWPSKGPLAARLVLEDGSG---LDITEAG 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + + P + LGP+P D +F + +K L NQ ++AG Sbjct: 116 TRKSLSISVVRDPAEVPGVARLGPDPLDPAFTRDVFAAILAGQGRAQIKGVLRNQGLIAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP + L +L +Q L +A+ Sbjct: 176 IGNAYSDEILHVAKMSPFKPAALTDDE-------LDRLYTAVQSTLREALTRADGLAASE 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TG PC CG +R ++ A + YC CQ Sbjct: 229 LKSEKKSG-----LRVHGRTGRPC-PICGDTVREVIFADSTLQYCPTCQ 271 >gi|269139935|ref|YP_003296636.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|267985596|gb|ACY85425.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|304559770|gb|ADM42434.1| Endonuclease VIII [Edwardsiella tarda FL6-60] Length = 280 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + T+T + +L ++A G +I + R K L Sbjct: 1 MPEGPEIRRAADGLRAAVGGGTLTRVWFGAPSL-----QRYAAGLVGCQITAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + P + + L ++ ++Y+ Sbjct: 56 LIHFSNGMSMYSHNQLYGVWRVAAAG----ETPPTSRSLRVRLE---TAERAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + L LL+Q+ + Sbjct: 109 ----IQLAPRAQILRHPFLLRIGPDVLDPALTEAQVRERLCSPAFCRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A +SP R+ L T + + L+ A+ + R Sbjct: 165 AGLGNYLRVEILWQAGVSPQRRATELSPAQLTS--LCHALL---------ALPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G F V+ + GE C CG + R A R + C CQ Sbjct: 214 GQVDEGRHHGAL-FRFRVFHRAGEAC-ERCGTTLVRAQAASRPFYGCPRCQ 262 >gi|226361374|ref|YP_002779152.1| DNA glycosylase [Rhodococcus opacus B4] gi|226239859|dbj|BAH50207.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 288 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 111/290 (38%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAEFLRKHAVGAVVGRVDVAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYND 118 ++ L ++ HL G P K + T T + + Sbjct: 60 ALD-CSGLWLVTHLSRGGWLRWTDNPSVAPPKPGKGPLALRVHFFTPEGATPAFDLTEAG 118 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + LV + + ++ +KNAL++Q ++A Sbjct: 119 TKKRLAVWLVHDPREVEGIARLGPDALAVTE----PEFAALLSTTSARIKNALVDQSLLA 174 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AK+SP +R+L ++ L ++ VL DA++ Sbjct: 175 GVGNAYSDEILHTAKISPFATSRTLPEDQVHV------LYDAMRSVLTDAVERSLG---- 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 225 -QDAARLKGEKRSGMRVHARTGLPC-PVCGDTVREVSFAEKSFQYCATCQ 272 >gi|56962663|ref|YP_174389.1| hypothetical protein ABC0889 [Bacillus clausii KSM-K16] gi|56908901|dbj|BAD63428.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 267 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+ ++ L + +TD+ ++R+ F AA + + + +VSRR K L Sbjct: 1 MPEMPEMATYQKWLTRTVVGQMITDVEVNREKSINVPVVEFKAAVQHQIVTEVSRRGKQL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +++HL + G A V +S + ++++ + Sbjct: 61 LFHLANGHMLLLHLMLGGWMYWGTEEDAPDRTK----QVILSFS------RHKLYF---I 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + P L LGPE +S NA K + +K L NQ ++GI Sbjct: 108 GLRLGYIHLHDQQSAKPILAKLGPEA--SSINADEFKKIAKHKRTMVKPFLTNQAHLSGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + AK+ P+R SL L L Q I L A DAGG + Sbjct: 166 GNCYADEICYHAKMIPLRTIDSLSSKE------LAALHQAIAPTLQAAADAGGYMSHPFT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE C CG I R + ++ F+C CQ Sbjct: 220 SSDRLTGGMNSKLYVYDREGEACF-RCGNPIIRQEASKKNVFFCQVCQ 266 >gi|289805554|ref|ZP_06536183.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 258 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 105/287 (36%), Gaps = 32/287 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR----ILRVRLQ---TADKIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + G F V+ + GE C CG +I + + R ++C Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWC 258 >gi|254425007|ref|ZP_05038725.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] gi|196192496|gb|EDX87460.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] Length = 277 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 105/294 (35%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I + ++ T++ FD F A G ++ +V R K + Sbjct: 1 MPEGPEIRIAADKIQRAIRPYPTTEVFFA-----FDHLKPFEADLSGCRVTEVETRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + LS+ H + G +++ + N KK ++Y+ Sbjct: 56 LTHFDNGLSVYTHNQLYGKWMVRKAHDFPETNRQLRFAIH-------NEKKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 L S +P L LGP+ L L L+Q + Sbjct: 109 ---IQILSSQSEIENHPFLSKLGPDVLSKQLKPEVLQALLSAKKHCCRRLSTLYLDQHFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A+L P + L+ L + + G + Sbjct: 166 AGIGNYLRSEILFVAQLHPQMRPIDCTDEQ------LFTLANASISIAYQSYRYKGVTND 219 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D + + G Y + + V+G+ +PC + C I + + + R +YC CQ Sbjct: 220 LDLANRLKAKGLSYREYRYRVFGRVNQPCYA-CATPIIKEMVSNRRIYYCPTCQ 272 >gi|126433893|ref|YP_001069584.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|126233693|gb|ABN97093.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 257 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 99/289 (34%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + PH+ + G + +V R K+L Sbjct: 1 MPEGDTVYRTATALREGLVGKTLTRCDVR-------VPHYATVDLTGHVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + S + I L + + Sbjct: 54 FIRVGPAS-IHSHLKMEGSWKVVPASRPSRAG----YRIRIILEAGEGEQAVQ---AAGI 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++++E + D+ + + + L ALL+Q+++AG+ Sbjct: 106 DLGVLEILERDHDMETVAHLG-PDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAGV 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A P R L + L + Sbjct: 165 GNVYANELCFVAGHLPTAPVRDLKDPLRMVQRARDMLWLNRSRWNRT------------T 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 213 TGDARPGR---DVWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|29829043|ref|NP_823677.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29606149|dbj|BAC70212.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 280 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 111/292 (38%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVYQAARRLHSALAGKVLT-----RSDLR--VPKFATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T + + YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGSWKVYAPGQ-RWSGGPAHQIRAIFGTADRTSVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++L+ T+ +++ + + L ALL+Q+ +AGI Sbjct: 107 --PVLELLRTADEHRAVGHLG-PDLLGPDWDPDRARENLLRDPARPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + +P L + L K + E + Sbjct: 164 GNVYKSELCFLLRATPWLPVGDLPAEHLAQLPALAKKLLETNR---------------DR 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G + VYG+ PCL CG +R Q R T++C CQ Sbjct: 209 PARSTTGRREQRLFVYGRAPRPCL-RCGTPVRVADQGDGSRERPTYWCPACQ 259 >gi|119962635|ref|YP_948112.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949494|gb|ABM08405.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 293 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + +T++ ++ L+ P + A G+ I+ R K+ Sbjct: 3 MPELPEVHGLCMYLDTQLHGAVLTEVRINSFSALKTADPPY--TALEGRTILGAKRIGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + I+ +G L + HL +G EH S A + + L + V + Sbjct: 61 VCIDADG-LFFVFHLAKAGWVRYTEHPSSAGLRMGKSNISARLLLHRPADDAHIGVDLTE 119 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + P + TLGPEP F+ L + +K L +Q ++A Sbjct: 120 AGTKKSLAIYVVKDPQDVPGIATLGPEPLSPDFDLDALAGILGSSSQQIKGLLRSQSVIA 179 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E L A++SP +SL Q + +L +Q+VL+ A++A Sbjct: 180 GIGNAYSDEILHAARISPFATAKSLDQA------TVARLYAAMQEVLVGAVNAAAGKPSS 233 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ F V+ +TG+PC CG +R + A S YC CQ Sbjct: 234 ELKDTK-----RSNFRVHARTGQPC-PVCGDTVREVSFADTSLQYCPTCQ 277 >gi|205374796|ref|ZP_03227589.1| endonuclease VIII [Bacillus coahuilensis m4-4] Length = 273 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + +K T+ ++ F F RG I V + K + Sbjct: 1 MPEGPEIRRAADQVEKAIKGRTIEEMYFA-----FPHLEEFEELFRGATCIRVDTKGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ +I H + G + + + N KK ++Y+ Sbjct: 56 LIRLDNGYTIYSHNQLYGRWYSRNVYNYPKTNRVLRMAIH-------NEKKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 +D++ +P ++ +GP+ A L +FH LL+Q + Sbjct: 109 ----IDVLRNEEVENHPFIKKVGPDILSERVTAEELVERFHQKRFYRRMWSGLLLDQAFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A++ P + + L L + +++ + GG + Sbjct: 165 AGIGNYLRSEILYMARIHPTLRPVDCSLSQ------LESLAESTIHLMVQSYKMGGITNN 218 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + V G + V+ + GE C CG+ I +++ A R +YC YCQ+ Sbjct: 219 LELVERLKKQGVKRSKYRHWVFNREGESCF-QCGREIEKMMAASRRAYYCPYCQR 272 >gi|297625311|ref|YP_003687074.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921076|emb|CBL55617.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 287 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 114/292 (39%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELP+VE + L + + + + FD P A G+ + ++R K Sbjct: 1 MPELPQVEALADFLRTDLVGSVIERLEVGAISALKTFDPPPD---ALVGRTVTAINRFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYN 117 +L ++ G L ++ HL +G + + IK + + + L + + Sbjct: 58 HLDVDAGG-LHLVFHLARAGWLVWREKVPSTVIKPGKSRIALRVRLQGGAG---FDLTEA 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKI 176 +R + +V Q P + +LGP+P F LK L +Q + Sbjct: 114 GTQRKLAVWIVR--DPQQVPSIASLGPDPMAPGFTPAVFRQILAGAGRAQLKGILRDQHV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L AKLSP + +L + + +L I+ L A + Sbjct: 172 IAGIGNAYSDEILHDAKLSPFKPAANLTDDE------VERLYAAIRDGLAAATERARGLA 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D + ++G G+PC CG I + A S YC CQ Sbjct: 226 ARDIKADK-----RAQLRIHGHAGDPC-PVCGTPIASVNFADSSLQYCPVCQ 271 >gi|330470731|ref|YP_004408474.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] gi|328813702|gb|AEB47874.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] Length = 286 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + + +A G+ + D R K+L Sbjct: 1 MPELPEVEALAGYLRQRAVGRRVERLEAVAISALKTYDPALTA-VTGRSVTDARRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV--TISLTNNTNTKKYRVIYND 118 + +G+L ++VHL +G + P + L + + + + Sbjct: 60 DVVFDGDLHLVVHLARAGWLHYREAFASTVPLRPGKGPIALRARLDDGSG---FDLTEAG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + LV P + LGP+ A + + LK L +Q ++A Sbjct: 117 TQKKLAVYLVT--DPQAVPGVAKLGPDALSADLAAFAGALRS--RRGQLKGVLTDQAVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP T L + L ++VL DA+ + Sbjct: 173 GVGNAYSDEILHAAKLSPFALTDRLTDDQM------ATLHAATRRVLGDAV-----TRSL 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 222 GQRAAELKGEKRSGLKVHARTGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|119500164|ref|XP_001266839.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] gi|119415004|gb|EAW24942.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] Length = 367 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 109/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFIDQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKEWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR + LV+ + P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPAEEIRKHSPLKDNGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWGK-GKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|70993580|ref|XP_751637.1| formamidopyrimidine-DNA glycosylase [Aspergillus fumigatus Af293] gi|66849271|gb|EAL89599.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus Af293] Length = 367 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 109/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR + LV+ + P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWGK-GKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|255947552|ref|XP_002564543.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591560|emb|CAP97795.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] Length = 370 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 114/302 (37%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL E+ I + + T++ + ++ F F A +GKKI+ ++ Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSGAEFQKAMQGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I+ KP L + K Sbjct: 61 GKYFWMTMSSPPHAVMHFGMAGWLKIKDADTYYYRSDKPADQEWPPKYWKFLLETNDESK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ P ++ + +LT + KK + Sbjct: 121 TEAAFVDARRLGRIRLVDCPADEIRDHTPLKENGPDPVTDKDTVDEAWLTEKLGKKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + + L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNADQ------IKDLHSAIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I S + H F++ + GK +P + G I + GR++ Sbjct: 235 SIGVLADSEKFPEHW-----LFKHRWGK-GKKNQPAVLPNGDKITFLTVGGRTSAVVPAV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|159125439|gb|EDP50556.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus A1163] Length = 367 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 109/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR + LV+ + P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWGK-GKKNKPPVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|145229675|ref|XP_001389146.1| formamidopyrimidine-DNA glycosylase [Aspergillus niger CBS 513.88] gi|134055255|emb|CAK43841.1| unnamed protein product [Aspergillus niger] Length = 375 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 112/302 (37%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T++ + + ++ + F A GKK+ ++ Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRDADTYYYRTDKPGDKEWPPKYWKFLLETEGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + P + + +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++AK+ P + + +L + + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDDDQ------IRELHSAIHYICST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +++ S + F++ +S GK P + G+ I + GR++ Sbjct: 235 SVELLADSEKFPADW-----LFKHRWSK-GKKNTPSVLPNGEKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|258650476|ref|YP_003199632.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] gi|258553701|gb|ACV76643.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] Length = 294 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 107/298 (35%), Gaps = 30/298 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L +T + + N+ + ++A G+ + R K+L Sbjct: 1 MPELPEVTALAAFLTEHAGGQRITAVSVAALNVLTTYDPP-ASALVGRTVTGAGRHGKFL 59 Query: 61 L----------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L +I+HL +G +P K + ++L+ Sbjct: 60 DLVTAPGPDASPGTPDALHLILHLARAGWLRWSDAISPRPPKMGGPIALRVALSGGGGFD 119 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + P + LGP+ D A L + +KN Sbjct: 120 VTEAGTKKSVTAAVVT-----DPRAVPGVARLGPDALDLDRAA--LAQVLATQTGRIKNV 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L +Q+++AG+GN Y E L A+LSP L + L +L + VL DA+ Sbjct: 173 LTDQRVIAGVGNAYSDEILHTARLSPFATAAKLSPDE------LDRLYDALATVLTDAVL 226 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + V+ +TG PC CG ++ + A RS YC CQ Sbjct: 227 RSVG-----GQAARLKGEKRTGLRVHARTGLPC-PVCGDVVAEVSFADRSFQYCPTCQ 278 >gi|323357079|ref|YP_004223475.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273450|dbj|BAJ73595.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 287 Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 116/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE + L + + V+ + N + +A G + V R K++ Sbjct: 1 MPEMPEVEGLVEFLRGRVTGLQVSKATVSAINALKTYDPPLTA-LVGSAVTAVDRHGKFV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + + + +I HL +G + IK + + + + + + + Sbjct: 60 DVSTDAGVHLIFHLAKAGWLRWYDALPSTIIKPGKTPIALRVGFDDGSG---FDLTEAGT 116 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + V + + P + LGP+P F+ + + +K L +Q I+AG Sbjct: 117 KKSLAVYAVRSPDE--VPGIARLGPDPLSEGFDRATFGALLTGRRTQIKGVLRDQSIIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AK+SP +L + + +L + + + L +AID Sbjct: 175 VGNAYSDEILHAAKMSPYALAATLTDDE------VDRLFRAMVETLTEAIDEARGKPPAE 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+ GE C CG +R + A S YC CQ Sbjct: 229 LKDAKRRG-----MRVHGRRGEAC-PVCGDEVRSVYFADNSLEYCPTCQ 271 >gi|108798236|ref|YP_638433.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119867332|ref|YP_937284.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|108768655|gb|ABG07377.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119693421|gb|ABL90494.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] Length = 257 Score = 122 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 97/289 (33%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + + G + +V R K+L Sbjct: 1 MPEGDTVYRTATALREGLVGKTLTRCDVR-------VPRYATVDLTGHVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + S + I L + + Sbjct: 54 FIRVGPAS-IHSHLKMEGSWKVVPASRPSRAG----YRIRIILEAGEGEQAVQ---AAGI 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++++E + D+ + + + L ALL+Q+++AG+ Sbjct: 106 DLGVLEILERDHDMETVAHLG-PDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAGV 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A P R L L + Sbjct: 165 GNVYANELCFVAGHLPTAPVRDLKDPLRMVHRARDMLWLNRSRWNRT------------T 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 213 TGDTRPG---RDVWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|238060842|ref|ZP_04605551.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237882653|gb|EEP71481.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 283 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 26/296 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDRVRAASPQGRF---AEGAALLSGTVLEGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G L++ VHLG+ G F + P V + LT++ ++ + R Sbjct: 58 HAGGLTLHVHLGLYGRF-----ADGPGEPPPPVGQVRLRLTSDGSSTGRTGSESPDDRHW 112 Query: 124 FMDLVETSLKYQYPP-----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + PP LGP+P + + + + L LL+Q +VA Sbjct: 113 LDLRGPNACELLTPPEVAALRDRLGPDPLRADADPARAYARISRSPTPLAALLLDQSVVA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G G I+V EAL+RA LSP+ R L +L ++ +++ A++ G Sbjct: 173 GTGLIFVTEALFRAGLSPLLPGRELAPARW------RELWIDLVELMTRAVEVGRIDTVR 226 Query: 239 YVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H+ + G VY + G+PC CG +RR AGR+ ++C CQ Sbjct: 227 DAHLPEATGRAPRVDRHGGEVYVYRRPGQPC-HVCGDEVRRGALAGRNLYWCPTCQ 281 >gi|116670100|ref|YP_831033.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116610209|gb|ABK02933.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 316 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 20/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ +T I + + ++A G+ I V RR K++ Sbjct: 21 MPELPEVAGLGAFLGDRLRGAVLTKIQIVSFAVLKTADPPYTA-LEGRTISGVQRRGKFI 79 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP------QHNHVTISLTNNTNTKKYRV 114 +I+ +G + HL +G + + + I + + Sbjct: 80 IIDADGIY-LAFHLAKAGWLRYTESPSNALLPRGKGYIAARFEFSRIRPDADGGEAHLGI 138 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + + L P + +LGP+P SF + +K L NQ Sbjct: 139 DLTEAGTKKSLALYVVRDPEDIPGIASLGPDPLSASFTLDAFAEILSSSSQQIKGLLRNQ 198 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AGIGN Y E L A++SP +SL + + + + + + +A+ + Sbjct: 199 GVIAGIGNAYSDEILHAARISPFATAKSLDPE--SVRVLYDSVHNILGAAVAEAVGKAPN 256 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L+D ++ V+G+TG+ C CG +R + A R+ YC CQ Sbjct: 257 ELKDAK---------RSTMRVHGRTGQAC-PVCGDTVREVSFADRALQYCPRCQ 300 >gi|320105899|ref|YP_004181489.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] gi|319924420|gb|ADV81495.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] Length = 301 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 103/290 (35%), Gaps = 14/290 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L V++ TVT L + G+ I V R K+L Sbjct: 1 MPEGDTLFRAARALAKVLEGRTVTAFETAYAKL---ASVNDDRPVLGRVIEKVEARGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ I T P+ + V Sbjct: 58 LIHFSGDLILVTHMLMSGSWHIYRTGEKWWS--PRSAMRVRVAVEGVEAVAFNV---PVA 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F ++ + L + + + + N LLNQ+++AG+ Sbjct: 113 EFHTTASLKRDAMVEKLGPDVLSASYSGDVGLVALQKRMVSHPDDEIANVLLNQRVLAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A++ P R R+L + + Q + + G Sbjct: 173 GNVYKSEVCFAARVHPFRAMRTLTVDEMQQMADVS---QRYMQANVLDGAGDGIVTYSGN 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFYCTYCQ 288 + VYG+ G C CG ++ R+ RST++C CQ Sbjct: 230 RRTTRSANAADRLWVYGRRGLEC-RRCGGIVEMRKQGVGARSTYWCPDCQ 278 >gi|284988837|ref|YP_003407391.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] gi|284062082|gb|ADB73020.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] Length = 284 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 111/289 (38%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L VT + L F SA G ++ V+R K+L Sbjct: 1 MPELPEVEALTAFLREHAVGSVVTRVDLAAVQAIKTFDPPLSA-LGGLELTGVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 +++ L ++VHL +G P K + V + L + + + Sbjct: 60 DLDV-SGLHLVVHLARAGWLHWRTGLPTAPPKPGKGPLAVRVHLEDGDG---FDLTEQGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + +V + + P + + ++ LK AL +Q ++AG Sbjct: 116 RKGLAVYVVRSPAEV----PGIARLGPDALAVDRDTFVALLAGRSGQLKGALTDQTLLAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP + L + +L ++ L +A+ Sbjct: 172 IGNAYSDEILHAARLSPFKMADKLSDDEAL------RLYDAMRATLTEALQRQVG----- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 221 QEAATMKGEKRSGLQVHARTGLPC-PVCGDTVREVSFADTSLQYCPTCQ 268 >gi|157369504|ref|YP_001477493.1| endonuclease VIII [Serratia proteamaculans 568] gi|157321268|gb|ABV40365.1| DNA-(apurinic or apyrimidinic site) lyase [Serratia proteamaculans 568] Length = 263 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 116/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T++ L H+ G++II + R K L Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVGFAFPQL-----KHYRDRLIGERIIAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + K + + L + ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWKVVKAGETPETKR----DLRVRLE---TADRAILLYSASE 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + + Q+P L+ +GP+ D + + + + L LL+Q + Sbjct: 109 ----ITVGPREEIEQHPFLQRIGPDVLDMTLTVAAVEQRLLSPAFRRRQLGGMLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K + L L +L + + V + G Sbjct: 165 AGLGNYLRAEILWQAELAPQHKPQDLAPE------TLQRLAEALLAVPRLSYQTRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 216 --VDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIERTTLSSRPFYWCPGCQK 263 >gi|119504953|ref|ZP_01627030.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] gi|119459239|gb|EAW40337.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] Length = 279 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 109/294 (37%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K+ + + L + +G I+ + R K L Sbjct: 1 MPEGPEIRRAADKIEAVLKDRVAEKVEFGLQPL-----KKYVKPLKGSNILALETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I H + G + + + ++Y+ Sbjct: 56 LTHFDSGFTIYSHNQLYGVWRVVKRDKLPKTNRQLRLAIH-------TDNHSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 + + +T ++P L+ +GP+ + + + + L + L+Q + Sbjct: 109 ----ISVWKTQNIEEHPFLQRIGPDILNPDLSWRTVAERLQSKAFSGRALNSVYLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A ++P +K R L + + KL + +V + G +L Sbjct: 165 AGLGNYLRSEILFIAGINPAQKARDLSKGQ------VGKLARTTLEVSQRSYALEGVTLP 218 Query: 238 DYVHIDGS---IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + Y + F V+G+ +PC C I+R R + C CQ Sbjct: 219 ERQYRTLKNQGVTYGKARFFVFGRARQPC-RVCKTKIQRSTANSRRIYTCATCQ 271 >gi|328885453|emb|CCA58692.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 274 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 102/292 (34%), Gaps = 34/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + T+T L P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTIWQTAHRLHTALAGRTLTRADLR-------VPRYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + T + L N +T Sbjct: 54 LARIEGGLTLHSHLRMDGAWRVYVTGQRPHGGPDH--QIRAILGNADHT-------AYGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGP--EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R ++L+ T+ + +L ALL+Q+ +A Sbjct: 105 RLPVLELIRTTDESGAVGHLGPDLLGPGWGAEEAEEATRRLLADPARSLGEALLDQRNMA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLR 237 GIGN+Y E + A ++P L + ++L+ + Sbjct: 165 GIGNVYKSELAFLAGVTPWVPVGDLGPDVPARLVATAHRLLDANKDRPDRRTTTTRRPGT 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G CL CG IR+ R T++C CQ+ Sbjct: 225 --------------PLHVYGRAGRSCL-RCGARIRKAELGDRVTYWCPGCQR 261 >gi|315042754|ref|XP_003170753.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] gi|311344542|gb|EFR03745.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] Length = 390 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 106/305 (34%), Gaps = 28/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T++ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTISKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINYV 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++D G S F + ++ GK G G+ I + GR++ Sbjct: 235 CSVSVDLKGESSDFPTDW-----LFHHRWNK-GKKGAAGKLPSGEPIVFVTVGGRTSAVV 288 Query: 285 TYCQK 289 QK Sbjct: 289 PSVQK 293 >gi|297156756|gb|ADI06468.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 105/292 (35%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L L + G++++DV+ R K+L Sbjct: 1 MPEGDTVWRTARRLDQALAGRQLTGCDLRIPRL-------ATVDLAGRQVMDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M G++ + + P H I T YR+ + Sbjct: 54 LTRLEGGLTLHSHLRMDGAWHLYDPG-ERWRGGPLHQVRAILSTAERTAVGYRLPVLELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L L ALL+Q+ +AGI Sbjct: 113 R---------TTDEDRAVGHLGPDLLGPDWDPHEALRRLLADPARPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + ++SP + + +L++ + A + R Sbjct: 164 GNVYKSELCFLVRVSPWLPVGQVPSPERLV-ALAKRLLEANKARPARITTAESRADR--- 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G+PCL CG + R+ Q RST++C CQ Sbjct: 220 -----------RLWVYGRAGKPCL-RCGTPV-RMEQGRADKERSTYWCPACQ 258 >gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] Length = 263 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 29/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV ++ + + + +I K + F SR KYL Sbjct: 1 MPELPEVAYQKKYADATILHKKIVEIETGDKKIYQSAKADFEKILTDNAFESTSRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ N +++H GM+G + P++ + + +++ ++ + PR Sbjct: 61 FLKLKKNGVLVMHFGMTGKL-----DYYQHDDTPKYTQLKLIFEDHS-----KLAFTCPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +F + L ++ ++Q ++ +K L+NQ ++AGI Sbjct: 111 KFAKLYLAKSVEEFQQSHNLGADALAITEKEFL----KICDGRSGTIKGLLMNQSLIAGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L++ K+ P K +L Q ++ I+E+ KV+ +A G Y+ Sbjct: 167 GNMYADEVLFQTKIHPKTKVNTLSQKQ---LKSIFDKIEEVLKVVKEARIEGKRVPESYL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G C I + +GR+T++C CQK Sbjct: 224 TRIRKEG-----------EGADC-PRNNGKIEQTKVSGRTTYFCPVCQK 260 >gi|289807172|ref|ZP_06537801.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 165 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 9/174 (5%) Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG + + L LGPEP + FN YL + KK + +K L++ K Sbjct: 1 YTDPRRFGAWLWTK--ELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNK 58 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++ Sbjct: 59 LVVGVGNIYASESLFAAGIHPDRLASSLSTEE------CDLLARVIKAVLLRSIEQGGTT 112 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 113 LKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 165 >gi|320008179|gb|ADW03029.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 268 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 25/288 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T +LR P +A G+ ++D + R K+L Sbjct: 1 MPEGDTVFQTAKRLDSALAGGVLTV-----SDLR--VPRFATADLTGRTVLDATARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + P H + T YR+ Sbjct: 54 LTRFEGGLTLHSHLRMEGAWRVFDHG-ERWRGGPDHQIRAVLATAEHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++L+ T + Q + L + + +ALL+Q+ +AG+ Sbjct: 107 --PVLELLRTEDEEQVVGHLG-PDLLGPDWDPETALRNLLADPGRRVGDALLDQRNLAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y+CE + A+ +P L L + K L+DA Sbjct: 164 GNVYMCELCFMARATPWLPVGELSLP-------LATRLVSTAKQLLDANRDRPVRTTTAA 216 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S + VYG+ G PCL C IR+ V+ R T++C CQ Sbjct: 217 TPAMSRRLPRERLFVYGRVGRPCL-RCRTPIRKTVRDDRPTYWCPRCQ 263 >gi|41407426|ref|NP_960262.1| hypothetical protein MAP1328c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395778|gb|AAS03645.1| hypothetical protein MAP_1328c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 262 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 107/289 (37%), Gaps = 30/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ ++++H GM+G A+ H + +SL + Y D Sbjct: 61 LVL-PTDGPTLLIHSGMTGRPYYCADGAAEDR----HQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L + R + + LK+AL++Q ++AG Sbjct: 110 RKLRGVWLADDPDDLVPITGRQGPDALGLGLRDFRDALTARSARRRQLKSALMDQSVLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ V E WRA++ P R L + + L + + +VL A+ Sbjct: 170 LGNLLVDEICWRARIRPTRAVADLDDDE------VKALHRAMTQVLRTAV---------- 213 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + + +P CG + GR+T +C CQ Sbjct: 214 --RHGRVPGLPRWLTGARDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|326383692|ref|ZP_08205377.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326197456|gb|EGD54645.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 294 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 110/295 (37%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I L + + + + + ++A G+ + V R KYL Sbjct: 1 MPELPEVTAIATFLDSRAAGLPIRRVDVASLAVLKTADPPYTA-LAGRIVSAVDRIGKYL 59 Query: 61 LIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +I + +++HL +G P K + + + + + Sbjct: 60 VIRTAPGAGEADVEIDLVIHLSRAGWVRWSDALSQTPPKPGGKGPIALRVHCGLPGEGFD 119 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V ++ +V + + + + +KN + + Sbjct: 120 VTEAGTQKRLAAWIVRDTAEIERISSLGPDVLGLSRDEFG----AILAGSTARIKNLITD 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++++G+GN Y E L A+LSP ++S+ + + L + + VL+ AI+ Sbjct: 176 QRVISGVGNAYSDEILHTARLSPFATSKSISDD------HVDDLYEATRSVLLGAIERLE 229 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+ +TG PC CG +R + A RS YC CQ Sbjct: 230 GQEVARLKSEKRTG-----LRVHARTGMPC-PVCGDTVREVSFADRSFQYCPTCQ 278 >gi|121708175|ref|XP_001272051.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] gi|119400199|gb|EAW10625.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] Length = 369 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 104/304 (34%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T+T + ++ + F A GK+++ ++ Sbjct: 1 MPELAEVSRIVHFLSEYVVGKTLTKVTTTNDDIVYGKAGTSASEFQKAMEGKRVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GMSG + K L K Sbjct: 61 GKYFWMIMSEPPHAVMHFGMSGWLKFDGVDTYYYRSDKHEDEEWPPKHWKFLLETDGEPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR + LV+ + P N +L + K + Sbjct: 121 TEAAFVDVRRLSRVHLVDCPAEDIRKYSPLKNHGPDPILDKNILTEEWLAKKIKSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I V Sbjct: 181 KVFLLDQANISGIGNWMGDEILYHAKIYPEQYSNTLTDEQ------IKQLYSSINYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN--CGQMIRRIVQAGRSTFYCT 285 A+ S + F+ + GK + S G+ I + GR++ Sbjct: 235 AVHLLADSEQFPKDW-----LFKYRW---GKGKKNHTSVLPNGEKIIFLTVGGRTSAVVP 286 Query: 286 YCQK 289 QK Sbjct: 287 SVQK 290 >gi|238061799|ref|ZP_04606508.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237883610|gb|EEP72438.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 286 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + + + AA G+ + D R K+L Sbjct: 1 MPELPEVEALAGYLRERAVSRRVDRVEVAAISALKTYDPA-PAAVSGRAVTDARRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV--TISLTNNTNTKKYRVIYND 118 + +G+L ++VHL +G + + P + + L + + ++ Sbjct: 60 DVVFDGDLHLVVHLARAGWLHYRESFPSAAPLRPGKGPIALRVRLDDGSG-------FDL 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 L + P + + + + +K L++Q ++A Sbjct: 113 TEAGTQKKLAAYLVADPATVPGVAKLGPDVLAADLPTFAARIRSRRGQVKGVLMDQAVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L A+LSP T L + + L + ++VL DA+ Sbjct: 173 GVGNAYSDEILHAARLSPFALTDRLTDDQ------VAALHESTRRVLGDALSRSLGH--- 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ +V+ + G PC CG +R + A S YC CQ Sbjct: 224 --RAAELKGEKRSGLAVHARAGLPC-PTCGDTVREVSFADSSLQYCPTCQ 270 >gi|108804620|ref|YP_644557.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108765863|gb|ABG04745.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 265 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 31/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE+++ L ++ + + + + A G+ + V R K Sbjct: 1 MPELPDVEVLKGRLERTSLGRRISRVEVRDGRVVGEVSARGLREALEGRSLRRVHRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +EG +++H GM+G + + P H + + R+ + D Sbjct: 61 LFAGVEGGGWVLMHFGMAGGL----SHLPGTEEEPPHVRLLLGFDGGD-----RLAFTDR 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + + +R G P + + + +K+ L+NQ +VAG Sbjct: 112 RALGRVHPIRDPE----SFVREKGLGPDALRVDYPSFRERLGGRRGAVKSVLMNQGVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+RA+L P L + + + +L + VL AI Sbjct: 168 LGNIYSDEVLFRARLHPRTGADRLGEED------IRRLFEATGGVLQTAI-------DRG 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F + G C IRR+ AGR+ +YC CQ Sbjct: 215 ADPEALPGSF---LLPRRREGARC-PRGNGEIRRLRIAGRTAYYCPACQ 259 >gi|225559783|gb|EEH08065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 383 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 112/308 (36%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRTYLVGKTITRVHAQDDPIVFGKAGTSAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 ++N++ + DPRR + LV+ P + +L + Sbjct: 121 SSNSEA---AFVDPRRLARVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ + + +L I Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQ------IEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S + F++ + GK G I I GR++ Sbjct: 232 NYVCSMSVDLLGDSEKFPADW-----LFKHRWGK-GKQNRSQKLPNGDKIVFITVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|145597000|ref|YP_001161297.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] gi|145306337|gb|ABP56919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] Length = 286 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 108/290 (37%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + N + +AA G+ ++ R K+L Sbjct: 1 MPELPEVEALTVYLRQRAVGRRVDRLEISAINALKTYDPAITAA-AGQPVVHAQRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV--TISLTNNTNTKKYRVIYND 118 + L +L ++VHL +G ++ P V L + + + Sbjct: 60 DLVLGADLHLVVHLARAGWLHFREEFSSRTPLRPGKGPVALRARLDDGSGFD-----LTE 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + + P + LGP+ + + + +K L +Q ++A Sbjct: 115 AGTQKSLAVYLVTDPATVPGVARLGPDALAV--DPATFADRLRSRKGQVKGVLTDQTVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L A+LSP T L L L + VL DA+ Sbjct: 173 GVGNAYSDEILHTARLSPFALTTRLTDEQ------LATLHAATRDVLGDAVSRSVG---- 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 223 -QRAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQYCPGCQ 270 >gi|295836191|ref|ZP_06823124.1| endonuclease VIII [Streptomyces sp. SPB74] gi|197695294|gb|EDY42227.1| endonuclease VIII [Streptomyces sp. SPB74] Length = 279 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 95/293 (32%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 17 MPEGDTVFHTARRLDAALSGRRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H + YR+ + Sbjct: 70 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAVLGNEARTAVGYRLPVVELL 128 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L L ALL+Q+ +AGI Sbjct: 129 R---------TADEDRAVGHLGPDLLGPDWDAGAALARLLAAPERPLGEALLDQRNLAGI 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +++P + P L Sbjct: 180 GNVYKSELCFLLRVTPWTPVGDVPGVERAPALAARLLHANRDTFRRV------------- 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + G VYG+ PCL CG +R Q R T++C CQ+ Sbjct: 227 ----TTGRRDTPLYVYGRARRPCL-RCGTPVREAEQGDGTRARPTYWCPGCQQ 274 >gi|326329312|ref|ZP_08195637.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] gi|325952887|gb|EGD44902.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +K+ +T + + + + + +A G + +V+R K++ Sbjct: 1 MPELPEVEALAEDLRGRLKDRAITKVHVAQFSALKTYDPPLTA-VEGTLVDNVTRHGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYND 118 IE G +++HL G A P + + + + L ++T + + Sbjct: 60 DIEASGI-HLVLHLARGGWIRWRDEVPATPPRPGSKSGLAIRVVLDDDTG-----LDITE 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 + L P + +LGP+P + F + +K L Q I+ Sbjct: 114 GGTKKRLALYVVHDPQDVPGVASLGPDPLADDFTLARFREILAGQGRKQIKGVLRMQSII 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E LW AK+SP + + + L ++ L +A++ Sbjct: 174 AGIGNAYSDEILWAAKMSPFKPA-EMTEEES------ESLYDALRTTLKEAVERDSGLAM 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ +V+GK G+ C CG I + A S YC CQ Sbjct: 227 SEL-----KGEKKSNLAVHGKAGKKC-PVCGSTILEVSFADSSLQYCPTCQ 271 >gi|288922013|ref|ZP_06416221.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] gi|288346629|gb|EFC80950.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] Length = 292 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 111/294 (37%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++TV + N F FS G ++ V R K+L Sbjct: 1 MPELPEVEALAAFLRETAADLTVARVEPVAVNALKTFDPPFST-LVGAALVAVQRHGKFL 59 Query: 61 LIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV--TISLTNNTNTKKYRVI 115 + +G +V ++ + P + + + T+ + Sbjct: 60 DLVFAAADGERLDLVTHLARAGWLQWKAKQPRTPARPGRSPLALRVVFTDGSGFD----- 114 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQ 174 + + + Q + LG +P F L + +K + +Q Sbjct: 115 LTEAGTQKRLAVYLVRDPAQVDGISRLGVDPLSPEFTRDVLAALLAESGRAQIKGVITDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN Y EALW A+LSP R +L + +L + VL DA DA Sbjct: 175 SKIAGVGNAYSDEALWVARLSPFRPAAALTTME------VDQLHAAVTGVLRDAADAARG 228 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +G V+G+TG PC C IR + + RS YC CQ Sbjct: 229 LAAADLKAEKKLG-----LKVHGQTGLPC-PRCADTIREVSFSDRSLQYCPTCQ 276 >gi|327295530|ref|XP_003232460.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] gi|326465632|gb|EGD91085.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] Length = 387 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 105/305 (34%), Gaps = 28/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVSRIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINYV 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++D G S F + ++ GK G G+ I + GR++ Sbjct: 235 CSVSVDLKGESSDFPTDW-----LFHHRWNK-GKKGAAGKLPSGEPIVFVTVGGRTSAVV 288 Query: 285 TYCQK 289 QK Sbjct: 289 PSVQK 293 >gi|254776704|ref|ZP_05218220.1| hypothetical protein MaviaA2_18836 [Mycobacterium avium subsp. avium ATCC 25291] Length = 250 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 94/289 (32%), Gaps = 39/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + ++ R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLLGETLTRCDIR-------VPRFATVDLTGQVVDEILSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + + + I L + T Sbjct: 54 FIRVGAAS-IHSHLKMEGSWRVGP-------RVRVDHRARIVLETGSAT-------AVGV 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + +++ + ++ A + + + ALL+Q+++AGI Sbjct: 99 DLGVLRILDRDRDGEAVAHLG-PDLLGEDWDPARAAANLVARPQRPIAEALLDQRVLAGI 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P ++ L + + D Sbjct: 158 GNVYCNELCFVSGQLPTAPVSAVADPRRLVSRARDMLWLNRFRWNRC-------TTGDTR 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G+PC CG I R T++C CQ+ Sbjct: 211 NG--------RQLWVYGRAGQPC-RRCGTPIEFDDSGDRVTYWCPSCQR 250 >gi|31789466|gb|AAP58579.1| putative fapy-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 103/288 (35%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + L + V I L L ++ G+ I + R K + Sbjct: 1 MPELPDILLYIHALGPRVIGRRVQRIRLVSPFLLRSVAPPLAS-VEGRTITALHRLGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E EG L ++ HL ++G F + P K + I + + ++ Sbjct: 60 VFEAEGELFLVFHLMIAGRFRWKPAGAPVPGKVG---LLAIDFEHGS-----LILTEAGT 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + V + P + + L + + +GI Sbjct: 112 KRQASLYVVSGADALDPHNPGGLEVMEAPLAVFASALRRENHTVKRA---LTDPHLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP R+T SL + +L + L D D Sbjct: 169 GNAYSDEILHAAKMSPFRQTSSLTDEE------IARLFHATRHTLALWTDRLREETAD-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ G+PC CG ++RIV A YC CQ Sbjct: 221 RFPEKVTAFREGMAVHGRYGKPC-PVCGTPVQRIVYAANEANYCVQCQ 267 >gi|332671950|ref|YP_004454958.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] gi|332340988|gb|AEE47571.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] Length = 308 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 108/321 (33%), Gaps = 45/321 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R L + + RF + G++++ V K L Sbjct: 1 MPEGHTVHRIARQLRRDFVGHRIA---VTSPQGRF---AAGAERLDGRELVGVEAVGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT--------------SCAKPIKNPQHNHVTISLTNN 106 +G + VHLG+ G++ + + + L Sbjct: 55 FATFDGGDVLRVHLGLYGAWDFHGVVSPIVDGQVAVGSMGAPRLRRAVRMGEGEHELRGG 114 Query: 107 TNTKKY--------RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY--- 155 + + RV + + + + + + Sbjct: 115 ADAPVFPPEPVGAVRVRLATTQSVADLRGPTACEVLDPVAAQAVVDRLGPDPASTDDLDA 174 Query: 156 ----LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + + + + L++Q +VAGIGNIY E L+RA+L P R P Sbjct: 175 AQEVVVQRVTSRTVAVGQLLMDQSVVAGIGNIYRAELLFRARLDPHTPGRR------VPP 228 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS---IGYFQNAFSVYGKTGEPCLSNCG 268 D++ L ++ +L D I G R+ + +G + + VYG+ G PC CG Sbjct: 229 DVVRALWRDWVVLLDDGIRVGAMITREDLDAEGRAQALADPRQRHWVYGRAGLPC-RVCG 287 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 + A R ++C CQ+ Sbjct: 288 TPVIVEEMATRKLYHCPVCQR 308 >gi|311744402|ref|ZP_07718203.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] gi|311312207|gb|EFQ82123.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] Length = 286 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEV+ + +L V I L ++ + G + DV R K++ Sbjct: 1 MPEMPEVDALVAHLRERCVGAVVAGIELGSFSVLKTVDPPLDSF-AGLSVTDVRRHGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++++G L ++ HL +G IK + + + Sbjct: 60 DLDVDG-LHLVFHLAKAGWLRWSDRFSPARIKMGNGPLALRVRLDTGDGPTAGFDLTEAG 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P + LGP+P + F+ L + + L +QKIVAGI Sbjct: 119 TRKGLAVYAVRDVAEVPGVAALGPDPLADGFDLRPLLARRMQVKR----LLRDQKIVAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP +D + L ++ VL A+ + Sbjct: 175 GNAYSDEILHAARLSPFAIA------ENLDEDQVAALAAAVRDVLSAAVSEAHGKPAAEL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D V+G+TG+PC CG + + + S YC CQ Sbjct: 229 KDDKRT-----RMRVHGRTGQPC-PVCGDTVAEVAFSDSSLQYCPTCQ 270 >gi|254775599|ref|ZP_05217115.1| hypothetical protein MaviaA2_13153 [Mycobacterium avium subsp. avium ATCC 25291] Length = 262 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 107/289 (37%), Gaps = 30/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ ++++H GM+G A+ H + +SL + Y D Sbjct: 61 LVL-PTDGPTLLIHSGMTGRPYYCADGAAEDR----HQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L + R + + LK+AL++Q ++AG Sbjct: 110 RKLRGVWLADDPDDLVPITGRQGPDALGLGLLDFRDALTARSARRRQLKSALMDQSVLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ V E WRA++ P R L + + L + + +VL A+ G Sbjct: 170 LGNLLVDEICWRARIRPTRAVADLDDDE------VKALHRAMTQVLRTAV-RHGRVPGLP 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ P CG + GR+T +C CQ Sbjct: 223 RWLTGARDAPN-----------PHCPRCGARLDHARVGGRTTLWCPRCQ 260 >gi|94968014|ref|YP_590062.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94550064|gb|ABF39988.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] Length = 299 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ L + T+ + + L A R K+++ + R K + Sbjct: 1 MPELPDITAYLTALEPRVLGKTLQRVRITSPFLLRTIDPPLEAVER-KRVLALRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LE +L +++HL ++G + A +N + + + + + Sbjct: 60 VFGLEDDLWLVLHLMIAGRLHWKAAGVALKGRN---YLAALDFDDGS----LVLTEAGAK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + L + + + +N LK AL + + ++GI Sbjct: 113 RRASLHLFRGEAALRTVDPGG----IDVFTADLDAFRAALTIENRTLKRALTDPRFLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A+LSPI +T L + +L + L ID + Sbjct: 169 GNAYSDEILWAAQLSPIAQTHKLKSDEW------QRLYDATRATLQTWIDR--FAAEAAK 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK GEPC CG+ + RI A T YC CQ Sbjct: 221 KFPEKVTAFRPEMAVHGKYGEPC-PRCGEKVLRIRYADNETNYCARCQ 267 >gi|34015259|gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group] gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza sativa Japonica Group] Length = 405 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 105/299 (35%), Gaps = 42/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLL-------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L ++ + + + H C + + S T+ K Sbjct: 61 NLWLALDSPPFPSFQFGFLLYRMPIRNGWSYLHQGCGTEQIQKMDDGLEFSFTDKRRFAK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 R + PP+ LGP+ + +K + +K L Sbjct: 121 IRFL---------------DNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q ++GIGN E L++A++ P++ K+ L Q I +V+ +++ Sbjct: 166 LDQSFISGIGNWIADEVLYQARIHPMQTAS------MISKEKCKALHQCIIEVIEKSLEV 219 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 G +S + + + + + +P + G+ I I GR++ Y QK Sbjct: 220 GCNSSQ-----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQK 267 >gi|300866461|ref|ZP_07111152.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300335505|emb|CBN56312.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 200 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 18/216 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK-- 133 M+G + H H V + + + D R FG M V + + Sbjct: 1 MTGQLLWVHRDDPLQK----HTRVRLFFAEGR-----ELRFVDQRTFGQMWWVPPTTEVS 51 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 L+ LGPEP F YL + H ++ ++K ALL+Q ++AG+GNIY EAL+ + Sbjct: 52 SAIAGLKKLGPEPFSEEFTVEYLAAKLHHRSRSVKTALLDQALIAGLGNIYADEALFLSG 111 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + L + +L I +VL +A++AGG++ ++++++G G + Sbjct: 112 VRSQTSCSDLTNEQ------IQRLHSAIIQVLENALNAGGTTFSNFLNVNGVNGNYGGIA 165 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G+PC CG I R+ AGRS+ +C CQ+ Sbjct: 166 WVYNRAGQPC-RVCGTPIERLKLAGRSSHFCPQCQR 200 >gi|326484609|gb|EGE08619.1| formamidopyrimidine-DNA glycosylase [Trichophyton equinum CBS 127.97] Length = 388 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 105/305 (34%), Gaps = 28/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINYV 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++D G S F + ++ GK G G+ I + GR++ Sbjct: 235 CSVSVDLKGESSDFPTDW-----LFHHRWNK-GKKGATGKLPSGEPIVFVTVGGRTSAVV 288 Query: 285 TYCQK 289 QK Sbjct: 289 PSVQK 293 >gi|326475689|gb|EGD99698.1| formamidopyrimidine-DNA glycosylase [Trichophyton tonsurans CBS 112818] Length = 388 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 105/305 (34%), Gaps = 28/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINYV 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++D G S F + ++ GK G G+ I + GR++ Sbjct: 235 CSVSVDLKGESSDFPTDW-----LFHHRWNK-GKKGATGKLPSGEPIVFVTVGGRTSAVV 288 Query: 285 TYCQK 289 QK Sbjct: 289 PSVQK 293 >gi|270263766|ref|ZP_06192035.1| endonuclease VIII [Serratia odorifera 4Rx13] gi|270042650|gb|EFA15745.1| endonuclease VIII [Serratia odorifera 4Rx13] Length = 263 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T++ L H+ G++II + R K L Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVGFAFPQL-----KHYRDRLIGERIIAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + K + + L ++ ++Y+ Sbjct: 56 LTHFSNGLTMYSHNQLYGVWKVAKAGESPDTKR----DLRVRLE---TAQQAILLYSASE 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L Q+P L+ +GP+ D S + + + L LL+Q ++ Sbjct: 109 ----ITLGPREEIEQHPFLQRIGPDVLDMSLTVTMVAQRLLSPAFRRRQLGGMLLDQGVL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P + + L+ L +L Q + V + G Sbjct: 165 AGLGNYLRAEILWQAELAPQHRPQDLMPE------TLQRLAQALLAVPRLSYQTRGQ--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 216 --VDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIVRTQLSSRPFYWCPGCQK 263 >gi|41409514|ref|NP_962350.1| hypothetical protein MAP3416 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398345|gb|AAS05966.1| Nei [Mycobacterium avium subsp. paratuberculosis K-10] Length = 250 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 93/289 (32%), Gaps = 39/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + ++ R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLLGETLTRCDIR-------VPRFATVDLTGQVVDEILSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + + + I L T Sbjct: 54 FIRVGAAS-IHSHLKMEGSWRVGP-------RVRVDHRARIVLETGAAT-------AVGV 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + +++ + ++ A + + + ALL+Q+++AGI Sbjct: 99 DLGVLQILDRDRDGEAVAHLG-PDLLGEDWDPARAAANLAARPQRPIAEALLDQRVLAGI 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P ++ L + + D Sbjct: 158 GNVYCNELCFVSGHLPTTPVSAVADPRRLVSRARDMLWLNRFRWNRC-------TTGDTR 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G+PC CG I R T++C CQ+ Sbjct: 211 NG--------RQLWVYGRAGQPC-RRCGTPIEFDDSGDRVTYWCPSCQR 250 >gi|314919237|gb|EFS83068.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] Length = 256 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFPRVLDAYGRENEPLPP 255 >gi|85710813|ref|ZP_01041874.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] gi|85695217|gb|EAQ33154.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] Length = 197 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 17/214 (7%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSG + + H+H+ I T + NDPRRFG + ET+ Sbjct: 1 MSGKLRVVPIETPRVK----HDHIEIEFTTGQC-----LRLNDPRRFGALLFTETNADE- 50 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L LGPEP + FNA YL + K +K +++ V G+GNIY EAL++A + Sbjct: 51 HKLLAMLGPEPLTDEFNADYLFERSRNKKQPIKTFIMDNHQVVGVGNIYANEALFKAGIH 110 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R ++ K +L++ I++ L +AI GG++LRD+ +DGS GYF V Sbjct: 111 PKRAAGAIS------KVRYERLVKHIKETLAEAIRQGGTTLRDFTRVDGSPGYFAQKLQV 164 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ G+ C+ C + +R I RST YCT CQ+ Sbjct: 165 YGRGGKMCM-VCKKPLREIRLGQRSTVYCTQCQR 197 >gi|307329212|ref|ZP_07608377.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885111|gb|EFN16132.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 107/292 (36%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T R +LR P +A G+++++V R K+L Sbjct: 30 MPEGDTVWQTAQRLHQALAGPPLT-----RSDLR--VPRLATADLTGRRVLEVVPRGKHL 82 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + + H+ + L +T Sbjct: 83 LTRVEGGLTLHSHLRMDGSWQVYGPG--ERWRGGPHHQIRAILATAAHT-------AVGY 133 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++L+ T + + + L + L ALL+Q+ +AGI Sbjct: 134 RLPVLELLRTGDEDKVVGHLG-PDLLGPDWDPDEALRRLLADPSRPLGEALLDQRNLAGI 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + ++SP + L + Sbjct: 193 GNVYKSELCFVLRVSPWLPIGEVSSPERLVAHAKKLLEANRNRRAR-------------- 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + + VYG+ G PCL CG +R Q RSTF+C CQ Sbjct: 239 -VTTAEPRPDRRLWVYGRPGRPCL-RCGTPVRAADQGRAGQERSTFWCPSCQ 288 >gi|302845178|ref|XP_002954128.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] gi|300260627|gb|EFJ44845.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] Length = 325 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 113/302 (37%), Gaps = 30/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R + + + + + F+ P A G++++ R+ K Sbjct: 1 MPELPEVEAAKRLMERGCVGKRIERVVAAKDDKVFEDASPDDVRRALEGRRVVAAHRKGK 60 Query: 59 YLL--IELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-----NPQHNHVTISLTNNTNTKK 111 YL ++ L ++H GM+G ++++ K + NP + Sbjct: 61 YLWLELDNPDGLWPLLHFGMTGGIVVQNMGATKYKRIHLASNPDEWPPRFTKLELDLEGG 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTL---GPEPADNSFNAIYLTHQFHKKNSNLK 168 +V + D RRFG + L+ + P F A +K Sbjct: 121 AKVAFVDVRRFGRVKLLANPSAQEPLSKLGFDVLDELPPLEQFIAAVRKRVARAPGLKIK 180 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q+ +GIGN E L++A++ P + SL + L L + I+ V+ A Sbjct: 181 ALLLDQEFCSGIGNWVGDEVLYQARIHPEQSAASLGDS------ALAALRESIRSVVTQA 234 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG-EPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + ++ + F + + + S G I + R++ + Sbjct: 235 V-----------ELEADVDRFPPEWLFHHRWNSRKPGSINGHKIEFVTVGSRTSAFVPAL 283 Query: 288 QK 289 QK Sbjct: 284 QK 285 >gi|297518691|ref|ZP_06937077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 137 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 7/141 (4%) Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 + FN YL + KK + +K L++ K+V G+GNIY E+L+ A + P R SL Sbjct: 4 DDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAE- 62 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L + I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG Sbjct: 63 -----CELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCG 116 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 I A R+TFYC CQK Sbjct: 117 TPIVATKHAQRATFYCRQCQK 137 >gi|118466096|ref|YP_882333.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium avium 104] gi|118167383|gb|ABK68280.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Mycobacterium avium 104] Length = 262 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 106/289 (36%), Gaps = 30/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ ++++H GM+G A+ + + +SL + Y D Sbjct: 61 LVL-PTDGPTLLIHSGMTGRPYYCADGAAEDR----YQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L + R + + LK+AL+ Q ++AG Sbjct: 110 RKLRGVWLADDPDDLVPITGRQGPDSLGLGLRDFRDALTARSARRRQLKSALMEQSVLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ V E WRA++ P R L + + L + + +VL A+ Sbjct: 170 LGNLLVDEICWRARIRPTRAVADLDDDE------VKALHRAMTQVLRTAV---------- 213 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + + +P CG + GR+T +C CQ Sbjct: 214 --RHGRVPGLPRWLTGARDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|256841344|ref|ZP_05546851.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] gi|256737187|gb|EEU50514.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] Length = 275 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 113/295 (38%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P + KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKAYFISLIRNLKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTCRGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ+ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---DPC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|326499279|dbj|BAK06130.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 375 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 104/295 (35%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEAARLALEEHCVGKRILRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRV 114 L + L+ GM+G+ I+ +K + + S Sbjct: 61 NLWLVLDSPPYPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ PP+ LGP+ F +KN+ +K+ LL+Q Sbjct: 121 SFTDKRRFAKIRLL--DNPEAVPPISELGPDALCEPMQLDEFVQSFGRKNAPIKSLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ + + + K Sbjct: 179 SFMSGIGNWMADEVLYQARIHPMQTSSKISKEKCKALHRCIK-----------------E 221 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + V + F + + + +P + G+ I + GR++ Y Q Sbjct: 222 VIEKSVEVGADSNEFPENWIFHSREKKPGKAFVDGKKIDFVTVGGRTSAYVPELQ 276 >gi|238486134|ref|XP_002374305.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] gi|220699184|gb|EED55523.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] Length = 369 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 110/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + P ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L + + +L + V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQ------VKELHSALHYVCSI 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + F+ +S K P L N G I + GR++ Sbjct: 235 SVDLLADSEKFPEDW-----LFKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|169771323|ref|XP_001820131.1| formamidopyrimidine-DNA glycosylase [Aspergillus oryzae RIB40] gi|83767990|dbj|BAE58129.1| unnamed protein product [Aspergillus oryzae] Length = 369 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 110/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + P ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L + + +L + V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQ------VKELHSALHYVCSI 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + F+ +S K P L N G I + GR++ Sbjct: 235 SVDLLADSEKFPEDW-----LFKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|262383499|ref|ZP_06076635.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] gi|262294397|gb|EEY82329.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] Length = 275 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 111/295 (37%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQARETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P + KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKAYFISLIRNLKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + +L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEEDTD------RLFNTVKSTLKEMTRQGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y PC CG+ I++ G S +YC +CQ+ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---APC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|83644837|ref|YP_433272.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|83632880|gb|ABC28847.1| Formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 302 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 101/292 (34%), Gaps = 29/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P++ + L + + + LH L A G K+ + R K + Sbjct: 1 MPEYPDITVYIDALERRVLGRVLESVELHSYFLLRTAEPSL-EAVVGAKVTQLRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----QHNHVTISLTNNTNTKKYRVIY 116 I + ++ ++ HL ++G P KN Q + + LT K+ + Sbjct: 60 AIGFDNDVWMVFHLMIAGRLHWRDAGKKTPGKNALISLQFPNGVLFLTEAGTKKRASLHL 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R + + N LK AL + I Sbjct: 120 VSGERGLAQINPGGLEILEADLPA---------------FQQALTRNNHTLKRALTDPHI 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +G+GN Y E L A+LSPI +T+ L + +L Q + L Sbjct: 165 FSGVGNAYSDEILHAARLSPIAQTQKLNAEE------IERLYQACRSCLTTWTQRLRDQY 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D + F+ +V+G+ PC CG ++RI A T YC CQ Sbjct: 219 GDAF--PEKVTAFREDMAVHGRYNLPC-PVCGGAVQRIRYATNETNYCPDCQ 267 >gi|302523189|ref|ZP_07275531.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302432084|gb|EFL03900.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 278 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 21/281 (7%) Query: 10 IRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL 68 +R L + T + + L+ P +A G ++ DV R K+L + +G Sbjct: 1 MRDFLDDHLVGRIPTRVLPVAVNVLKTYDPP--PSALVGHEVTDVRRYGKFLDVVTDGGP 58 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 ++ HL +G + P K + + + L + + + + + Sbjct: 59 HLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSGFD-----LTEAGTQKRLAV 113 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 P + LGP+P F+ + LK AL +Q +VAG+GN Y E Sbjct: 114 YVVDDPRTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVAGVGNAYSDE 173 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L AKLSP + L + + +L + ++ L +A+ + + G Sbjct: 174 ILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAGSLKAEKKSG 227 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+G+TGEPC CG IR + A S YC CQ Sbjct: 228 -----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 262 >gi|329939941|ref|ZP_08289223.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329300767|gb|EGG44663.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 275 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P ++ G ++DV+ R K+L Sbjct: 1 MPEGDTVHQAAARLHTALAGRRLTRFDLR-------VPRFATSDLTGHTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG ++ HL M G++ + + P H I T YR+ + Sbjct: 54 LTRIEGGYTLHSHLRMDGAWKLYAPG-KRWTGGPAHQIRAILGTEERTAVGYRLPVLELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + + L + + L ALL+Q+ +AGI Sbjct: 113 R---------TEEESRAVGHLGPDLLGPDWDPDTALANLLREPTRPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + + +P L + L + + E + Sbjct: 164 GNVFKSELCFLLRATPWLPLGELPPGHLAALPALARKVLEANRE---------------R 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + G + VYG+ G PCL CG IR Q R T++C CQ Sbjct: 209 PVRNTTGRREQPLFVYGRAGRPCL-RCGTRIRLADQGDGSRERPTYWCPVCQ 259 >gi|289426426|ref|ZP_06428169.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|289153154|gb|EFD01872.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|313763648|gb|EFS35012.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313794041|gb|EFS42065.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801429|gb|EFS42680.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313816826|gb|EFS54540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829555|gb|EFS67269.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313839851|gb|EFS77565.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914650|gb|EFS78481.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314920853|gb|EFS84684.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930531|gb|EFS94362.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954309|gb|EFS98715.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957412|gb|EFT01515.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314963604|gb|EFT07704.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA1] gi|314968564|gb|EFT12662.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA1] gi|315079458|gb|EFT51451.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315099275|gb|EFT71251.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100491|gb|EFT72467.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315109075|gb|EFT81051.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327451939|gb|EGE98593.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327455026|gb|EGF01681.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457686|gb|EGF04341.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755142|gb|EGF68758.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758080|gb|EGF71696.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] Length = 256 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPLPP 255 >gi|298376079|ref|ZP_06986035.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] gi|298267116|gb|EFI08773.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] Length = 275 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 112/295 (37%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P + KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKAYFISLIRNLKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + + L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEED------IDSLFNTVKSTLEEMTCRGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ+ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQR 273 >gi|643609|gb|AAA61988.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 181 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 13/194 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAWLWTK--ELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKL 194 GNIY E+L+ A + Sbjct: 168 GNIYASESLFAAGI 181 >gi|238920756|ref|YP_002934271.1| endonuclease VIII [Edwardsiella ictaluri 93-146] gi|238870324|gb|ACR70035.1| endonuclease VIII [Edwardsiella ictaluri 93-146] Length = 291 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + T+T + +L+ +A G ++ + R K L Sbjct: 1 MPEGPEIRRVADELRAAVGGGTLTQVWFGVPSLQRH-----AAGLVGCRVTTIEARGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + T P + + L ++ ++Y+ Sbjct: 56 LIHFSNGVSMYSHNQLYGIWRVAATGQI----PPTSRSLRVRLE---TAERAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + + + L LL+Q+ + Sbjct: 109 ----IQLAPRAQILRHPFLLRIGPDVLDPALTEVQVRERLCSPAFRRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ +L P R+ L T + + V I Sbjct: 165 AGLGNYLRVEILWQVELPPQRRATDLTPAQLTSLCHALLAVPRLSYVTRGQI-------- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G++ F V+ + GE C CG + R A R + C CQ Sbjct: 217 DTGRHHGTL----FRFRVFQREGESC-ERCGTTLIRAQVASRPFYGCPGCQ 262 >gi|284040426|ref|YP_003390356.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] gi|283819719|gb|ADB41557.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] Length = 271 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 107/289 (37%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R+ L V+ I + K L A G++ R K L Sbjct: 1 MPELPEVEIRRQYLETSSLYQPVSHIEVEDKKLLTTDLATLQQALIGRQFTGTRRVGKNL 60 Query: 61 LIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 I + I +H GM+G H S + P+ + T+ + + + P Sbjct: 61 FIFTDAPDVIIHMHFGMTGDLEYYHASLDR----PRFARIVFEFTSG-----FNLGFLCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F + LV L + L+ + +K + +K LL+Q +VAG Sbjct: 112 RKFERVGLVTDVDA----FLLRKKIGEDGLDISLETLSDRVRRKKAFIKPVLLDQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN V E L++A + P ++ +L + I +L+ E + Sbjct: 168 LGNWIVDEVLFQALIHPEQRADTLTNDQMASLHIAIRLVLETAIRYEATYRDFPIGFLIH 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V Y Y C I R V GR+TF+C Q Sbjct: 228 VREWDDSPYDDVEAHKY-------CPRCKTRIERSVVGGRTTFFCPKEQ 269 >gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 385 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 111/308 (36%), Gaps = 31/308 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ P ++ + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 + K + D RR G + LV+ P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + + +L ++ + +L I Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQ------IEQLYSAI 234 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++ G+S + F + +S GK G+ I I GR++ Sbjct: 235 NYVCSTSVGLLGNSEEFPSNW-----LFSHRWSK-GKANHSHQLPNGEKIVFITVGGRTS 288 Query: 282 FYCTYCQK 289 QK Sbjct: 289 AIVPAIQK 296 >gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] Length = 362 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 106/302 (35%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ ++ + F A +G K+I ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-----NPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + L K Sbjct: 61 GKYFWITMSKPPHVVMHFGMTGWMKIRNADTYYYRTTNADDKEWPPKYWKFLLETDENPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + DPRR + LV+ P + +L + K + Sbjct: 121 TEAAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKRVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ +K+ P + + +L + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQ------IKQLHTSIDYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++ S + F++ + GK +P + G I + GR++ Sbjct: 235 SVGVLADSEQFP-----EEWLFKHRWGK-GKKNQPSVLPNGNKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|260578983|ref|ZP_05846885.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] gi|258602848|gb|EEW16123.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] Length = 216 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 12/223 (5%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQH----NHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 +HLGMSG ++ + + + + ++R+ P + Sbjct: 1 MHLGMSGQMLVAEPGQVQSPHVRIRAGLSDGRELCFVDQRTFGEWRLEKAVPDPWAVGAG 60 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 V + + + + +P + +F+A + K + +K LLNQ++V+GIGNIY E Sbjct: 61 VASPKNFLPQNVSHISADPLEPAFDAQAAVERMKSKRAAVKMVLLNQEVVSGIGNIYADE 120 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSI 246 AL+ A + P R + L++++Q +V+ A++ GG+S YV+++G+ Sbjct: 121 ALFLAGVRPRRSAA------LLSRPTLHRVLQSAAEVMERALEQGGTSFDSLYVNVNGAS 174 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GYF + +VYG+ GE C CG I+R+V GRST YC CQK Sbjct: 175 GYFSRSLNVYGRGGEAC-KRCGAPIKRVVVGGRSTHYCATCQK 216 >gi|317123306|ref|YP_004097418.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315587394|gb|ADU46691.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 286 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + VT + L + F + G I V R K+L Sbjct: 1 MPELPEVQALVDFLAERTAGLAVTKVELASISALKTFNPP-PQSLEGAPIDGVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 I+ ++ HL +G ++ + + + L++ + + + Sbjct: 60 DID-CDGTHLVFHLARAGWLRWSDQLPTTVLRPGKSPIALRVRLSDGSG---FDLTEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ +V + P + LGP+P + F + + +K L +Q+++AG Sbjct: 116 KKSLAAYIVR--DPKEVPGVARLGPDPLADDFTLERFRELLTGRRTQIKGLLRDQEVIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AK+SP S P D++ +L +++ L A+ A Sbjct: 174 VGNAYSDEILHVAKVSPFAIAGS------LPPDVVDRLYAALRETLSSAVHAASGKPAKE 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+ +TG+ C CG ++R + A S YC CQ Sbjct: 228 LKDAKRAG-----MRVHARTGQAC-PECGDVVREVSFADTSLQYCATCQ 270 >gi|163793016|ref|ZP_02186992.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] gi|159181662|gb|EDP66174.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] Length = 300 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I L + +T + + L +A G ++ + R K + Sbjct: 1 MPELPDIAIYLEALERRILGAEITGLRIASPFLVRSVDPPIKSA-VGHRVESLRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+G L +++HL ++G P K +L +T T + + R Sbjct: 60 VIGLDGELFLVLHLMIAGRLQWAGAGAPLPGKKGL-----AALDFDTGTLILTEMGSKKR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +L P D +N LK AL + + +GI Sbjct: 115 ASLHLVCGAAALDEHDPGGVEPLEVDRD------GFAAALQAENHTLKRALTDPHLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSPI ++ L ++ + +L + + L+ I+ G + + D Sbjct: 169 GNAYSDEILHAAKLSPIALSQRLNEDE------ITRLFEATRSTLLAWIERGRTEVGD-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ A + +GK G+PC C I+RIV A T YC CQ Sbjct: 221 RWPTKVSAFRAAMAAHGKYGKPC-PVCATPIQRIVHAANETNYCPRCQ 267 >gi|240276344|gb|EER39856.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H143] gi|325089797|gb|EGC43107.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H88] Length = 383 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 114/308 (37%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICSNLVGKTITKVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 ++N++ + DPRRFG + LV+ P + +L + Sbjct: 121 SSNSEA---AFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLT 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ + + +L I Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQ------IEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + ++D G S + F++ + GK G I I GR++ Sbjct: 232 NYICSMSVDLLGDSEKFPADW-----LFKHRWGK-GKQNRSQNLPNGDKIVFITVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|239994890|ref|ZP_04715414.1| endonuclease VIII [Alteromonas macleodii ATCC 27126] Length = 273 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K++ + + L ++ G+K++ + R K L Sbjct: 1 MPEGPEIRRAADKVEAVIKDIPLEKVEFGLAQL-----KPYAKQLEGEKVLRMETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LS+ H + G + +C + + + L T++ Sbjct: 56 ITHFSNGLSMYSHNQLYGVWH----TCKRNRMPDTTRQLRVGLHTETHSAIL-------Y 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + + T +++P L+ +GP+ +NS + + N L L+Q+ + Sbjct: 105 SASDISIWPTQTIHEHPFLQRVGPDVLNNSVTEELVLERLRSKAFYNRALSGLYLDQRFM 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A + P K L L L + + + GG ++ Sbjct: 165 AGLGNYLRSEILFAAGVHPSLKPSQLADEQ------LRSLAHHTLTICKRSYETGGYTVY 218 Query: 238 DYVHI--DGSIGYFQN-AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F+ F V+ + +PC C I+R GR ++C+ CQ Sbjct: 219 TELREVLEAKGVNFEGTRFMVFDREEQPC-RICATPIKRQTYNGRRFYWCSRCQ 271 >gi|126642855|ref|YP_001085839.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 208 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 115/219 (52%), Gaps = 19/219 (8%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++ HLGMSGSF + + + +H+H+ I + + Y+DPRRFG + + Sbjct: 1 MLWHLGMSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPRRFGCILWLN 50 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + Q + TLGPEP F+A YL + K+ +K AL++ +V G+GNIY E+L Sbjct: 51 P--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESL 108 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 + + P + L + KL+ EI+++L AID GGS+LRDY + G GYF Sbjct: 109 FNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYF 162 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 QQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 200 >gi|168705276|ref|ZP_02737553.1| formamidopyrimidine-DNA glycosylase [Gemmata obscuriglobus UQM 2246] Length = 214 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 99/213 (46%), Gaps = 18/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F + + P H H +L N + + + D RRFG + + + Sbjct: 1 MTGQFTVVPADAPE----PDHLHAVFALDNG-----HELRFRDQRRFGSAEFF--ADRAA 49 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 P + +A Y NLK LL+Q +VAG+GNIY EA +RAKL Sbjct: 50 VESEMNAELGPEPFNIDADYFRAAVSGTGRNLKAVLLDQTVVAGVGNIYADEACFRAKLH 109 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R L L + ++ VL AI++ GS++RDYV G G FQN F+V Sbjct: 110 PGRPGNKLTAGE------CDALREAVEAVLTRAIESRGSTIRDYVGGSGLRGGFQNEFAV 163 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+TGEPC C + AGR++ +C CQ Sbjct: 164 YGRTGEPC-PTCAAAVVCARYAGRASHFCPRCQ 195 >gi|158333840|ref|YP_001515012.1| endonuclease VIII [Acaryochloris marina MBIC11017] gi|158304081|gb|ABW25698.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) [Acaryochloris marina MBIC11017] Length = 273 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 106/294 (36%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + N + ++ +L+ + A +I V R K L Sbjct: 1 MPEGPEIRRAADRIASEIANQPLQEVWFAFSHLKI-----YEAQLGASQIQQVETRGKGL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + LSI H + G ++I K + +K ++Y+ Sbjct: 56 LMHFDCGLSIYSHNQLYGKWMIRKAYNYPQTKRQLRLALHC-------DRKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 +D+++ + +P L +GP+ + + + L LL+Q + Sbjct: 109 ----IDVLDAAGIQAHPFLSRIGPDVLSSETTVEQVRERLSCDRFRRRRLTTLLLDQHFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A++ P + + KL + + + + GG + Sbjct: 165 AGLGNYLRSEILFVARVHPSLRPADCTDEQ------IEKLAEAALALPRQSYETGGITND 218 Query: 238 DYVHIDGSIGYFQNA---FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + G+ C C I + Q GR +YC CQ Sbjct: 219 IAWAAKLKFQGFARRVYRHWVFARAGQLCW-VCATPIVKDAQGGRRYYYCPQCQ 271 >gi|242768773|ref|XP_002341637.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] gi|218724833|gb|EED24250.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] Length = 359 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 105/302 (34%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ + ++ + F A +G KI ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGRTLANVQVQNDDIVYGKAGTTAAEFQKAMQGNKITGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-----NPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + L T K Sbjct: 61 GKYFWITMAKPPHVVMHFGMTGWLKIRNADTYYYRTTNADDKEWPPKYWKFLLETDETPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + DPRR + LV+ P + +L + K + Sbjct: 121 TEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ +K+ P + + +L + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTNEQ------IQQLHNSIDYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++ S + F++ + GK + G I + GR++ Sbjct: 235 SVRVLADSEQFPEDW-----LFKHRWGK-GKKNQSSALPNGNKIVFLTVGGRTSAVVPAV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|154287302|ref|XP_001544446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408087|gb|EDN03628.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 383 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 113/308 (36%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICTNLVGKTITQVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + + + P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEESVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 ++N++ + DPRRFG + LV+ P + +L + Sbjct: 121 SSNSEA---AFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ + + +L I Sbjct: 178 SKKVPMKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQ------IEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S + F++ + GK G I I GR++ Sbjct: 232 NYVCSMSVDLLGDSEKFPADW-----LFKHRWGK-GKQNRSQKLPNGDKIVFITVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 363 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 107/302 (35%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F A GKK++ ++ Sbjct: 1 MPELAEVFRIVHFIRQHLVGKTLTKVSAQEDPIIYGKVGTSAAEFQKAMEGKKVVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHPVMHFGMAGWLKIRDADTYYYRTDKPEDKEWPPKYWKFLLETDGEPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ P + +L ++ K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPADDIRNHTPLKENGPDPVVDKDIVTETWLANKLRSKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQ------IKELNSAIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ +S GK G I I GR++ Sbjct: 235 SVDLLADSEKFPEHW-----LFKHRWSK-GKKNVASALPNGDKITFITVGGRTSAVVPNV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|294815478|ref|ZP_06774121.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443828|ref|ZP_08218562.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] gi|294328077|gb|EFG09720.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 112/292 (38%), Gaps = 34/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P + +A G+++++V R K+L Sbjct: 1 MPEGDTVWRTAKRLDTALAGRELTRSELR-------VPRYATADLTGRRVLEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + +++T Sbjct: 54 LARFEGGLTLHSHLRMDGAWRVFPAGERPRGGPEHQIRAVLGTSSHTA---------VGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++L+ T+ + + + A + L ALL+Q+ +AGI Sbjct: 105 RLPVLELLRTTDEQKVVGHLG-PDLLGPDWDPAAARERLLADPSRPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + A ++P P+ +L +L+ ++ ++ ++ Sbjct: 164 GNVYKCELAFLAGVTPWLPVGE------LPEGVLERLLATAHRL----LEENRDAVERRT 213 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 GS + V+G+ G PC CG +RR R +++C CQ Sbjct: 214 TAAGS--RAGSRLHVHGRAGRPC-PRCGTPVRRSGPGRAGDERISYWCPGCQ 262 >gi|301309603|ref|ZP_07215545.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] gi|300832692|gb|EFK63320.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] Length = 277 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 112/294 (38%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P + KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKAYFISLIRNLKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|312200446|ref|YP_004020507.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311231782|gb|ADP84637.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 270 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + G+ + K+LL+ Sbjct: 1 MPEGHTVHRLAAAHAEMFRGRPVAVTSPQGRF---ADGARRLTGRVLESAEAYGKHLLLR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ G + + P V + L ++ Y D R Sbjct: 58 FDGEQVLHVHLGIYGKYTLAPGPAPTPTGA-----VRLRLASDGG-------YADLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+E L LGP+P ++ + + + + L++Q +VAG GNI Sbjct: 106 ACELLEPGDVKT--LLDRLGPDPLRPDADSELAWRRISRSRTVIAQLLMDQAVVAGPGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA + P + L + L ++ ++ + + G H Sbjct: 164 YRAEVLFRAGIDPRLSGKDLAASQW------AALWADLGVLMAEGVRTGRIDTVRPQHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY +TG+PCL C + AGR+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRTGQPCL-ICENPVLTTELAGRNLFWCPVCQ 267 >gi|229821354|ref|YP_002882880.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] gi|229567267|gb|ACQ81118.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] Length = 302 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 33/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + + + + + F + G+ + V R K+L Sbjct: 4 MPELPEVDALGEFLRERVVGREIVAVHIAQIGALKTFDPPLTD-LVGRTVTGVERHGKWL 62 Query: 61 LIE-------LEGNLSIIVHLGMSGSFIIEHTSCA-------KPIKNPQHNHVTISLTNN 106 + +G ++ HL +G + + + + L + Sbjct: 63 DLALGRRGDADDGEPHLVFHLAKAGWLRWKDEMPPASTPAGRPMGRRAGPLALRVWLDDG 122 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + R+ + +V + + P A L +N Sbjct: 123 AG---FDLTEAGTRKRLAVHVVGSPEEVGPIASLGFDPRSEL---TAERLGAALRTRNQQ 176 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK AL +Q +VAGIGN Y E L A++SP T+SL ++ + +L ++VL Sbjct: 177 LKGALRDQTLVAGIGNAYSDEILHAARMSPFTLTKSLTDDD------VARLTDATRQVLD 230 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ A + G +V+G+TGE C CG ++R + A RS YC Sbjct: 231 AAVAAASGKPAAELKDAKRRG-----MAVHGRTGETC-PVCGDVVREVSFADRSLQYCAT 284 Query: 287 CQ 288 CQ Sbjct: 285 CQ 286 >gi|333024066|ref|ZP_08452130.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] gi|332743918|gb|EGJ74359.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] Length = 263 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 95/292 (32%), Gaps = 39/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTAADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ + Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAILGTEARTAVGYRLPVVELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L L ALL+Q+ +AGI Sbjct: 113 R---------TADEDRAVGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +++P + + L Sbjct: 164 GNVYKSELCFLLRVTPWTPVGDVPRPARATALAARLLDANRDTFRRV------------- 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 ----TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|256784815|ref|ZP_05523246.1| DNA glycosylase [Streptomyces lividans TK24] gi|289768704|ref|ZP_06528082.1| DNA glycosylase [Streptomyces lividans TK24] gi|289698903|gb|EFD66332.1| DNA glycosylase [Streptomyces lividans TK24] Length = 276 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 104/293 (35%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLHDALAGRVLTRSDFR-------VPRYATVDLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T + YR+ D Sbjct: 54 LTRVEGGLTVHSHLRMDGSWKVFAPGQ-RWSGGPAHQIRVILGTADRTAVGYRLPVLDIL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + Q + L + L ALL+Q+ +AGI Sbjct: 113 R---------TAEEQRAVGHLGPDLLGPDWDPERALDNLRADPPRALGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL-YKLIQEIQKVLIDAIDAGGSSLRDY 239 GN+Y E + ++P L + L KL++ + Sbjct: 164 GNVYKSELCFLLGVTPWLPVGELPADRAARLPTLAKKLLEANRDHP-------------- 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + G VYG+ PCL CG +R Q R T++C CQ Sbjct: 210 --VRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGSRERPTYWCPTCQ 259 >gi|304311679|ref|YP_003811277.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] gi|301797412|emb|CBL45632.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] Length = 271 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 107/291 (36%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I L + N + ++ L +S +I + R K L Sbjct: 1 MPEGPEIRRIADQLSAALLNKPLHEVWFAFPKL-----QSYSPQLHRSQITGIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LS+ H + G +II V I+ N T T Sbjct: 56 LTHFSIGLSLYSHNQLYGRWIISTPDDPITSTRS--PRVRIAANNVTATLYSA------- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++L T+ +P L+ +GP+ D F + + H+ H NL LL+Q Sbjct: 107 --SNIELWPTNEVQSHPFLQRIGPDVLDKEFTSDQVAHRLLQPHFARRNLGALLLDQSFF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LWRA+LSP + + L + L I + + G Sbjct: 165 AGLGNYLRAEILWRAELSPSSRPQDLTPE------KISSLAHAILNIPRLSYATRGLVAD 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + G C S CG +I++ R F+C +CQ Sbjct: 219 SARIAPDPYQDGNFHFEVFKREGMLC-SRCGSVIQKATHNARPLFFCAHCQ 268 >gi|150008625|ref|YP_001303368.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] gi|149937049|gb|ABR43746.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] Length = 277 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 111/294 (37%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDIFMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKTYFISLIGNLKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|297582947|ref|YP_003698727.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] gi|297141404|gb|ADH98161.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] Length = 274 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 105/294 (35%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + N + ++ L + + V + K L Sbjct: 1 MPEGPEIRLAADEVEHAVLNKPLLEVFFGLPPL-----KDYEDILTRATVNRVQTKGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + S+ H + G + I + + ++L + ++Y+ Sbjct: 56 LTHFDNGYSVYSHNQLYGKWYI----KPSYSYPKTNRQLRLALHTGD---RSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + ++ T +P ++ GP+ L Q N L LL+Q + Sbjct: 109 ----IAVLRTDEVPDHPFIKKTGPDILSEPVTVNDLLRQMTDKRFFNRQLGGLLLDQTFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AGIGN E L+ + P ++ L L +L + + ++ + + G +L Sbjct: 165 AGIGNYLRTEILFITGIHPKKRPADLSD------TALIRLAEAVILMMTRSYETKGLTLD 218 Query: 237 RDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G ++ + + EPC C I +I A R + C CQ Sbjct: 219 PERVQTKKAAGEPRSHYRHFAFNRHMEPCY-QCRTAIEKITVASRRLYVCPVCQ 271 >gi|189189872|ref|XP_001931275.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972881|gb|EDU40380.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 424 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 110/306 (35%), Gaps = 34/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + L + T+ + ++ + F A GKK++D ++ Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTIKGVNALDDDIVYGKVGTSASAFKKAITGKKVVDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + L+ + H GM+G I++ AKP K + + Sbjct: 61 GKYFWLVLDTPPHPLFHFGMAGWLEIKNEETGYYRSAKPEKTEWPPKFWKFVLQMEEEPE 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 V + D RR + LV+ + + P + +L + K + Sbjct: 121 NEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVEWLGKKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E +++AKL P + + + + L + I V Sbjct: 181 KALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQ------IKTLHEAIMYVCDT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRSTFY 283 A+ +G F + + + G E G+ I + GR++ Sbjct: 235 AV-----------AANGDSDLFPEHWLMKHRWGKGKKEASKLPNGEKITFLKVGGRTSAI 283 Query: 284 CTYCQK 289 QK Sbjct: 284 VPSVQK 289 >gi|111226069|ref|YP_716863.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111153601|emb|CAJ65359.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 292 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 103/294 (35%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L V + + L+ P +A G + V R K+ Sbjct: 1 MPELPEVDALAAFLRETALGRVVERVEPVAVSALKTFDPP--VSALHGAALAAVERHGKF 58 Query: 60 LLI----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L + L ++ HL +G + + A P + + ++ + Sbjct: 59 LDLVFALPTGERLDLVTHLARAGWLRWKPSQPAAPARPGRGPLALRVTFDDRSGFDL--- 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG-PEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + + + + P + LG + A + LK L +Q Sbjct: 116 -TEAGTQKRLAVYVVRDPAEVPGIARLGLDPLGADFTVAALEEILAAAGRAQLKGVLTDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN Y EALW A+LSP + L L+ + A Sbjct: 175 SRLAGVGNAYSDEALWTARLSPYKPASGLSAAETASLH--AALVGVLTAARDSAAGLAAG 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L+ + SV+G+ G PC CG +R + A R+ YC CQ Sbjct: 233 ELKAEKKAN---------LSVHGRAGSPC-PRCGDTVREVSFADRALQYCPTCQ 276 >gi|21224106|ref|NP_629885.1| DNA glycosylase [Streptomyces coelicolor A3(2)] gi|7531104|sp|O86820|Y5760_STRCO RecName: Full=Putative DNA glycosylase SCO5760; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase SCO5760; Short=Putative AP lyase SCO5760 gi|3294248|emb|CAA19861.1| DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 276 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 103/292 (35%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLHDALAGRVLTRSDFR-------VPRYATVDLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T + YR+ D Sbjct: 54 LTRVEGGLTVHSHLRMDGSWKVFAPGQ-RWSGGPAHQIRVILGTADRTAVGYRLPVLDIL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + Q + L + L ALL+Q+ +AGI Sbjct: 113 R---------TAEEQRAVGHLGPDLLGPDWDPERALDNLRADPPRALGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + ++P L + L K + E + Sbjct: 164 GNVYKSELCFLLGVTPWLPVGELPADRAARLPTLAKKLLEANR---------------DR 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + G VYG+ PCL CG +R Q R T++C CQ Sbjct: 209 PVRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGSRERPTYWCPTCQ 259 >gi|303272279|ref|XP_003055501.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463475|gb|EEH60753.1| predicted protein [Micromonas pusilla CCMP1545] Length = 330 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 47/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----RKNLRFDFPHH-FSAATRGKKIIDVS 54 MPELPEVE R + T+ + + + + + F++A +G+ + Sbjct: 1 MPELPEVESARVLCEKHIVGATIVSVEFNEDGTYDEKIFKEIDESQFTSALKGRTVKAAR 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK---------NPQHNHVTISLTN 105 R K+L +L + + H GM+G+ I+ K P+ + ++ +N Sbjct: 61 RLGKHLWWDLGTRSTPLFHFGMTGAMTIKGGGSIVKYKAFAVDTVNWPPRFAKLVVTFSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + Y DPRRFG + LV+ + + PPL LG +P + F K+ + Sbjct: 121 G-----VTLAYTDPRRFGRVRLVD-GVVTESPPLSDLGFDPLLAMPDEKTFASLFAKRAA 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+QK+ AG+GN E L+ A++ P + +SL L + + V+ Sbjct: 175 PVKAVLLDQKVAAGVGNWVADEVLFHARVHPEQPAKSLTHGQ------LAMVRDAMSMVV 228 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A +AG S + F + + + G+ G + GR+T + Sbjct: 229 TVACEAGAISEK-----------FPEDWLFHHRWGK----VTGNKV-----GGRTTAFVP 268 Query: 286 YCQK 289 QK Sbjct: 269 SVQK 272 >gi|315503877|ref|YP_004082764.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Micromonospora sp. L5] gi|315410496|gb|ADU08613.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Micromonospora sp. L5] Length = 269 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 106/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDKVHADSPQGRF---AEGAARLSGTVLDGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G L++ VHLG+ G F + + + L ++ ++ + P Sbjct: 58 YAGELTLHVHLGLYGKF-----ADGPGEPPAPVGQLRLRL----HSDRHWLELRGPTACE 108 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + E + LGP+P + + + + L LL+Q +VAG G I Sbjct: 109 LLTPPEVAALRD-----RLGPDPLRADADPDRAYARIRRSPTPLAALLLDQSVVAGTGLI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 +V EAL+RA L P+ R L +L ++ ++ A++ G + Sbjct: 164 FVTEALFRAGLPPLLPGRELTPAGW------AELWADLVTLMTRAVERGRIDTVRDADLP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G VY + G PC CG + R AGR+ ++C CQ Sbjct: 218 EATGRAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYWCPTCQ 267 >gi|116075002|ref|ZP_01472262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] gi|116067199|gb|EAU72953.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] Length = 200 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 18/216 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F+ + + +H V + + D R FG M V + Sbjct: 1 MTGQFLWLDDAT----EPCRHTRVRFWDPEGR-----ELRFIDMRSFGEMWWVPPGDPLE 51 Query: 136 --YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 L+ LGPEP + FN YL + ++K ALL+Q +VAG GNIY E+L+ A Sbjct: 52 SVITGLKKLGPEPFSDDFNGGYLKQRLKNSKRSIKAALLDQSLVAGAGNIYADESLFAAG 111 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 ++P L L +L + VL +I AGG++ D+ ++G G + Sbjct: 112 IAPHTAAGQLKLAQ------LNELCACLVDVLQKSIGAGGTTFSDFRDLEGVNGNYGGQA 165 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SVY +TG PCL+ CG I R AGRST +C CQ+ Sbjct: 166 SVYRRTGSPCLA-CGTPIVRDKLAGRSTHWCPNCQR 200 >gi|285808428|gb|ADC35954.1| putative fapy-DNA glycosylase [uncultured bacterium 98] Length = 299 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 112/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + L + + + L L A G+++ID+ R K + Sbjct: 1 MPELPDILLYLHALRPRIVGQHIEAVRLASPFLLRSIDPPL-NALEGRRVIDLHRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LEG L I+ HL ++G F + P K L + + + Sbjct: 60 VIALEGELFIVFHLMIAGRFRWKPKGTRIPGK-------VGLLAIDFPAGSLLLTEAGSK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + +N LK AL + + +GI Sbjct: 113 RQASLHLVAGRAALA----AHDPGGLEVLGASVEEFVGALTAENHTLKRALTDPHLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A LSP + TRSL + G KL + + +L I+ S + Sbjct: 169 GNAYSDEILHAAGLSPFKLTRSLTGDEG------RKLYEATRGMLETWIERLQSEAGE-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F++ +V+GK G+PC CG ++R+ A YC CQ Sbjct: 221 EFPEKVTAFRSEMAVHGKYGKPC-PECGTPVQRVRYAANEANYCPSCQ 267 >gi|255014423|ref|ZP_05286549.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_7] Length = 277 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 111/294 (37%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F E Y + L P + KK+ + K L ++ Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCPLDERFDKAYFISLIRNFKKDISAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + L+ A++SP RK +L + + + L ++ L + GG Sbjct: 171 IPGLGNGVCQDILFNARISPKRKISTLSEED------IDSLFNTVKSTLEEMTCRGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 225 E--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|284028154|ref|YP_003378085.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] gi|283807447|gb|ADB29286.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] Length = 287 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 112/287 (39%), Gaps = 19/287 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE + L V + + + SA G I DV R K+L Sbjct: 4 PELPEVESLAGFLRERAVGRAVVRADITAISALKTYDPPISA-LVGLLIDDVRRHGKFLD 62 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 IE +G +++HL +G P++ + + ++ + + Sbjct: 63 IEAQGV-HLVIHLARAGWLRWREQQSTTPVRPGKGPIACRVVLDDESGFDLTEAGTQKKL 121 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ + P + LGP+P S + LK L NQ ++AGIG Sbjct: 122 AVYVVR----DVAEVPGIARLGPDPFTLS-AEDFGAILHEAGRVQLKGVLRNQSVIAGIG 176 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N Y E L A++SP + +L + L+ L +Q+ L DA+D + Sbjct: 177 NAYSDEILHVARMSPFKPASNLSDDE------LHVLYTAMQETLRDAVDRSKGLAAQDLK 230 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+ GE C CG ++R + A S YC CQ Sbjct: 231 SEKKSG-----LRVHGRKGEKC-PVCGDVVREVSFADSSLQYCATCQ 271 >gi|182413447|ref|YP_001818513.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177840661|gb|ACB74913.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 301 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 108/289 (37%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+V + L + + I L LR P + +++ + R K Sbjct: 1 MPELPDVTVYLEALERRLIGRVLEKIRLLDLFVLRTALPP--IDSLESRRVERLRRLGKR 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + +++HL ++G KN V T Sbjct: 59 IALGFDDGRWLVIHLMIAGRLQWTPPGEKSRAKN-----VIAEFRFENGTLALTEAGTKR 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + E L+ + + + ++N LK AL + ++ +G Sbjct: 114 RASLHVVADEAGLEAHDRG------GIDVLTCSPEEFRGRLMRENHTLKRALTDPQLFSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSP+ T+ L + +L + ++VL+ D + Sbjct: 168 IGNSYSDEILHAAKLSPVTLTQKLSPEE------IARLHRSTREVLMAWTDRLRREAGE- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK G+PC CG ++RIV A YC CQ Sbjct: 221 -GFPEKVTAFRPEMAVHGKFGKPC-PVCGTTVQRIVYAENEVNYCPRCQ 267 >gi|197124421|ref|YP_002136372.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] gi|196174270|gb|ACG75243.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] Length = 321 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K L Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLYLALHLMIAGRLHWKDPGARLPGKAG---LAAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + + P D + A L +N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALAALDRGGIEPLDVDLAAFAAALRR----ENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L + ++VL Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|220919150|ref|YP_002494454.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957004|gb|ACL67388.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 321 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K L Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLHLALHLMIAGRLHWKDPGARLPGKAG---LAAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + + P D + A L +N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALAALDRGGIEPLDVDLAAFAAALRR----ENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L + ++VL Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|302542087|ref|ZP_07294429.1| endonuclease VIII [Streptomyces hygroscopicus ATCC 53653] gi|302459705|gb|EFL22798.1| endonuclease VIII [Streptomyces himastatinicus ATCC 53653] Length = 273 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 103/292 (35%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L L + G+++++V R K+L Sbjct: 5 MPEGDTVWQTARRLDDALAGPPLTGCDLRVPRL-------ATVDLTGRRVLEVVARGKHL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++++ + PQH + T YR+ + Sbjct: 58 LTRVEGGLTLHSHLRMDGAWLVYGHG-ERWRGGPQHQIRAVLATAERTAVGYRLPVLELL 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L + + ALL+Q+ +AGI Sbjct: 117 R---------TADEDRAVGHLGPDLLGPDWDPDEALGRLLADPSRPVGEALLDQRNLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + ++ P + +L++ + Sbjct: 168 GNVYKCELCFVLRIPPWLPIGRVPSPERLVAVA-KRLLEANRTRRA-------------- 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + + VYG+ G PCL CG +R Q R+TF+C CQ Sbjct: 213 RVTTAHARPDRRLWVYGRAGRPCL-RCGTPVRAADQGRAGQERTTFWCPVCQ 263 >gi|296269082|ref|YP_003651714.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296091869|gb|ADG87821.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 261 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 104/292 (35%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T P H +A RG+ ++ R K+L Sbjct: 1 MPEGDAVYRAAKRLRESLDGRVLTRSEFR-------VPRHATADLRGRAVLTTVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L+I HL M G + I+ P + V + L N T Sbjct: 54 LTRVEGGLTIHTHLRMDGRWRIDRAGRP----IPGGDVVRLILANETWQ-------AVGI 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G +L+ T + + + A + + ALL+Q+ +AG+ Sbjct: 103 RLGVTELLPTDREDRVVGHLG-PDPLGPDWDAAWAARNLARAPGRAIGEALLDQRNLAGL 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G I+ E L+ A++SP R S+ + + + + + K S D Sbjct: 162 GTIWRAETLFAARMSPWRAAGSIPVDELEALAAIARELLDAAKD-----QPLPVSTGDRR 216 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G PC CG I R R ++C CQ Sbjct: 217 RG--------RELFVYGRAGRPC-RRCGTPISRGELGTAPDERLIYWCPVCQ 259 >gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gibberella zeae PH-1] Length = 392 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 111/311 (35%), Gaps = 39/311 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + F AA +GKKI+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASATDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----TSCAKPIKNPQHNHVTISLT----NNT 107 KY I LE +++H GM+G I+ T+ K +K +H Sbjct: 61 GKYFWIALEKPPHLVMHFGMTGWIHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKK 163 + + V + D RRFG + L+ P + F YL + + Sbjct: 121 GSPEVEVAFTDSRRFGRVRLINCPGDEIRQHSPLVENGPDPVVDVDRFTEEYLHSKMRAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + LYK+I+ + Sbjct: 181 HVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQ---ITTLYKMIRYVC- 236 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-----PCLSNCGQMIRRIVQAG 278 + V G F + + G+ G+ I I G Sbjct: 237 -------------QTAVDKLGDSDEFPEHWLFNYRWGKGSKDAATKLPNGEKIAFITVGG 283 Query: 279 RSTFYCTYCQK 289 R++ Y QK Sbjct: 284 RTSCYAPGVQK 294 >gi|118619547|ref|YP_907879.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571657|gb|ABL06408.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 287 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 103/288 (35%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + +L T+ + + ++ F A G+ + R KYL Sbjct: 1 MPELPEIGALVDHLRRPAVGTTIGRVDVAALSVLKTFDSPI-NALHGQTVTGAGRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L +I HL +G A P+ P + + + T + Sbjct: 60 GVQAGP-LWLIAHLSRAGWLRWSDKLAAAPL-PPGKGPIALRVHLGTLGVAPGFDLTEAG 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + Q P + P L +K + +QK++AGI Sbjct: 118 TQKRLAVWLVEDPRQVPGIA--TLGPDALELGPEELAGVLGPHTGRIKTVMTDQKVIAGI 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP L + L L + VL DA+ Sbjct: 176 GNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVLTDAVSRSVG-----Q 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 225 GAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCATCQ 271 >gi|302869641|ref|YP_003838278.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] gi|302572500|gb|ADL48702.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] Length = 269 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 105/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDKVHADSPQGRF---AEGAARLSGTVLDGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G L++ VHLG+ G F + + + L ++ ++ + P Sbjct: 58 YAGELTLHVHLGLYGKF-----ADGPGEPPAPVGQLRLRL----HSDRHWLELRGPTACE 108 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + E + LGP+P + + + + L LL+Q +VAG G I Sbjct: 109 LLTPPEVAALRD-----RLGPDPLRADADPDRAYARIRRSPTPLAALLLDQSVVAGTGLI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 +V EAL+RA L P+ R L +L ++ ++ A++ G + Sbjct: 164 FVTEALFRAGLPPLLPGRELTPAGW------AELWADLVMLMTRAVERGRIDTVRDADLP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G VY + G PC CG + R AGR+ ++C CQ Sbjct: 218 EVTGRAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYWCPTCQ 267 >gi|116622565|ref|YP_824721.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|116225727|gb|ABJ84436.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 291 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 106/288 (36%), Gaps = 32/288 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V + L + T+T + L L A G+++IDV R K + Sbjct: 1 MPELPDVVVYVEALCARIAGHTLTRVTLRGPFLLRTVTPPI-DALYGQRVIDVRRAGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I E L +++HL ++G N T + + Sbjct: 60 AIGFENGLWLVIHLMIAGRLHWNGKRQP---------VAAFEFDNGT----LTLTEAGTQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +++ + + T +N LK +L + ++ +GI Sbjct: 107 HRAQIHVLDAAPE---------TAGLEVLDATLAEFTAALRAENHTLKRSLTDPRLFSGI 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSPI T L + + +L ++ L + D Sbjct: 158 GNAYSDEILHRARLSPIAMTFKLTEEE------ITRLYGATREELELWVKRLREESGDKF 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ + +GK G PC CG I+RI A T YC CQ Sbjct: 212 --PEKVTAFREEMAAHGKYGNPC-PRCGGKIQRIRYAANETNYCPACQ 256 >gi|330984358|gb|EGH82461.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 258 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 84/273 (30%), Positives = 123/273 (45%), Gaps = 25/273 (9%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 M + + LR G+ I+ +SR KY+LIEL ++ HLG Sbjct: 6 QRMVGKVFVTGEVLNERLREPVQSDLLLKISGQAIVSISRLGKYILIEL-TRGHLVCHLG 64 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G +I S H+ + S + T ++YND R+FGF+ S + Sbjct: 65 MTGKLVINAESAK-------HDRIRFSFEDGTT-----LVYNDVRKFGFVMY--ESDVAR 110 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 L LG EP +F+ L + +K LL+Q+ +AG+GNIYV E L+ +S Sbjct: 111 NKYLSHLGIEPLSEAFSPESLMAMAAGNRTPIKVFLLDQRKIAGLGNIYVNEVLYECGIS 170 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P TR L +L+ I+ +L +I+ GGSS+ DY D G FQ+ F V Sbjct: 171 PHLLTRDLSS------CQASRLVPAIKTMLKRSIELGGSSISDYRDADDKKGSFQDTFRV 224 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ + G + R Q GRSTFY Q Sbjct: 225 YGRD----FDHLGNAVTRATQGGRSTFYVEALQ 253 >gi|261194587|ref|XP_002623698.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239588236|gb|EEQ70879.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239613483|gb|EEQ90470.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ER-3] gi|327355061|gb|EGE83918.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ATCC 18188] Length = 378 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 109/306 (35%), Gaps = 31/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRKYLVGNTITKVHVQDDPIVFGKAGTTAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF-------IIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 KY I + ++H GM+G T+ A ++ + + Sbjct: 61 GKYFWITMSSPPHPVMHFGMTGWLKFTIMNTHYRRTTAANNEESQWPPKFWKFILQIDDA 120 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNS 165 K + DPRR G + LV P + +L+ + K Sbjct: 121 SKSETAFVDPRRLGRVRLVNCPGADIRKHSPLKENGPDPILDKHIMTLDWLSRKLASKKV 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q ++GIGN E L+ AK+ P + + ++ Q + +L I V Sbjct: 181 PIKALLLDQSNISGIGNWMGDEILYHAKIHPEQYSNTIEQGQ------IEQLHSAISYVC 234 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN--CGQMIRRIVQAGRSTFY 283 ++D G S + F++ + K + G I I GR++ Sbjct: 235 STSVDLLGDSEKFPADW-----LFKHRW---TKGKQKHSQRLPNGDKIVFITVGGRTSAV 286 Query: 284 CTYCQK 289 QK Sbjct: 287 VPSVQK 292 >gi|149922422|ref|ZP_01910855.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816702|gb|EDM76193.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 302 Score = 115 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 111/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + +L + T++ + + + + GK+ VSR K + Sbjct: 1 MPELPDITLYVEHLRRRVVGETLSRLQILHPFVLRSVEPSLGS-LAGKRATGVSRLGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ LEG + +++HL ++G + K + + T R Sbjct: 60 VLTLEGEVHVVIHLMIAGRLHWKAPGAKLGSK---RTLLAAHFDHGALTLTEA---GSKR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + P E + + F A LK AL + +I+ GI Sbjct: 114 RASVHLALGAEGLAAHDPGGVDVFEASSSEFGAAIQARNHT-----LKRALTDPRILDGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSPI+ T L + L + L + + Sbjct: 169 GNAYSDEILHAAKLSPIKWTSRLSAAE------IEALHAACKSCLEASTARLREDFGE-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK GEPC CG ++RIV A R T YC CQ Sbjct: 221 GFPSKVTAFRADMAVHGKYGEPC-PECGDPVQRIVYASRETNYCATCQ 267 >gi|302522265|ref|ZP_07274607.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302431160|gb|EFL02976.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 263 Score = 115 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 95/292 (32%), Gaps = 39/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ + Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRVILGTEARTAVGYRLPVVELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L L ALL+Q+ +AGI Sbjct: 113 R---------TADEDRAVGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +++P + + L Sbjct: 164 GNVYKSELCFLLRVTPWTPVGDVPRPARATALAARLLDANRDTFRRV------------- 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 ----TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|318061010|ref|ZP_07979731.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actG] gi|318078758|ref|ZP_07986090.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actF] Length = 263 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 95/292 (32%), Gaps = 39/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ + Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAILGTEARTAVGYRLPVVELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L L ALL+Q+ +AGI Sbjct: 113 R---------TADEDRAVGHLGPDLLGPDWDAGAALARLLAAPERPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +++P + + L Sbjct: 164 GNVYKSELCFLLRVTPWTPVGDVPRPARATALAARLLDANRDTFRRV------------- 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 ----TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|296807993|ref|XP_002844335.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] gi|238843818|gb|EEQ33480.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] Length = 392 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 104/310 (33%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F +GK +I ++ Sbjct: 1 MPELAEVARIVNYIRKHLVGHTIAKVVANHDDLLFGKVGTSAEEFKKHMQGKTVIGTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKNENFEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------ITELHSAINYV 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRIVQAGR 279 ++ + G F + + + G+ G+ I + GR Sbjct: 235 CSVSV-----------DLKGESSDFPTDWLFHHRWGKGKKGAAGKLPSGEAIVFVTVGGR 283 Query: 280 STFYCTYCQK 289 ++ QK Sbjct: 284 TSAVVPSVQK 293 >gi|332997432|gb|EGK17048.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 123 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 7/130 (5%) Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 ++ + +K L++ K+V G+GNIY E+L+ A + P R SL L + Sbjct: 1 MREEKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAE------CELLAR 54 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R Sbjct: 55 VIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQR 113 Query: 280 STFYCTYCQK 289 +TFYC CQK Sbjct: 114 ATFYCRQCQK 123 >gi|86160345|ref|YP_467130.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776856|gb|ABC83693.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 320 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K + Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLFLALHLMIAGRLHWKDPGARLPGKAG---LAAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + L P AD + A L +N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALAALDRGGLEPLGADLAAFAAALRR----ENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L++ ++VL + Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLLEATREVLAGWTARLREAAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|84495570|ref|ZP_00994689.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84385063|gb|EAQ00943.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 286 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L ++ VT + L ++ F A G I VSR K+L Sbjct: 1 MPELPEVQALVDFLSTRTADLAVTGVELGSISVLKTFNPP-PEALVGAPIDSVSRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G ++ HL +G + ++ + + + L++ + + Sbjct: 60 DLD-CGGTHLVFHLARAGWLRWSDALSSTRLRPGKSPIALRVRLSDGSGFD-----LTEA 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + S P + LGP+P ++F+ +N+ LK L +Q I+AG Sbjct: 114 GTKKSLAAYIVSSPSDVPGIARLGPDPLSDAFSLKVFREILGGRNAQLKGVLRDQSIIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AKLSP L + L + + A + L+D Sbjct: 174 VGNAYSDEILHVAKLSPFAMAAKLDDEQTE--RLYAALRDTLSAAVGAATGKPAAELKDA 231 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+TGE C CG ++R + A S YC CQ Sbjct: 232 K---------RQGMRVHGRTGETC-PECGDVVREVSFADSSLQYCATCQ 270 >gi|91215880|ref|ZP_01252849.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] gi|91185857|gb|EAS72231.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] Length = 260 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 118/286 (41%), Gaps = 30/286 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + + + +T++ L F A +++I+ R KYL Sbjct: 1 MPELPEVQGYKTYIDSTSLHQRITEVDCRDTKLLKKPKADFDAYLYNQELIETQRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G +++H GM+G + P+ H+ +S N + + + R Sbjct: 61 FLKTTGKKILVMHFGMTGRPHYYKNEEDR----PKFGHLELSFENG-----FHFAFENKR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ DL+++ + F+ + +++K +++Q + AG+ Sbjct: 112 KFGWWDLIDSIA----DFKASHKLSDDARDLTLEDFKQSFNGRKTDIKKIIMDQSVAAGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L+++K+ P +K + + + + ++KV+ AI+ + +D+ Sbjct: 168 GNWMADEILYQSKIHPTKKVIEMTDTD------IKSVFDAMKKVIEVAIENH-AHYKDF- 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + + K G C G I +I GR+T++ Sbjct: 220 --------PKTFLMHFRKEGATCYHT-GAQIEKIKVGGRTTYFSPQ 256 >gi|111225082|ref|YP_715876.1| endonuclease VIII [Frankia alni ACN14a] gi|111152614|emb|CAJ64355.1| Endonuclease VIII [Frankia alni ACN14a] Length = 301 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 95/297 (31%), Gaps = 42/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R + + + PH +A G++II V+ R K+L Sbjct: 1 MPEGDTVWRVARRMDAALAGARLLSSDFR-------VPHLATADLSGQRIIGVAARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +G LS+ H M GS+ + V + T ++ V Y Sbjct: 54 LTRFDGGLSLHTHFRMEGSWHLYRPGVPWSGGPAWQIRVVL-----TTAEQVAVGYRLAI 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E + + + + ALL+Q+I+AG+ Sbjct: 109 VELLATSREQDAVGHL-----GPDVLGPDWDLDVVVAALRAVPQRQIGAALLDQRIIAGL 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EA + A +SP + ++ ++ A + Sbjct: 164 GNIWRTEACFVAGVSPWTPVGD---------------VPDLPGLVRRAQAMIRTGAHGGH 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---------GRSTFYCTYCQ 288 + VYG+ G PC CG I Q R T +C CQ Sbjct: 209 QVTTGSTRPGEEHWVYGRAGRPC-RRCGSRILTADQGRLPGRIDEESRRTTWCPRCQ 264 >gi|303311231|ref|XP_003065627.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105289|gb|EER23482.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320039451|gb|EFW21385.1| formamidopyrimidine-DNA glycosylase [Coccidioides posadasii str. Silveira] Length = 416 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 108/310 (34%), Gaps = 41/310 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE---------HTSCAKPIKNPQHNHVTISLTNNT 107 KY + + ++H GM+G I+ P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEGDGPWPPKFWKFRLVMDDDK 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKK 163 K + D RR G + LV+ + P +L KK Sbjct: 121 ---KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVTDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + + L + Sbjct: 178 KVPIKALLLDQSIMSGLGNWMADEVLYHSQIHPEQTSNT--------------LDDSQIR 223 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGR 279 L AI ++ D + G F + ++ + EP G + I GR Sbjct: 224 ELNSAIHYVCATSVDLL---GDSARFPADWLMHHRWNKGKKEPSKMLNGDPVTFITVGGR 280 Query: 280 STFYCTYCQK 289 ++ QK Sbjct: 281 TSAIVPAVQK 290 >gi|239982676|ref|ZP_04705200.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|239982678|ref|ZP_04705202.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291454525|ref|ZP_06593915.1| DNA glycosylase [Streptomyces albus J1074] gi|291454527|ref|ZP_06593917.1| DNA glycosylase [Streptomyces albus J1074] gi|291357474|gb|EFE84376.1| DNA glycosylase [Streptomyces albus J1074] gi|291357476|gb|EFE84378.1| DNA glycosylase [Streptomyces albus J1074] Length = 264 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 101/293 (34%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L L + G+ +++V R K+L Sbjct: 1 MPEGDTVHQAAGRLHQALAGQELTVSDLRVPRL-------ATVDLTGRTVVEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M GS+ I + P H + T + YR+ + Sbjct: 54 LTRLEGGLTLHSHLRMDGSWRIFAPG-ERWRGGPGHQIRAVLGTASRTAVGYRLPVLELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + A L + A+L+Q+ +AGI Sbjct: 113 R---------TTAEDEAVGHLGPDLLGPDWSPAEALARLAAAPEREVGEAVLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + +++P L + +L++ + Sbjct: 164 GNVFKSELCFLLRVTPWLPVGELPDPERL-TTLAARLLKANRHRPRR------------- 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + G VYG+ G PCL CG +R Q R T++C CQK Sbjct: 210 ---TTTGRPDRPLYVYGRAGRPCL-RCGATVRTAQQGDPTRERPTYWCPGCQK 258 >gi|145637016|ref|ZP_01792680.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269874|gb|EDK09813.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 191 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 13/203 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + + LR+ + +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLKGAIIEKIVVRQPKLRWMVSEELAQ-ITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQL-ETGYMIGHLGMSGSLRVVEKGD----LIDKHDHLDIVVNNGK-----VVRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTE--KLNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSL 203 GNIY E L+ L P + +R Sbjct: 168 GNIYANETLFLCNLHPQKNSREF 190 >gi|312193990|ref|YP_004014051.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311225326|gb|ADP78181.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 292 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPE+E + L VT + LR P A G ++D +R K+ Sbjct: 1 MPELPEMEALASVLRDRAVGKVVTRAEPVAINALRTVSPG--PADLVGATLVDATRHGKF 58 Query: 60 LLIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRV 114 L + L ++ HL +G + + P + + + + + Sbjct: 59 LDLVFAGTGGERLDLVAHLSRAGWLRWKDSQPTTPGRGGRGGLAWRLVFDDGSGFD---- 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLN 173 + + + + P + LG +P D +F L +K L + Sbjct: 115 -LTEAGTQKRLAVYLVRDPAEVPGVARLGIDPLDPAFTVEALAALLTAAGRSQVKGVLTD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN Y E LW A+LSP + L + + L + + L A++A G Sbjct: 174 QSVLAGVGNAYSDEVLWAARLSPFAPSSGLSGDQ------VAALHEALVGTLRAAVEAAG 227 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +V+ +TGE C CG +R++ A RS YC CQ Sbjct: 228 GLGAADLKAEKKA-----NLAVHARTGEAC-PRCGDTVRQVSFADRSLQYCPTCQ 276 >gi|309774801|ref|ZP_07669823.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] gi|308917486|gb|EFP63204.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] Length = 273 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 108/298 (36%), Gaps = 34/298 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I ++L T+ I + + +F F P + +G+ I + R Sbjct: 1 MIELPEARTIAKDLRKCCIGKTIQSISGNFTDHKFTFYYGDPDTYHELLKGRSITAIIDR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ +E+E ++ G + + + + K + + ++ T+ + +Y Sbjct: 61 NFYVELEIENF-VLVFRDGANIRWYAQPRAFKK-------SKLLLTFTDGSCLNITTSMY 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F V Y L +L P + + + ++K L Q+ Sbjct: 113 AVISVFS--KAVGWQDTYYTKELHSLSPLDPNFTLETFLNEINEETEKLSIKAFLTTQQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-----KDILYKLIQEIQKVLIDAIDA 231 +GIGN + L+ A L P RK +L + + K L +++ + + I Sbjct: 171 FSGIGNGVCQDILFHAGLHPKRKVHTLTGDERSSLFLSIKHTLQRMVDDGGRDTEKTIF- 229 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GY S + G CG I++ G S +YC CQK Sbjct: 230 -----------NEKGGYHTIMSSRHFLEG---CPKCGGTIQKEQYMGGSIYYCPSCQK 273 >gi|310642365|ref|YP_003947123.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] gi|309247315|gb|ADO56882.1| DNA-(Apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] Length = 272 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 19/286 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVTVSREKSINTEVETFKKQLLGATVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + + P + + Sbjct: 61 IFHLNTGKRLVLHLMLG-----GLLYLGTEEQRPDRTIQIELDFSGVKLYFIGLRLGYLH 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + E PL T + + LK L+NQ++ +GI Sbjct: 116 LLTAKETDEALSDLGPDPLDR--------RMTLENFTARLKGRRGILKTTLVNQQVFSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A +P K ++++Q + + KL Q VL +A GG + Sbjct: 168 GNCYSDEIAYIAGFTPGSKVQNIVQ----SPEKVEKLYHATQSVLREATAEGGYMEMPLM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 D G F + VY + GE S G I R+ AG+ FYC Sbjct: 224 EGDTLTGGFDHQCRVYDREGEESPS--GGKIVRVELAGKKAFYCPV 267 >gi|50842930|ref|YP_056157.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840532|gb|AAT83199.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|315106731|gb|EFT78707.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] Length = 256 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEPLPP 255 >gi|120402637|ref|YP_952466.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119955455|gb|ABM12460.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 250 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 83/289 (28%), Gaps = 39/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLREALEGRELTRCDVR-------VPRYAAVDLSGQTVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M G+++I + + Sbjct: 54 FIRVGQAS-IHSHLKMDGAWVIGRVRVPSYKIRIVLETARSRASGVDLGVLEILDRATDM 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + + ALL+Q+++AG+ Sbjct: 113 EAVAHLG---------------PDLLGPDWSAPLAAANLVADPSRPVAEALLDQRVMAGV 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + L P L L +V Sbjct: 158 GNVYANELCFVFGLRPGTAVGELADPVRVASRAQQMLWLNRLRVNRT------------T 205 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ G PC CG I R T++C CQ+ Sbjct: 206 TGNTRPG---QDVWVYGRAGLPC-RRCGTPIETDKGGDRVTYWCPTCQR 250 >gi|302502465|ref|XP_003013223.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] gi|291176786|gb|EFE32583.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] Length = 408 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 97/316 (30%), Gaps = 30/316 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY------KLI 218 +K LL+Q ++G+GN ++ + ++ ++ L Sbjct: 181 VPIKALLLDQANISGLGNWMGYVLHLLIYFPTTKEANAGSRDEILYHARIHPEQYSDTLR 240 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK-----TGEPCLSNCGQMIRR 273 K L +I+ S D G F + + + G G+ I Sbjct: 241 DNQIKELHSSINYVCSVSVDLK---GESSDFPTDWLFHHRWNKGKKGAAGKLPSGEPIVF 297 Query: 274 IVQAGRSTFYCTYCQK 289 + GR++ QK Sbjct: 298 VTVGGRTSAVVPSVQK 313 >gi|118472403|ref|YP_886128.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium smegmatis str. MC2 155] gi|118173690|gb|ABK74586.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium smegmatis str. MC2 155] Length = 252 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 95/288 (32%), Gaps = 39/288 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ T+T + P + + G + +V R K+L Sbjct: 1 MPEGDTVFHTAAALRAALEGKTLTRCDVR-------VPRYATVDLSGAVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M G++ I HT A + I L Sbjct: 54 FIRAGSAS-IHSHLKMEGAWRIGHTKVAPHR-------IRIVLETADTR-------AIGI 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +++++ + + + + L ALL+Q+++AG+ Sbjct: 99 DLGILEVLDRGTDMDAVAYLG-PDLLGPDWEPRVAADNLAADPDRPLAQALLDQRVMAGV 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + P +L + L + ++ D Sbjct: 158 GNVYCNELCFVFGRLPTAPVGTLKDPLRVVQRARDMLWLNRSRWNR-------TTTGDTR 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VYG+ GEPC CG +I+ R T++C CQ Sbjct: 211 NG--------RQLWVYGRAGEPC-RRCGTLIQTDRGGERVTYWCPVCQ 249 >gi|332670040|ref|YP_004453048.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] gi|332339078|gb|AEE45661.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] Length = 296 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 30/299 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L + V+ + + F P A G ++DV+R K Sbjct: 1 MPELPEVEALAGFLRGRAVDHAVSGVEVGAISALKTFRPPPD---ALVGAVVVDVTRHGK 57 Query: 59 YLLIE----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYR 113 +L + L ++ HL +G +P++ + + + L + + Sbjct: 58 WLDLMVATATGEPLHLVWHLSRAGWVRWTDQLSDRPVRPGKSPIALRVRLDDGSGFD--- 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + + + P + TLG EP + F LT +N +K L + Sbjct: 115 --LTEAGTRKRLAVHVVAEPTDVPQVATLGVEPLSDEFTQDRLTELLAARNQQVKGLLRD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AGIGN Y E L A++SP TRS + + + Q + + + A Sbjct: 173 QGTIAGIGNAYSDEILHAARMSPFAPTRSFDADRTA--TLYAAIRQVLTEAVEAASGRPA 230 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIRRIVQAGRSTFYCTYCQ 288 + L+D + V+G+TGE C CG + + A S YC CQ Sbjct: 231 AELKDAK---------RRGMRVHGRTGEACPGWDGVPCGDTVHEVSFADSSLQYCPTCQ 280 >gi|308069320|ref|YP_003870925.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305858599|gb|ADM70387.1| Formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] Length = 272 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 105/286 (36%), Gaps = 19/286 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVKVSREKSINTEVETFEKQLLGTTVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + + P + + Sbjct: 61 IFHLNTGGRLVLHLMLG-----GLLFLGTEEQRPDRTVQIELDFSGVKLYFIGLRLGYLH 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + E PL T + + LK L+NQ+I +GI Sbjct: 116 LLTAKETEEALSDLGPDPLDR--------RMTLEKFTARLKGRRGILKTTLVNQQIFSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A +P K ++++Q + + KL Q VL +A GG + Sbjct: 168 GNCYSDEIAYIAGFTPGSKVQNIVQ----SPEKVEKLYHATQSVLREATAEGGYMEMPLM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 D G F + VY + GE S G I R+ AG+ FYC Sbjct: 224 EGDTLTGGFDHQCRVYDREGEESPS--GGKIVRVELAGKKAFYCPV 267 >gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 277 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 116/303 (38%), Gaps = 41/303 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI---CLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR + + ++ + + K F A G+KI R Sbjct: 1 MPELPEVEKARRLVHDLAIGSPISRVHRPIIDDKVFVDVASGQFERALSGRKITHSKRHG 60 Query: 58 KYLLI--ELEGNLSIIVHLGMSGSF---------IIEHTSCAKPIKNPQHNHVTISLTNN 106 K L + L H GM+G+F + P+ + ++ N Sbjct: 61 KQLWWQLDGNDALVPCFHFGMTGAFVARGIDGIQYYNSKASGTGDWPPRFAKLVVAFENG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + DPRRFG + LV + + LGP+P N + ++++ Sbjct: 121 -----VELAFVDPRRFGKIKLVADVAEV----IGQLGPDPLLEMPNEEAFAALWRRRSAP 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K A+++QK++AGIGN E L+RA++ P + L L + + +V+ Sbjct: 172 IKTAIMDQKVIAGIGNWMADEILYRARVHPETRANELSSTQ------LEAIRFRVTEVVK 225 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCT 285 A + F + + + + G+ G I+ I GR+T + Sbjct: 226 VAC-----------EANSDHDLFPDDWLFHHRWGKTGGAKVNGDAIKFIEVGGRTTAFVP 274 Query: 286 YCQ 288 Q Sbjct: 275 KLQ 277 >gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue; AFUA_4G11930) [Aspergillus nidulans FGSC A4] Length = 363 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL E+ I + + T+ + ++ + F A GKK+I ++ Sbjct: 1 MPELAEIYRIVHFIRQHLVGKTLAKVSTQHDDIVYGKVGTSAAEFQKAMEGKKVIGTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I KP L K Sbjct: 61 GKYFWITMTSPPHVVMHFGMAGWLKIRDADTYYYRTDKPEDKQWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RR + LV+ + P + +L + K + Sbjct: 121 VEAAFVDFRRLARIRLVDCPAEEIRNYTPLKENGPDPLVDKDVVTKEWLGSKLSSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGN E L+ AK+ P + + +L + + +L I V Sbjct: 181 KALLLDQAVISGIGNWMGDEILYHAKIHPEQYSNTLTDDQ------VKELHSSIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + + S + H F++ +S K + L N G+ I + GR++ Sbjct: 235 STEVLADSDKFPEHW-----LFKHRWSKGKKNKQSSLPN-GEKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|184200752|ref|YP_001854959.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580982|dbj|BAG29453.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 306 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 110/318 (34%), Gaps = 43/318 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + + + + RF +A G+ + K+L Sbjct: 1 MPEGHSVHRLARQLADLFEGQQLG---VSSPQGRF---AAGAALLDGRVLTRSRAHGKHL 54 Query: 61 LIELEGNLS------IIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNTNTKK 111 ++ + HLG+ G++ A I P+ S + Sbjct: 55 YLDFTAPGDSSDVLVLRSHLGIYGAWSFAGDETFAAASSIGAPRRLGERESGSAAAAVAY 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQY------------------PPLRTLGPEPADNSFNA 153 P V + ++ + LGP+P D + Sbjct: 115 DDAGRVVPEAPVGAVRVRLAGEHGWADLRGPTLCVAESPEEAAAAAAKLGPDPLDPQADP 174 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 K + L+ Q +VAGIGNI+ E+L+R + P+ SL + + Sbjct: 175 EPFLAAAGKSRRPIGVLLMEQHVVAGIGNIFRAESLFRRGVDPMAPGTSLTRED------ 228 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG---YFQNAFSVYGKTGEPCLSNCGQM 270 L +L +E ++ + G D G + ++A VY + G+PCL CG Sbjct: 229 LLELWEENVALMAVGVRVGRIITTDPEDRPGVPDTEAWPEHANYVYHRHGQPCL-RCGAT 287 Query: 271 IRRIVQAGRSTFYCTYCQ 288 + + GR ++C CQ Sbjct: 288 VLKTDLNGRGLYWCPSCQ 305 >gi|317508930|ref|ZP_07966566.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252771|gb|EFV12205.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L V + + ++ S G+K+ V R K+L Sbjct: 1 MPELPEVQALANFLADRAVGTAVRGVDVCAFSVLKTAAPPISE-LVGQKVEQVGRAGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I G L +++HL +G + P + + + + + + + Sbjct: 60 IIR-CGELRLVIHLSRAGWLRWIR-ETPERPPKPGRGPLALRVRCGGERESFELTEAGTQ 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V D + A L + +KN L++Q ++AGI Sbjct: 118 KRLAVWVVRDEADVPSVAKLGPDALDLDEAGLAGILA----GTTARIKNVLVDQHLIAGI 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ AK+SP + L ++ VL++A++ + Sbjct: 174 GNAYSDEILFAAKISPFSPSDKTDPGQ---------LFPALRGVLLEAVERAVGQEAALL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGEPC + CG ++R + A RS YC CQ Sbjct: 225 KAEKREG-----MRVHGRTGEPCSA-CGDVVREVSFADRSWQYCATCQ 266 >gi|294631793|ref|ZP_06710353.1| endonuclease VIII [Streptomyces sp. e14] gi|292835126|gb|EFF93475.1| endonuclease VIII [Streptomyces sp. e14] Length = 281 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 101/293 (34%), Gaps = 37/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ +++ R K+L Sbjct: 1 MPEGDTVWQAARRLHEALAGRVLTRSDFR-------VPQYATVDLSGRTVLNTIARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + P H + T YR+ + Sbjct: 54 LTRVEGGLTLHTHLRMEGAWKVYGDG-ERWKGGPAHQIRVVLATAERTAVGYRLPVLELL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + + + L + L ALL+Q+ +AGI Sbjct: 113 R---------TSEEDRTVSHLGPDLLGPDWDPDLALANLLADPARQLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + ++P L + L + RD V Sbjct: 164 GNVYKSELCFLLGVTPWLPVG--------------ALPADRAAKLPLLAKKLLEANRDRV 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + + G VYG+ PCL CG +R Q R T++C CQK Sbjct: 210 -VRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGTQERPTYWCPTCQK 260 >gi|323173227|gb|EFZ58856.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] Length = 111 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY E+L+ A + P R SL L + I+ VL+ +I+ Sbjct: 1 MDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 111 >gi|310799523|gb|EFQ34416.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Glomerella graminicola M1.001] Length = 427 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 111/311 (35%), Gaps = 39/311 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV L + + + F F A +G+K++ V + Sbjct: 1 MPEIAEVARCVHFLRHHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKALKGRKVVSVGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA------------KPIKNPQHNHVTISLT 104 KY I + ++HLGM+G I+ A + P++ + Sbjct: 61 GKYFWITFDKPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKAGEADVWPPKYWKFQLETD 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQF 160 +N + DPRRFG + LV+ P + F YL + Sbjct: 121 DN---PPVAAAFTDPRRFGRIRLVDCPGADIRKHSPLKENGPDPVVDVDVFTEAYLAGKM 177 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q ++GIGN E L++A+L P + S + +L + Sbjct: 178 RTRHVPVKALLLDQSHISGIGNWVADEVLYQARLHPEQYCDSFDVAE------VARLYEA 231 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK--TGEPCLSNCGQMIRRIVQAG 278 ++ V A+D G S F + GK G G I + G Sbjct: 232 VRYVCQTAVDKLGDSDEFPADW-----LFNYRW---GKGSKGAASALPNGDKIAFVTVGG 283 Query: 279 RSTFYCTYCQK 289 R++ Y QK Sbjct: 284 RTSCYAPARQK 294 >gi|254382780|ref|ZP_04998137.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] gi|194341682|gb|EDX22648.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] Length = 268 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 99/286 (34%), Gaps = 19/286 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF +A G+++ K+L +E Sbjct: 1 MPEGHTIHRLAQDHTERFAARPVRVSSPQGRFADS---AALLDGRELESAEAHGKHLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 L G+ I +HLG+ G P + V + L N + R G Sbjct: 58 L-GDAWIHIHLGLFGKLGFGPAPA-----PPATDTVRLRLLNADHYADLR---------G 102 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 103 PTACALIGEGEKKAIHDRLGPDPLRPGDDPDRAWRRVSRSRTTVAALLMDQKVIAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R + L + L+ L + + Sbjct: 163 YRAEVLFRHGIDPYRLGKDLTRAEWDALWADLVLLMREGVRNNRIDTVRDEHLPEAMGRP 222 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 223 PRVDDHGGEVYVYRRANMPC-HICGDEIRTAGLAARNLFWCPGCQR 267 >gi|290956988|ref|YP_003488170.1| DNA glycosylase [Streptomyces scabiei 87.22] gi|260646514|emb|CBG69611.1| putative DNA glycosylase [Streptomyces scabiei 87.22] Length = 284 Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 115/292 (39%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + L R +LR P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGQM-----LSRSDLR--VPKYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + S + P H I T YR+ Sbjct: 54 LTRVEGGLTLHSHLRMDGSWKVY-ASGERWRGGPTHQIRAILGTTERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++L+ T+ +++ + + L + L ALL+Q+ +AGI Sbjct: 107 --PVLELMRTADEHRAVGHLG-PDLLGPDWDPELALANLLGDPGRALGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +++P +L L K + E + Sbjct: 164 GNVYKSELCFLLRVTPWIPVGALPAEVAARLPDLAKKVLEANR---------------DR 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 I + G+ ++ VYG+ PCL C +R Q R T++C CQ Sbjct: 209 PIRNTTGHRRHDLFVYGRAPRPCL-RCHTPVRAADQGDGSRERPTYWCPTCQ 259 >gi|296268041|ref|YP_003650673.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296090828|gb|ADG86780.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 292 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 114/292 (39%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L TV + AA G+ I V R K+L Sbjct: 1 MPELPEVEALAAFLRARAGGRTVAGADVVAVQALKTVNPP-PAALVGRAITGVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +E L ++ HLG SG A+ + P V +S + + Sbjct: 60 DLE-CEGLHLVAHLGRSGRLRWRDDLTGARPARSGRGPLAARVRLSPDPEGRAPGFELHE 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 PR+ + +V + P + LG +P + F L + +K L +Q++ Sbjct: 119 AGPRKRLALYVV--HDPAEVPGIAGLGIDPLSDGFTVARLREIVRAGCTQVKGLLRDQRL 176 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++GIG+ Y E L A+LSP + SL + + L I VL +A+ + Sbjct: 177 ISGIGDAYSDEILHAARLSPFKLADSLTDDQ------VAALHSAIVTVLGEAVAEARALA 230 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + V+G+TGE C CG IR + A + YC CQ Sbjct: 231 AERPEPH-----PRLRMRVHGRTGEAC-HACGDTIREVSFADSALQYCPTCQ 276 >gi|169631801|ref|YP_001705450.1| putative DNA glycosylase Nei [Mycobacterium abscessus ATCC 19977] gi|169243768|emb|CAM64796.1| Putative DNA glycosylase Nei [Mycobacterium abscessus] Length = 254 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 98/289 (33%), Gaps = 35/289 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T + P + G+++ V R K+L Sbjct: 1 MPEGDTVFRTAKLLDDALGGRILTGCDIR-------VPRFATVDLSGQRVEGVIARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G I HL M GS+ I ++ + LT + + Sbjct: 54 FIRVGGAS-IHSHLKMDGSWRIMPAGRP---GPTWNHRIRAVLTTDDS-------VAVGT 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +D+V+ + + + + + + L ALL+Q+++AGI Sbjct: 103 SLGILDVVDRRREGDVVGHLG-PDLLGTDWDPDVAVERLIARSDEALSAALLDQRVMAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A L P L G + + ++ D Sbjct: 162 GNVYSNELCFLAGLLPTTAVGRLGDPAGLVERAHTLMHANKDSYRR-------TTTGDPR 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG I R R ++C CQ+ Sbjct: 215 SG--------RELWVYGRHGKPC-RRCGTPIARDQGLPRVAYWCPNCQR 254 >gi|119194501|ref|XP_001247854.1| hypothetical protein CIMG_01625 [Coccidioides immitis RS] Length = 416 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 108/310 (34%), Gaps = 41/310 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE---------HTSCAKPIKNPQHNHVTISLTNNT 107 KY + + ++H GM+G I+ P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEDDGPWPPKFWKFQLVMDDDK 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKK 163 K + D RR G + LV+ + P +L KK Sbjct: 121 ---KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVIDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + + L + Sbjct: 178 KVPIKALLLDQSIISGLGNWMADEVLYHSQIHPEQTSNT--------------LDDSQIR 223 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGR 279 L AI ++ D + G F + ++ + EP G + I GR Sbjct: 224 ELNSAIHYVCATSVDLL---GDSARFPADWLMHHRWNKGKKEPSKMLNGDPVTFITVGGR 280 Query: 280 STFYCTYCQK 289 ++ QK Sbjct: 281 TSAIVPAVQK 290 >gi|153003378|ref|YP_001377703.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026951|gb|ABS24719.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP++E+ + ++ + + L LR P AA GK++ DV R K Sbjct: 1 MPELPDIEVYVEAIAARVRARPLLRVRLGSPFVLRSVDPPLGEAA--GKRVEDVRRVGKR 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +++ LEG+L + +HL ++G + + + T + Sbjct: 59 IVLALEGDLFLALHLMIAGRLHWREAGAKL---PGRVGLAALDFEDGT----LVLTEAGT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +R + LV + + P AD ++N LK AL + +++G Sbjct: 112 KRRAAIHLVRGAAALAALDRGGIEPLDAD----LAAFRAALTRENHTLKRALTDPSLLSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L RA+LSP++ T L L +L + VL + D Sbjct: 168 IGNAYSDEILHRARLSPVKLTSRLTDEE------LARLHAATRAVLTEWTDRLRREA--A 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 220 GGFPEGVTAFREEMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|313898751|ref|ZP_07832286.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] gi|312956635|gb|EFR38268.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] Length = 273 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 108/295 (36%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ + + + +F F P + + K + V R Sbjct: 1 MIELPEARTIAADLRKEVLGKTIQSVSGNFTDHKFTFYYGNPDTYHDRLKNKAVTAVVER 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + Y+ +E + + G + + + K + + + T+ + +Y Sbjct: 61 SFYVELE-IEDEVLTFRDGANIRWFAKPQQFKK-------SKLLLMFTDGSCLHVTTSMY 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQK 175 F E + Y + +L+ H+ ++K L ++ Sbjct: 113 AAIHVFP---KTEGAQDAYYEAELKSCSLLDECFTYDNFLSKLHHETEKLSVKAFLATKQ 169 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + L+ A L P RK +L ++ + L +++ L + GG Sbjct: 170 RFIGIGNGVCQDILFYAGLHPKRKMNTLTKDE------INTLFFSMKQTLQQMVQEGGR- 222 Query: 236 LRDYVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +I G G + S + K G CG I++ G S +YC +CQK Sbjct: 223 -DSEKNIYGEKGGYHCVMSAGHYKDG---CPKCGGRIQKEQYLGGSIYYCPHCQK 273 >gi|89893499|ref|YP_516986.1| hypothetical protein DSY0753 [Desulfitobacterium hafniense Y51] gi|89332947|dbj|BAE82542.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 349 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 103/292 (35%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + R L +KN + + K +F P + A G +I Sbjct: 69 MLELPEVLTLVRQLNESVKNRRIRKVWPPTKAHKFCWYNGEPEEYDKALSGSRIAGAEGF 128 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + + V+ G++ + K P + + + L + +++ Sbjct: 129 GTFAELIFDNGRKLCVNDGVNLRLM-------PAGKVPGNYQLMMELDDGQ-----ALVF 176 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G + + + Y R A + K + K L ++ Sbjct: 177 TVAMYGGIFEHDGSYDNHYYLASRNSTSPFAQDFPAYYLRLFSESKPTLSAKAFLATEQR 236 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 GIGN + + L+ A + P RK +L Q KL+Q + KVL D GG Sbjct: 237 FPGIGNGTLQDILFEAGIHPKRKIGTLEQWERD------KLLQAVMKVLNDMTKHGGRDT 290 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S G C CG I + G S ++C CQ Sbjct: 291 E--KDLFGVFGGYKTKMSK-NTAGTNCG-QCGGTILKENYLGGSVYFCPECQ 338 >gi|317121268|ref|YP_004101271.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] gi|315591248|gb|ADU50544.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] Length = 368 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 7/189 (3%) Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 + L + + + V + LRTLGPEP F A L + Sbjct: 176 RVYLLSKSPFSRRAVSGRARDTADRETELRHREDALPEGLRTLGPEPLSRRFTAAELARR 235 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + +K+ LL+Q+ VAG+GNIY EAL+RA++ P R L + +L++ Sbjct: 236 LAGRRAPVKSLLLDQRAVAGVGNIYADEALFRARIHPARPAGELSPAE------VARLVR 289 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 +++VL +A+ AGG++ DY G G F + YG+ GEPCL CG I + GR Sbjct: 290 ALRRVLREAVAAGGTTFSDYRDGLGREGRFARRLAAYGRQGEPCL-RCGTPIATLRLGGR 348 Query: 280 STFYCTYCQ 288 + +C CQ Sbjct: 349 TAHFCPRCQ 357 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATR 46 MPELPEVE +RR+L ++ + + + R + + P A Sbjct: 1 MPELPEVETVRRDLERHLEGAWIAGVRVLRPDVVVGATPPALERAIV 47 >gi|15610433|ref|NP_217814.1| endonuclease VIII [Mycobacterium tuberculosis H37Rv] gi|15842888|ref|NP_337925.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31794477|ref|NP_856970.1| endonuclease VIII [Mycobacterium bovis AF2122/97] gi|121639186|ref|YP_979410.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639220|ref|YP_979444.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663160|ref|YP_001284683.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148824499|ref|YP_001289253.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|167968929|ref|ZP_02551206.1| endonuclease VIII nei [Mycobacterium tuberculosis H37Ra] gi|215405310|ref|ZP_03417491.1| endonuclease VIII nei [Mycobacterium tuberculosis 02_1987] gi|215413175|ref|ZP_03421876.1| endonuclease VIII nei [Mycobacterium tuberculosis 94_M4241A] gi|215428783|ref|ZP_03426702.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|215447604|ref|ZP_03434356.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|218755079|ref|ZP_03533875.1| endonuclease VIII nei [Mycobacterium tuberculosis GM 1503] gi|219559358|ref|ZP_03538434.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|224991679|ref|YP_002646368.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253800340|ref|YP_003033341.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|254233906|ref|ZP_04927231.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|260188345|ref|ZP_05765819.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|260202459|ref|ZP_05769950.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|260206649|ref|ZP_05774140.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289444879|ref|ZP_06434623.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289448986|ref|ZP_06438730.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289555575|ref|ZP_06444785.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289571524|ref|ZP_06451751.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289576017|ref|ZP_06456244.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289747115|ref|ZP_06506493.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289751993|ref|ZP_06511371.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289759441|ref|ZP_06518819.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|289763485|ref|ZP_06522863.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|294993762|ref|ZP_06799453.1| endonuclease VIII nei [Mycobacterium tuberculosis 210] gi|297635951|ref|ZP_06953731.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] gi|297732948|ref|ZP_06962066.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN R506] gi|298526773|ref|ZP_07014182.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777626|ref|ZP_07415963.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|306782348|ref|ZP_07420685.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|306786170|ref|ZP_07424492.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|306790538|ref|ZP_07428860.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|306795059|ref|ZP_07433361.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|306799256|ref|ZP_07437558.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|306805105|ref|ZP_07441773.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|306809292|ref|ZP_07445960.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|306969394|ref|ZP_07482055.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|306973746|ref|ZP_07486407.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|307081456|ref|ZP_07490626.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|307086058|ref|ZP_07495171.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|313660280|ref|ZP_07817160.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN V2475] gi|54037059|sp|P64157|Y3325_MYCBO RecName: Full=Putative DNA glycosylase Mb3325; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb3325; Short=Putative AP lyase Mb3325 gi|54041001|sp|P64156|Y3297_MYCTU RecName: Full=Putative DNA glycosylase Rv3297/MT3396; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv3297/MT3396; Short=Putative AP lyase Rv3297/MT3396 gi|1877352|emb|CAB07061.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium tuberculosis H37Rv] gi|13883220|gb|AAK47739.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31620073|emb|CAD95417.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium bovis AF2122/97] gi|121494834|emb|CAL73315.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121494868|emb|CAL73351.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599435|gb|EAY58539.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|148507312|gb|ABQ75121.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148723026|gb|ABR07651.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|224774794|dbj|BAH27600.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253321843|gb|ACT26446.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|289417798|gb|EFD15038.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289421944|gb|EFD19145.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289440207|gb|EFD22700.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289540448|gb|EFD45026.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289545278|gb|EFD48926.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289687643|gb|EFD55131.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289692580|gb|EFD60009.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289710991|gb|EFD75007.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|289715005|gb|EFD79017.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|298496567|gb|EFI31861.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214047|gb|EFO73446.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|308325098|gb|EFP13949.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|308329319|gb|EFP18170.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|308333150|gb|EFP22001.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|308336837|gb|EFP25688.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|308340670|gb|EFP29521.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|308344404|gb|EFP33255.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|308348408|gb|EFP37259.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|308353245|gb|EFP42096.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|308356985|gb|EFP45836.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|308360841|gb|EFP49692.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|308364526|gb|EFP53377.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|323718166|gb|EGB27348.1| endonuclease VIII nei [Mycobacterium tuberculosis CDC1551A] gi|326902475|gb|EGE49408.1| endonuclease VIII nei [Mycobacterium tuberculosis W-148] gi|328460074|gb|AEB05497.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] Length = 255 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 93/289 (32%), Gaps = 34/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAATLRRHLAGRTLTRCDIR-------VPRFAAVDLTGEVVDEVISRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M GS+ + + + I L N + RV+ D Sbjct: 54 FIRTGTAS-IHSHLQMDGSWRVGNRPV------RVDHRARIILEANQQEQAIRVVGVDLG 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +D + AD+ + + + ALL+Q+++AGI Sbjct: 107 LLEVIDRHNDGAVVAHLG----PDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAGI 162 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + + P ++ L + Sbjct: 163 GNVYCNELCFVSGVLPTAPVSAVADPRRLVTRARDMLWVNRFRWNRC------------T 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+ C CG +I R ++C CQ+ Sbjct: 211 TGDTRAGR---RLWVYGRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|326789510|ref|YP_004307331.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] gi|326540274|gb|ADZ82133.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] Length = 275 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 108/294 (36%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + + L + ++ + K +F P ++AA +G ++I V Sbjct: 1 MLELPEVLTVSKQLKNHIVGKKISKVLPPSKVHKFCWYNGEPTEYNAAIKGSEVISVEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I + ++ G++ + + + I L +N +++ Sbjct: 61 GIFVEITFSNGYKLCLNDGVNVRLVPSNEKTKNF-------QLLIELEDN-----LVLVF 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G + Y + ++ + T K N + K L Q+ Sbjct: 109 TVAMYGGIFLHDGSYDNEYYLKSKQAISPFSEVFTEHYHKTFMESKPNLSAKAFLATQQR 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 G+GN + L+ A + P RK + + + +L+ ++ VL + + GG Sbjct: 169 FPGVGNGVSQDILFEAGIHPKRKISTFSEADK------ERLLGKMITVLNEMVQKGGRDT 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +I G G ++ S K G C CG I + G S +YC CQ Sbjct: 223 E--KNIFGEKGGYKVRMS---KNTMGLDC-PKCGGKIIKETYLGGSIYYCAQCQ 270 >gi|88855146|ref|ZP_01129811.1| DNA glycosylase [marine actinobacterium PHSC20C1] gi|88815674|gb|EAR25531.1| DNA glycosylase [marine actinobacterium PHSC20C1] Length = 332 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 108/332 (32%), Gaps = 54/332 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + + + RF + G +++ K + Sbjct: 1 MPEGHSVHRIARQFALHFVGK---HVAVSSPQGRF---AAGAERIDGLRMLSAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNN----T 107 +E E + + VHLG+ G++ + + + QH V ++ Sbjct: 55 FLEFEHDRWLRVHLGLYGAWDFAGNFTADATTASAAGRMGQTNQHGTVVGEHEDSLASIG 114 Query: 108 NTKKYRVIYNDP-------------------------------RRFGFMDLVETSLKYQY 136 ++ R+ ++ R +++ Sbjct: 115 APRRTRLRMSEQEKASDELSDFPPEPIGAVRVRLLTENTCADLRGPTACEVLTPDEVQIA 174 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P +N KK + + L++Q +V+GIGN+Y E L+RA+L P Sbjct: 175 LNKLGPDPLVDENGEAEERFVATVRKKQTAIGLQLMDQSVVSGIGNVYRAEILFRARLDP 234 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + + + + + EI + G + +Y + + VY Sbjct: 235 HTPGKLIAEELLRELWRDWARLLEIGVTTGQMMTMEGLTSDEYTAA---LANRADRHWVY 291 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G PC CG I + A R ++C CQ Sbjct: 292 HREGLPC-RVCGTNIVMELAASRKLYWCPNCQ 322 >gi|326776189|ref|ZP_08235454.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326656522|gb|EGE41368.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 306 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 110/319 (34%), Gaps = 49/319 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHEALAGQVLT-----RSDLR--VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + P H + L N +T Sbjct: 54 LTRFEGGLTLHSHLRMDGAWRVYGP-HERWRGGPGH-QIRAILANAEHT-------AVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++L+ TS + + + L L ALL+Q+ +AGI Sbjct: 105 RLPVLELLRTSEEDRAVGHLG-PDLLGPDWDPGRALDRLLTAPERPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + A+++P +L L + + + S LR Sbjct: 164 GNVYKCELCFLARVTPWLPVGALPDGALLRLVTLAERLLYANRDRPTRTTTITSELRTPR 223 Query: 241 HIDGSIG-------------------------------YFQNAFSVYGKTGEPCLSNCGQ 269 Q VYG+ PCL CG Sbjct: 224 PPPPGPEAEAKAGAEAHAGAGAERPRSRAAPRPARPPVRVQERLYVYGRARRPCL-RCGT 282 Query: 270 MIRRIVQAGRSTFYCTYCQ 288 IR Q R T++C CQ Sbjct: 283 PIRLTDQDDRPTYWCPGCQ 301 >gi|313807891|gb|EFS46372.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA2] Length = 256 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LLNQ Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLNQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPLPP 255 >gi|226326881|ref|ZP_03802399.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] gi|225204718|gb|EEG87072.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] Length = 116 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL L+ I++VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKANSLTSEESEV------LVTAIKRVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ +PCL CGQ I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKPCL-ICGQPIESIKQGQRSTFFCRHCQ 110 >gi|258652623|ref|YP_003201779.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] gi|258555848|gb|ACV78790.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] Length = 288 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 73/309 (23%), Positives = 119/309 (38%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR L + + D+ H + P +A G+ RR K Sbjct: 1 MPELPEVESARRVLADGALHRRIADVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGKS 60 Query: 60 LLIE-------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTIS 102 + + G+ + +HLGMSG ++ S + + Sbjct: 61 MWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDREQ 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR--TLGPEPADNSFNAIYLTHQF 160 + +++ V + D R +D S P ++ + +T Sbjct: 121 FVDRGAYQRFAVTFADGGRMRLLDPRRLSRVRLDPDIQALGPDALGLSPTAFRTAMTAGR 180 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K LL+Q ++AG+GN+ EALWRAK++P R +L L +L + Sbjct: 181 RVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQ------LNRLGRA 234 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +Q L DAI GG D + K+G C CG + V GR+ Sbjct: 235 VQSALTDAIARGGVHTGDVIAA--------------RKSGARC-PRCGGAMVSGVVGGRT 279 Query: 281 TFYCTYCQK 289 T++C+ Q+ Sbjct: 280 TWWCSKEQR 288 >gi|297202801|ref|ZP_06920198.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713889|gb|EDY57923.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 284 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + +T R +LR P + +A G++++DV+ R K+L Sbjct: 1 MPEGDTVWQAAKRLHTALADKVLT-----RSDLR--VPKYATADLTGRRVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I + YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGSWKVY-AENQRWTGGPTHQIRAILANTDRTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++L+ T+ +++ + L + L ALL+Q+ +AGI Sbjct: 107 --PVLELLRTTDEHKAVGHLG-PDLLGPDWDPERALANLLRDPARPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL-YKLIQEIQKVLIDAIDAGGSSLRDY 239 GN+Y E + +P +L + L KL++ + + + Sbjct: 164 GNVYKSELCFLLGATPWLPVGALPADRAAQLPALAKKLLEANRDRPVRS----------- 212 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL C +R Q R T++C CQ Sbjct: 213 -----TTGRRGQDLFVYGRAPRPCL-RCRTSLRVADQGDGSRERPTYWCPTCQ 259 >gi|289428678|ref|ZP_06430361.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|295130990|ref|YP_003581653.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|289158076|gb|EFD06296.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|291377097|gb|ADE00952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|313773587|gb|EFS39553.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313811638|gb|EFS49352.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313822218|gb|EFS59932.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823549|gb|EFS61263.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313831379|gb|EFS69093.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834991|gb|EFS72705.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|314924612|gb|EFS88443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314962024|gb|EFT06125.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314974254|gb|EFT18350.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976741|gb|EFT20836.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314978881|gb|EFT22975.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314984442|gb|EFT28534.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|314986460|gb|EFT30552.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990819|gb|EFT34910.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315081315|gb|EFT53291.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315083516|gb|EFT55492.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087197|gb|EFT59173.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089370|gb|EFT61346.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|315095394|gb|EFT67370.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|327328344|gb|EGE70106.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327329790|gb|EGE71546.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|327444128|gb|EGE90782.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444992|gb|EGE91646.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327446475|gb|EGE93129.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] gi|328752231|gb|EGF65847.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|328760096|gb|EGF73675.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] gi|332675869|gb|AEE72685.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 256 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPLPP 255 >gi|254552399|ref|ZP_05142846.1| endonuclease VIII nei [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 255 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 93/289 (32%), Gaps = 34/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAATLRRHLAGRTLTRCDIR-------VPRFAAVDLTGEVVDEVISRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M GS+ + + + I L N + RV+ D Sbjct: 54 FIRTGTAS-IHSHLQMDGSWRVGNRPV------RVDHRARIILEANQQEQAIRVVGVDLG 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +D + AD+ + + + ALL+Q+++AGI Sbjct: 107 LLEVIDRHNDGAVVAHLG----PDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAGI 162 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + + P ++ L + Sbjct: 163 GNVYCNELCFVSGVLPTAPVSAVADPRRLVTRARDMLWVNRFRCNRC------------T 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+ C CG +I R ++C CQ+ Sbjct: 211 TGDTRAGR---RLWVYGRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|313819676|gb|EFS57390.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] Length = 256 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPRGGLAGAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPLPP 255 >gi|88807777|ref|ZP_01123288.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] gi|88787816|gb|EAR18972.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] Length = 200 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 14/203 (6%) Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPE 145 +H V + + + + D R FG M V ++ L+ LGPE Sbjct: 9 PTQTDPCRHTRVRLWNEQG-----HELRFVDMRSFGEMWFVPQNVPIDSVITGLQRLGPE 63 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P FNA YL + +K ALL+Q +VAG GNIY E+L+ + ++P RK L Sbjct: 64 PFSEEFNATYLQQKLRGSTRTIKAALLDQAVVAGAGNIYADESLFASGIAPHRKAGELRL 123 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 L +L + VL +I AGG++ D+ ++G G + SVY +TG+PCL Sbjct: 124 AE------LERLCISLVHVLEISIGAGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPCL- 176 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQ 288 CG I R GRS+ +C+ CQ Sbjct: 177 VCGNPIERKRLGGRSSHWCSECQ 199 >gi|302539955|ref|ZP_07292297.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457573|gb|EFL20666.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 262 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 111/289 (38%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + + LR G++ R K+ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRIERVEVADPAVLRGVTAQRLKRELEGRRFAAPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ G ++I+H GM+G + + V ++L + +++ Y+D Sbjct: 61 LIA-PAGGPTLILHFGMTGGLVCRSEGDP----PERFGRVVLTLDDG-----HQLRYHDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L T + L + L +Q +VAG Sbjct: 111 RKLRGLWLATTDADVDRILGEQGPDALSLGRAELDSLLEGRRGRVKAT---LTDQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA++ P +T L + L +L ++ VL ++ AG R Sbjct: 168 LGNLLGDEILWRARVHPKSRTSDLGPDE------LRRLHTALRGVLSTSVRAGQVPPR-- 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + +P CG+ +RR AGR++ +C CQ Sbjct: 220 ----------ASWLTGHRDDPDPHCPRCGRPLRRGKIAGRTSTWCPRCQ 258 >gi|330469897|ref|YP_004407640.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] gi|328812868|gb|AEB47040.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] Length = 270 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 105/290 (36%), Gaps = 30/290 (10%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R + + RF +A G + K+LL Sbjct: 4 PEGHTIHRLAARHAELFVGDKVLATSPQGRF---AEGAALLSGSVLEQTKAYGKHLLHHY 60 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 G + VHLG+ G H +P+ + + L T ++ + P Sbjct: 61 AGERILHVHLGLYGKVTDGHGEPPEPV-----GQIRLRL----ATDRHWLDLRGPTACEL 111 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + E + LGP+P + + + ++ L LL+Q +VAG G I+ Sbjct: 112 LTPPEAAALRA-----RLGPDPLRADADPQRAYARISRSSTPLAALLLDQSVVAGTGLIF 166 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 V EAL+RA LSP R L + L ++ +++ A+ G H+ Sbjct: 167 VTEALFRAGLSPTLPGRELTRAGWD------ALWVDLVELMTLAVGTGRIDTVRAEHLPE 220 Query: 245 SIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + +PC C I R A R+ ++C CQ Sbjct: 221 AMGRPARVDRHGGEVYVYRRPDQPC-HVCATPISRGTIAARNLYWCPTCQ 269 >gi|325262240|ref|ZP_08128978.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] gi|324033694|gb|EGB94971.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] Length = 273 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 110/292 (37%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV I L + V ++ K +F P ++AA G+K++ Sbjct: 1 MLELPEVLTISSQLRDAVLGKIVREVLPPVKAHKFCWFNGDPAEYNAALEGRKVVSSEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y I E L + + G++ + K P++ + I L ++T +++ Sbjct: 61 GIYAEIIFEEGLRLCFNDGVNVRLL-------PLKKVPKNYQLLIVLDDDT-----ALVF 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G + E Y R + + + K ++K L + Sbjct: 109 TVAMYGGIIVHREDYCNEYYEKSRQAVSPFSPEFEFQFHKMLEECKPGISVKALLAADQH 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 GIGN + + L+ A++ P RK ++L + +L+ VL + + GG Sbjct: 169 FPGIGNGVLQDILFEARIHPKRKLQTLNEEEK------KRLLCCTVGVLQEITEKGGRDT 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ S EPC CG I + G S +YC CQ Sbjct: 223 E--KDLFGNPGGYKTKLSK-NTWKEPC-PVCGGAITKEAYMGGSVYYCPVCQ 270 >gi|325916140|ref|ZP_08178427.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537684|gb|EGD09393.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 177 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 9/181 (4%) Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + +NDPRRFG L+ S Q+ L LGPEP +F YL + + +K Sbjct: 6 ENGRVLRFNDPRRFG--CLLWQSDTQQHELLAALGPEPLSQAFTGDYLYALSRGRRAAVK 63 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L++Q +V G+GNIY E+L RA +SP+R+ + L ++ +L A Sbjct: 64 TFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLER------YRSLATAVKDILGYA 117 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GG++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R+T +C +CQ Sbjct: 118 IQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQRATVWCGHCQ 176 Query: 289 K 289 + Sbjct: 177 R 177 >gi|301345445|ref|ZP_07226186.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595026|ref|ZP_07240034.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 202 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 19/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGSF + + + +H+H+ I + + Y+DPRRFG + + + Q Sbjct: 1 MSGSFRLCQPND----ELRKHDHLIIQFEDQQ------LRYHDPRRFGCILWLNP--ETQ 48 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + TLGPEP + F+A YL + K+ +K AL++ +V G+GNIY E+L+ + Sbjct: 49 GKLIDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH 108 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + L + KL+ EI+++L AID GGS+LRDY + G GYFQ Sbjct: 109 PAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLA 162 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 YGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 194 >gi|48243750|gb|AAT40850.1| putative formamidopyrimidine-DNA glycosylase [Haemophilus influenzae] Length = 116 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 7/120 (5%) Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L++ +V G+GNIY E L+ L P + SL + +L+++I++VL +AI Sbjct: 3 FLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSNAI 56 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++L+D++ DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 57 QQGGTTLKDFLQPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 115 >gi|126436180|ref|YP_001071871.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] gi|126235980|gb|ABN99380.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] Length = 268 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 104/288 (36%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G+ S K+L Sbjct: 1 MPEGHTLHRLARLHQKRYKGQRVRVSSPQGRF---AEGAAMVDGRTFTGASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G I VHLG+ G F S P +P V + + + + R G Sbjct: 58 YRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRMRMVGDGHGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P + + ++ + L++Q ++AG+GN+ Sbjct: 108 PTACEIVDEAQVSDILARLGPDPLRRDADPAPAWTRLNRSRRPVGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R +L + ++ +++ + G Sbjct: 168 YRSELLYRHRIDPYRLGTNLEPGEFD------AMWTDLVELMKVGVRRGKIVTVRPEDDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + EPC CG + V GR+ F+C CQ+ Sbjct: 222 GAPSYRTGRPRTYVYRRALEPC-RICGTPVNTAVLEGRNLFWCPTCQR 268 >gi|307328128|ref|ZP_07607308.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] gi|306886247|gb|EFN17253.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] Length = 262 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 109/290 (37%), Gaps = 32/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + + + G++ R K+ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRVERVEVADAGVLHGVTAQRLKRDLEGRRFAAPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +++VH GM+G A+ + V L + +R+ Y D Sbjct: 61 LIA-PTDGPTVVVHFGMTGRL----ACGAESEPAGRFERVAFDLDDG-----HRLGYEDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L T + + + + +K L +Q ++AG Sbjct: 111 RKLQGIWLAATEADVDRILGDQGPDALSLSRADLD---RLLAGRRGRVKATLTDQAVIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA++ P R +L + +L +++VL ++ G D Sbjct: 168 LGNLLGDEILWRARIHPQRPANALTDDEH------ERLHTAMREVLRASV-RAGRVPDDP 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +P CG +RR AGR++ +C +CQ+ Sbjct: 221 DWLTGQRDDP-----------DPHCPRCGHPLRRGRIAGRTSLWCPHCQR 259 >gi|182435554|ref|YP_001823273.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464070|dbj|BAG18590.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] Length = 308 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 110/321 (34%), Gaps = 51/321 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHEALAGQVLT-----RSDLR--VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + P H + L N +T Sbjct: 54 LTRFEGGLTLHSHLRMDGAWRVYGP-HERWRGGPGH-QIRAILANAEHT-------AVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++L+ TS + + + L L ALL+Q+ +AGI Sbjct: 105 RLPVLELLRTSEEDRAVGHLG-PDLLGPDWDPGRALDRLLTAPERPLGEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + A+++P +L L + + + S LR Sbjct: 164 GNVYKCELCFLARVTPWLPVGALPDGALLRLVTLAERLLYANRDRPTRTTTITSELRTPR 223 Query: 241 HIDGSIG---------------------------------YFQNAFSVYGKTGEPCLSNC 267 Q VYG+ PCL C Sbjct: 224 PPPPRPEAEAKAGAEAHAGAGSGAERPRSRAAPRPARPPVRVQERLYVYGRARRPCL-RC 282 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 G IR Q R T++C CQ Sbjct: 283 GTPIRLTDQDDRPTYWCPGCQ 303 >gi|313825875|gb|EFS63589.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] Length = 256 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 22/271 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL + L+ +++ HLGMSG F + + H + I+L + + + Sbjct: 61 RGKYLWLILDDGTAMLAHLGMSGQFRVSTQHAPQHR----HTRIVITLDDGRD-----LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGP-VTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLS 265 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPLPP 255 >gi|300715872|ref|YP_003740675.1| Endonuclease VIII [Erwinia billingiae Eb661] gi|299061708|emb|CAX58824.1| Endonuclease VIII [Erwinia billingiae Eb661] Length = 250 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 32/277 (11%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 +K T+TD+ L + A G+++ + R K +L L++ H Sbjct: 2 EKAIKGKTLTDVWFAFPQL-----KTYEPALLGERVEAIETRGKAMLTHFSNGLTLYSHN 56 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 + G + + + + + + + L K ++Y+ ++L+ Sbjct: 57 QLYGVWRVAKSG----VDPATNRILRVRLAAED---KAILLYSASE----IELLNADTLM 105 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIVAGIGNIYVCEALWR 191 +P L+ +GP+ D + + + + + LL+Q +AG+GN E LW Sbjct: 106 AHPFLQRVGPDVLDMTLTSEQVKARLLSSRFRRRQFSALLLDQAFLAGLGNYLRVEILWL 165 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A L+P K + L + + AI R + G Sbjct: 166 AGLAPQHKAQDLTEEQLALLAD-----------ALLAIPRLSYLTRGVSKENKHHGAL-F 213 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +F V+ + G+PC CG +I + V + R ++C CQ Sbjct: 214 SFKVFHRAGQPC-ERCGGIIEKTVLSSRPFYWCPGCQ 249 >gi|302534414|ref|ZP_07286756.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302443309|gb|EFL15125.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 268 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 104/287 (36%), Gaps = 21/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF +A G+++ K+L +E Sbjct: 1 MPEGHTIHRLAQDHTERFAARPVRVSSPQGRF---AESAALLDGRELESAEAHGKHLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 L G+ I +HLG+ G P + V + L N + R G Sbjct: 58 L-GDAWIHIHLGLFGKLGFGPAPA-----PPATDTVRLRLLNEDHYADLR---------G 102 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + + + + + L++QK+VAG+GN+ Sbjct: 103 PTACALIGEGEKKAIHDRLGPDPLRPADDPGRAWTRISRSRTTVAALLMDQKVVAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 Y E L+R + P R R L + L L++E + L + + Sbjct: 163 YRAEVLFRHGIDPYRLGRDLTRAEWDAMWADLAALMREGMRRNRIDTVRD-EHLPEAMGR 221 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 222 PPRVDDHGGEVYVYRRANMPC-HICGGEIRTADLAARNLFWCPTCQQ 267 >gi|111018385|ref|YP_701357.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110817915|gb|ABG93199.1| probable DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 265 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 105/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVRVLSPQGRF---SEDAALVDGRVLVKSEAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G+F P+ + V + + + P+ Sbjct: 58 YESGLVVHVHLGLYGAFTESAVPMEPPVGQVRMRMVGAEFGTDLRGPTACEVLHPPQVAA 117 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + + + L++Q ++AGIGN+ Sbjct: 118 IE--------------ARLGPDPLRKDADPDKAWKRISASKTPIGALLMDQAVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++P R R+L ++ L ++ ++ + G + Sbjct: 164 YRAEVLFRHGINPDRPGRALSRDEWD------ALWADLVALMKVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG + V GR+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RICGTPVTHSVMKGRNLFWCPSCQ 263 >gi|50955599|ref|YP_062887.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952081|gb|AAT89782.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 261 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + + G+++ +V R K+L Sbjct: 1 MPEGDTVYQAADRLRRALAGRVLTATDFR-------VPAYATVDLSGQRVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G+ + HL M GS+ + + V + + Sbjct: 54 LIRVGGHS-VHSHLKMDGSWEVYPPG-GRWRHPAHQARVVLRTAEGEAVGFLLGTLDLLP 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R E + L D + A + + + + ALL+Q+ +AGI Sbjct: 112 R-------EREDEAVDDLGPNLLDPGWDAASAAEAVRRLRERPGAPVAVALLDQRALAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P R R D+ ++L+ + V Sbjct: 165 GNVYANELCFLRGMLPTRPVREADI--PAAVDLAHRLLAANRDRS--------------V 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + VYG+ G+PC CG IRR R T +C CQ Sbjct: 209 RVTTGDTRRGRTTWVYGRQGQPC-RRCGTPIRRGRLGYTELTERVTSFCPVCQ 260 >gi|319442470|ref|ZP_07991626.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium variabile DSM 44702] Length = 277 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 100/297 (33%), Gaps = 29/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L ++ + RF G + D K+L Sbjct: 1 MPEGHVIHRLATGLTTRFGG---EEVSVVSPQGRFATEASL---LDGSVLTDAEAWGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ +HLG+ G+ E + + V + + ++T R Sbjct: 55 FVHFTA-GTVHIHLGLIGTLQFEPLAVPR-------GQVRLRIADDTVAADLRGPQRCAL 106 Query: 121 RFGFMDLVETSLKYQYPPLR--TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + P P N+ + + + + L++Q + A Sbjct: 107 VTPVEEDAAVAKLGVDPLRVVGGGTPAGELNARKLETALAKTRRSSKPVGALLMDQALYA 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+G+IY E L+R + P R +SL L + ++ ++ AG Sbjct: 167 GVGSIYRTEVLFRLGIDPTRPGKSLTTAE------LDDIWSDMVDLMTYGEVAGRIDTVR 220 Query: 239 YVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + G PCL CG + AGR ++C CQ+ Sbjct: 221 PEHTPEAMGRPPRKDDHGGEVYVYRRAGLPCL-VCGTPVETGEMAGRKIYWCPVCQR 276 >gi|145225389|ref|YP_001136067.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145217875|gb|ABP47279.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 250 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 91/289 (31%), Gaps = 39/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLRDALEGRELTRCDIR-------VPRYAAVDLSGQVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M G+++I + + N+ + + Sbjct: 54 FIRVGQAS-IHSHLKMDGAWVIGRVRVPTY-----KIRIVLETANSRASGVDLGVLEVLD 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R M+ VE ++ + + L LL+Q+++AG+ Sbjct: 108 RATDMEAVEHLGPD----------LLGEDWSAEVAAANLVADPERPLAETLLDQRVMAGV 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + L P L L +V Sbjct: 158 GNVFANELSFVFGLRPGTPVGELTDPLRVANRAQQMLWLNRLRVNRT------------T 205 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ G PC CG I R T++C CQ+ Sbjct: 206 TGNTRPG---QDVWVYGRAGLPC-RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|108800564|ref|YP_640761.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119869703|ref|YP_939655.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] gi|108770983|gb|ABG09705.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119695792|gb|ABL92865.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] Length = 268 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 103/288 (35%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G+ S K+L Sbjct: 1 MPEGHTLHRLARLHQKRYKGQRVRVSSPQGRF---AEGAAMVDGRTFTGASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G I VHLG+ G F S P +P V + + + R G Sbjct: 58 YRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRMRMVGAGHGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P + + ++ + L++Q ++AG+GN+ Sbjct: 108 PTACEIVDEAQVSDILARLGPDPLRRDADPAPAWTRLNRSRRPVGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R +L + ++ +++ + G Sbjct: 168 YRSELLYRHRIDPYRLGTNLEPGEFD------AMWTDLVELMKVGVRRGKIVTVRPEDDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + EPC CG + V GR+ F+C CQ+ Sbjct: 222 GAPSYRTGRPRTYVYRRALEPC-RICGTPVNTAVLEGRNLFWCPTCQR 268 >gi|153004588|ref|YP_001378913.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] gi|152028161|gb|ABS25929.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] Length = 282 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 99/290 (34%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + RNL + V L A G+ + V+ R K+L Sbjct: 1 MPEGDTIHRAARNLHGALAGEVVIRFETVLPRLARVDEDRPVA---GRTVESVTARGKHL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+L + HL M+GS+ + + P+ + T + + Sbjct: 58 LLRFSGDLVLRTHLRMNGSWHLYRPG--ERWFRPRDAMRVLVETRPWIAVGFDL------ 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L L Q R + + + L ALL+Q+ +AG+ Sbjct: 110 -PVAELLDARGLARQRDLARLGPDLLSPAFDPPEAERRLRARADRELGEALLDQRALAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L+ A L P R SL + + + + A GGS+ Sbjct: 169 GNELKSEILFLAGLDPWRTVASLSGPELSALVATARRV----LLAAVAPFEGGSTTWLGG 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ--AGRSTFYCTYCQ 288 VYG+ G+PC CG +R Q R T++C CQ Sbjct: 225 RRTTGRSNPGERLFVYGRAGQPC-RRCGGPVRVGRQGAGARLTYHCPRCQ 273 >gi|225682725|gb|EEH21009.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb03] Length = 392 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 111/315 (35%), Gaps = 38/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ P ++ + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 + K + D RR G + LV+ P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIY-------VCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 K +K LL+Q ++GIGN E L+ AK+ P + + +L ++ + Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGLASAIIRDEILYHAKIHPEQYSNTLQESQ------I 234 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L I V ++ G+S + F + +S GK G+ I I Sbjct: 235 EQLYSAINYVCSTSVGLLGNSEEFPSNW-----LFSHRWSK-GKANHSHQLPNGEKIVFI 288 Query: 275 VQAGRSTFYCTYCQK 289 GR++ QK Sbjct: 289 TVGGRTSAIVPAIQK 303 >gi|87125640|ref|ZP_01081485.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] gi|86166940|gb|EAQ68202.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] Length = 182 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 12/190 (6%) Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTH 158 + N + + D R FG M V + L+ LGPEP FNA YL Sbjct: 1 MRFWNQAGD---ELRFVDLRSFGQMWWVPPGEAAESVITGLQALGPEPFSAEFNAKYLQT 57 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 Q ++K ALL+Q +VAG GNIY E+L A ++P + SL + L +L Sbjct: 58 QLKGSTRSIKAALLDQSLVAGTGNIYADESLHAAGIAPQIRAGSLNLDQ------LGRLR 111 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + +VL +I AGG++ D+ ++G G + SVY +TG+PC CG I R G Sbjct: 112 DALVRVLELSIGAGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPC-PRCGTAIERQKLVG 170 Query: 279 RSTFYCTYCQ 288 RST +C CQ Sbjct: 171 RSTHWCPVCQ 180 >gi|319935125|ref|ZP_08009565.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] gi|319809950|gb|EFW06333.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] Length = 275 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 107/294 (36%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPE + L + + + L +F + A G I Sbjct: 1 MIELPEALSRAKELNNALIGKKIVKVLLPTSPHKFCWFQGDVASYPAQLEGHMIKGARGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ IE + + + V+ G++ + + P+ + I + T+ +Y Sbjct: 61 GIFVEIECDQGVYMCVNDGVNMTVF------TACDEIPEKYQLAILFEDQTSLVFQVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +Y L + P + +++ + K ++K L ++ Sbjct: 115 GS----LICHHGNYENEYYLKSLEKISPISSQFTYHYFVSVLENVKPTMSIKAFLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 GIGN + + LW A L P RK SL + L Q IQ +L + I+ GG Sbjct: 171 FPGIGNGVLQDILWEASLHPKRKVNSLSKQESQQ------LFQAIQSILGEMIEQGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +I G G ++ S KT +PC C I + G + ++C CQK Sbjct: 225 E--KNIFGYFGGYRTRLS--KKTLHQPC-PRCQTPIEKANYLGGTIYFCPQCQK 273 >gi|239979455|ref|ZP_04701979.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291451324|ref|ZP_06590714.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291354273|gb|EFE81175.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] Length = 318 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 102/291 (35%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G + K+L ++ Sbjct: 1 MPEGHTLHRLAADHQEWFGGRPVRVSSPQGRFAAS---AALLDGAEFAGAEAHGKHLFLD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G+ + +HLG+ G + P + + + +T R G Sbjct: 58 FGGHGWVHIHLGLFGKV-----ARGTGAPPPPTDTIRLRITAEDAWSDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + + LGP+P + + + + L++QK+VAG+GN+ Sbjct: 104 PTACTLLTDEDKQAVHDRLGPDPLRADDTPDAAWRRISRSRTAVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P L + L ++ ++ + + H Sbjct: 164 YRAEVLFRHGIDPYTPGNRLTRATWDT------LWYDLAALMREGVRHDRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + G PCL CG+ IR A R+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRDGRPCL-VCGEQIRTASLAARNLFWCPRCQ 267 >gi|226360505|ref|YP_002778283.1| DNA glycosylase [Rhodococcus opacus B4] gi|226238990|dbj|BAH49338.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 265 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 103/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVRVLSPQGRF---AEDAALVDGRVLVKSEAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G+F P+ + V + + + P+ Sbjct: 58 YESGLVVHVHLGLYGAFTEAAVPMEPPVGQVRMRMVGAEFGTDLRGPTACEVLHPPQVAA 117 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + + + L++Q ++AG+GN+ Sbjct: 118 IE--------------ARLGPDPLRKDADPDKAWKRISASKTPIGALLMDQAVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L ++ L ++ ++ + G + Sbjct: 164 YRAEVLFRHGIDPARPGRGLSRDEWD------ALWADLVALMKVGVRRGRMHVVRPEDDH 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG + V GR+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RICGTPVAHAVMKGRNLFWCPSCQ 263 >gi|118473590|ref|YP_888944.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118174877|gb|ABK75773.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 268 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + T + + RF +AA G+ + K+L Sbjct: 1 MPEGHTLHRLARLHQRRFGRTAVVVSSPQGRF---ADGAAAVSGQIFKRATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + +HLG+ G+F + P V + + R G Sbjct: 58 YDGGRVVHIHLGLYGAFTEWPVPAELALPLPV-GQVRMRIIGAQYGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P +A + K + L++Q ++AG+GN+ Sbjct: 108 PTVCELITEPEIVDVIAKLGPDPLRPDADASLAWKRITKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P L + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYLPGTQLDAAEFD------AMWTDLVALMKVGVRRGKIVVVRPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GEPC CG +R GR+ F+C CQ Sbjct: 222 GAPSYRTGRPRTYVYRRAGEPC-RICGTPVRTAELEGRNLFWCPTCQ 267 >gi|256824011|ref|YP_003147971.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256687404|gb|ACV05206.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 314 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 112/313 (35%), Gaps = 40/313 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ V ++ L + + G+ + DV R K L Sbjct: 1 MPELPEVEGLAAALRERLEGRVVAEVALASFSALKTV-DVLPQSLHGRPVDDVRRYGKLL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH--VTISLTNNTNTKKYR----- 113 + + ++VHL +G ++ + V I+L + + Y Sbjct: 60 DL-VVDGTHVVVHLMRAGWVTWHDEVPRTRLRPGGKSPVAVRITLDDGSGMDLYEAGTRK 118 Query: 114 ---------------VIYNDPRRFGFMDLVETSLKYQYPPLRTL--GPEPADNSFNAIYL 156 + P +E+ + Sbjct: 119 GMAVYLADDPGTLEALTTLGPDAVSLRPPLESPPLVGVDTTTGEVGVTASTTPEERVAFW 178 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + +K L +Q +V+GIGN + E L A+LSP +L + + Sbjct: 179 VEALEGRRTQIKRVLRDQSVVSGIGNGWSDEILHTARLSPFVLAATLEAEE------VGR 232 Query: 217 LIQEIQKVLIDAIDA-GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L + + +VL+ A + G + D DG G V+G+TGE C CG ++R + Sbjct: 233 LAEAVHEVLVGAAERAVGRAPADLK--DGKRGG----MRVHGRTGEEC-PVCGDVVREVT 285 Query: 276 QAGRSTFYCTYCQ 288 A S YC CQ Sbjct: 286 YADSSLQYCATCQ 298 >gi|320010811|gb|ADW05661.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 273 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 105/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + +F +A G+ + V K+L + Sbjct: 1 MPEGHTIHRLAADHHERFAGRPVRVSSPQGKF---SDSAALLDGRVLTGVDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG+ + +HLG+ G P + V + L N+++ R G Sbjct: 58 FEGSAWVHIHLGLFGKL-----GFGTVPAPPPTDTVRLRLLNDSHHADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + L++QK+VAG+GN+ Sbjct: 104 PTTCALITGPEKRAIHDRLGPDPLRADEDGERAWLRIARSRVTVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R + L + + ++ ++ + + H+ Sbjct: 164 YRAEVLFRHGIDPYRAGKDLTRAEWD------AIWADLGVLMREGVRNNRIDTVRPEHLP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + + C CG IR A R+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRARQAC-HICGTEIRTADLAARNLFWCPACQ 267 >gi|227354782|ref|ZP_03839199.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165100|gb|EEI49931.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 116 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL + L+ I+ VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKASSLTEQECDV------LVNAIKAVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 110 >gi|294629356|ref|ZP_06707916.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] gi|292832689|gb|EFF91038.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] Length = 269 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 100/292 (34%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G ++ K+L + Sbjct: 1 MPEGHTIHRLAQDYAARFQGSRPTVTSPQGKF---SDAAALLTGGELTRTEAHGKHLFLR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L + T R G Sbjct: 58 FREADWVHIHLGLFGKVTFGDAPA-----PPPTDTVRLRLADTTAYVDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITGAEKQAIHDRLGPDPLRPDADPATAYARIRRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + ++ ++ D + A H Sbjct: 164 YRAEVLFRHGIDPYRPGRDITPAEW------QAMWADLVALMRDGVRANRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY +T PC CG +R A R+ F+C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRTALPC-HICGTEVRTADLAARNLFWCPTCQR 268 >gi|331695858|ref|YP_004332097.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326950547|gb|AEA24244.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 268 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 34/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR L + + + + R P ++ G + RR K Sbjct: 1 MPELPEVESARRVLE-HALDRRIVAVDDTDEWVCRPHPPGEIASVLVGGTLTAAHRRGKA 59 Query: 60 LLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + + +HLGM G ++ + +P+ + N ++ V Sbjct: 60 MWCETRDEHGDDGPHLGLHLGMGGHLVVTDADDVRAGGDPRPDGSQGRPEWN----RFTV 115 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++D D P P A L + + ++ +K LL+Q Sbjct: 116 TFDDGGELRLFDKRRLGRVRLDP--DIDALGPDAEEITAAGLRERLRRSHAPVKARLLDQ 173 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+VAGIGN+ E LW+A+++P R L + + +L + +++ L AI+ GG Sbjct: 174 KVVAGIGNLLADETLWQARIAPSRPADELDRTE------VNRLHRNLERALRSAIEKGGV 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + C CG + GRST++C+ Q Sbjct: 228 HT--------------GRVIAHRRADGAC-PRCGAPMVHGTVGGRSTWWCSAEQ 266 >gi|315445737|ref|YP_004078616.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315264040|gb|ADU00782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 250 Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 90/289 (31%), Gaps = 39/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ + + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLRDALEGRELIRCDIR-------VPRYAAVDLSGQVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M G+++I + + N+ + + Sbjct: 54 FIRVGQAS-IHSHLKMDGAWVIGRVRVPTY-----KIRIVLETANSRASGVDLGVLEVLD 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R M+ VE ++ + + L LL+Q+++AG+ Sbjct: 108 RATDMEAVEHLGPD----------LLGEDWSAEVAAANLVADPERPLAETLLDQRVMAGV 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + L P L L +V Sbjct: 158 GNVFANELSFVFGLRPGTPVGELTDPLRVANRAQQMLWLNRLRVNRT------------T 205 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ G PC CG I R T++C CQ+ Sbjct: 206 TGNTRPG---QDVWVYGRAGLPC-RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|118618117|ref|YP_906449.1| endonuclease VIII Nei [Mycobacterium ulcerans Agy99] gi|118570227|gb|ABL04978.1| endonuclease VIII Nei [Mycobacterium ulcerans Agy99] Length = 254 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 96/292 (32%), Gaps = 41/292 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAARLRQYLAGKTLTRCDIR-------VPRFATVDLTGQVVEEVQSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M GS+ + +P + H + + + I Sbjct: 54 FIRTALVS-IHSHLKMDGSWRVGD----RPPRVDHHARIILEAND---------IRAVGV 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++L+E + ++ I + + + ALL+Q+++AGI Sbjct: 100 DLGVLELLERDNEGAVVAHLG-PDLLGEDWDPHIAAANLAADPHRCIAEALLDQRVLAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P + + L + ++ D Sbjct: 159 GNVYCNELCFVSGHLPTAPVSDVAKPLRLVTRAREMLWANRLRWNR-------TTTGDTR 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQK 289 VYG+ G+PC C I R G R ++C CQ+ Sbjct: 212 AG--------RQLWVYGRAGQPC-RRCATGIERQGPDGSSERVRYWCPACQR 254 >gi|295838891|ref|ZP_06825824.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295827240|gb|EDY42376.2| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 271 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 105/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRATSPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT R G Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGAAPPPTDTIRLRLTGPGGWSDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 104 PTACALIDDEAKAALHARLGPDPLREADDGEAAWTRIARSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y EAL+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEALFRHGIDPDRPGRSLTRTEWD------ALWADLRALMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + +PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHQPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|256787746|ref|ZP_05526177.1| DNA repair hydrolase (fragment) [Streptomyces lividans TK24] gi|289771633|ref|ZP_06531011.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] gi|289701832|gb|EFD69261.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] Length = 280 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 99/298 (33%), Gaps = 31/298 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R T + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAQDCTAAFARTAVRVTSPQGKFADS---AALLDGTVLTTADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSC------AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + + +++ H P + V + L N+T R Sbjct: 58 FGAAGNAAEDAAENPAWVHIHLGLFGKVAFGPVPAPPPTDTVRLRLANDTAHVDLR---- 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + LGP+P + + + + + L++QK++ Sbjct: 114 -----GPTTCALITDPEKRAIHDRLGPDPLRPDADPAAAHRRISRSRTTIAALLMDQKVI 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+Y E L+R + P R + L + Q++ ++ + + Sbjct: 169 AGVGNVYRAEVLFRHGIDPYRPGKDLTPAEWDT------IWQDLTALMREGVRNNRIDTV 222 Query: 238 DYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PC CG I A R+ F+C CQK Sbjct: 223 RPEHTPEAMGRPPRVDDHGGEVYVYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|282854733|ref|ZP_06264068.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] gi|282582315|gb|EFB87697.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] Length = 272 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 105/292 (35%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + + + + RF +A G + K+L Sbjct: 1 MPEGHVIHRLANAIDSAFAG---SRVEVTSPQGRF---AESAAMLDGTVLTSAQAWGKHL 54 Query: 61 LIELEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +++ + + +HLG+ G + T P V + +T+ R Sbjct: 55 VVDFDNHRPDHLLHIHLGLIGKLAVGPT-------VPVVGQVRLRITDGVTAADLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 P+ ++ E T+GP+P + ++ + + + + + LL+Q++ Sbjct: 104 GPQTCELINDDEWGTVAA-----TIGPDPIRDDADSDVAWDKVRRSSRRISDVLLDQRVA 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+R ++ P + + + ++ Sbjct: 159 AGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTP 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 219 EAMGRPPRVDRHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|21221083|ref|NP_626862.1| DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] gi|20520840|emb|CAC10002.2| putative DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] Length = 280 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 99/298 (33%), Gaps = 31/298 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R T + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAQDCTAAFARTAVRVTSPQGKFADS---AALLDGTVLTTADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSC------AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + + +++ H P + V + L N+T R Sbjct: 58 FGAAGNAAEDAAENPAWVHIHLGLFGKVAFGPVPAPPPTDTVRLRLANDTAHVDLR---- 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + LGP+P + + + + + L++QK++ Sbjct: 114 -----GPTTCALITDPEKRAIHDRLGPDPLRPDADPAAAHRRISRSRTAIAALLMDQKVI 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+Y E L+R + P R + L + Q++ ++ + + Sbjct: 169 AGVGNVYRAEVLFRHGIDPYRPGKDLTPAEWDT------IWQDLTALMREGVRNNRIDTV 222 Query: 238 DYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PC CG I A R+ F+C CQK Sbjct: 223 RPEHTPEAMGRPPRVDDHGGEVYVYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|254821431|ref|ZP_05226432.1| hypothetical protein MintA_15951 [Mycobacterium intracellulare ATCC 13950] Length = 268 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 106/289 (36%), Gaps = 24/289 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVSVSSPQGRF---ADAAAAVDGRVLQRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 G + VHLG+ G+F E + + + + + Sbjct: 58 YAGGPIVHVHLGLYGAFTEWERPDDGSFPEAVGQVRMRMIGADYGTDLRG---------- 107 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 L LGP+P + + + K + L++Q ++AG+GN Sbjct: 108 -PTVCEVIDEGQVSDVLARLGPDPLRGDADPSWAWKRIAKSRRPIGALLMDQTVMAGVGN 166 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 +Y E L+R + P R R + ++ I ++ ++ + G + H Sbjct: 167 VYRSELLYRHGIDPFRPGRDVGEDEFDAAWI------DLVALMKVGLRRGKIIVVRPEHD 220 Query: 243 DGSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY ++GEPC C IR V GR+ F+C CQK Sbjct: 221 HGAPSYRPDRPRTYVYRRSGEPC-RVCKAPIRTTVLEGRNVFWCPTCQK 268 >gi|183981259|ref|YP_001849550.1| endonuclease VIII Nei [Mycobacterium marinum M] gi|183174585|gb|ACC39695.1| endonuclease VIII Nei [Mycobacterium marinum M] Length = 254 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 95/292 (32%), Gaps = 41/292 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + V R K+L Sbjct: 1 MPEGDTVWHTAARLRQYLAGKTLTRCDIR-------VPRFATVDLTGQVVEQVQSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M GS+ + +P + H + + + I Sbjct: 54 FIRTALVS-IHSHLKMDGSWRVGD----RPPRVDHHARIILEAND---------IRAVGV 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++L+E + ++ I + + + ALL+Q+++AGI Sbjct: 100 DLGVLELLERDNEGAVVAHLG-PDLLGEDWDPHIAAANLAADPHRCIAEALLDQRVLAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P + + L + ++ D Sbjct: 159 GNVYCNELCFVSGHLPTAPVSDVAKPLRLVTRAREMLWANRLRWNR-------TTTGDTR 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQK 289 VYG+ G+PC C I R G R ++C CQ+ Sbjct: 212 AG--------RQLWVYGRAGQPC-RRCATGIERQGPDGSSERVRYWCPACQR 254 >gi|302549792|ref|ZP_07302134.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|51317971|gb|AAU00096.1| putative ORF261 [Streptomyces viridochromogenes] gi|302467410|gb|EFL30503.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 261 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 117/289 (40%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ ++ + D Sbjct: 61 LLARTGGP-TLVLHFGMTGRLVCCHPGDAVEA----HDRVLFTLSGGR-----QLRFRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L R + + +LK AL +Q ++AG Sbjct: 111 RKLQGLWLAHDDFDIDRLLRRQGPDALTVDRAE---FEAVLCARRGSLKTALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA+L P R+TR L + + L +L ++ L A+ AG RD Sbjct: 168 LGNLLADEILWRARLRPDRRTRELTEAD------LRRLYGRMRGTLRAAVPAGCVPPRD- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + +P CG +RR AGR T +C CQ Sbjct: 221 -----------SWLTGHRDDPDPTCPRCGTGLRRSRMAGRGTVWCPRCQ 258 >gi|322434589|ref|YP_004216801.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] gi|321162316|gb|ADW68021.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] Length = 267 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 97/290 (33%), Gaps = 27/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E+ V + + RF G+ ++ V+ K+L Sbjct: 1 MPEGNELHRWANLHNEVFAGKK---VRVDSPQGRFTDAP----LLDGRTLVKVTAVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + ++ + L T T + P Sbjct: 54 GYDFGKIEGEQRILHVHMGLY---GDFSEGHPPMPEPRGALRLRIWTKTDWLELR--GPT 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + N + + + +++ L++Q I+AG+ Sbjct: 109 DCSLWNAEKWQTLLDRLG------PDPLNHDKPGPMLERIATRKTDIGQLLMDQSILAGV 162 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA+LSP + P+ L + ++ K++ DA+ Sbjct: 163 GNIYRAELLFRARLSPFKPGNE------VPQKTLEAIYKDAVKLMPDAMVDRRIVTTKAK 216 Query: 241 HIDGSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + A VY +TG PC CG I+ + A R+ F+C CQ Sbjct: 217 DRPHKTGEALNEEAHYVYRRTGRPCF-ICGTAIKTKIVASRNLFWCPTCQ 265 >gi|326779358|ref|ZP_08238623.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326659691|gb|EGE44537.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 274 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 100/291 (34%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIRRLADDHAERFAGAPVRVSSPQGKF---SDSAALLDGRTLTATDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N + R G Sbjct: 58 FGDTGWVHIHLGLFGRL-----GFGAAPPPPPTDTVRLRLVNAAHHADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITEPEKRAIHERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L + + ++ ++ + + H+ Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRATWDT------IWADLGDLMREGVRNNRIDTVRPEHLP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PC CG IR R+ F+C CQ Sbjct: 218 EAMGRPPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|330922902|ref|XP_003300019.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] gi|311326034|gb|EFQ91877.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] Length = 424 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 108/306 (35%), Gaps = 34/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + L + T+ + + + F A GKK++D ++ Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTINIVTAQDDPIIYGKVGTSASAFQKAITGKKVVDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTNNTNTKK 111 KY + L+ + HLGM+G ++ KP K + + Sbjct: 61 GKYFWLVLDSQPHPLFHLGMAGWVEYKNEETGYYRSTKPEKTEWPPKFWKFVLQMKEEPE 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D RR + LV+ + + P + +L + K + Sbjct: 121 NEMAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVDWLGKKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E +++AKL P + + + + L + I V Sbjct: 181 KALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQ------IKALHEAIMYVCDT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRSTFY 283 A+ +G F + + + G E G+ I + GR++ Sbjct: 235 AV-----------AANGDSDLFPEHWLMKHRWGKGKKEASKLPTGEKITFLKVGGRTSAI 283 Query: 284 CTYCQK 289 QK Sbjct: 284 VPSVQK 289 >gi|313836704|gb|EFS74418.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314929889|gb|EFS93720.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972317|gb|EFT16414.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907746|gb|EGG27510.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium sp. P08] Length = 272 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 109/295 (36%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + T + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIGSAFADTQVEVTSPQGRF---AESAAMLDGALLTSAQAWGKHLVVD 57 Query: 64 LEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G + P V + +T+ R Sbjct: 58 FDNHRPDHLLHIHLGLIGKLTVGP-------IVPVVGQVRLRITDGVTAADLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G S T+GP+P + + + + + + + LL+QK+ AG+ Sbjct: 104 --GPQMCELISDDEWGTVAATIGPDPIRDDADPDIAWDKVRRSSRRISDLLLDQKVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P+ + + ++ ++ ++AG Sbjct: 162 GNIYRAEVLFRHRIDPVTPGKQ------IFHSTWLAMWDDLVMLMRAGVEAGRIDTVQPE 215 Query: 241 HIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + G+PCL C +R I Q GR F+C CQ+ Sbjct: 216 HTPEAMGRLPRVDRHGGEVYVYRREGQPCL-VCNTPVRMIAQGGRHLFWCPQCQR 269 >gi|306834739|ref|ZP_07467805.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304569376|gb|EFM44875.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 112/294 (38%), Gaps = 35/294 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + + RF +A G +I K+L + Sbjct: 1 MPEGHVIHRLALTLNADYRGMPLSVTSPQGRFATE---AAILDGAEIDHAEAFGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +HLG+ G E + + I + N + R Sbjct: 58 FTAANPAHTLYIHLGLIGKLSFEPREDTR-------GQIRIRIDNGAQAAQLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + + L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 --GPQFCLLLTEEDYQARLTKVGQDPLRADADPEALWTKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA LSP + + + + + +++ +++ ++ G Sbjct: 162 GNIYRAEALFRAGLSPFTPGKDVSRE------TFFAIWKDLVELMNYGVEHGRIDTVRAE 215 Query: 241 HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G PC CG I V GR+ F+C CQ Sbjct: 216 HSPEAMGRDPRKDDHGGEVYVYRRAGLPCY-VCGTPIAEQVMEGRNLFWCPTCQ 268 >gi|289428750|ref|ZP_06430433.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] gi|289158148|gb|EFD06368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] Length = 272 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 107/289 (37%), Gaps = 23/289 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIGLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVD 57 Query: 64 LEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 58 FDNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++ E T+GP+P + + + + + + + LL+Q++ AG+ Sbjct: 107 TCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P + + + ++ + + Sbjct: 162 GNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAM 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 222 GRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|158315457|ref|YP_001507965.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] gi|158110862|gb|ABW13059.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] Length = 272 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF + G+ + + K+LL+E Sbjct: 1 MPEGHTVHRLAAVHQRMFRGRPVTVSSPQGRF---VDGARMLDGQVLAEAEAHGKHLLLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G++ + P V + LT +T Y D R Sbjct: 58 FGDEQILHIHLGIYGTYALGPGPAPVPTGA-----VRLRLTADTG-------YADLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ LGP+P + + + + + LL+QK+VAG GNI Sbjct: 106 ACELLAPGEVKV--LRDRLGPDPLRADADPALAWRRIERSRTPIAVLLLDQKVVAGPGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA + P+ R L ++ + ++ ++ D + G H Sbjct: 164 YRAEVLFRAGIHPLLPGRELARDQW------AAIWADLVTLMADGVRTGRIDTVRPAHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY +TG+PCL C +R + AGR+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRTGQPCL-ICAAEVRTVQLAGRNLFWCPACQ 267 >gi|124005766|ref|ZP_01690605.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] gi|123988834|gb|EAY28440.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] Length = 265 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 28/288 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + V + + + R KYL Sbjct: 1 MPELPEVERFKQYFEGTALHQKVVQVEIADAGVLACTAETLKEVAEKHTFDKTDRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE + +++H GMSGS P+ V L N + + ++ PR Sbjct: 61 FIETSADKVLMIHFGMSGSLKYYRDD------PPRFGRVVFHLANG-----FHLAFDCPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +D+ + YQ + + +K LLNQ++ AG+ Sbjct: 110 KFGRIDVADNVKAYQ----AKKKLSTDAYKMSWEEFEQNTAGRKGLIKPLLLNQQVAAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L++A++ P +T L +N L + +++ +L A+ + Sbjct: 166 GNWIADEILFQARVHPETRTNKLSKNE------LRLVYDKMRDILQTAVSHEANYNHYPK 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YF + + E C NCG + + GR+T+ C CQ Sbjct: 220 D------YFIHRRGWTDQNTENC-PNCGTKVHYMKVGGRATYLCEVCQ 260 >gi|307328464|ref|ZP_07607639.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885876|gb|EFN16887.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 106/292 (36%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R ++ + +F + G+ + K+L ++ Sbjct: 1 MPEGHTIHRLAADHLETFGGRPVRATSPQGKF---ADGAGLIDGQPLHHAEAHGKHLFLD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G++ + V + L N Y D R Sbjct: 58 FAATGWVHVHLGLFGTYAFGPAPAPPAT-----DTVRLRLANPEG-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + ++ L++QK+++G+GN+ Sbjct: 106 ACALITDGEKQAI--HDRLGPDPLRPADDGERAWTRISRSRVSVAALLMDQKVISGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R+L + + ++ ++ + + H Sbjct: 164 YRAEVLFRHGIDPYRPGRALTRAEWD------AIWADLVALMREGVRNNRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + G+PC CG IR A R+ F+C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRAGQPC-HVCGGEIRTADLAARNLFWCPDCQR 268 >gi|159901996|gb|ABX10726.1| DNA glycosylase/endonuclease [uncultured planctomycete 13FN] Length = 265 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 106/291 (36%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + NL V+ + ++ L A + V R K+L Sbjct: 1 MPEGDTIHRAAANLRKVLDRQKIVSASGRQEVLS-------VADLAEATVTGVEARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +L + H+GM+GS+ I K + + T + V+ P+ Sbjct: 54 LIHFDSDLVVHSHMGMTGSWHIYRL-TDSWQKPDTQAVLVLK------TAAWCVVCFTPK 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + ET L++ + + ++L+ + + L+NQ +V+GI Sbjct: 107 LLEIVS--ETKLRWNSWLTKLGPDILGPPISDDVFLSRMRSQSQHAIGEVLMNQNVVSGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L + P L L L ++ ++ G + R Sbjct: 165 GNVYKSEILHLEHIHPETLVAVLDDA------ALLSLRDRAVFLMKRNLNNGARTTRFRG 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQK 289 + VYG+ G+ CL CG +I RST++C CQK Sbjct: 219 EA--------SRLWVYGRRGQHCLK-CGTIILMQRHGDNARSTYFCPACQK 260 >gi|255080114|ref|XP_002503637.1| predicted protein [Micromonas sp. RCC299] gi|226518904|gb|ACO64895.1| predicted protein [Micromonas sp. RCC299] Length = 292 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 117/292 (40%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----RKNLRFDFP-HHFSAATRGKKIIDVS 54 MPELPEVE R + VT + + + + D F +A K + Sbjct: 1 MPELPEVESARCLVEAHCIGAKVTKVEFNEDGSFDEKIFKDVERKAFVSALLNKTLTAAH 60 Query: 55 RRAKYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTISLTN 105 RR K++ ++ G S + H GM+G+F I K P+ + ++ N Sbjct: 61 RRGKHMWWDMSGGADSPLFHFGMTGAFSIRGKGAMKYKAFVVDTSNWPPRFAKLVVTFDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + Y DPRRFG + LV PP+ LG +P + +F K+ Sbjct: 121 G-----IALAYTDPRRFGRIRLVR-GDVTASPPISELGFDPLLAMPDEAAFASRFAKRGG 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K+ LL+Q I AG+GN E L+ ++L P + +SL L L ++ V+ Sbjct: 175 PIKSVLLDQTIAAGVGNWIADEVLYHSRLHPEQPAKSLTPAQ------LRDLRDAMEDVI 228 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 A DAG + F + + + + G+ G+ I+ I Sbjct: 229 KTACDAGADAEM-----------FPDDWLFHHRWGKVAGEVGGEPIQFITVG 269 >gi|84497253|ref|ZP_00996075.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] gi|84382141|gb|EAP98023.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] Length = 284 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+L + + T + +F +A G ++++ + K+L Sbjct: 7 MPEGHTLHALARDLDIAFRG---TSPTVSSPQGKFGGG---AALLSGHEVLEATSWGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E G+ + VHLG+ G+F I+ TS A + P V + + R P Sbjct: 61 FVEFAGDRILWVHLGLIGTFTIDTTSYA--GEVPVVGQVRCRFATSDHVADLR----GPM 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + P+D + + + + + L++Q ++AG+ Sbjct: 115 VCDVVTPEKVDEILARLGPD--PLRPSDVRSDPDLAWKRIQRSSKPIAELLMDQAVLAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSLRD 238 GN+Y E L+R +++P R L + + L + I I ++ Sbjct: 173 GNVYRSEVLFRLRVNPFRPGNKLQRKTWRAIWEDLVTLLPIGVATSKIVTIHEQVDAVAQ 232 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + GE C CG I+ + AGR+ F+C CQ+ Sbjct: 233 ALEAGEDVRMTTRDSYVYKRQGEAC-HVCGSKIKTQIMAGRNLFWCGNCQR 282 >gi|253798457|ref|YP_003031458.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289553745|ref|ZP_06442955.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|297635070|ref|ZP_06952850.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732061|ref|ZP_06961179.1| DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659397|ref|ZP_07816277.1| DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319960|gb|ACT24563.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289438377|gb|EFD20870.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|328458225|gb|AEB03648.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 268 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + R G Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGTEFGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 108 PTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|227502181|ref|ZP_03932230.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077005|gb|EEI14968.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 111/294 (37%), Gaps = 35/294 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + + RF +A G +I K+L + Sbjct: 1 MPEGHVIHRLALTLNADYRGMPLSVTSPQGRFATE---AAILDGTEIDHAEAFGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +HLG+ G E + + I + N + R Sbjct: 58 FTAANPAHILYIHLGLIGKLSFEPREENR-------GQIRIRIDNGAQAAQLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + + L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 --GPQFCLLLTEEDYQARLTKVGQDPLRVDADPEALWTKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA LSP + + + + + +++ +++ ++ G Sbjct: 162 GNIYRAEALFRADLSPFTPGKDVSRE------TFFAIWKDLVELMNYGVEHGRIDTVRAE 215 Query: 241 HIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G PC CG I V GR+ F+C CQ Sbjct: 216 HSPEAMGREPRKDDHGGEVYVYRRAGLPCY-VCGTPIAEQVMEGRNLFWCPTCQ 268 >gi|15609601|ref|NP_216980.1| DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15841988|ref|NP_337025.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31793645|ref|NP_856138.1| DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638347|ref|YP_978571.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662299|ref|YP_001283822.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148823664|ref|YP_001288418.1| DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969788|ref|ZP_02552065.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404400|ref|ZP_03416581.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412221|ref|ZP_03420983.1| DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215427847|ref|ZP_03425766.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431410|ref|ZP_03429329.1| DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215446710|ref|ZP_03433462.1| DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754195|ref|ZP_03532991.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558461|ref|ZP_03537537.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|224990841|ref|YP_002645528.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232598|ref|ZP_04925925.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|254365240|ref|ZP_04981286.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254551512|ref|ZP_05141959.1| putative DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187470|ref|ZP_05764944.1| putative DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260201589|ref|ZP_05769080.1| putative DNA glycosylase [Mycobacterium tuberculosis T46] gi|260205768|ref|ZP_05773259.1| putative DNA glycosylase [Mycobacterium tuberculosis K85] gi|289443990|ref|ZP_06433734.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448107|ref|ZP_06437851.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289570619|ref|ZP_06450846.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289575158|ref|ZP_06455385.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289746246|ref|ZP_06505624.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289751070|ref|ZP_06510448.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289754572|ref|ZP_06513950.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289758596|ref|ZP_06517974.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289762633|ref|ZP_06522011.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|294994428|ref|ZP_06800119.1| putative DNA glycosylase [Mycobacterium tuberculosis 210] gi|298525942|ref|ZP_07013351.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|306776734|ref|ZP_07415071.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|306972844|ref|ZP_07485505.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|307080550|ref|ZP_07489720.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|307085148|ref|ZP_07494261.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|54040502|sp|P64159|Y2491_MYCBO RecName: Full=Putative DNA glycosylase Mb2491c; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb2491c; Short=Putative AP lyase Mb2491c gi|54042831|sp|P64158|Y2464_MYCTU RecName: Full=Putative DNA glycosylase Rv2464c/MT2539; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv2464c/MT2539; Short=Putative AP lyase Rv2464c/MT2539 gi|2791504|emb|CAA16041.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium tuberculosis H37Rv] gi|13882263|gb|AAK46839.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619238|emb|CAD97352.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium bovis AF2122/97] gi|121493995|emb|CAL72472.1| Possible dna glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601657|gb|EAY60667.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|134150754|gb|EBA42799.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|148506451|gb|ABQ74260.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148722191|gb|ABR06816.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis F11] gi|224773954|dbj|BAH26760.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416909|gb|EFD14149.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421065|gb|EFD18266.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289539589|gb|EFD44167.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289544373|gb|EFD48021.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289686774|gb|EFD54262.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289691657|gb|EFD59086.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289695159|gb|EFD62588.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710139|gb|EFD74155.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|289714160|gb|EFD78172.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298495736|gb|EFI31030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|308214894|gb|EFO74293.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308357772|gb|EFP46623.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308361717|gb|EFP50568.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|308365327|gb|EFP54178.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|323718970|gb|EGB28120.1| DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904078|gb|EGE51011.1| DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 268 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + R G Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGAEFGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 108 PTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|328882456|emb|CCA55695.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 269 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 95/285 (33%), Gaps = 18/285 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAVDHRERFGGRSVRVTSPQGKFADS---AALLDGTVLETTEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + +HLG+ G P + V + L N+ + R G Sbjct: 58 FTGMGWVHIHLGLFGKVGFGDAPA-----PPPTDTVRLRLANSRSYVDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITDAEKRAIHDRLGPDPLREDDDRARAWRRISASRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L L+ L + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTPEEWDALWEDLVLLMREGVRLNRIDTVRPEHTPEAMGRP 223 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + +PC CG IR A R+ F+C CQ Sbjct: 224 PRVDDHGGEVYVYRRANQPC-HVCGSEIRTADLAARNLFWCPGCQ 267 >gi|298708421|emb|CBJ48484.1| conserved unknown protein [Ectocarpus siliculosus] Length = 532 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 104/315 (33%), Gaps = 49/315 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----HRKNLRFDF--------PHHFSAATRG 47 MPELPEVE R + T+T++ ++ +FD G Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEG 60 Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------NPQHNHVT 100 +KI+++ RR K + L+ + H GM+G+F ++ K +K P+ + Sbjct: 61 RKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLE 120 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 I ++N + DPRR + + P + Sbjct: 121 IQMSNGAC-----LALTDPRRLSR-VKLRAEPEASPPISLLGPDPLTHPLSLETFAAALA 174 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 L ++V+G+GN E ++A + P +L + L Sbjct: 175 KPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQ------IAALHSR 228 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE----PCLSN--CGQMIRRI 274 + V +A + + DY F + + + G+ G I Sbjct: 229 LLSVCREACE----ARADYTS-------FPKEWLFHHRWGKGKNSEGAPRVSSGHPIVFD 277 Query: 275 VQAGRSTFYCTYCQK 289 V GR+T QK Sbjct: 278 VVGGRTTAIVPAVQK 292 >gi|306780507|ref|ZP_07418844.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|306785259|ref|ZP_07423581.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|306789618|ref|ZP_07427940.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|306793945|ref|ZP_07432247.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|306798339|ref|ZP_07436641.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|306804215|ref|ZP_07440883.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|306808785|ref|ZP_07445453.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|306968617|ref|ZP_07481278.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308326655|gb|EFP15506.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308330081|gb|EFP18932.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308333921|gb|EFP22772.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308337724|gb|EFP26575.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308341405|gb|EFP30256.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308344891|gb|EFP33742.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308349202|gb|EFP38053.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308353823|gb|EFP42674.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] Length = 268 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLAQLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + R G Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGAEFGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 108 PTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|313819617|gb|EFS57331.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] gi|313822058|gb|EFS59772.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823706|gb|EFS61420.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313826029|gb|EFS63743.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] gi|314924755|gb|EFS88586.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314961957|gb|EFT06058.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314978934|gb|EFT23028.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314986623|gb|EFT30715.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990979|gb|EFT35070.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315083619|gb|EFT55595.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087041|gb|EFT59017.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089216|gb|EFT61192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|327329636|gb|EGE71392.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|328752463|gb|EGF66079.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|332676015|gb|AEE72831.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 299 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 23/288 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + ++ + + Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMG 249 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 250 RPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|120405005|ref|YP_954834.1| formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] gi|119957823|gb|ABM14828.1| Formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] Length = 268 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +AA G S K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRF---VDGAAAVNGHVFKKASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ G+F + P V + + R Sbjct: 58 YQGGRVVHVHLGLYGTFTEWPLPDDRTQPIPV-GQVRMRMLGAEYGTDLR-------GPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++E + LGP+P + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIEEPDVADV--VARLGPDPLRSDADPELAWRRISKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R ++ + ++ ++ ++ + G + H Sbjct: 168 YRSELLFRHRTDPFRPGTTVTSDEF------AEMWTDLVALMKVGVRRGKIVVVAPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C IR + GR+ F+C CQ Sbjct: 222 GAPSYREGRPRTYVYRRAGDPC-RVCATPIRTVELEGRNLFWCPACQ 267 >gi|301300337|ref|ZP_07206542.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852073|gb|EFK79752.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 148 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 9/157 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ N + DI + + F K I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIINEETEFIEKLTNKTIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + +E + +H HV T+ T+ + YND R Sbjct: 61 LFRFSSDLTMISHLRMEGKYFVE----PSTKEVEKHTHVVFDFTDGTS-----LRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +FG M LV+T ++ Q L LGPEP + +F Sbjct: 112 KFGRMQLVKTGVEMQTAGLAKLGPEPKEETFIVEDFF 148 >gi|168061202|ref|XP_001782579.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665899|gb|EDQ52568.1| predicted protein [Physcomitrella patens subsp. patens] Length = 496 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 108/295 (36%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + + + + + D P A GKKI++ R+ K Sbjct: 1 MPELPEVQAAKVLVGSRCLGGVIVKALVANDSKVIDGVTPAALQKALLGKKILETHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT----ISLTNNTNTKKYRV 114 +L ++L+ GMSG+ +++ + + + + V Sbjct: 61 HLWLQLDSPPYPSFQFGMSGAVVVKGVKGLQYKSSKVDDTEEFPSKYWKVHLKLDTGVEV 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ + PP+ LG + +A T K +K LL+Q Sbjct: 121 AFTDKRRFARVRLL--DDPAKEPPISELGLDAYLELPSAKDFTEALKTKKGAIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AGIGN E L+++K+ P + SL T +++ Sbjct: 179 SFLAGIGNWVGDEVLYQSKIHPEQSANSLKDEECTRLHTAIRVV---------------- 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L V + F ++ + + G I + GR++ Y QK Sbjct: 223 -LDKAVSVHADSEKFPRSWIFHHRWDRKPGKIRGNQIETVTVGGRTSAYVPNIQK 276 >gi|300780206|ref|ZP_07090062.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300534316|gb|EFK55375.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 267 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 97/288 (33%), Gaps = 24/288 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++ R + N + + RF ++ G ++ + K+L ++ Sbjct: 1 MPEGHVLHRLARELNANFRSAPVEVTSPQGRFTQ----ASLIDGSRLTRATAHGKHLFVD 56 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +HLG+ GS E + + ++N T R Sbjct: 57 FDAPHVEHVVYIHLGLIGSLRFEPAEDN-------WGQIRLHISNGTIAANLR------- 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ + G +P + L + H+ ++ + L++QK+ AG+ Sbjct: 103 GPQFCKLLTDDEVDAI--IARSGFDPIVEATPPDALYAKIHRSKRSIGSLLMDQKLFAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P L + + + + Sbjct: 161 GNIYRAEVLFRQGIDPTVPGTLLSRAQFDAIWTDLVELMAYGVDNGRIDTVRPDHTPETM 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D VY + G+PC CG I V GR ++C CQ Sbjct: 221 GRDPRKDDHGGEVYVYRRAGDPCY-ICGTPIEMKVSEGRKLYWCPGCQ 267 >gi|317126518|ref|YP_004100630.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] gi|315590606|gb|ADU49903.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] Length = 302 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 108/293 (36%), Gaps = 37/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + +LR+ P +A RG++ ++V R K+L Sbjct: 1 MPEGDTVWRTAHRLDQALAGR-----EVVESDLRW--PTLATADLRGRRTLEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M G + IE T KP + + T + R+ D Sbjct: 54 LHRLEGGLTLHSHLRMEGQWRIEPTPRLKPGWRRSPHLRALLATADWTALGLRLGMLDLV 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LGP+ + ++ + ALL+Q+ +AG+ Sbjct: 114 ----------ETSREADLVGHLGPDLLGDDWHPDRAVDHLAACAVPIGEALLDQRNLAGL 163 Query: 181 GNIYVCEALWRAKLSPIRKTRS-LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 G ++ E L+ +L P + D ++LI + RD Sbjct: 164 GTLWTAETLFALRLHPWADASTLGRPALEEVVDRAHRLIDAGR--------------RDA 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 V V+G++G PC CG +R + R+ FYC CQ Sbjct: 210 VQSATGSLAKGETTYVHGRSGRPC-RRCGTTVRVALIGPATRERTMFYCPSCQ 261 >gi|329934547|ref|ZP_08284588.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] gi|329305369|gb|EGG49225.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] Length = 270 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 101/291 (34%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + T + + +F +A ++ K+L + Sbjct: 1 MPEGHTIHRLAQDYARFTARTALRVTSPQGKF---ADAAALLDRTELTATEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L ++T R G Sbjct: 58 FAATGWVHIHLGLFGKVAFGDAPA-----PPPTDTVRLRLADDTAYVDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK+VAG+GN+ Sbjct: 104 PTTCALITEPEKRAIHARLGPDPLRADADPAVAYRRISRSRTTIAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L L ++ ++ + + H Sbjct: 164 YRAEVLFRHGIDPYRPGRDLTPAAWD------ALWADLVDLMREGVRHNRIDTVRPAHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + G+ C CG +R AGR+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRAGQAC-HLCGTPVRTAALAGRNLFWCPTCQ 267 >gi|297194363|ref|ZP_06911761.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] gi|197720982|gb|EDY64890.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] Length = 271 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 105/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + ++ + +F +A G+ + K+L + Sbjct: 1 MPEGHTIHRLAEDYLHRFAGWNVRVSSPQGKF---SDSAALLDGRVLDGADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + +HLG+ G P + V + ++N + R G Sbjct: 58 FEDIGWVHIHLGLFGKLGFGPAPA-----PPATDTVRLRVSNEEHYADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P S + + + + + L++QKI+AG+GN+ Sbjct: 104 PTTCALITGPEKRAIHDRLGPDPLRPSDDPDRAWARISRSRTTIAALLMDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R + L + + +++ ++ + + H Sbjct: 164 YRAEVLFRHGIDPYRAGKDLTRRQWD------AIWEDLAALMREGVRNNRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY +T PCL C IR + R+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRTNMPCL-VCDTRIRTAALSARNLFWCPACQ 267 >gi|330466398|ref|YP_004404141.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] gi|328809369|gb|AEB43541.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] Length = 264 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 102/293 (34%), Gaps = 38/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + G ++ D + R K+L Sbjct: 1 MPEGDTVWNTARVLARALTGARLTGSDFR-------VPQLATTDLTGWRVTDCASRGKHL 53 Query: 61 LIELEG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LI L+ + ++ HL M G++ + + P H + T + Y + Sbjct: 54 LIRLDEPTGAAHWTLHSHLRMDGTWRVYAPG-ERWSARPAHLIRVVLSTATSTAVGYHLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 LV T+ +++ + + + ++ ALL+Q+ Sbjct: 113 EVA--------LVPTAEEHRLVGHLG-PDLLGTDWDPQEAVRRLADRPAESIAEALLDQR 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN+Y CE L+ ++P + + G L + S+ Sbjct: 164 NLAGVGNLYKCELLFLRGINPRTRVADVPDLAGLITLAHDLLAANRGRWTQ-------ST 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S VYG+ +PC CG IR+ R T++C CQ Sbjct: 217 TGSLRRGQTS--------YVYGRRAQPC-RRCGTAIRKEELGERVTYWCPRCQ 260 >gi|323359769|ref|YP_004226165.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276140|dbj|BAJ76285.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 330 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 118/342 (34%), Gaps = 67/342 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + T + RF ++ G++ IDV K + Sbjct: 1 MPEGHSVHRIARQFARNIVGRT---VSASSPQGRF---VEGASVIDGRETIDVRAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFII-----EHTSCAKPIKNPQHNHVTISLTNNT-------- 107 + EG++ + VHLGM G++ + A H + ++ ++ Sbjct: 55 FLAFEGDMWLRVHLGMYGAWDFSGEVAVDATIASANGRMGHTNQRGTVLDDAPILDAAGE 114 Query: 108 ----------------------------------NTKKYRV----IYNDPRRFGFMDLVE 129 + R+ D R L Sbjct: 115 NSLSSIGAPRRARVRMSEQTTGLEEQTEWPPPIVGAVRLRLLTESTCADLRGPTACALQS 174 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 P D S T KK + + L++Q +V+GIGN+Y E L Sbjct: 175 PDEVAATIAKLGPDPLVDDVSEGEERFTATVRKKPTAIGLLLMDQSVVSGIGNVYRAEIL 234 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID---GSI 246 +RA+ +P R P++++ ++ ++ ++L ++ G D + + ++ Sbjct: 235 FRARQNPHTPGRD------VPEEVVREMWRDWVRLLSIGVETGQMMTMDDLDPEAYRRAM 288 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG + AGR ++C CQ Sbjct: 289 AHRDDRHWVYHRAGLPC-RVCGTTVLMEEAAGRKLYWCPTCQ 329 >gi|284030930|ref|YP_003380861.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] gi|283810223|gb|ADB32062.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] Length = 261 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + P + G+ +++V R K+L Sbjct: 1 MPEGDTVWRATKRLHQALAGKVLVKSDFR-------VPALATTDLSGETVVEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++I HL M GS+ + + P + + T+ YR+ Sbjct: 54 LMRISNGVTIHSHLRMEGSWHLYRPG-ERWKGGPDYQVRAVLGTDAWTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++LV T + + + + + + ALL+Q+ +AGI Sbjct: 107 --PVLELVATDAENTVVGHLG-PDILSPTFDRTQAIANLAADPDRTISEALLDQRNLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + L P + + +L++ L++ Sbjct: 164 GNFYRVEVCFLLGLHPWKPVSQVDLGAAVDLS--RRLMKAN--------------LQNAA 207 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + V+ + G+PC C I R TF+C +CQ Sbjct: 208 QVTTGVNRPGQRSWVFERAGKPC-RRCRTTILTAHLGQPPQDRVTFWCPHCQ 258 >gi|320588680|gb|EFX01148.1| formamidopyrimidine-DNA glycosylase [Grosmannia clavigera kw1407] Length = 365 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 111/315 (35%), Gaps = 44/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E I L + + + F F+A+ GKK++ + Sbjct: 1 MPEIAEAARIVHFLRKHLVGKQIKKAAAIDDSNVFGKAGTTGATFAASVLGKKVLSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH------------TSCAKPIKNPQHNHVTISLT 104 KY I L+ ++H GM+G I+ + P+ + Sbjct: 61 GKYFWIVLDSQPHPVMHFGMTGWIHIKGMRTAYTNYYNKMKPGDADLWPPRFWKFHLQAE 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQF 160 + K + + DPRRFG + L++ P + F ++ Sbjct: 121 ADGAADKVELAFTDPRRFGRVRLIDCPGDRIRQFSPLVENGPDPVVDADIFTESFVRDTM 180 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +++ +K LL+Q ++GIGN E L++A+L P + + +L Sbjct: 181 QRRHVPIKALLLDQAFISGIGNWVGDEVLFQARLHPEQYCDEFDGAQ------VKQLYTS 234 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE------PCLSNCGQMIRRI 274 I V A+ + G F + + + + G+ P L G+ + + Sbjct: 235 ICHVCRTAV-----------DLLGDSDRFPDDWLFHYRWGKGSKGAVPQLPG-GEKLSFL 282 Query: 275 VQAGRSTFYCTYCQK 289 GR++ + QK Sbjct: 283 TVGGRTSCFAPSLQK 297 >gi|271963707|ref|YP_003337903.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270506882|gb|ACZ85160.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 263 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 104/292 (35%), Gaps = 39/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P H +A G+ +++ R K+L Sbjct: 1 MPEGDVVYRTARRLGEALDGRILTRSDFR-------VPRHATADLTGRAVLETVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++G L++ HL M GS+ I + P + V + L N Sbjct: 54 LTRVDGGLTVHTHLRMEGSWRISPAG----RRPPSGDVVRLVLANADWQ-------AVGV 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G +DLV T +++ + A + + ALL+Q+ +AGI Sbjct: 103 RLGMVDLVATGEEHRLVGHLG-PDPLGPDWDPAEAVRRLMGSPGLTIGEALLDQRNLAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G +Y E L+ A +SP R + L G R Sbjct: 162 GTVYRAETLFLAGVSPWRPVGEVEDVRRIVALAQRLLHAN------------GERERRVT 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 D G VYG+ G PCL CG+ I R R F+C +CQ Sbjct: 210 TGDARPG---RDTWVYGRAGRPCL-RCGRRISRGEMGAQPQERLIFWCRHCQ 257 >gi|289426532|ref|ZP_06428275.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|295131139|ref|YP_003581802.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] gi|289153260|gb|EFD01978.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|291375877|gb|ADD99731.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] Length = 272 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 107/292 (36%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + + + + + RF +A G + K+L Sbjct: 1 MPEGHVIHRLANAIDLAFAG---SRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHL 54 Query: 61 LIELEGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +++ + + +HLG+ G +E T P V + +T+ R Sbjct: 55 VVDFDNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 P+ ++ E T+GP+P + + + + + + + LL+Q++ Sbjct: 104 GPQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVA 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+R ++ P + + + ++ Sbjct: 159 AGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTP 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 219 EAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|324997986|ref|ZP_08119098.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia sp. P1] Length = 286 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 111/294 (37%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R L T+TD+ R P ++A +G ++ R K Sbjct: 19 MPELPEVENARAVLAQA-TGRTITDVDDRDDWVCRPHRPGDIASALKGGRLTAAHRIGKT 77 Query: 60 LLIELEGNLSII-----VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + E + VHLGM G ++ ++ + P ++ V Sbjct: 78 MWCDTETSDGDAGPALGVHLGMGGRIVVTNSGGERIGGGPARPDRQARKREWD---RFTV 134 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++D +F D P L P + + S +K LL+Q Sbjct: 135 TFDDGGQFRLFDKRRLGRVRLDPDLSG--LGPDAEGLRPAVFRERLLRGRSAVKARLLDQ 192 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AG+GN+ E LW+A+++P R L + + L +L + + + L AI GG Sbjct: 193 SVLAGVGNLLADETLWQARIAPATPVRDLTRTD------LDRLHRNLDRALERAIANGGV 246 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + G C CG + GRST++C Q Sbjct: 247 HTGEVIE--------------HRHPGGHC-PRCGAEMVHGTVGGRSTWWCPQEQ 285 >gi|182438709|ref|YP_001826428.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467225|dbj|BAG21745.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 274 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 100/291 (34%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIRRLADDHAERFAGAPVRVTSPQGKF---SDSAALLDGRTLTATDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N + R G Sbjct: 58 FGDTGWVHIHLGLFGKL-----GFGAAPPPPPTDTVRLRLVNAAHHADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITEPEKRAIHERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L + + ++ ++ + + H+ Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRATWDT------IWADLGDLMREGVRNNRIDTVRPEHLP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PC CG IR R+ F+C CQ Sbjct: 218 EAMGRPPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|219666826|ref|YP_002457261.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|219537086|gb|ACL18825.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 281 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 103/292 (35%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + R L +KN + + K +F P + A G +I Sbjct: 1 MLELPEVLTLVRQLNESVKNRRILKVWPPTKAHKFCWYSGEPEEYDKALAGSRIAGAEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + + + V+ G++ + K P++ + + L + +++ Sbjct: 61 GTFAELIFDNDRKLCVNDGVNLRLM-------PAGKVPENYQLMMELDDGQ-----ALVF 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G + Y R A + K + K L ++ Sbjct: 109 TVAMYGGIFAHDGSYDNLYYLASRNSISPFAQDFPAYYLRLFSESKPTLSAKAFLATEQR 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 GIGN + + L+ A + P RK +L Q KL+Q + +VL + GG Sbjct: 169 FPGIGNGTLQDILFEAGIHPKRKIGTLEQWERD------KLLQAVIEVLNEMAKLGGRDT 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S G C CG I + G S ++C CQ Sbjct: 223 E--KDLFGVSGGYKTKMSK-NTAGTDCG-QCGGTILKENYLGGSVYFCPECQ 270 >gi|169628665|ref|YP_001702314.1| formamidopyrimidine-DNA glycolase [Mycobacterium abscessus ATCC 19977] gi|169240632|emb|CAM61660.1| Probable formamidopyrimidine-DNA glycolase [Mycobacterium abscessus] Length = 265 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 98/287 (34%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + K+L + Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFT---EGAAAVNGRTFVQAHAWGKHLFHD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G+F + Q T+ + Sbjct: 58 YGPVGVVHVHLGLYGAF--TELPVPMGLPVGQVRMRIEGAEFGTDLRGATACELI----- 110 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P + + K + + L++QKI+AG+GN+ Sbjct: 111 -------DAPQVDAILARLGPDPLRPRSDPASAFERIAKSHRPIGALLMDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R+ L L L ++ + + G D H Sbjct: 164 YRSEVLFRRRIDPYREGSRLDPEQ------LTALWSDLVDRMRVGLRVGKIVTVDPEHDC 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + G PC CG I R+ F+C CQ Sbjct: 218 GDPSYAPDRPRTYVYRRAGAPC-RVCGTPILTAEMDARNLFWCPSCQ 263 >gi|300788645|ref|YP_003768936.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299798159|gb|ADJ48534.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 268 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 102/285 (35%), Gaps = 18/285 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++ G+ K+L + Sbjct: 1 MPEGHTLHRLARLHKRRFAGAPVAVSSPQGRFAAE---ASRLDGQVFAGAEAYGKHLFHD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + +HLG+ G+F + V + L R + D R Sbjct: 58 YGSHGIVHIHLGLYGTF-----GESPLPAPEPVGQVRLRL-------AGRTHWTDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ LGP+P + + +++ L++Q ++AG+GN+ Sbjct: 106 RCELLDPGQADAIK--ARLGPDPLRRDAKPELAWARVSRSKTSIAALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++P+ R+L + ++ + L + + Sbjct: 164 YRAEVLFRHGVAPLTPGRALDRPLWDDLWADLVILMRDGVRVGRIDTVRPEHLPEAMGRA 223 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G+PCL CG + GR+ ++C CQ Sbjct: 224 ARVDRHGGEVYVYRRAGDPCL-VCGTPVAHSELVGRNLYWCPKCQ 267 >gi|291303611|ref|YP_003514889.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] gi|290572831|gb|ADD45796.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] Length = 269 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 103/286 (36%), Gaps = 20/286 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R T + + RF + G + K L +E Sbjct: 1 MPEGHVIHRLADRYATAFTGGPLAVSSPQGRFADS---AKRLDGLSMTGTEAHGKQLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG I +HLG+ G V + L Y+D R Sbjct: 58 FEGQQWIRIHLGIYGKVAFGEPPAPAVEGA-----VRLRLEGERA-------YSDLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + +GP+P + + ++ L++Q IV+G+GNI Sbjct: 106 VCELI--GPDEKQAVHDRIGPDPLRADADPDAAWRLISRSKRDIGTLLMDQAIVSGVGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 Y E L+R + P+R ++ + L +L++E K+ L + + Sbjct: 164 YRAEVLFRHGIDPMRPGTAMTEAEWDAVWADLVELMREGVKLGRI-DTVRAEHLPEAMGR 222 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G+PCL CG + GR+ F+C CQ Sbjct: 223 EPRVDRHGGEVYVYRRDGKPCL-VCGTAVAIAKHQGRNLFWCPSCQ 267 >gi|225873334|ref|YP_002754793.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225793175|gb|ACO33265.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 298 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 92/291 (31%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L H + G+ I V R K+L Sbjct: 1 MPEGDTIFRSARTLHKALAGTIVTGFVTEFAQL---AAVHDNTPVTGRTIEQVESRGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV-IYNDP 119 LI G+L ++ H+ MSGS+ I + + T V + Sbjct: 58 LIHFSGDLILVTHMLMSGSWHIYRRGERWRRGRSHMRVLLANETYEAIAFDVPVARFYTS 117 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + + + N LLNQ+++AG Sbjct: 118 RTLARNSAIPRLGPD----------PLRADFSAGDAAARIAAHPQEEIANVLLNQQVIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E + LSP + L + + + I + + Sbjct: 168 LGNVFKSEVCFVCGLSPFARVHELSPDQVAALLAAAERLMNINVSDAASGGVITYTGARR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 G VYG+ G+ C CG I Q RST++C CQ Sbjct: 228 TRNVSDAGA---RLWVYGRRGQAC-RRCGATILMRKQGSAARSTYWCPQCQ 274 >gi|297562590|ref|YP_003681564.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847038|gb|ADH69058.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 293 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 110/303 (36%), Gaps = 30/303 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R K + RF +A G+ + + K+L + Sbjct: 1 MPEGHTLHRLAAHFDKTFGGGAVRASSPQGRF---ADGAARIDGRVLTESEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS-----------LTNNTNTKKY 112 + + VHLG+ G++ + + P+ + Sbjct: 58 FDSGEWLRVHLGLYGAWSFGDADGERHLGAPRAAGGARRELLRDAEGFVVAPEPVGAVRA 117 Query: 113 RVI----YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R++ + D R ++V + LGP+P + + + +++ Sbjct: 118 RLVNSSGWADLRGPSACEVVT--EDDKRAVQDRLGPDPLRDDADPERAWRVVSRSRTSIA 175 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L+ Q +VAGIGNIY E+L+RA L P+ R L + + +L ++ +L D Sbjct: 176 ALLMRQDVVAGIGNIYRAESLFRAGLDPMTPGRDLTADQWS------RLWDDLSGLLRDG 229 Query: 229 I---DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + + D ++ V +TGEPC C + AGR+ ++C Sbjct: 230 VRDGYIITTLPEHRPDPDARPVPRPDSLYVCYRTGEPC-RVCSSPVASAELAGRTLYWCP 288 Query: 286 YCQ 288 CQ Sbjct: 289 RCQ 291 >gi|41408382|ref|NP_961218.1| hypothetical protein MAP2284c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396738|gb|AAS04601.1| hypothetical protein MAP_2284c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 268 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVSSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + + R Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGAGHGTDLR-------GPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDEGQVSDV--LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAEFDAAWT------DLVALMKVGLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|116621959|ref|YP_824115.1| endonuclease VIII/DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] gi|116225121|gb|ABJ83830.1| endonuclease VIII / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] Length = 250 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 109/290 (37%), Gaps = 43/290 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L + G+ + V K+L Sbjct: 1 MPEGDTIFRTARTLQAAIGGREVTRFESVLPKLER---VDYDTPLAGRTVEKVEANGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ I + + P++ + T+ +RV Sbjct: 58 LIYFSGDLILLTHMLMSGSWHIYRPG--ERWQRPRNEMRIVIETDAMVAVAFRV------ 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 SL + + A+N + + + + L ALL+Q+++AG+ Sbjct: 110 -PVAEFHTAHSLARREGLNQLGPSALAENFDAETAVANLASRPDLELGLALLDQRLIAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++ E + LSP R SL + L +L+ ++ R + Sbjct: 169 GNLFKSEVAFACGLSPFRTVASLSRIQ------LEELV---------------TTSRRLL 207 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ--AGRSTFYCTYCQ 288 +VYG+ GEPC CG IR GR +F+C CQ Sbjct: 208 QARPVP-------NVYGRAGEPC-RRCGTSIRSAKHRDDGRVSFWCPVCQ 249 >gi|152967464|ref|YP_001363248.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151361981|gb|ABS04984.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 265 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 103/289 (35%), Gaps = 28/289 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R+L+ + + RF +A + ++ K+L Sbjct: 1 MPEGHSVHRSARDLLARFGGGV---VLVGSPQGRF---AEGAALLDERALVATEAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG ++ VHLG+ G + + V + L R Sbjct: 55 LARFEGGRTLHVHLGLYGRWTF-----GEGAPEAPRGQVRLRLEGERAWADLR------- 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++++ + LG +P + + + + L+ Q++VAG+ Sbjct: 103 GPTACEVLDPAGVAA--LHARLGEDPLRPDADPGAAHARISRSRVGVGALLMQQEVVAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDY 239 G + E L+R + P R R L + L +L+ + ++ ++ Sbjct: 161 GTTFRAEVLFRNGVDPFRPGRELARAEWDAVWADLVRLMAAGVRAGRI-----VTTRPEH 215 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS ++F VYG+ G+PC C + + AGR +C CQ Sbjct: 216 RSRRGSPSR-ADSFYVYGRAGQPC-RVCSTPVEATLVAGRHLMWCPTCQ 262 >gi|302545408|ref|ZP_07297750.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302463026|gb|EFL26119.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 270 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 106/292 (36%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R ++ + +F +A G+ + K+L ++ Sbjct: 2 MPEGHTIHRLAADHLERFGGRPVRATSPQGKF---ADGAALVDGQVLQHAEAHGKHLFLD 58 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G + P + V + L Y D R Sbjct: 59 FAATGWVHVHLGLFGKYTFGPAPAPPPTE-----TVRLRLAGPGG-------YADLRGPT 106 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ + LGP+P + + + ++ L++QKIVAG+GN+ Sbjct: 107 ACALIT--DPEKQAIHDRLGPDPLRPDDDGDGAWTRISRSRVSVAALLMDQKIVAGVGNV 164 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R+L + + ++ +++ + + H Sbjct: 165 YRAEVLFRHGIDPYRPGRALARAEWD------AIWSDLAELMREGVRNNRIDTVRPEHTP 218 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + G+PCL C IR A R+ F+C CQ+ Sbjct: 219 EAMGRPPRVDDHGGEVYVYRRAGQPCL-VCDGEIRTAGLAARNLFWCPACQQ 269 >gi|296270386|ref|YP_003653018.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296093173|gb|ADG89125.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 269 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 105/292 (35%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE II R ++ + + +F +A G+++ K+L + Sbjct: 1 MPEGHIIHRLAAEYARSFAGGPVAVSSPQGKF---SDSAALLDGQRMHGTDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P+ V + L + D R Sbjct: 58 FGPLGWVRIHLGLYGKVTFGDDPAPAPVGA-----VRLRLAGGG-------RWADLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + + LGP+P + + + + + + LL+Q+++AG+GN+ Sbjct: 106 ACELIT--DEEKRAVHARLGPDPLRDGDDPERAWARISRSRAPIAALLLDQRVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R L + L ++ ++ + G H Sbjct: 164 YRAEVLFRHGIDPYRPGCELTRAEW------EALWSDLAGLMRQGVANGRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + G PC CG IR R+ ++C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRAGSPC-HVCGAEIRTAELESRNLYWCPACQR 268 >gi|50843091|ref|YP_056318.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840693|gb|AAT83360.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|313763490|gb|EFS34854.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313773644|gb|EFS39610.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313793880|gb|EFS41904.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801271|gb|EFS42522.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313811479|gb|EFS49193.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313816671|gb|EFS54385.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829499|gb|EFS67213.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313831220|gb|EFS68934.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834242|gb|EFS71956.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|313840005|gb|EFS77719.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914787|gb|EFS78618.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314919394|gb|EFS83225.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] gi|314920697|gb|EFS84528.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930576|gb|EFS94407.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954467|gb|EFS98873.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957541|gb|EFT01644.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314974096|gb|EFT18192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976613|gb|EFT20708.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314984276|gb|EFT28368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|315079612|gb|EFT51605.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315081156|gb|EFT53132.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315095440|gb|EFT67416.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|315099117|gb|EFT71093.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100398|gb|EFT72374.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315106907|gb|EFT78883.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] gi|315109097|gb|EFT81073.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327328501|gb|EGE70263.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327444288|gb|EGE90942.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444832|gb|EGE91486.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327452092|gb|EGE98746.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327454870|gb|EGF01525.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457846|gb|EGF04501.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755298|gb|EGF68914.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758221|gb|EGF71837.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] gi|328759936|gb|EGF73520.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] Length = 299 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 23/288 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + ++ + + Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMG 249 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 250 RPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|118465909|ref|YP_880937.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium 104] gi|254774526|ref|ZP_05216042.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium subsp. avium ATCC 25291] gi|118167196|gb|ABK68093.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium avium 104] Length = 268 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVTSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + ++ R Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGASHGTDLR-------GPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDEGQVSDV--LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAEFDAAWT------DLVALMKVGLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|226307305|ref|YP_002767265.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226186422|dbj|BAH34526.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 265 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 101/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF + G + K+L Sbjct: 1 MPEGHTLHRLARLHARKFVGSPVRVLSPQGRF---AEDARLVDGHVLTSSDAWGKHLWHT 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + L++ VHLG+ G F ++ Q + T+ + Sbjct: 58 YDNGLTVHVHLGLYGKF--TDSALPMEEPVGQVRMRMVGADFGTDLRGPTACEVLLP--- 112 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + K + L++Q ++AG+GN+ Sbjct: 113 ---------PQVAAIEARLGPDPLRRGADPHQAWVRISKSKKAIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R + + T + ++ +++ + G + H + Sbjct: 164 YRAELLFRHGISPERPGNLISHDEWT------AMWADLVELMKVGVRRGKMHVVRAEHDN 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMEARNLFWCPVCQ 263 >gi|256392598|ref|YP_003114162.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] gi|256358824|gb|ACU72321.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] Length = 262 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 98/292 (33%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + D+ L +LR P ++ G++++ R K+L Sbjct: 1 MPEGDSVFRTAAQLHEALAG----DV-LAVSDLR--VPSLATSDLTGRRVLQTVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG+L++ HL M G + + T + L NT Sbjct: 54 LTRLEGDLTLHTHLRMEGRWAVYRTGERWTGGPGW--QIRAVLGTARNT-------AVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R +DL+ TS + + L L ALL+Q+ +AG+ Sbjct: 105 RLQVVDLLPTSEEPTIVGHLG-PDLLGPDWDAEEALRRLSADPARPLGLALLDQRNLAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A++ P R + L + G + D Sbjct: 164 GNVYANELSFLARVPPWRPVGEVPGLEKVVDTAHRLLTLNRLRTGH---VTTGETRADRR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + VYG+ +PC CG I R ++C CQ Sbjct: 221 N------------WVYGRARQPC-RRCGTRILTSSLGTPPKDRVIYFCPNCQ 259 >gi|314963764|gb|EFT07864.1| formamidopyrimidine-DNA glycosylase protein [Propionibacterium acnes HL082PA1] Length = 299 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 105/288 (36%), Gaps = 23/288 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDAGPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + ++ + + Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMG 249 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 250 RPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|227541406|ref|ZP_03971455.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182957|gb|EEI63929.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] Length = 259 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 94/294 (31%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF G ++ID K L Sbjct: 1 MPEGHVIHRLARTLTDTFGGKP---VDVSSPQGRFSTEADV---LNGAELIDAFAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G I +HLG+ G F + + R+ D Sbjct: 55 FIRFAGERYIHIHLGLIGKFKVAPLAAP--------------------VGVVRLRIADGE 94 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + + + + + AL++Q + AG+ Sbjct: 95 MAADLHGPQWCRLVLKSDVEKAVEKLGSDPLENGAIAPNLARVGRTIGAALMDQSLYAGV 154 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+R ++SP ++ + ++ +++ G Sbjct: 155 GNIYRCEVLFRQRISPFAPAVAVDG---------QAIWDDLVQLMEYGARTGRIDTVRAE 205 Query: 241 HIDGSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H + G VY + G+PCL CG + V GR ++C CQ Sbjct: 206 HSPEAQGRPPREDAHGGEVYVYRRAGQPCL-VCGTPVEMTVDGGRKLYWCPTCQ 258 >gi|269127507|ref|YP_003300877.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] gi|268312465|gb|ACY98839.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] Length = 259 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 111/292 (38%), Gaps = 40/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T + P + + RG+++ + R K+L Sbjct: 1 MPEGDTVWLAARRLHRALAGWALTVCDVR-------VPRYATTDLRGQRVREAVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++G LS+ VHL M G ++I P+ + + ++L N + Sbjct: 54 LIRVDGGLSVHVHLKMDGRWLIRPAG-----PVPRDHRIRLALGNERHL-------ALGY 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G ++++ T+ + + + + + A+++Q ++AGI Sbjct: 102 RLGVVEVLPTAAEECAVGHLG-PDLLGPDWDPQEAVRRLRARPERAIGEAVMDQSVLAGI 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + + P R L+ L+ ++L + G Sbjct: 161 GNIYKSELCFLRGVHPWRPVAEAGD--------LHALVDLAHRLLEANKNRHG------- 205 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 H+ VYG+ G PC CG I + Q R TF+C CQ Sbjct: 206 HVTTGDLRPGRTHWVYGRAGRPC-RRCGARIEQAEQGPPGWERLTFWCPGCQ 256 >gi|313813496|gb|EFS51210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL025PA1] gi|327334147|gb|EGE75861.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 299 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 23/288 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDSAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + ++ + + Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMG 249 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 250 RPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|226227831|ref|YP_002761937.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] gi|226091022|dbj|BAH39467.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] Length = 295 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V I L + + + +H + SA ++I+ V R K + Sbjct: 1 MPELPDVMIYVERLEATVVGQAPSAVRVHNPFVLRSVTPPLSAF-EHREILGVRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ +++VHL ++G K ++ + T + + Sbjct: 60 VLQFTEEFALVVHLMIAGRLRWRPPDKRIAGKL---ALASLEFAHGT----LYLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + V+ Q L P A L +N +K +L + ++++GI Sbjct: 113 RRASLHAVQGVPSLQSFDRGGLEPLTCTVGELATVLRA----ENHTIKRSLTDPRLLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP+ T L + + +L +Q L D + Sbjct: 169 GNAYSDEMLHAAQLSPMVLTSRLGDED------IARLHAAMQHTLRTWTDRLRQETGN-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ F + +V+G+ G+ C C ++RI A T YC CQ Sbjct: 221 GFPETVTAFHDEMAVHGRFGKAC-PVCAAPVQRIRYADNETNYCARCQ 267 >gi|229493198|ref|ZP_04386990.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229319929|gb|EEN85758.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 265 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 100/287 (34%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF + G + K+L Sbjct: 1 MPEGHTLHRLARLHARKFVGSPVRVLSPQGRF---AEDARLVDGHVLTSSDAWGKHLWHT 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + L++ VHLG+ G F + Q + T+ + Sbjct: 58 YDNGLTVHVHLGLYGKF--TDAALPMEEPVGQVRMRMVGADFGTDLRGPTACEVLLP--- 112 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 113 ---------PQVAAIEARLGPDPLRRDADPEKAWLRISKSKTAIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++P R + T + ++ +++ + G + H + Sbjct: 164 YRAELLFRHGINPERPGNLVSHGEWT------AMWADLVELMKVGVRRGKMHVVRAEHDN 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMKARNLFWCPVCQ 263 >gi|227487698|ref|ZP_03918014.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092392|gb|EEI27704.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] Length = 259 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 94/294 (31%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF G ++ID K L Sbjct: 1 MPEGHVIHRLARTLTDTFGGKP---VDVSSPQGRFSTEADV---LNGAELIDAFAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G I +HLG+ G F + + R+ D Sbjct: 55 FIRFAGERYIHIHLGLIGKFKVAPLAAP--------------------VGVVRLRIADGE 94 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + + + + + AL++Q + AG+ Sbjct: 95 MAADLHGPQWCRLVLKSDVEKAVEKLGSDPLENGAIAPNLARVRRTIGAALMDQSLYAGV 154 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+R ++SP ++ + ++ +++ G Sbjct: 155 GNIYRCEVLFRQRISPFAPAVAVDG---------QAIWDDLVQLMEYGARTGRIDTVRAE 205 Query: 241 HIDGSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H + G VY + G+PCL CG + V GR ++C CQ Sbjct: 206 HSPEAQGRPPREDAHGGEVYVYRRAGQPCL-VCGTPVEMTVDGGRKLYWCPTCQ 258 >gi|54023295|ref|YP_117537.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54014803|dbj|BAD56173.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 265 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 101/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G+ + K+LL Sbjct: 1 MPEGHTLHRLAERHQRVFAGGPVRVSSPQGRF---AEGAALVDGRVLARCEAHGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + VHLG+ G F A P V + + T R P Sbjct: 58 YEHGPVVHVHLGLYGKFY-----DAPVPMGPPVGEVRMRMVGATEGTDLR----GPAACE 108 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + E + LGP+P + + + + L++Q+++AG+GN+ Sbjct: 109 VLTPPEVDALLE-----RLGPDPLRADADPDRAWQRIRRSRRPIGALLMDQRVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R L + ++ ++ ++ G + H Sbjct: 164 YRAEVLFRHGISPYRPGVDLDAAEW------KAIWADLVDLMPIGVETGRMHVVRPEHDH 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + G C CG I V GR+ F+C CQ Sbjct: 218 GEPSYAPDRPRTYVYRRPGAGC-RVCGSPIAHAVLDGRNLFWCPTCQ 263 >gi|72161098|ref|YP_288755.1| DNA repair hydrolase [Thermobifida fusca YX] gi|71914830|gb|AAZ54732.1| putative DNA repair hydrolase [Thermobifida fusca YX] Length = 292 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 109/300 (36%), Gaps = 25/300 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + RF + G+ + + K+L + Sbjct: 1 MPEGHTLHRLAIHFTKTFGGQRVRAASPQGRF---AEGAQRIDGRVLGEAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN---------TKKYRV 114 + + VHLG+ G++ + + + P+ T T R+ Sbjct: 58 FDSGEWVRVHLGLYGAWTFGDATGERSLGAPRTEAGTERALQRDADGFVVPPPPTGAVRL 117 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + + LGP+P + + + + + Sbjct: 118 RLVSADAWADLRGPSACEVIDPAGKQAVQARLGPDPLRADADPAAAWQKIRRSRTAIAVL 177 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L+ Q ++AG+GNIY E+L+RA + P R R L + L ++ +L D + Sbjct: 178 LMRQDVIAGVGNIYRAESLFRAGIDPYRPGRDLTEPQW------EALWADLVHLLRDGVR 231 Query: 231 AGG--SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ ++ G + A V +TG+PC C IR AGRS ++C CQ Sbjct: 232 DGRIITTRPEHRTHPGPDIPREEAHYVAYRTGQPC-RVCSTPIRSAELAGRSLYWCPGCQ 290 >gi|302920238|ref|XP_003053028.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733968|gb|EEU47315.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 376 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 109/311 (35%), Gaps = 39/311 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDF---PHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + + KN+ AA GK+I+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIGDKNVFGKVGTSGEEVEAALEGKEIVSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA---------KPIKNPQHNHVTISLTNNT 107 KY I LE +++H GM+G I+ A Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEKTAYTNYYKKMKDSELEQWPPKFWKFQFKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKK 163 + V + D RRFG + LV+ P + F YL + + Sbjct: 121 GSPGVEVAFTDARRFGRVRLVDCPGDQIRKYSPLVENGPDPVVDLDRFTEDYLRGKMRAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + + T LYK+I+ + Sbjct: 181 HVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDEFDDSQVT---TLYKMIRYVC- 236 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-----PCLSNCGQMIRRIVQAG 278 + V G F + + G+ G+ + I G Sbjct: 237 -------------QTAVDKLGDSDEFPEHWLFNYRWGKGSKGTATKLPNGEKLAFITVGG 283 Query: 279 RSTFYCTYCQK 289 R++ Y QK Sbjct: 284 RTSCYAPGVQK 294 >gi|299755916|ref|XP_001828971.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] gi|298411439|gb|EAU92978.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] Length = 370 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 115/316 (36%), Gaps = 46/316 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ L V K +T + + + F F + + D R K Sbjct: 1 MPELPEVQRAVNTLKHVAKGKRITKVVTYPDPIVFNATTNEEFGKELENRTVSDAKRYGK 60 Query: 59 YLLIELEGNL-SIIVHLGMSGSFIIE----------HTSCAKPIKNPQHNHVTISLTNNT 107 ++L+G ++H GM+G ++ ++ P+ + L N T Sbjct: 61 VFYLDLDGKGKKPVLHFGMTGMLHVKGVKPMHYKEAPRKDSEDTWPPRFCKFILHLQNPT 120 Query: 108 ----NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 + V + D RR + L + ++ + P+ LG +P + + + K+ Sbjct: 121 GSSNGEPETEVAFIDARRLARIRLCTSPMEER--PISELGFDPLLSMPSLETFSRTVLKR 178 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q AG+GN E L+ A++ P ++ +L L L I Sbjct: 179 SCPIKALLLDQSFSAGVGNWVADEVLYHARIHPEQRCNTLTTEQ------LKNLHHCIVY 232 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK--TGEPCLSNC--------GQMIRR 273 V A+ +D F + + G+ S I+ Sbjct: 233 VCQTAV-----------DVDADHKLFPENWLFGHRWNKGKKSFSVKPLMLPSGSKATIKW 281 Query: 274 IVQAGRSTFYCTYCQK 289 I GR++ Y Q+ Sbjct: 282 ITVGGRTSAYVPELQR 297 >gi|302537302|ref|ZP_07289644.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446197|gb|EFL18013.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 270 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 23/259 (8%) Query: 30 RKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 +LR P +A G+ ++DV+ R K+LL LEG L++ HLGM G++ + K Sbjct: 25 HADLR--VPRFATADLTGRTVLDVTPRGKHLLTRLEGGLTLHSHLGMDGAWRLFAPG-EK 81 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P H + T T YR+ ++L+ T+ + + + Sbjct: 82 WRGGPSHEIRAVLSTAGTTAVGYRL--------PVLELLRTADEARAVGHLG-PDLLGPD 132 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 A + L ALL+Q+ +AGIGNIY CE + A+++P Sbjct: 133 WDEARAAANLLADPGRPLGEALLDQRNLAGIGNIYKCELCFLAQVTPWTPVG----ALPD 188 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 P L ++ Q++L GG+ G VYG+ PCL CG Sbjct: 189 PAATLPRIAAAAQRLLAANTGHGGARNTTGSRRPG------WGLFVYGRAHRPCL-RCGT 241 Query: 270 MIRRIVQAGRSTFYCTYCQ 288 +R Q R T++C CQ Sbjct: 242 PVREAPQDDRPTYWCPRCQ 260 >gi|299138806|ref|ZP_07031984.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] gi|298599442|gb|EFI55602.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] Length = 299 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 101/306 (33%), Gaps = 32/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E I R + + N RF + G+K+ V + K+L Sbjct: 1 MPEGNE---IHRWAERHTTAFVGKKMHVEAPNGRFRE----ADVLDGRKLERVMAKGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSF------IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + VHLG G + + E + P + + Sbjct: 54 GYVFGKDRILHVHLGRYGDWTEGQMPLPEERGALRVRMWPVGAKARKDAAEASTRHGWYS 113 Query: 115 IYN--DPRRFGFMDLVETSLKYQYPPLRTLGP--------EPADNSFNAIYLTHQFHKKN 164 + +P +D +E + + K Sbjct: 114 SDDGSNPTPPEEIDWLELRGASDCSLWTDAQWETLLARLGPDPLDGDDPKPAFEHIAKAK 173 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + + L+ Q +++GIGNIY E L+RA+LSP ++ P L + ++ + Sbjct: 174 TPIGVLLMQQDVLSGIGNIYRAELLFRARLSP------FVEGRTVPMKTLQAMWKDSIPL 227 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 L + G + A VY + G+PC CG + R AGR+ + Sbjct: 228 LRAGMIDRRIVTTKPKDRPHKTGKPLKEEAHYVYRRHGKPCF-VCGTKVLRKDVAGRTLY 286 Query: 283 YCTYCQ 288 +C CQ Sbjct: 287 WCPVCQ 292 >gi|320108191|ref|YP_004183781.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] gi|319926712|gb|ADV83787.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] Length = 305 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 100/307 (32%), Gaps = 32/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE E I R I + RF +A +K+ V K+ Sbjct: 1 MPEGNE---IHRWAERHNAAFAGKKIRVDAPEGSRFQD----AALVDNRKLEKVIAVGKH 53 Query: 60 LLIELEGNLSIIVHLGMSGSF----------------IIEHTSCAKPIKNPQHNHVTISL 103 L + + + +HLGM G F + K P + Sbjct: 54 LGYDFGKDRILHIHLGMYGDFSEGTGPLPPEKGALRVRLYDAQAIKGPVEPGESKRHAWY 113 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 +N+ T + Q+ L N A + + Sbjct: 114 SNDDGTGHIEAAKVAWVELRGPTDCSVFSQQQWEALEARLGPDPLNGDPATKFVEKVRAR 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + + L++Q I AG+GNIY E L+RAKL P ++ + I Sbjct: 174 KTAVAALLMDQTIAAGVGNIYRAELLFRAKLDPFTPGNAVSEKTLEAIWK-----DAIPL 228 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + +D + + G + A VY + G+PCL CG I V AGR+ Sbjct: 229 MKAGMVDRRIITTKPKDRPTKKTGLPLKEEAHYVYRRQGKPCL-ICGTKILTQVMAGRNL 287 Query: 282 FYCTYCQ 288 F+C CQ Sbjct: 288 FWCPNCQ 294 >gi|311893869|dbj|BAJ26277.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 263 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 100/289 (34%), Gaps = 34/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + ++ L + +T P H +A G+++++ R K+L Sbjct: 1 MPEGDSIYLVATQLNRALSGHPLTASDFR-------VPAHATADLTGRRVLETVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG +++ HL M G + V + N T Sbjct: 54 LTRFEGGVTLHTHLRMDGRWQTFQPGERWRSGPAFQIRVVLGTGNGTA---------VGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + L+ T+ +++ + A L ALL+Q ++AGI Sbjct: 105 RLPVVQLLRTAEEHRVVGHLG-PDLLGPDWDAAEARRRLLADPRRPLGAALLDQHVLAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A ++P L + L Q + + + G + D Sbjct: 164 GNVYANELPFLAGVTPWLPVGDLPDPD-------ELLDGARQLLDANRLRPGHVTTGDP- 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-GRSTFYCTYCQ 288 + VYG+ PCL CG IR R+ ++C CQ Sbjct: 216 -------RPGHRNWVYGRARRPCL-RCGTPIRTAKHDRERAAYWCPRCQ 256 >gi|301300324|ref|ZP_07206529.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852060|gb|EFK79739.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 133 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + +KNALL+Q IVAG+GNIY E LW +K+ P L + + L I Sbjct: 11 RKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEE------VKVLRDNII 64 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 K L A +AGG+++R Y G FQ + Y +TG+PC CG I+RIV R T Sbjct: 65 KELALATEAGGTTIRSYTDAFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTH 123 Query: 283 YCTYCQ 288 +C CQ Sbjct: 124 FCPKCQ 129 >gi|239941135|ref|ZP_04693072.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 15998] gi|239987613|ref|ZP_04708277.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 11379] gi|291444576|ref|ZP_06583966.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291347523|gb|EFE74427.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 277 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 96/286 (33%), Gaps = 20/286 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G + K+L + Sbjct: 1 MPEGHTIRRLADDHTERFAGAPVRVSSPQGKF---SDSAALLDGHTLTTADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P V + L N + R G Sbjct: 58 FGDTGWVHIHLGLFGKL-----GFGAAPPPPPTETVRLRLVNAGHYADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITEPEKRAIHERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 Y E L+R + P R R L + L +L++E + L + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRAEWDTVWADLVELMREGVRNNRI-DTVRPEHLPEAMGR 222 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 223 PPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|225872458|ref|YP_002753913.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792139|gb|ACO32229.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 313 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 109/334 (32%), Gaps = 67/334 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E I R + + + N F + G+K+ V K+L Sbjct: 1 MPEGNE---IHRFAERHAAALAGGRVSVDSPNGAFPD----AEVLHGRKLQAVEAYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + VHLGM G F P+ + + L N N + R Sbjct: 54 GYVFGRDTILHVHLGMYGDFR-----EGAMPLPPEKGALRLRLWNRANWVELR------- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G D + + LGP+P + ++N+ + L++Q + AGI Sbjct: 102 --GATDCSIFDGEKWQALVARLGPDPLRPESDPEPGFAIIARRNTPIGQLLMDQSVFAGI 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLI--------DAIDA 231 GNIY E L+RA L P R + + + KL+ A+ Sbjct: 160 GNIYRAEFLFRAGLHPRTPGREVPRPSIAGIWKDARKLMPLGMIDRRIVTTLAKDRALKR 219 Query: 232 GGSSLRDYVHIDGSIGYFQNA------------------------------------FSV 255 G + +D G + V Sbjct: 220 GPETNQDRALKRGEKTDSARSRKREATMDKASPRKRGGATADQAIPHQRGPAQDDQIHYV 279 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G+PCL CG I + AGR+ ++C CQK Sbjct: 280 YRRHGKPCL-RCGTKIEKEEMAGRTVYWCPACQK 312 >gi|315443627|ref|YP_004076506.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315261930|gb|ADT98671.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 264 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 101/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + A G+ + + K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRF---VDGATAVNGRVLKKATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ GSF + P + + + G Sbjct: 58 YDGGRVVHVHLGLYGSFT-------EWPLPPLLPVGQVRMRMVGTEYGADLR-------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + +K + L++Q ++AGIGN+ Sbjct: 104 PTVCEVIDEPEIADIVARLGPDPLRPDADPSLAWRRINKSRRPIGALLMDQSVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R S+ N L ++ ++ + G + H Sbjct: 164 YRSELLFRHRTDPFRPGTSVTANEFD------ALWTDLVALMKVGVRRGKIVVVLPEHDH 217 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R + R+ F+C CQ Sbjct: 218 GAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEARNLFWCPNCQ 263 >gi|302659016|ref|XP_003021203.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] gi|291185091|gb|EFE40585.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] Length = 373 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 93/305 (30%), Gaps = 43/305 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GM+G I + + L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENFEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 K + D RR G + LV+ P +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++G+GN + +L I V Sbjct: 181 VPIKALLLDQANISGLGNWMGDTL---------------------RDSQIKELHSSINYV 219 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++D G S F + ++ GK G G+ I + GR++ Sbjct: 220 CSVSVDLKGESSDFPTDW-----LFHHRWNK-GKKGAAGKLPSGEPIVFVTVGGRTSAVV 273 Query: 285 TYCQK 289 QK Sbjct: 274 PSVQK 278 >gi|302866006|ref|YP_003834643.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315502566|ref|YP_004081453.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|302568865|gb|ADL45067.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315409185|gb|ADU07302.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 273 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 96/292 (32%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + G + + + R K+L Sbjct: 1 MPEGDTVWNTARVLQRALAGARLTGSDFR-------VPQLATTDLTGWTVRESASRGKHL 53 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ L ++ HL M G++ + P H + + Sbjct: 54 LLRLTRTDAEPWTLHSHLRMDGAWRAYAPG-ERWSGRPAHLIRVV--------LRSPAAV 104 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + LV T+ + + + + + ALL+Q+ Sbjct: 105 AVGYHLHELALVPTAEEESLVGHLG-PDLLGPDWDADEAVRRLAADPDRTIGEALLDQRN 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y CE L+ +SP ++ GT L + S Sbjct: 164 LAGVGNLYKCEVLFLRGVSPWTPVGAVPDLTGTVALAQRLLAANRGRWTQ--------ST 215 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +H G+ VYG+ +PC CG IR+ R T++C CQ Sbjct: 216 TGVLHRGGTS-------YVYGRRAQPC-RRCGTAIRKEELGERVTYWCPACQ 259 >gi|312140746|ref|YP_004008082.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325675614|ref|ZP_08155298.1| endonuclease VIII [Rhodococcus equi ATCC 33707] gi|311890085|emb|CBH49403.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325553585|gb|EGD23263.1| endonuclease VIII [Rhodococcus equi ATCC 33707] Length = 265 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 100/293 (34%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T+ + P + + G+ + V R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGRVLTECDIR-------VPRYATVDLSGEAVDAVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +I HL M GS+ + + P H + T +T + + Sbjct: 54 LTRIGAH-TIHTHLKMEGSWQVYPRGA--RWRRPAHQARIVLGTEDTVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++V+ S + + A+ ++ + ALL+Q+I+AGI Sbjct: 105 --GITEVVDRSDEESVVGHLG-PDLLGADWDAAVATSNLVAAGERPIGEALLDQRIMAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P T + L + Sbjct: 162 GNVYRNEICFLRGVDPRTPTARVPDLPKVVDLAHRVLRANRDR------------PVRVT 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 D G VYG+ G+PCL CG I RS F+C CQ Sbjct: 210 TGDRRPGRRD---WVYGRGGKPCL-RCGTPIAAAEFGEEPGRERSIFWCPNCQ 258 >gi|227495344|ref|ZP_03925660.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] gi|226831214|gb|EEH63597.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] Length = 274 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 26/293 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R ++ + + + RF G +I S K++ I+ Sbjct: 1 MPEGHVIHRLTARLLADFGGYSLEVLSPQGRFADSAEL---LSGLQITGSSSWGKHIFIK 57 Query: 64 LEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + VHLG+ G + P + + L ++ + Sbjct: 58 FGEEPDELARWLHVHLGLYGKWRFYPLDVFGNPPAP-KGEIRLRL----VGREEVADLSG 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P R + E + ++ + + + +++Q +VA Sbjct: 113 PTRCAVVSYDEVLDVLKRLG----PDPLVNHPADRAEFIRLVRARKRAIGELVMDQSVVA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID--AGGSSL 236 G GNIY E L+R +SP RK ++ + L L +++ L+D ++ + L Sbjct: 169 GPGNIYRAECLFRVGISPFRKGSNISEKR------LGLLWDDLRAGLLDGLETGFISTML 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + F VY +TG PCL CG M+ + R F+C CQ+ Sbjct: 223 EEDLRAEDPEDVEAQRFYVYHRTGRPCL-RCGSMVAEQLMQNRRLFWCPGCQR 274 >gi|296168906|ref|ZP_06850575.1| endonuclease VIII [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896375|gb|EFG76028.1| endonuclease VIII [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 251 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 92/289 (31%), Gaps = 38/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAALLRQHLVGRTLTRCDVR-------VPRYATVDLTGEAVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + + P + + Sbjct: 54 FIRVGPAS-IHSHLKMDGSWRV--------GERPVRVDHRARIVLEAGGVRAV-----GV 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G ++++E + ++ + + + L LL+Q+++AGI Sbjct: 100 DLGVLEILERDRDAEAVAHLG-PDLLGEDWDAGLAAANLAAHPDRPLAETLLDQRVLAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P ++ + L + Sbjct: 159 GNVYANELCFVSGRLPTAPVSAVGDPHRLVSRARDMLWLNRFRWNRC------------T 206 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+ C CG I R T++C CQ+ Sbjct: 207 TGDTRTGR---QLWVYGRAGQRC-RRCGTRIDYDGSGDRVTYWCPPCQR 251 >gi|171915668|ref|ZP_02931138.1| formamidopyrimidine-DNA glycosylase [Verrucomicrobium spinosum DSM 4136] Length = 266 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 107/291 (36%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EV + K V+ + LH + R G + ++ K Sbjct: 1 MPELAEVYYYAKQWA-AGKGKPVSRVELHAKSRVFRGCDTGELEEGLNGAALKEILTHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGM+G + +P + +H+H+ + L + +I+ D Sbjct: 60 QMLFKFSRGQWLAVHLGMTGETRV----APQPYEAAKHDHLVLHLRD------RALIFTD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG + + + + +D A+ LK LL+Q+ Sbjct: 110 PRQFGLVQYHQGNALPE-FWQALPPEIGSDAFTTALLTGVLQRHARVPLKMLLLDQRYFP 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E +W+ KL P + SL + L + ++KV A+D G D Sbjct: 169 GVGNWMADEIMWQMKLPPATPSGSLTGKQ------VTALHRTVKKVCKGAMDTVGVDWSD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ Y C + R GR+ +C CQK Sbjct: 223 P---------PQDWLFRYRWEDGHVCPRCQAELVRESLRGRTACWCPVCQK 264 >gi|296139126|ref|YP_003646369.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] gi|296027260|gb|ADG78030.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 23/287 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF + G++ + K+L Sbjct: 1 MPEGHTLHRLALDHDRRFGGETVRVASPQGRFAAE---AKRLDGREFLGADAWGKHLWHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G L++ VHLG+ GSF V + + + R G Sbjct: 58 YDGGLTVHVHLGLYGSF--ADFELLDGAPPAPVGQVRMRIVGPRDGTDLR---------G 106 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 S + L LGP+P + + + + L++QK+VAG+GN+ Sbjct: 107 PTACHLVSEEQIDEVLARLGPDPLRADADPDPAWRRISRSRRPIGALLMDQKVVAGVGNV 166 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA L P R+ R+L + + + ++ ++ ++ G + Sbjct: 167 YRAEVLYRAGLDPHREGRALGREDFDG------IWADLVALMPIGVERGRMHVVRAEDDH 220 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GEPC C +R V R+ ++C CQ Sbjct: 221 GAPSYAPDRPRTYVYRRAGEPC-RVCRTPVRTEVMEARNLYWCPTCQ 266 >gi|325676024|ref|ZP_08155707.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553262|gb|EGD22941.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 265 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 103/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGSPVRVSSPQGRF---AEDAALIDGRVLVRSDAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G F P+ + + + ++P+ Sbjct: 58 YENGLVVHVHLGLYGKFTESPLPLEPPVGQVRMRMAGTEFGTDLRGPTACEVLHEPQVAA 117 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 118 IE--------------ARLGPDPLRADADPDRAWARISKSQTPIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R +++ + + ++ ++ + G + Sbjct: 164 YRAEILFRHGIHPERPGKNVSRAEFD------AMWADLVDLMNVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ Y + G C CG I +V GR+ F+C CQ Sbjct: 218 GDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHVVMKGRNLFWCPGCQ 263 >gi|333027094|ref|ZP_08455158.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332746946|gb|EGJ77387.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 271 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 102/291 (35%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRADSPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT R G Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGWSDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 104 ATACALIDDDAKAAVHARLGPDPLREADDGEAAWARISRSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEVLFRHGIDPARPGRSLSRAEWD------ALWADLRVLMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|145223169|ref|YP_001133847.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145215655|gb|ABP45059.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 264 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 100/287 (34%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + A G+ + + K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRF---VDGATAVNGRVLKKATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ GSF + P + + + G Sbjct: 58 YDGGRVVHVHLGLYGSFT-------EWSLPPLLPVGQVRMRMVGTEYGADLR-------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + K + L++Q ++AGIGN+ Sbjct: 104 PTVCEVIDEPEIADIVARLGPDPLRPDADPSLAWRRISKSRRPIGALLMDQSVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R S+ + L ++ ++ + G + H Sbjct: 164 YRSELLFRHRTDPFRPGTSVTADEFD------ALWTDLVALMKVGVRRGKIVVVLPEHDH 217 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R + R+ F+C CQ Sbjct: 218 GAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEARNLFWCPNCQ 263 >gi|284030196|ref|YP_003380127.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] gi|283809489|gb|ADB31328.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] Length = 299 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 105/289 (36%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + ++ + RF +A G+ + K+ Sbjct: 1 MPEGHTLHRLANDVWDAFGGRV---VRASSPQGRF---VDGAALLDGRVLRHTEAHGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + EG + +HLG+ G +P+ V + L N+ Y D R Sbjct: 55 LADFEGGGWLHIHLGLIGKVDFGSAPIPEPV-----GQVRLRLQNDAA-------YADLR 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +++ + + LGP+P + + + + + L++Q++++G+ Sbjct: 103 GATVCEVLTDGEREA--LIGRLGPDPLRDDADPDLAWKRIQRSKLPIGRLLMDQEVLSGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+RAKL P+ + + + + + + Sbjct: 161 GNVYRAEVLFRAKLHPMTPGNLVRKREWQGMWTDLLELMKYGVETGRIDTVTDDHTPEAM 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D VY + G+ C C +IR + AGR+ F+C CQ+ Sbjct: 221 GRDPRRDDHGGEVYVYRRHGQHC-HVCDSVIRTELLAGRNLFWCPKCQR 268 >gi|30695252|ref|NP_849798.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana] gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis thaliana] gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 274 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 103/274 (37%), Gaps = 25/274 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + N P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K ++ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ + P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLL--ANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ SL + L I++V+ A+ Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSLSKEQ------CEALHTSIKEVIQHAV----- 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 ++ F + + + G+ G Sbjct: 228 ------QVNADSKEFPVEWLFHFRWGKKAGKVNG 255 >gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 25/272 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 + ++L+ GM+G+ I+ + K ++ + S + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+E PP+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLE--DPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AGIGN E L+ A++ P++ SL + L Q I++V+ A+ Sbjct: 179 SYIAGIGNWLADEVLYHARIHPLQVASSLTRE------SCETLHQCIKQVIQYAV----- 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 +D F + + + G+ L Sbjct: 228 ------EVDAECSLFPLEWLFHFRWGKKSLRK 253 >gi|322711093|gb|EFZ02667.1| formamidopyrimidine-DNA glycosylase [Metarhizium anisopliae ARSEF 23] Length = 372 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 71/306 (23%), Positives = 114/306 (37%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDF---PHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + + N+ AA RGK+++ + Sbjct: 1 MPEIAEVARIVHFLRLHLVGRKIASASAIDDSNVFGKVGTTGAEVEAALRGKQVVSAGNQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---------QHNHVTISLTNNT 107 KY I L+ +++H GM+G I A Sbjct: 61 GKYFWITLDKPPHLVMHFGMTGWVHIRGEKTAYTNYYKKMKDSELTTWPPKFWKFHLKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKK 163 + V + D RRFG + LV+ P + F YL + + Sbjct: 121 GKPEVEVAFTDARRFGRVRLVDCPGADIRKHTPLKENGPDPVIDTDRFTEEYLRGKMQAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + + S + KL + I+ Sbjct: 181 HVPVKALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE------IKKLYESIRY 234 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V A+D G S + H F + + GK L N G+ + I GR++ Y Sbjct: 235 VCQTAVDKLGDSDQFPEHW-----LFNHRWGKGGKGSSSKLPN-GEKLAFITVGGRTSCY 288 Query: 284 CTYCQK 289 QK Sbjct: 289 APKVQK 294 >gi|312140366|ref|YP_004007702.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|311889705|emb|CBH49022.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] Length = 265 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 102/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGSPVRVSSPQGRF---AEDAALIDGRVLVRSDAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G F P+ + + + ++P+ Sbjct: 58 YENGLVVHVHLGLYGKFTESPLPLEPPVGQVRMRMAGTEFGTDLRGPTACEVLHEPQVAA 117 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 118 IE--------------ARLGPDPLRADADPDRAWARISKSQTPIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R +++ + + ++ ++ + G + Sbjct: 164 YRAEILFRHGIHPERPGKNVSRAEFD------AMWADLVDLMNVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ Y + G C CG I V GR+ F+C CQ Sbjct: 218 GDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHAVMKGRNLFWCPGCQ 263 >gi|224134470|ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1| predicted protein [Populus trichocarpa] Length = 307 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 113/306 (36%), Gaps = 46/306 (15%) Query: 1 MPELPEVEIIRRNLMMVMK------------NMTVTDICLHRKNLRFDFPHHFSAATRGK 48 MPELPEVE RR + + + + P F AA GK Sbjct: 1 MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDGV----------SPSDFVAALVGK 50 Query: 49 KIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLT 104 I+ R+ K L ++L+ GM+G+ I+ + K ++ ++ S Sbjct: 51 TIVSALRKGKNLWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKF 110 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + D RRF + L+E PP+ LGP+ L KK Sbjct: 111 FVQLDDGLELSFTDKRRFAKVRLLE--DPASKPPISELGPDALLEPMTVDELHGSLSKKK 168 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q V+GIGN E L++A++ P++ SL + + K Sbjct: 169 VAIKALLLDQSFVSGIGNWIADEVLYQARIHPLQIASSLSRESSATLHKCIK-------- 220 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFY 283 + V + F N + + + + + G+ I IV GR+T Y Sbjct: 221 ---------EVIEKAVEVGADSSQFPNNWIFHSREKKSKKTFIDGKEIDFIVAGGRTTAY 271 Query: 284 CTYCQK 289 QK Sbjct: 272 VPGLQK 277 >gi|326440923|ref|ZP_08215657.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] Length = 269 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 102/292 (34%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G+ + D K+L + Sbjct: 1 MPEGHTIHRLAEDHRARFLDRPVRVSSPQGKF---SDAAALLDGQPLTDAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + LT R G Sbjct: 58 FGALGWVHIHLGLFGKVDFGDAPA-----PPPTDTVRLRLTTPKAHVDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + + LL+QKI+AG+GN+ Sbjct: 104 PTTCALITDGEKTAVHERLGPDPLRPDDDPDRVWARLSRSRTTVAALLLDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + + ++ +++ + + H+ Sbjct: 164 YRAEVLFRLGIDPYRAGRDITRAEWD------AIWADLVELMREGVRNNRIDTVRPEHMP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG +R A R+ F+C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRDRRPC-HVCGTEVRTAGLAARNLFWCPACQR 268 >gi|134096732|ref|YP_001102393.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133909355|emb|CAL99467.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 275 Score = 105 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 102/279 (36%), Gaps = 20/279 (7%) Query: 10 IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 + ++L +V + + ++ +S G+ + +R KYL ++ L Sbjct: 1 MAQHLRDNATGRSVARVDIASLSVLKTVSPPWSE-LHGRTVTGATRYGKYLDLD-CEGLH 58 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++ HL +G + P K + V ++ L Sbjct: 59 LVFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGGG------VGFDLTEAGTQKKLSA 112 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 ++ P S + LT + +K L +Q ++AGIGN Y E L Sbjct: 113 WVVEDPAEVPGIAKLGPDALSLDVEGLTAVLSGRTERIKTVLTDQSMIAGIGNAYSDEIL 172 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 AKLSP L + + +L ++++L DA++ + + G Sbjct: 173 HAAKLSPYATAGRLDAD------AVERLHATMREILTDAVERSLKQDAARLKAEKRSG-- 224 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+G+TG PC CG +R + A RS YC CQ Sbjct: 225 ---MRVHGRTGLPC-PVCGDKVREVSFADRSLQYCATCQ 259 >gi|311740281|ref|ZP_07714112.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304664|gb|EFQ80736.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 105 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 94/288 (32%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RF G++I K+L + Sbjct: 1 MPEGHVIHRLANKFNADFRGMPLRVTSPQGRFAAEAEL---LDGERIELAETYGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G E + + + N R Sbjct: 58 FSAQDPRHILYIHLGLIGKLRFEPREET-------GGQIRVRIDNGAEAANLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 --GPQFCRLLTEEEYRAQLAKVGQDPLRTDADVEALWAKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R LSP R + + + E + + Sbjct: 162 GNIYRAETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSPEAM 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG + V GR+ F+C CQ Sbjct: 222 GREPRKDDHGGEVYVYRRAGLPCY-ICGTPVAEKVMEGRNLFWCPTCQ 268 >gi|29831970|ref|NP_826604.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29609087|dbj|BAC73139.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 269 Score = 105 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 102/292 (34%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLADDYEARFGGAAARVTSPQGKF---ADAAALLDGTVLETADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 I +HLG+ G P + V + L N+T+ Y D R Sbjct: 58 FRRADWIHIHLGLFGKVGFGDAPA-----PPPTDTVRLRLANDTS-------YVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + +++ L++QK++AG+GN+ Sbjct: 106 TCALITDGEKRAI--HDRLGPDPLRPDADPARAYDRVSRSRTSVAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L + + ++ ++ + + H Sbjct: 164 YRAEVLFRHGIDPYRTGRELTRREWD------AIWADLVALMREGVRNNRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG IR A R+ F+C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRANLPC-HICGGEIRTAGLAARNLFWCPTCQQ 268 >gi|225629675|ref|ZP_03787657.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591470|gb|EEH12528.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 159 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 7/158 (4%) Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 + + + G EP + F+ YL K N+K+AL++ K + G+GNIY E+L+ Sbjct: 8 NKEQETDFFSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGVGNIYASESLF 67 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 RA++SP+R ++L KL EI+ L DAI AGGS+L+DY GS GYFQ Sbjct: 68 RARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSAGYFQ 121 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 N F VYGK +PC C +I I Q GRST++C CQ Sbjct: 122 NNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 158 >gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 287 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 22/286 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EVE R+ + VT + LH K R P A G + AK Sbjct: 1 MPELAEVEFFRKRWDHAARGRRVTAVRLHPHAKIFRGTSPSTLRHALTGAVLESSDAAAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGMSG +E C +H+H+ + +T K+ +++ND Sbjct: 61 QMLFRFSDEIWLGVHLGMSGELRVEPAGCP----AGRHDHLVL------DTAKHALVFND 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR FG + L + + + P + A + + +K LL Q+ Sbjct: 111 PRMFGRVLLHRGAEPPVW-WTKIAPPILSAAFTPAAVREFLHRRGRAPIKAVLLMQERFP 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN E LWRA + P SL + L++ + + ++ +D I G SL Sbjct: 170 GIGNWMADEILWRAGIHPRTAAGSLTEAQSK---TLWREARHVCRMALDTIAGRGRSLPR 226 Query: 239 YVHID-GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 ++++ F + + G+ G ++ R GR+T + Sbjct: 227 DLNVNIPDTWLFHHRWQPGGR-----CPRTGVLLERAEIGGRTTCW 267 >gi|254482652|ref|ZP_05095890.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] gi|214037011|gb|EEB77680.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] Length = 132 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 10/135 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K+ V + + LR+ P +G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHVKDQRVKRLLVREGRLRWPIPPDLPGLLQGQRIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +++VHLGMSGS + S + +H+H I L + YNDPR Sbjct: 61 LFHT-AAGALLVHLGMSGSLRLVPPS----QQPARHDHFDIELAGGN-----VLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQ 135 RFG V + Sbjct: 111 RFGCCLWVAHGESHA 125 >gi|318060115|ref|ZP_07978838.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actG] gi|318076316|ref|ZP_07983648.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actF] Length = 271 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 103/291 (35%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRAASPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT R G Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGWSDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 104 PTACALIDDEAKAAVHARLGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEVLFRHGIDPARPGRSLSRAEWD------ALWADLRVLMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|148272640|ref|YP_001222201.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830570|emb|CAN01505.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 329 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 114/341 (33%), Gaps = 66/341 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I + + RF +A G++++ K + Sbjct: 1 MPEGHSIHRIAKQFEAHFVG---DVVQASSPQGRF---AEGAAVLDGRRLVAARAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH-----------------TSCAKPIKNPQHNHVTISL 103 +E +G++ + VHLG+ G++ + P + SL Sbjct: 55 FLEFDGDVWLRVHLGLYGAWDFAGDVSTLNRMGQNGMRGDVPVDDRVGDAPVDSDAEDSL 114 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKY----------------------------- 134 + ++ R+ + + E Sbjct: 115 ASIGAPRRARLRMAEQEKVHDPFSAEAWPPEPVGQVRVRLLTEHAVADLRGPTACVVASP 174 Query: 135 ----QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 Q P + T KK + + L++Q +V+GIGN+Y E L+ Sbjct: 175 EEVQQAIDKLGPDPLVDGGKRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAELLF 234 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI---DGSIG 247 RA+ +P R P+D++ L ++ K+L ++ G D + D ++ Sbjct: 235 RARQNPHTPGRD------VPEDVVRGLWKDWSKLLRKGVEVGQMMTMDGLRGKRLDAALR 288 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG I AGR ++C YCQ Sbjct: 289 NRADRHWVYHREGLPC-RVCGTNIVMEEAAGRKLYWCPYCQ 328 >gi|240170935|ref|ZP_04749594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 109/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHHRRFAGAPVAVSSPQGRFADS---AAAVDGRVLRRTSVWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F A P+ P V + + R Sbjct: 58 YSGGGIVHVHLGLYGAFTEWERPAADPLPEPV-GQVRMRMVGAAFGSDLR-------GPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ S + + LGP+P + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDESQVAEV--VARLGPDPLRRDADPSWAWARIMKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + + + ++ ++ + G H Sbjct: 168 YRSELLFRHRIDPYRAGQRITEAEF------AAAWTDLVALMKVGLRRGKIIAVRPEHDH 221 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R GR+ F+C CQ Sbjct: 222 GAPSYRPDRPRTYVYRRAGDPC-RLCATTVRTAELEGRNLFWCPTCQ 267 >gi|314968408|gb|EFT12506.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL037PA1] Length = 299 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 114/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWL------AMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C+ CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCSRCQR 296 >gi|237785613|ref|YP_002906318.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758525|gb|ACR17775.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] Length = 269 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 104/297 (35%), Gaps = 38/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + +L + + RF + K+L Sbjct: 1 MPEGHVIHRLASSLNREFAGQ---ETAVSSPQGRFATEAD---QLNHTVLKHAEAHGKHL 54 Query: 61 LIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 I+ E N + +HLG+ GS + + V + + ++T R Sbjct: 55 FIDFEANQAAHVVYIHLGLIGSLRFSDLAEPR-------GQVRLRIASDTRAADLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + + + LG +P D + + + + + L++Q I Sbjct: 104 -----GPQWCRLITDEEKDTAIGKLGADPLDPHADPSRSYQRIKRSSKPISTLLMDQHIF 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+R L+P + + L ++ L+ + ++ + + G Sbjct: 159 AGVGNIYRAETLFRLGLNPELRGKDLTDDD------LHAIWNDLVETMTMGFRVGKIDTV 212 Query: 238 DYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G PC CG I GR+ F+C CQ Sbjct: 213 RPEHTPEAMGREPRVDAHGGEVYVYRRAGLPCY-VCGTTIVERKVDGRNLFWCPTCQ 268 >gi|317126732|ref|YP_004100844.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] gi|315590820|gb|ADU50117.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] Length = 289 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 108/304 (35%), Gaps = 34/304 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + I + RF +A G+++ S R K+L Sbjct: 1 MPEGHTIHALAARLNRTLGG---EAISVSSPQGRFASD---AAVIDGRRLDQASARGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT-ISLTNNTNTKKYRVIYNDP 119 ++ +L++ VHLG+ G+F ++ P P + + ++P Sbjct: 55 FLD-FDDLTLHVHLGLIGTFHVKPRDPLGPAGTPARLQLEGRRYVAELRGPMICALVDEP 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + + + + + L++Q +VAG Sbjct: 114 TRAAVLAKLGPDPLHAPDVPSGSERG-----------WERISMSRKTIAELLMDQAVVAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRD 238 +GN+Y CE L+R ++ P + R L + L L+ + Sbjct: 163 VGNVYRCEVLFRHRIDPFTRGRDLGRRLWDDVWEDLVTLLPLGMAFSQILTMQDQVAAAA 222 Query: 239 YVHIDGSI-------------GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + DGS +F F Y +TGE C CG+ IR + GR+ ++C Sbjct: 223 EMVADGSSLAITETLSGERLGDHFDRRFHTYKRTGEACD-RCGRRIRAELIGGRTLYWCP 281 Query: 286 YCQK 289 CQ+ Sbjct: 282 GCQR 285 >gi|183983786|ref|YP_001852077.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177112|gb|ACC42222.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 268 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + +F A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVVVSSPQGKFADSAG---AVDGRVLRAASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F S + + +P V + + R G Sbjct: 58 YAGGPVVHVHLGLYGAFTEWARSAGELLPDPV-GQVRMRMVGAEYGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P + + + K + L++QK++AG+GN+ Sbjct: 108 PTVCEVIDDAQVADVLARLGPDPLRKDADPSWAWARIAKSRRPIGALLMDQKVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + + + + ++ ++ + G + H Sbjct: 168 YRSELLFRHRIDPYRSGQRITEAEFSAAWT------DLVALMKVGLRGGKIVVVRPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC CG + V GR+ F+C CQ Sbjct: 222 GAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVLEGRNVFWCPSCQ 267 >gi|297521244|ref|ZP_06939630.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 138 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 11/135 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQ 135 RFG + + Sbjct: 110 RFGAWLWTKELEGHN 124 >gi|262197858|ref|YP_003269067.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] gi|262081205|gb|ACY17174.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] Length = 300 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 107/304 (35%), Gaps = 31/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+L + +T + + + + RG + K+L Sbjct: 1 MPEGDSIHKVARHLRAALGGAIITGVHVRDR-------GELMS-LRGCSAEGIEAVGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-------------HNHVTISLTNNT 107 L+ G + VHLGM G + + ++N + Sbjct: 53 LLRFTGGTGVRVHLGMKGRWRRFDAGDDETLENRWSRFGNRASLVLATRAAAFVCFEAAQ 112 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN- 166 + R + ++ + + +++ I + + S Sbjct: 113 VEVIEALATRGSRHVQRLGPDLLAIGGEAKGAAGGDGDADASAYAEILRRARVPWRRSQA 172 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + LL+Q + +GIGN+Y E L+ ++ P ++ + D L L +E +++ Sbjct: 173 VAELLLDQSVASGIGNVYKSEVLFVCRVHPWQRV------DALEDDALLALYREAARLMR 226 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYC 284 + + G + VYG+ +PC+ CG +IR Q RST++C Sbjct: 227 ANLPLARRATVAPERRGKGGGDLLPRYWVYGRHRKPCM-RCGAIIRVARQGDQARSTYWC 285 Query: 285 TYCQ 288 CQ Sbjct: 286 PRCQ 289 >gi|294812630|ref|ZP_06771273.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294325229|gb|EFG06872.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 101/291 (34%), Gaps = 30/291 (10%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R + + +F +A G+ + D K+L + Sbjct: 60 PEGHTIHRLAEDHRARFLDRPVRVSSPQGKF---SDAAALLDGQPLTDAEAHGKHLFLGF 116 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G P + V + LT R G Sbjct: 117 GALGWVHIHLGLFGKVDFGDAPA-----PPPTDTVRLRLTTPKAHVDLR---------GP 162 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + LGP+P + + + + + + LL+QKI+AG+GN+Y Sbjct: 163 TTCALITDGEKTAVHERLGPDPLRPDDDPDRVWARLSRSRTTVAALLLDQKIIAGVGNVY 222 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+R + P R R + + + ++ +++ + + H+ Sbjct: 223 RAEVLFRLGIDPYRAGRDITRAEWD------AIWADLVELMREGVRNNRIDTVRPEHMPE 276 Query: 245 SIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG +R A R+ F+C CQ+ Sbjct: 277 AMGRPPRVDDHGGEVYVYRRDRRPC-HVCGTEVRTAGLAARNLFWCPACQR 326 >gi|254482665|ref|ZP_05095903.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214037024|gb|EEB77693.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 111 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++QKIV G+GNIY EAL+ + + P R + + +L +++ VL AI+ Sbjct: 1 MDQKIVVGVGNIYANEALFLSGIRPNRAAGRISEAR------YQRLADQVKLVLTSAINH 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD+V DG GYF VYG+ GEPC C + ++ + R+T YC CQ+ Sbjct: 55 GGTTLRDFVGGDGKPGYFAQQLYVYGRGGEPCKH-CSEKLQESRISQRTTVYCVACQR 111 >gi|152964122|ref|YP_001359906.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151358639|gb|ABS01642.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 273 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 108/295 (36%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ R+ + T+ D+ R P A G+ + RR K Sbjct: 1 MPELPEVQSARQVVERGGLFRTIADVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGKS 60 Query: 60 LLIELEGNLSII-----VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK-KYR 113 + + G +HLGMSG + A + + S ++ Sbjct: 61 MWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRESPNPVKEEWYRFT 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D + D P + P + + ++ LK LL+ Sbjct: 121 LDFEDGGQLRLFDKRRLGRVRLDPDVD--ALGPDAELVGREEFRERIGRGSAPLKARLLD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAGIGN+ E LWRA+ SP++ L L +L +E++ + A+ GG Sbjct: 179 QSVVAGIGNLLADEVLWRARASPLKPAGELRAEE------LDELRRELRAAIRHAVRHGG 232 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G C CG + R GR+T++C+ Q Sbjct: 233 VHTGEVVP--------------HRTAGGHC-PRCGAEMVRATVGGRTTWWCSAEQ 272 >gi|163839232|ref|YP_001623637.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952708|gb|ABY22223.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 294 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 28/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + L V++ + + + R + + V R K++ Sbjct: 1 MPELPELVGLSTYLSSVLRGQLLESLQIASFTALKTAGVQPEEILR-RAVESVRRHGKFV 59 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTKK 111 IE + +I HL +G S P+K + + + Sbjct: 60 DIEFGASASDPSGIHLIFHLAKAGWLKYAAKSAGEKPAPVKPGGYITARMIFNDAK---- 115 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + + + + + P + TLGP+P + F L K + +K+ L Sbjct: 116 --IDLTEAGTRKSLAIYLVRSQDEVPGIITLGPDPLSDEFTLEVLKAILAPKRAQIKDVL 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 +QK++AGIGN Y E L A+LSP + SL ++ L Q I+ +L +A++A Sbjct: 174 RDQKMIAGIGNAYSDEILHLARLSPFAASNSLTEDQM------AALYQSIKSILREAVEA 227 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+ +TG+ C CG +R + A R+ YC CQ Sbjct: 228 ASGRPASDLKDTKRSG-----MRVHARTGQDC-PECGDTVREVAFADRTLQYCPRCQ 278 >gi|313808048|gb|EFS46529.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL087PA2] Length = 299 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 112/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRVEGTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATLGKQISHSTWL------AMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|18762494|gb|AAL78073.1| Fpg [Proteus mirabilis] Length = 108 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY EAL+ + + P RK SL + L+ I+ VL +I+ GG++L+D++ Sbjct: 4 IYASEALFASGIMPDRKANSLTEQECDV------LVNAIKTVLTRSIEQGGTTLKDFLQS 57 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 58 DGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 102 >gi|119717704|ref|YP_924669.1| formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] gi|119538365|gb|ABL82982.1| Formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] Length = 282 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLADEITATFAGRV---VRTGSPQGRFADS---AALVDGQVLVGAEAWGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + +HLG+ G + V + + + Sbjct: 55 FIAFPDERFVHIHLGLYGKLDLV---AGVEQVPAAVGQVRLRIVAADRSWHAYADLRGAT 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + GP+P + + + + + L++Q ++AG+ Sbjct: 112 TCELVTR-----EQRDAVVARSGPDPLRADADPGRAWARIRRSKAPIGGLLMDQAVLAGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+R ++ P R +L + ++ ++ + + G Sbjct: 167 GNVYRAELLFRHRIDPQRPGNTLRVGQW------QAMWDDLVVLMREGVRTGRIDTVRPE 220 Query: 241 HIDGSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY +TG+PC CG +R GR+ F+C CQ Sbjct: 221 HTPEAMGRPPRRDDHGGEVYVYRRTGQPC-HVCGATVRTAELQGRNLFWCPRCQ 273 >gi|167948611|ref|ZP_02535685.1| formamidopyrimidine-DNA glycosylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 160 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 11/136 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + ++ V+ I + + LR+ P G+++ V RR KY Sbjct: 1 MPELPEVETTRRGIAPHLEGAAVSGIVVRQPRLRWPVPRKSGVHWLNGQRLNSVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ S+++HLGMSGS + +H+H + NN+ + DP Sbjct: 61 LLL-NFAPGSLLLHLGMSGSLRVLPNGTP----PQRHDHFDLEFDNNS-----LLRLRDP 110 Query: 120 RRFGFMDLVETSLKYQ 135 RRFG + T ++ Sbjct: 111 RRFGAVLWQPTGECHE 126 >gi|296170468|ref|ZP_06852056.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894939|gb|EFG74660.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 266 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 105/288 (36%), Gaps = 24/288 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF SA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFGRAPVAVSSPQGRFAD----SAVVDGRVLRRTSVWGKHLFHH 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + A + + + + Sbjct: 57 YAGGPIVHVHLGLYGAFTEWPRAGAVLPEPVGQVRMRMVGAEYGADLRG----------- 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P N + + + K + L++Q ++AG+GN+ Sbjct: 106 PTVCEVIDEGRVSDVLAKLGPDPLRNDADPSWAWKRIAKSRRPVGALLMDQTVMAGVGNV 165 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + ++ Y ++ ++ + G + H Sbjct: 166 YRSELLFRHGIDPFRPGRDVGEDEF------YAAWTDLVALMKVGLRRGQIVVVRPEHDH 219 Query: 244 GSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG IR V GR+ F+C CQK Sbjct: 220 GAPPYRPDRPRTYVYRRAGEAC-RVCGDAIRTTVLEGRNVFWCPSCQK 266 >gi|327446321|gb|EGE92975.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] Length = 299 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 105/288 (36%), Gaps = 23/288 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRGEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EGNLSII---VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + +HLG+ G +E T P V + +T+ R P+ Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDGVTAADLR----GPQT 134 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 ++ E T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 135 CELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + ++ + + Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMG 249 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 250 RPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|282875890|ref|ZP_06284757.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] gi|281294915|gb|EFA87442.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] Length = 201 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 14/215 (6%) Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 G F++ + +H V L N K +++Y+D RRFG + + Y Sbjct: 1 MAGGFFVVNNLDEISTPNYRKHWQVIFDLDN-----KQKLVYSDIRRFGEIRNIVNFDSY 55 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 P + + KN +K +L+ +++AG GNIY CEAL+RA + Sbjct: 56 PSLLEIAPEPFEEVAFEHYLECLTMKKYKNKPIKQTILDHRVIAGAGNIYACEALFRAGI 115 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 +P + T SL + L +++VL + I GG+S+ DY H DG G Q + Sbjct: 116 TPDKITNSLTKQER------KSLFYYVREVLEEGIKYGGTSISDYRHADGKTGQMQLHLN 169 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + + C CG I V AGR++ +C CQ+ Sbjct: 170 VYKQ--KKC-KVCGHSIETKVIAGRNSHFCPNCQR 201 >gi|302519076|ref|ZP_07271418.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302427971|gb|EFK99786.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 273 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 101/290 (34%), Gaps = 30/290 (10%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE + R + + +F +A G + K+L + Sbjct: 4 PEGHTLHRLAADHDQRFGGRPVRAASPQGKFAAS---AALLDGAVLDGAEAHGKHLFLGF 60 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G + P + + + LT R G Sbjct: 61 GPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGWSDLR---------GP 106 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + LGP+P + + + + + + L++QKIVAG+GN+Y Sbjct: 107 TACALIDDDAKAAVHARLGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNVY 166 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+R + P R RSL + L +++ ++ + + G H Sbjct: 167 RAEVLFRHGIDPARPGRSLSRAEWD------ALWADLRVLMREGVRLGRIDTVRPEHTPE 220 Query: 245 SIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 221 AMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 269 >gi|255324058|ref|ZP_05365183.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] gi|255298915|gb|EET78207.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 93/288 (32%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RF G++I K+L + Sbjct: 1 MPEGHVIHRLANKFNADFRGMPLRVTSPQGRFAAEAEL---LDGERIELAETYGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G E + + + N R Sbjct: 58 FSAQDPRHILYIHLGLIGKLRFEPREE-------VGGQIRVRIDNGAEAANLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + L +G +P + L HK ++ + +++Q + AG+ Sbjct: 104 --GPQFCRLLTEEEYRAQLAKVGQDPLRADADVEALWDTVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R LSP R + + + E + + Sbjct: 162 GNIYRAETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSPEAM 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG + V GR+ F+C CQ Sbjct: 222 GREPRKDDHGGEVYVYRRAGLPCY-ICGTPVAEKVMEGRNLFWCPTCQ 268 >gi|332829519|gb|EGK02168.1| hypothetical protein HMPREF9455_01802 [Dysgonomonas gadei ATCC BAA-286] Length = 273 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 104/295 (35%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 M E+PE I R ++ + + +F P + G++I V Sbjct: 1 MIEIPESNTISRQAETILAGKRIVKVVQATSPHKFTWYNGDPLLYPDILVGREIEGVRGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +L I + ++ I + G + + +P + + I + + +Y Sbjct: 61 GAFLDILCDEDVKISIGDGTNLKYY------PSFESHPVKHQLLIEFDDKSFMAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + E Y L ++ P KK+ ++K L ++ Sbjct: 115 GAIYAYKG----EMDNFYHRNSLNSISPLADKFDRQYFDSIFSNVKKDMSVKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L++A L P RK ++ K+ + G + Sbjct: 171 IPGLGNGVLQDILFKAGLHPKRKISTISDFERGDLFHCLKVTLQSMTDK-----GGRDTE 225 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G+ G ++ + Y + PC NCG I + G + +YC CQK Sbjct: 226 KDFY---GNFGGYKCLLSKNTYKR---PC-PNCGGEIVKEAYLGGTVYYCPSCQK 273 >gi|225020056|ref|ZP_03709248.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] gi|224947191|gb|EEG28400.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] Length = 275 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 28/290 (9%) Query: 4 LPEVEIIRRNLMMVMKN-MTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PE +I R L + T T + RF + G+ ++ K+L I Sbjct: 8 MPEGHVIHR-LAQHLNREFTDTSPIVTSPQGRF---DAQARTLDGQPYLESDAYGKHLFI 63 Query: 63 EL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 E + I +HLG+ GS E + K + + + +T R Sbjct: 64 EFDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATDTIAANLR------ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 G + + + + LG +P + + + +K N ++ + L++Q + G Sbjct: 111 ---GPQWCRLITAEEKAVAVDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+R + P + + D++ + + ++ ID + + + Sbjct: 168 VGNIYRAETLFRLGIDPFS-SGKDADFDAIWADLVQLMAEGVKAGRIDTVRPEHT--PEA 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + VY + G+ C CG I V GR+ F+C CQK Sbjct: 225 MNRPPRVDDHGGEVYVYRRAGQKCY-ICGTPISEQVMEGRNLFWCPTCQK 273 >gi|296118493|ref|ZP_06837071.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295968392|gb|EFG81639.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 279 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 95/288 (32%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI- 62 +PE +I R ++ D+ + RF + G ++ K+L + Sbjct: 11 MPEGHVIHRLAHTFNQDFRGMDLEVSSPQGRFATE---AEQLDGFRLERAEAFGKHLFLL 67 Query: 63 --ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I +HLG+ G F+ E + + + ++N R Sbjct: 68 FDAPSPAHIIYIHLGLIGQFLFEDPESRR-------GQIRLHISNGEQAANLR------- 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + + L +G +P + L + + + + LL+Q + AG+ Sbjct: 114 --GPQWCRLITEEEYDAQLAKVGFDPLIADTDPEPLRVKVQRSKRTIGSLLLDQALFAGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G+IY E L+R ++ P R+ L + V + + Sbjct: 172 GSIYRTEVLFRQQILPSRRGNELTDAQFAAIWQDLVELMNYGVVAGRIDTVAPEHTPEAM 231 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D VY + G PC C + + GR F+C CQ Sbjct: 232 GRDPRKDDHGGEVYVYRREGLPCY-VCNTPVVSQILEGRKVFWCPTCQ 278 >gi|295669486|ref|XP_002795291.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] gi|226285225|gb|EEH40791.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] Length = 369 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 100/308 (32%), Gaps = 46/308 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ + P + + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDRGEEPWPSKFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 + K + D RR G + LV+ P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGADIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN + + +L I Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGNTL---------------------QESQIEQLYSAI 219 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++ G+S + F + +S GKT G+ I I GR++ Sbjct: 220 NYVCSTSVGLLGNSEEFPSNW-----LFSHRWSK-GKTNHSHKLPNGEKIVFITVGGRTS 273 Query: 282 FYCTYCQK 289 QK Sbjct: 274 AIVPAIQK 281 >gi|72382399|ref|YP_291754.1| endonuclease VIII [Prochlorococcus marinus str. NATL2A] gi|72002249|gb|AAZ58051.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Prochlorococcus marinus str. NATL2A] Length = 281 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + + + + + + + I D++ R K + Sbjct: 1 MPEGPEIRRAADKISKVLIGEEIIESNFYYERI-----KEKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + N S+ H + G + + + K + + T N + + Sbjct: 56 LIRFKNNWSMYSHNQLYGRWTVNLNTT----KVKSRRALRVVFTTNKHAVRLW------- 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +DL+ T + ++ L+ +GP+ S + + + +L+Q Sbjct: 105 SATDIDLIPTDEENEHSFLKKIGPDVLSESCSLDLIEERLTSTSFHKKKASTLMLDQAFF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GN E L+ AK+ P + K + + + I+ + A GG ++ Sbjct: 165 AGLGNYLRSEILFDAKIHPDDRPFD------LDKTKITQWAKSIKNISQLAYKTGGFTVS 218 Query: 237 RDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G + +V+ + CL NC I R R YC CQ Sbjct: 219 KSLADRNKENGEPRRSYRHAVFMRHQYECL-NCKDRIERKWYGKRKVDYCPSCQ 271 >gi|284047240|ref|YP_003397580.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] gi|283951461|gb|ADB54205.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] Length = 260 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 104/297 (35%), Gaps = 45/297 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPE + + +++ +I + ++ R+ G+++ V Sbjct: 1 MPEGDTILRAANRIRPILEGAVPDEIRMPQRRHAADRWP------QRLAGRRVRSVDPYG 54 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV---TISLTNNTNTKKYRV 114 K+L + EG+L++ HL M+G++ + + V S + + Sbjct: 55 KHLFLRFEGDLTLHSHLRMTGAWAVYPDGARWRRAPRRAWLVLRARGSEVVEFDGPVLEL 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + RF + + +ALL+Q Sbjct: 115 MTESRTRFDQQLRALGPDLLADDFDPARFLR-----------RLRADDPTRGIGDALLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +IVAGIGNI+ E W A++ P R R + +++ + ++ A A Sbjct: 164 RIVAGIGNIWKAEGCWGAQIDPWRPLRDVTDAEAV------AIVENARPRMLAAAAAPRG 217 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + D H VY + G PC CG +I Q R+T++C CQ+ Sbjct: 218 AGGDDRH-------------VYRRGGMPC-PRCGTVIASRGQGDDNRTTWWCPGCQR 260 >gi|282866719|ref|ZP_06275759.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282558418|gb|EFB63980.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 269 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 102/287 (35%), Gaps = 20/287 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + +F +A G+ + D K+L + Sbjct: 1 MPEGHTIHRLAADHRARFAGSPVRVSSPQRKF---AESAARLDGRVLTDTDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + +HLG+ G P + V + L N ++ R G Sbjct: 58 FDGPEWVHIHLGLFGKL-----GFGTTPAPPPTDTVRLRLVNASDYADLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + L++QK+VAG+GN+ Sbjct: 104 PTTCALITEDEKRAIHARLGPDPLREDEDGERAWLRISRSRVTVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 Y E L+R + P R + L ++ L L++E + L + + Sbjct: 164 YRAEVLFRHGIDPYRPGKDLTRSEWDAIWADLGALMREGVRNNRI-DTVRPEHLPEAMGR 222 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + + C C IR A R+ F+C CQ+ Sbjct: 223 PARVDDHGGEVYVYRRARQAC-HICATEIRTADLAARNLFWCPACQR 268 >gi|284042578|ref|YP_003392918.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] gi|283946799|gb|ADB49543.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] Length = 281 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 110/288 (38%), Gaps = 23/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R L + V N F A G + VSRR K+L Sbjct: 1 MPELPEVEITARLLSEGVAGARVESTLAPGINALKTFDPPLHA-LDGTTLTGVSRRGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++E + L +++HL +G + + + + L ++ R+ + Sbjct: 60 VVESDAGLVLLIHLMSAGRLQLYEK------RAGLRDRTSRILLRLDGDRELRLREFGTK 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L+ + TLGP+ + L + L L +Q+ +AGI Sbjct: 114 QAAWAKLLRAEELDAEEAVATLGPQAWPDPPPFGPLLAK----ARPLHTLLRDQRTIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G +V E LW A+LSP ++ R L + +L +L AI +L + Sbjct: 170 GRSWVDEILWEARLSPFKRGRDLSEEE------AERLRAATVAILGGAIAHYEEALALPL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+ + GEPC CG ++ + YC Q Sbjct: 224 PDKLPLPL-----RVHRRQGEPC-PRCGAELKAVHYEDYVIAYCPVEQ 265 >gi|226305585|ref|YP_002765545.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226184702|dbj|BAH32806.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 263 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T + P + + G ++ V+ R K+L Sbjct: 1 MPEGDTVWRAANDLRAALAEKVLTTCDVR-------VPRYATVDLSGHRVDSVASRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + I HL M G + I + + P H I T ++ + + Sbjct: 54 LIRVGEAS-IHTHLKMEGQWQIYRPG--ERWRRPAHQARIILATEDSVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +++E + + + +++ + + + ALL+Q+++AG+ Sbjct: 105 --GVTEILELGQEQEAVGHLG-PDLLGTDWDSSVAARNLRAADSVPIGIALLDQRVMAGL 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P T + I + I+ S Sbjct: 162 GNVYRNEICFLRGIHPKTPTHRAGN------------LDAIVDLSFRTINVNKSRRIRVT 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 D G VYG+ G+PC CG IR R+ F+C CQ Sbjct: 210 TGDTRPGR---QTWVYGRRGKPC-RRCGTRIREDTLGPDQLTERNIFFCPACQ 258 >gi|317480425|ref|ZP_07939522.1| zinc finger protein [Bacteroides sp. 4_1_36] gi|316903417|gb|EFV25274.1| zinc finger protein [Bacteroides sp. 4_1_36] Length = 277 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 112/296 (37%), Gaps = 29/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGDPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + K P + + ++ +++ +++ Sbjct: 61 GMFVNFNLSDNVIMNIGDGVSVRYYSAGD------KIPANYQLLLTFNDDS-----FLVF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA--LLNQ 174 ++ + +Y L P + + + L L Sbjct: 110 TVAMYGFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLATN 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A+++P +K L N L +++ L+D GG Sbjct: 170 QRIPGVGNGVTQDILFNARINPKQKVLLLSDNQKDV------LFNALKETLVDMTFEGGR 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 224 DTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|169835968|ref|ZP_02869156.1| formamidopyrimidine-DNA glycosylase [candidate division TM7 single-cell isolate TM7a] Length = 227 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 16/234 (6%) Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN------TKKYRV 114 +I+L N ++++HL M+G I + K ++ + L + + ++ Sbjct: 1 MIDLSTNYTLVIHLKMTGQ--IIYRGDIKFGAGHPNDSLIGELPDKSTRVSFDFEDGSKL 58 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP-ADNSFNAIYLTHQFHKKNSNLKNALLN 173 +ND R+FG++ L+ + P ++ +GPEP D+ ++ +KN+++K ALL+ Sbjct: 59 FFNDQRKFGWIKLIPSLEVKNLPFMQKVGPEPLDDDFTVEDFIHRFERRKNTSIKAALLD 118 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY E+LW AK+ P R+ + + + L E++ V+ +I GG Sbjct: 119 QTVVAGVGNIYADESLWGAKIDPRRRVKDITNDEF------KSLYNEVRYVMDLSIKKGG 172 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 S+ R+YV +G+ G + V+ + G+ C CG +I +I AGR T C C Sbjct: 173 STDRNYVDAEGNKGSYLEFARVFRREGQAC-KRCGHIIEKIKHAGRGTHICPGC 225 >gi|311743597|ref|ZP_07717403.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] gi|311312727|gb|EFQ82638.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] Length = 259 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 95/293 (32%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L V+ + L P ++ G ++ +V R K+L Sbjct: 1 MPEGDTVWRTAHHLHEVLAGRDLVTFDLR-------VPDFATSDLTGHRVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++ HL M G++ ++ V + + V+ PR Sbjct: 54 LTRIGSF-TLHTHLKMEGAWHVQPRGAGWRRPAHSARAVLETTEHQAIGYSLGVVELVPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + P + A + + ALL+Q+ +AG+ Sbjct: 113 DAEDTVVGHLGPDLLGP-----------DWDAAEAVRRLRTDPTRPVFLALLDQRNLAGL 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN YV E L+ A L+P R + L +L+ + R + Sbjct: 162 GNEYVNELLFTAGLAPTRPVSDVPD--------LPRLVA---RGRQMLDVNKARVERSFT 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY + PC CG I + R+TF+C +CQ Sbjct: 211 G----STRPGQERWVYSRERRPC-RRCGTRISQGSLGDDPVRQRNTFWCPHCQ 258 >gi|189467099|ref|ZP_03015884.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] gi|189435363|gb|EDV04348.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 109/295 (36%), Gaps = 27/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + V+ T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVLTLSKQANDVLSGKTITQVFNATKPHKFTFYSGDPLEYGKLLVGKTILSSKGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L GN+ + + G+S + K P + + ++ + + +++ Sbjct: 61 GMFVDFYLSGNVIMNIGDGVSARYY------NPGDKVPANYQLLLTFKDES-----FLVF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA--LLNQ 174 + + +Y + P +++ F L L + Sbjct: 110 TVAMYGFISAYPDAVIDNKYYTISRESISPLSDAYTEAEFEKLFAFAKKTLTAKALLATE 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A + P +K L K +L+K +++ + G Sbjct: 170 QRIPGVGNGVTQDILFNAGIHPKQKVFDLSDGQ---KGVLFKSLKDTLMAMT-----SGR 221 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G ++ S KT + CG +I + G S +YC+ CQK Sbjct: 222 GRDTQTDLYGNEGGYKTILS--SKTWKNPCPRCGSVIVKEAYLGGSVYYCSECQK 274 >gi|297160503|gb|ADI10215.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 102/292 (34%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIHRLAADHSELFGGRPVRASSPQGKF---ADGAALIDGQVLEHAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G P V + L + Y D R Sbjct: 58 FPATGWVHVHLGLFGKV-----GLGPAPAPPPTETVRLRL-------AAKEAYADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ + LGP+P S + + + +++ LL+QK+VAG+GN+ Sbjct: 106 ACALIT--DDEKQAVHDRLGPDPLRPSDDGDRAWARVSRSRTSVAALLLDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L + + ++ ++ + + H Sbjct: 164 YRAEVLFRHGVDPYRAGRDLSRAEWD------AIWADLVALMREGVRNNRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PC CG +R A R+ F+C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRHRQPC-HICGGEVRTADLANRNLFWCPNCQR 268 >gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens] Length = 259 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 107/269 (39%), Gaps = 26/269 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L T+ + D P + GKKI+ R+ K Sbjct: 1 MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK-----KYR 113 +L ++L+ GMSG+ II+ + + + T + Sbjct: 61 HLWLKLDSPPWPSFQFGMSGAVIIKGVKGPQYRSSKVGDEEEAFPTTYSKVHLVLSTGVE 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D RRF + L+E + PP+ LG + +A L K ++K LL+ Sbjct: 121 LAFTDKRRFARVRLLE--DPSKVPPISELGFDAYLELPSAEQLIEAMKTKKGSVKALLLD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AGIGN E L+ AK+ P + SL + + +L +++VL AI Sbjct: 179 QSFIAGIGNWVGDEVLYHAKIHPEQSASSLKEEE------VTRLHASVREVLEKAI---- 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 +D F ++ + + + Sbjct: 229 -------SVDADSEQFPRSWLYHHRWDKK 250 >gi|331695758|ref|YP_004331997.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] gi|326950447|gb|AEA24144.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] Length = 278 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 91/285 (31%), Gaps = 13/285 (4%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLARRHGRLFGRAPVRVSSPQGRF---EQAAALLDGAVLTRADAHGKHLFHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F V + + T+ R G Sbjct: 58 YGRDRVVHVHLGLYGTFDETELPEPGGAPPEPRGQVRMRIVGATHVADLR---------G 108 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + LGP+P + + + +S L L++QK+VAG+GN+ Sbjct: 109 PTACELITDGEVRALRARLGPDPLRRDADPDLAWERIRRSSSPLATLLMDQKVVAGVGNV 168 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R+L + ++ Sbjct: 169 YRAELLFRHGIDPQLPGRALPRGTWDAMWADLVVLMRDGVRRGRIDTVAPEHDPRRRGEP 228 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G VY + G PCL CG + A R+ F+C CQ Sbjct: 229 GRKDRHGGEVYVYRRQGMPCL-VCGTPVLHAEHAARNLFWCPTCQ 272 >gi|323356901|ref|YP_004223297.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273272|dbj|BAJ73417.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 277 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 98/293 (33%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +R+ L V + L + G++I+ K+L Sbjct: 1 MPEGDSVYRLRQRLDAATTGHRVREGELRSGSAAGTS-------LAGRRIVGYDTHGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++ HL M GS+ I A P + V + L + + Sbjct: 54 LTRFDDGTTLHTHLRMQGSWAITRAGRALPTPVREKARVRLRLDDGREVWGLDL------ 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++LV T + ++ A + + ALL+Q +AG+ Sbjct: 108 --PVVELVPTPRERDVIGHLG-PDPLREDWDAADAVRRLSSRPERAFVAALLDQTRIAGL 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++V E + + P + + + + + R Y Sbjct: 165 GNLWVNELAFLRGIHPFAPIGTTDL-------------DALAALAARCLRISATVPRMYQ 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQAG----RSTFYCTYCQ 288 G ++ V G+ G PCL CG I R AG R T++C CQ Sbjct: 212 VTTGDR-RRGSSHWVAGRAGRPCL-RCGTRILVREEVAGDPEQRRTWWCPLCQ 262 >gi|170781889|ref|YP_001710221.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156457|emb|CAQ01605.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 329 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 113/341 (33%), Gaps = 66/341 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I + + RF +A G++++ K + Sbjct: 1 MPEGHSIHRIAKQFEAHFVG---DVVQASSPQGRF---AEGAAVLDGRRLLAAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT----------------------------------- 85 +E +G++ + VHLG+ G++ Sbjct: 55 FLEFDGDVWLRVHLGLYGAWDFAGDVTTLNRMGQNGMRGDVPVDDRVDDAPVDAAAEDSL 114 Query: 86 ---SCAKPIKNPQ------HNHVTISLTNNTNTKKYRVI------YNDPRRFGFMDLVET 130 + + H+ + + RV D R + Sbjct: 115 ASIGAPRRARLRMAEQEKVHDPFSAEAWPPEPVGQVRVRLLTERAVADLRGPTACVVASP 174 Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 Q P + + T KK + + L++Q +V+GIGN+Y E L+ Sbjct: 175 DEVQQAIDKLGPDPLVDGGTRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAELLF 234 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI---DGSIG 247 RA+ +P R P+D++ L ++ K+L ++ G D + D ++ Sbjct: 235 RARQNPHTPGRD------VPEDVVRGLWRDWSKLLRKGVEVGQMMTMDGLRGKKLDAALR 288 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG + AGR ++C YCQ Sbjct: 289 NRADRHWVYHREGLPC-RVCGTNVVMEEAAGRKLYWCPYCQ 328 >gi|50954590|ref|YP_061878.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951072|gb|AAT88773.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 330 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 104/342 (30%), Gaps = 67/342 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + RF + G+ +I K + Sbjct: 1 MPEGHSVHRIARQFAATFVGHP---AAVSSPQGRF---AEDAKRIDGRTMIAAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSF---------------------------------IIEHTSC 87 +E + L + VHLG+ G++ I + Sbjct: 55 FLEFDNGLWLRVHLGIYGAWDFAGDIGVDPTIASANGRMGQTQQKGTAAQRGTIFDGDGE 114 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIY------------------NDPRRFGFMDLVE 129 + ++ + + D R +++ Sbjct: 115 NSLHSIGAPRRTRVRMSETEKAQPEIESFPPEPVGQVRVRLLTASAVADLRGPTVCAVLD 174 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 P KK + + L++Q +V+GIGN+Y E L Sbjct: 175 PQEVAAVIARLGPDPMLDSGPVAEETFVAAVRKKPTAIALLLMDQSVVSGIGNVYRAELL 234 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID---GSI 246 +RA+ +P + + ++ I+ L ++ ++ ++ G D + + ++ Sbjct: 235 FRARQNPHTPGKLVAED------IVRALWRDWVQLHRIGVETGQMMTMDDLDEEAYRRAM 288 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VY + G PC CG I V GR ++C Q Sbjct: 289 AKREDRHWVYKREGLPC-RVCGTHIVMEVFGGRKLYWCPRDQ 329 >gi|116670953|ref|YP_831886.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116611062|gb|ABK03786.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 305 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 98/316 (31%), Gaps = 40/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + + RF +A + ++ K++ Sbjct: 1 MPEGHSVHRLARQFADVFAGQRLA---VSSPQGRF---ADGAALLDARTLLGTVAHGKHM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + + L++ VHLG+ G++ + A I P+ + Sbjct: 55 FLHFDNGLALHVHLGLYGAWDFGGDATFRGASSIGAPRKVGEREVFDDGATDPAAGGGPG 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA---------------------IYL 156 + V L + G A Sbjct: 115 YTGPPAPVGAVRVRLAGAHGWADLRGATTCHAITEAEADAVLARLGPDPLRNLPGDKDGF 174 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + L L++QK++AG+GN+Y E L+R L P RSL Sbjct: 175 VAGLRARKTPLAALLMDQKVIAGVGNVYRAELLFRQGLDPWLPGRSLDAEAAGG------ 228 Query: 217 LIQEIQKVLIDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L ++ ++ D + G + R + + + VY + G C CG + Sbjct: 229 LWEDTVAMMSDGVRDGRIITTPPRYWTEPAAGLPAPGESHFVYRRHGLDC-RICGSPVAL 287 Query: 274 IVQAGRSTFYCTYCQK 289 R ++C CQ+ Sbjct: 288 TDLGARKLYWCPVCQQ 303 >gi|238063417|ref|ZP_04608126.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885228|gb|EEP74056.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 273 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 92/298 (30%), Gaps = 43/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L G + + + R K+L Sbjct: 1 MPEGDTVWNTARVLGRALGGARLTASDFRVPRLAGTD-------LAGWTVRESASRGKHL 53 Query: 61 LIELEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ L ++ HL M G++ + + + Sbjct: 54 LLRLAAPAPVGSGGVTGWTLHSHLRMDGAWRAYAPGERWTARPAHLIRAVLRAPD----- 108 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + LV T+ + + + + + A Sbjct: 109 ----AVAVGYHLHELALVPTAEEGALVGHLG-PDLLGADWDPTEAVRRLAAHPEATIGEA 163 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ +AG+GN+Y CE L+ +SP ++ GT L + Sbjct: 164 LLDQRNLAGVGNLYKCEVLFLRGVSPWTPVGAVSDLAGTVALAQRLLAANRGRWTQ---- 219 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+ + S VYG+ +PC CG IR+ R T++C CQ Sbjct: 220 ---STTGSLRRGETS--------YVYGRRAQPC-RRCGTAIRKQELGERVTYWCPICQ 265 >gi|167756382|ref|ZP_02428509.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] gi|167703790|gb|EDS18369.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] Length = 273 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 109/293 (37%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 1 MIELPEAYAIADDLEKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ I + N + G + + + T K + + I+ + + +Y Sbjct: 61 NYYVEI-VIENYRLTFRDGANIRYYQKPTKLKK-------SKLLITFADQSFINVTTSMY 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F + + ++ +T + K + L ++ Sbjct: 113 CFIGLFDQITGSNNEYYQTELTSIGPLDQEFTLNYFKTLITDETEKLSIKA--FLATKQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + GIGN + ++ AKL P R+ ++L + + + L + + L ++ G Sbjct: 171 ILGIGNGVAQDIMFNAKLFPKRRIKTLNEQD------IKNLYDALIRTLTKMVENHGR-- 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I G+ G ++ K+ + C I++ G S +YC CQK Sbjct: 223 DSEKDIYGNPGGYKTILCA--KSYKSGCPICHCEIKKEQYLGGSIYYCPNCQK 273 >gi|229489614|ref|ZP_04383477.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] gi|229323711|gb|EEN89469.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] Length = 268 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 102/293 (34%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T + P + + G ++ V+ R K+L Sbjct: 6 MPEGDTVWRAANELRAALAEKVLTTCDVR-------VPRYATVDLSGHRVDSVASRGKHL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + I HL M G + I + + P H + T ++ + + Sbjct: 59 LIRVGEAS-IHTHLKMEGQWQIYRPG--ERWRRPAHQARILLATEDSVAVGFSL------ 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +++E + + + +++ + + + ALL+Q+++AG+ Sbjct: 110 --GITEILELGQEQEAVGHLG-PDLLGTDWDSSVAARNLRAADSVPIGIALLDQRVMAGL 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P T L + I + I+ S Sbjct: 167 GNVYRNEICFLRGIHPKTPT------------HLAGNLDAIVDLSFRTINVNKSRRIRVT 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 D G VYG+ G+PC CG I R+ F+C CQ Sbjct: 215 TGDTRPGR---QTWVYGRRGKPC-RRCGTRITEDTLGPDQLTERNIFFCPACQ 263 >gi|70699884|gb|AAZ06853.1| formamidopyrimidine-DNA glycosylase [Microbacterium arborescens] Length = 336 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 110/349 (31%), Gaps = 73/349 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + V RF +A G++ I+ K + Sbjct: 1 MPEGHSVHRIARQFERNVVGRVVAA---SSPQGRF---AEGAAVLDGREAIEARAVGKQM 54 Query: 61 LIELEGNLS----------------------------IIVHLGMSGS-----FIIEHTSC 87 + EG++ + H G+ F + Sbjct: 55 FLAFEGDVWLRVHLGMYGAWDFAGEIVVDPTIASANGRMGHTNQRGTEVAPIFDSAGENS 114 Query: 88 AKPIKNPQHNHVTISLTNNTNTKK------------------------YRVIYNDPRRFG 123 I P+ + ++ T V D R Sbjct: 115 LSSIGAPRRARGRVRMSEQTTGLGDDGAAVGDEEWPPPVVGQVRLRLLTDVTCADLRGPT 174 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L P D + T +K + + L++Q +V+GIGN+ Sbjct: 175 ACQLQTPEEVQATIAKLGPDPLVDDLAEGEERFTATVRRKPTPIGLLLMDQSVVSGIGNV 234 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA+++P R P++ + +L ++ ++L ++ G D + + Sbjct: 235 YRAEMLFRARVNPHTPGRD------VPEETVRELWRDWVRLLAIGVETGQMMTMDDLDPE 288 Query: 244 ---GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + + VY + G PC CG I A R ++C CQ+ Sbjct: 289 AWRRAMAHRDDRHWVYHRAGLPC-RVCGTAIVLEEMASRKLYWCPNCQR 336 >gi|323357450|ref|YP_004223846.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273821|dbj|BAJ73966.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 258 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 99/293 (33%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + VT + P +A RG+ + +V+ R K+L Sbjct: 1 MPEGDTVYRAAAKLSAALAGKVVTRFDIR-------VPGSATADLRGETVHEVAARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G ++ HL M G + + + + P I + + + + Sbjct: 54 -LHRIGGYTLHSHLKMEGRWDVYRPG--ERWRRPAFKARAIVGVAGADAVGFDLAMVEVL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++ + LGP+ + ++ + + ALL+Q+ VAG Sbjct: 111 R----------TTDEHTVIGHLGPDLLADDWDEAEAVRRVGADTREVHVALLDQRNVAGF 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+ ++P + + + I A Sbjct: 161 GNVYANELLFVRGIAPTTPATEID-------------VPATIALGERMIRANLPRPERTF 207 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 D G F VYG+ G PC CG IR R+ ++C CQ Sbjct: 208 TGDTRPG---RRFWVYGREGAPC-RRCGTPIRATALGASATSERNVYWCPTCQ 256 >gi|160891963|ref|ZP_02072966.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] gi|156858441|gb|EDO51872.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] Length = 277 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 112/296 (37%), Gaps = 29/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGNPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + P + + ++ +++ +++ Sbjct: 61 GMFVNFNLSDNVIMNIGDGVSVRYYSAGD------EIPANYQLLLTFNDDS-----FLVF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA--LLNQ 174 ++ + +Y L P + + + L L Sbjct: 110 TVAMYGFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLATN 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A+++P +K L N L ++K L+D GG Sbjct: 170 QHIPGVGNGVTQDILFNARINPKQKVLLLSDNQKEV------LFNALKKTLVDMTSEGGR 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 224 DTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|325918780|ref|ZP_08180868.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325535007|gb|EGD06915.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA +SP+R+ + L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGISPLREAGKVSLER------YRSLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R+T +C +CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQRATVWCGHCQR 111 >gi|262183005|ref|ZP_06042426.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 271 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 97/291 (33%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L +N + + RF A + K+L Sbjct: 1 MPEGHVIHRLARTLNADFRNKPLA---VSSPQGRFATEAALVDA---SPLSLAEAFGKHL 54 Query: 61 LIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + I +HLG+ GS E ++ + + + N T R Sbjct: 55 FVHFDTDNPRHVIYIHLGLIGSLRFEPSAD-------VWGQIRLRIDNGTTAANLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + + +G +P + L + H ++ L++Q + Sbjct: 104 -----GPQFCTLITEEEYQAKVAKVGQDPLRKDADPDTLWDRVHASRRSIGAMLMDQGLF 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+R +LSP L + + + + Sbjct: 159 AGVGNIYRAEALFRQELSPFIPGNQLDRAEFDAIWSDLVDLMDYGVEHGRIDTVRPAHTP 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + VY + G PC C IR V GR+ F+C CQ Sbjct: 219 EAMGREPRKDDHGGEVYVYRRAGLPC-HVCCTEIREQVMQGRNLFWCPTCQ 268 >gi|297199678|ref|ZP_06917075.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713952|gb|EDY57986.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 269 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 98/291 (33%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + +F +A G ++ K+L + Sbjct: 1 MPEGHTIHRLAQDYAAAFQGAKPHVTSPQGKF---SDAAALLTGSELTRTEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N T R G Sbjct: 58 FRDTDWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLANTTAYVDLR---------G 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + LGP+P + + + + + L++QK++AG+GN+ Sbjct: 104 PTTCALITPAEKRSIHDRLGPDPLREDADPHTAYRRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + L + ++ +++ + + H Sbjct: 164 YRAEVLFRHRVDPYRAGKDLTPAEWD------AIWADLVELMREGVRNNRIDTVRPEHTP 217 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PC CG IR A R+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRATLPC-HICGGEIRTADLAARNLFWCPACQ 267 >gi|119962666|ref|YP_948118.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949525|gb|ABM08436.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 295 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 98/307 (31%), Gaps = 32/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + + RF + G ++D + K L Sbjct: 1 MPEGHSVHRLARQFQDVFGGRPL---DVSSPQGRF---AAGAELLTGHIMVDAAAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK---------- 110 + + L + VHLG+ G++ S + + + Sbjct: 55 FLRFDHQLFLHVHLGLYGAWSFGGDSSFTGASSIGAPRRIGERESGSAADDGEYSGPPAP 114 Query: 111 --KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL-----GPEPADNSFNAIYLTHQFHKK 163 RV + + T + + + + ++ Sbjct: 115 VGAVRVRLVSDHGWADLRGATTCAAITSAEAAAVLDRLGPDPLHNRPGDRDEFIRRLRRR 174 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + + +++Q ++AG+GNIY E L+R + P S+ +L + Sbjct: 175 KTAVALLMMDQSVLAGVGNIYRAEVLFRQAVDPWTPGSSIDVE------TAGRLWDDTVD 228 Query: 224 VLIDAIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + D + G ++ G+ +A VY + G PC CG ++ R Sbjct: 229 TMSDGVRDGRIVTTPSTLWTGGGAAAPDADAHFVYKRDGMPC-RACGTLVGMTEIGARKL 287 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 288 YWCPGCQ 294 >gi|256396410|ref|YP_003117974.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] gi|256362636|gb|ACU76133.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] Length = 277 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 95/298 (31%), Gaps = 36/298 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDI------------CLHRKNLRFDFPHHFSAATRGKKII 51 +PE +I R + + + + RF+ A Sbjct: 1 MPEGHVIHR-----LAGK-LDSVFTPELTSESPLSEVSSPQGRFEASARLVADLP---YA 51 Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L I + I VHLG+ G F + + P V + + + Sbjct: 52 GSEAHGKHLFIGFGPDRWIHVHLGLYGKFHVT-----EEPPGPVVGQVRLRMVGKSGHAD 106 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 R G + + +R LGP+P + + + + L Sbjct: 107 LR---------GASACDLYGPEERGALVRRLGPDPLRADADPDLAWRKISNSSLTVAELL 157 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 + Q +++G+GN+Y E L+RA L P K R L + + + Sbjct: 158 MEQPVLSGVGNVYRAEVLYRAGLDPYLKGRDLAREQWDGIWTDLVELMAEGARIGRIDTV 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + G+PCL CG + R+ F+C CQK Sbjct: 218 WPQHTPEAMGRPPRKDDHGGEVYVYRRNGQPCL-VCGTPVATAGVRDRNLFWCPTCQK 274 >gi|152964264|ref|YP_001360048.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151358781|gb|ABS01784.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 273 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 104/301 (34%), Gaps = 40/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + + L P + G ++ + R K+L Sbjct: 1 MPEGDTVYRLARRLDAGLSGRVLRAADLR-------VPRFATLDLSGARVRETVSRGKHL 53 Query: 61 LIELEGNL-------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L+ ++ HL M G + + + ++ + + + T+ R Sbjct: 54 LTRLDVEGSSLPGPATLHTHLRMDGQWSVLAPG-KRLPRHLEPDVRVLLRTDGPTAVALR 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + E + + L + + + + LK ALL+ Sbjct: 113 M-----PVVEVVPTAEEATVVGHLGPDLLDATTPVDERVRAAVANLRRRPERGLKAALLD 167 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+ +AG+GN++ E + P + L L++ K+L ++ G Sbjct: 168 QRNLAGLGNLWADELCYLRGHDPWTPVGQV---------PLEPLVRLAVKLLAFSVSPSG 218 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQ----AGRSTFYCTYCQ 288 + D G + V G+ G+PC CG I R R T++C +CQ Sbjct: 219 AMQVT--TGDTRPG---HQHWVSGRAGQPC-RRCGTTILVRAEVPGDPEQRRTWWCPHCQ 272 Query: 289 K 289 + Sbjct: 273 R 273 >gi|323173228|gb|EFZ58857.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] gi|332997294|gb|EGK16910.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 157 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 13/168 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPE-GWIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGK-----VLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 RFG + + L LGPEP + FN YL + KK L Sbjct: 110 RFGAWLWTK--ELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKRRLN 155 >gi|260903954|ref|ZP_05912276.1| formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 281 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 104/289 (35%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + VT + L+ P A G +I VSR K Sbjct: 1 MPELPEVDALVTFLRPRIVGEFVTRTDIGELSILKTADPP--LEALNGLEITGVSRVGKS 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ +G + +++ H + + L + ++ Sbjct: 59 LIVAFDGLELVC--RFARAGWLVWHELVPTGPVRMGKGPLALRLHLASGAG-----FDIS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + + P S +A T + +K L +Q +++G Sbjct: 112 EAGTKKNAAASLVADRSEVPAIANAGPDALSIDAAEFTATLAGSTARIKTVLEDQSLISG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP + L+ I++VL A +A Sbjct: 172 IGNAYSDEILHTAQLSPFATANGVDAP---------SLLDTIREVLGHAREALIDLPPAK 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G F V+G+TG+ C CG I + + +S YC CQ Sbjct: 223 VKAAKKRG-----FRVHGRTGKTC-PVCGSTIAEVSYSDKSLQYCPGCQ 265 >gi|172041310|ref|YP_001801024.1| hypothetical protein cur_1630 [Corynebacterium urealyticum DSM 7109] gi|171852614|emb|CAQ05590.1| hypothetical protein cu1630 [Corynebacterium urealyticum DSM 7109] Length = 300 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 96/304 (31%), Gaps = 23/304 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + + + RF + A G + K+L Sbjct: 1 MPEGHVIHRLAAQLNQLFAGHAL---RVSSPQGRF---AEEAGALTGDMLDRAEAWGKHL 54 Query: 61 L--------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + I +HLG+ G+ IE + ++P + + I + + Sbjct: 55 FLSFGNPRNPHRRADHIIHIHLGLIGTLAIEPFTGSQPRGQVRLHLHRIDAEGGEDMCTW 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQ--------YPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 R + T + P T +N+ L + Sbjct: 115 GNAVEANLRGPQWCRLITDEEMDAAVAKLGADPLRSTDPVVDPENAAKLPELDQFLCRSR 174 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++ + L++Q AG+GNIY E L+R + P + L + + Sbjct: 175 RSIGSILMDQARYAGVGNIYRAETLFRLGIHPDVRACDLAAEERESIWQDLVELMAEGEA 234 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + + VY + G+PC CG+ IR V GR+ F+C Sbjct: 235 SGRIDTVRPEHTPEAMGRAPRKDDHGGEVYVYRRAGQPCY-VCGEEIRHRVVEGRNLFWC 293 Query: 285 TYCQ 288 CQ Sbjct: 294 PGCQ 297 >gi|124026034|ref|YP_001015150.1| endonuclease VIII [Prochlorococcus marinus str. NATL1A] gi|123961102|gb|ABM75885.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL1A] Length = 281 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 112/294 (38%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE++ + V+ + + + + + + + I D++ R K + Sbjct: 1 MPEGPEIKRAADRISKVLIGEEIIESNFYYERI-----KEKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + S+ H + G + + + K + + T N + + Sbjct: 56 IIRFKNDWSMYSHNQLYGRWTVNLNTT----KVKSRRALRVVFTTNKHAVRLW------- 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 +DL+ T+ + ++ L+ +GP+ + S + + + +L+Q + Sbjct: 105 SATDIDLIPTNEENEHSFLKKIGPDILNESCSLDLIEERLTSKRFHKKKASTLMLDQTVF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GN E L+ AK+ P + K + + + I+ + A GG ++ Sbjct: 165 AGLGNYLRSEILFDAKIHPDDRPFD------LDKTRITQWAKSIKNISQLAYKTGGFTVS 218 Query: 237 RDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G + +V+ + CL NC I R R YC CQ Sbjct: 219 KSLADRNKENGEPRRSYRHAVFMRHQYECL-NCKDRIERKWYGKRKVDYCPSCQ 271 >gi|305681732|ref|ZP_07404538.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658892|gb|EFM48393.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] Length = 268 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 28/290 (9%) Query: 4 LPEVEIIRRNLMMVMKN-MTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PE +I R L + T T + RF + G+ ++ K+L I Sbjct: 1 MPEGHVIHR-LAQHLNREFTDTSPIVTSPQGRF---DAQARTLDGQPYLESDAYGKHLFI 56 Query: 63 EL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 E + I +HLG+ GS E + K + + + NT R Sbjct: 57 EFDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATNTIAANLR------ 103 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 G + + + + LG +P + + + +K N ++ + L++Q + G Sbjct: 104 ---GPQWCRLITAEEKAVAVDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+R + P + + D++ + + ++ ID + + + Sbjct: 161 VGNIYRAETLFRLGIDPFS-SGKDADFDAIWADLVQLMAEGVKAGRIDTVRPEHT--PEA 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + VY + G+ C CG I V GR+ F+C CQK Sbjct: 218 MNRPPRVDDHGGEVYVYRRAGQKCY-ICGTPINEQVMEGRNLFWCPTCQK 266 >gi|18762512|gb|AAL78080.1| Fpg [Yersinia enterocolitica] Length = 90 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 7/95 (7%) Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P R SL + L + I+ VL +I+ GG++LRD++ DG GYF Sbjct: 3 CPDRPAGSLTRAQ------AALLAKTIKAVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQ 56 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 57 VYGRAGEPC-RTCGTPIESAKHGQRSTFFCRRCQR 90 >gi|270296381|ref|ZP_06202581.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] gi|270273785|gb|EFA19647.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] Length = 277 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 112/296 (37%), Gaps = 29/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGEPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + P + + ++ +++ +++ Sbjct: 61 GMFVNFNLSDNVIMNIGDGVSVRYYSAGD------EIPANYQLLLTFNDDS-----FLVF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA--LLNQ 174 ++ + +Y L P + + + L L Sbjct: 110 TVAMYGFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLATN 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A+++P +K L N L +++ L+D GG Sbjct: 170 QRIPGVGNGVTQDILFNARINPKQKVLFLSDNQKEV------LFNALKETLVDMTFEGGR 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 224 DTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|237733045|ref|ZP_04563526.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|229383847|gb|EEO33938.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 277 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 109/293 (37%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 5 MIELPEAYAIADDLKKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 64 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ I + N + G + + + T K + + I+ + + +Y Sbjct: 65 NYYVEI-VIENYRLTFRDGANIRYYQKPTKLKK-------SKLLITFADQSFINVTTSMY 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F + + ++ +T + K + L ++ Sbjct: 117 CFIGLFDQITGSNNEYYQTELTSIGPLDQEFTLNYFKTLITDETEKLSIKA--FLATKQR 174 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + GIGN + ++ AKL P R+ ++L + + + L + + L ++ G Sbjct: 175 ILGIGNGVAQDIMFNAKLFPKRRIKTLNEQD------IKNLYDALIRTLTKMVENHGR-- 226 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I G+ G ++ K+ + C I++ G S +YC CQK Sbjct: 227 DSEKDIYGNPGGYKTILCA--KSYKSGCPICHCEIKKEQYLGGSIYYCPNCQK 277 >gi|300932652|ref|ZP_07147908.1| putative endonuclease VIII [Corynebacterium resistens DSM 45100] Length = 289 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 91/304 (29%), Gaps = 39/304 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TVT + P +A G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVTHTDIR-------VPRFATATLNGQQVQRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ + HL M G + I ++ K + + T I Sbjct: 53 FMQIGDT-IVHTHLKMEGVWAIHKAG-SRWRKPGYTARIVLRFTPQHPGGAEIEIVGHEL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + A + + L ALL+Q VAGI Sbjct: 111 GFVRLYPAGEYQRVISDLGPDILDPAWLEEGLAECVRRIMKRPERALGAALLDQSNVAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ P + L + + ++ I Sbjct: 171 GNEYRAEILFLLGWHPAIPVGEVGTAGVERALRLSRRVMWENRLEPVRIF---------- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---------------RSTFYCT 285 D G V+G+ + C CG IR+ G R ++C Sbjct: 221 TGDKRPGM---GTYVFGRANKAC-RRCGHAIRKGTLGGKFAGGDANLDVAELERIIWWCP 276 Query: 286 YCQK 289 CQ+ Sbjct: 277 SCQQ 280 >gi|325962094|ref|YP_004240000.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323468181|gb|ADX71866.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 282 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 87/298 (29%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + P + G + +V K+L Sbjct: 1 MPEGDSVWRAANQLHQALAGQKLVASDFR-------VPRFATLNLAGWTVAEVVPCGKHL 53 Query: 61 LIE----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ L+I HL M G++ + V + + ++ Sbjct: 54 LMRVVGPDGKKLTIHSHLKMEGTWQVYPPGGRWRKPGFTARCVLRTPVADAVGFSLGLVE 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + P + + ALL+Q+ Sbjct: 114 VVATADEDSIVGFLGPDLLGP-----------DWDLDEAERRVRAAPEVPVGVALLDQRN 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY CEA + + + P ++ D L + I Sbjct: 163 LAGIGNIYRCEACFLSGVHPASPVSAVPDLRTMMTDAKQLLEVNLGPGRRVTILNARGLP 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTFYCTYCQ 288 + G GY VY + +PCL CG IRR V R ++C CQ Sbjct: 223 VGRMA--GRPGY-----WVYRREHQPCLK-CGTPIRRGVLGKSNGDEERDIYFCPTCQ 272 >gi|256825591|ref|YP_003149551.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688984|gb|ACV06786.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 262 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 103/292 (35%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + + +T R +LR+ P + G+ ++V R K+L Sbjct: 1 MPEGDTVWRTARRLHLALAGRELT-----RTDLRW--PSLATVDLTGRTTLEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + + + V + T + D R Sbjct: 54 LHRIEGGLTLHSHLRMEGSWRVHPAPGPRRVPSTTRAVVASTEFVAVGTSLGMLDLADTR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + L ALL+Q+I AGI Sbjct: 114 AEDDLVGHLGPDLL------------GPDWDRDRAMAGYAAAGSRPLGEALLDQRIAAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G +Y E+L+ ++SP L + + Q + A+ + D + Sbjct: 162 GTMYAAESLFLRRVSPWTTVAELTTDQLWRVVDTAR--QALLVNCARAVQ---RTTPDTM 216 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 V+G+ PCL NCG IR R F+C CQ Sbjct: 217 RELK---------WVHGRADRPCL-NCGTPIRVDPIGAAPADRVMFHCPVCQ 258 >gi|254820684|ref|ZP_05225685.1| hypothetical protein MintA_12186 [Mycobacterium intracellulare ATCC 13950] Length = 251 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 91/289 (31%), Gaps = 38/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLVGATLTRCDVR-------VPRFATVDLTGEVVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I HL M GS+ + + P + T T + Sbjct: 54 FIRVGRAS-IHSHLKMEGSWRV--------GERPVRVDHRARIVLETGTVRAV-----GV 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +++++ + ++ A + + + ALL+Q+++AGI Sbjct: 100 DLGVLEILDRDRDGEAVAHLG-PDLLGEDWDAARAAANLMADPHRPIAEALLDQRLLAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P ++ L + Sbjct: 159 GNVYCNELCFVSGHLPTAPVGAIADPLRLVSRAREMLWLNRFRWNRC------------T 206 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+ C C I R ++C CQ+ Sbjct: 207 TGDTRSG---RQLWVYGRAGQRC-RRCATPINVDDTKERVAYWCPSCQR 251 >gi|220911527|ref|YP_002486836.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] gi|219858405|gb|ACL38747.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] Length = 276 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 96/298 (32%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + T+T P + G + +V R K+L Sbjct: 1 MPEGDSVWRAARQLHEALAGQTLTASDFR-------VPRFATLNLTGWTVAEVVPRGKHL 53 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ ++G L+I HL M G++ + + K + T Sbjct: 54 LMRVKGPGDKALTIHSHLKMEGTWQVYPPG-GRWRKPGFTARCVLRTTAADAVGFS---- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G +++V T+ + + + + A+L+Q Sbjct: 109 -----LGILEVVATANEDSIVGFLG-PDLLGPDWDLDEAERRLRARPEVPIGVAILDQSN 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY CEA + + + P + D L + I Sbjct: 163 LAGIGNIYRCEACFLSGVHPATPVSKVADLRTLMTDAKQLLEANLGPGRRVTILNARGMP 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTFYCTYCQ 288 + G GY VY + CL CG +RR + R ++C CQ Sbjct: 223 VGRMA--GRPGY-----WVYRRDQHACLK-CGTPVRRGLLGKLNGEEERDIYFCPRCQ 272 >gi|325923755|ref|ZP_08185372.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] gi|325545753|gb|EGD16990.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] Length = 111 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA LSP+R+ + + +L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGLSPLREAGKVSLDR------YRRLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ G+ C CG++++ R+T +C CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGKAC-KQCGRVLKHATIGQRATVWCGSCQR 111 >gi|324997971|ref|ZP_08119083.1| endonuclease VIII [Pseudonocardia sp. P1] Length = 271 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 102/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + RF+ +A G+ + K+L Sbjct: 1 MPEGHTLHRLAKRHRSLFVRRPVRVSSPQGRFEGS---AALLDGQVMTGAEAHGKHLFHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F +P+ + + L ++ Y D R Sbjct: 58 YGRDRVVHVHLGLYGTFTESELPAPEPV-----GQLRMRLVGESH-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ ++ LG +P + + + + S L L++Q ++AG+GN+ Sbjct: 106 ACELITSAEARAVR--ARLGADPLRRDADPDRVWERVSRSRSPLATLLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI- 242 Y E L+R L P R L + L+ ++ + D Sbjct: 164 YRAELLFRHGLDPQLPGRGLDRATWDAMWP--DLVALMRDGVRVGRIDTVRPEHDPRRRG 221 Query: 243 -DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G VY + G PCL CG +R A R+ F+C CQ Sbjct: 222 EPGRKDRHGGEVYVYRRAGLPCL-VCGTEVRHSEHAARNLFWCPTCQ 267 >gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] Length = 264 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EVE R+ ++ +T + LH ++ R +A +G RAK Sbjct: 1 MPELAEVEYYRKEWDAGLR-KKITAVELHAGKRIFRGVDTKRLAATLKGAAYTGSEARAK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + G + + VHLGMSG +E AK + +H+H+ + ++++D Sbjct: 60 LMCFRFSGGVWLGVHLGMSGELRVE----AKDFEPGRHDHLVLR------QSARSLVFSD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG + E + ++ + + + +K ALL Q Sbjct: 110 PRQFGRVHFHEGRAEPEW-WAKLPPAVTSPEFTLERMSAFLKRRARLAVKAALLVQTAFP 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+A++ P L + + + ++ +++ ++D G D Sbjct: 169 GVGNWMADEILWQARIDPRALCGKLSRKQ------IAAIWEKAREICQVSLDTIGKDYSD 222 Query: 239 YVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + ++ + T + G ++ GR+T +C CQ+ Sbjct: 223 P----------PEDWLIHQRWTNKGLCPRDGLQLKTATIGGRTTRWCARCQR 264 >gi|240173489|ref|ZP_04752147.1| endonuclease VIII Nei [Mycobacterium kansasii ATCC 12478] Length = 254 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 90/291 (30%), Gaps = 41/291 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G + +V R K+L Sbjct: 1 MPEGDTVWHTAVVLRQQLAGRTLTRCDIR-------VPRFAAVDLSGHMVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G I HL M GS+ + S + + ++ +D Sbjct: 54 FIRVGGVS-IHSHLKMDGSWRVAEHSVRVDHRARIVLEADNIRAVGVDLGVLELLDHDND 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L ++ A+ + + + ALL+Q+++AGI Sbjct: 113 GAVVAHLGP--------------DLLGEDWDAAVAAANLAADPDRPIAEALLDQRVLAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P ++ L + Sbjct: 159 GNVYCNELCFVSGHLPTAPVSAIADPQRLATRARTMLWANRFRWSRC------------T 206 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRSTFYCTYCQ 288 D G VYG+ GEPC CG I + GR F+C CQ Sbjct: 207 TGDTRAGR---RLWVYGRAGEPC-RRCGTCIECLHAGAGAGRVQFWCPTCQ 253 >gi|134097938|ref|YP_001103599.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133910561|emb|CAM00674.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLAQLHQKRYGGAAVRVGSPQGRFAAS---AALLDGSVLRRAEAHGKHLFHF 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F ++ + V + + +T+ R Sbjct: 58 HGPDRVVHVHLGLYGTFT-----ESELPMDEPRGQVRMRIVGDTHGTDLR-------GPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P + + + +++ LL+QK++AG GN+ Sbjct: 106 ACELLTDAEVEA--LRDRLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R L + + ++ +++ + AG H Sbjct: 164 YRAEVLFRHGIPPRTPGRDLGRERWD------LVWSDLVELMAAGVRAGRIDTVRPEHEP 217 Query: 244 GSIGY--FQNAF----SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G Q+ VY + G+PCL CG + GR ++C CQ Sbjct: 218 EATGRAPRQDRHGGEVYVYRRAGQPCL-VCGTEVATADLVGRKLYWCPSCQ 267 >gi|170780851|ref|YP_001709183.1| DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169155419|emb|CAQ00526.1| DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 267 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 98/298 (32%), Gaps = 42/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T P + + G+++ +V K++ Sbjct: 1 MPEGDTVWRTATHLHEAIGGQVLTRSDFR-------VPKYATLDLAGQEVDEVVSVGKHI 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G+L+I HL M GS+ I A + V + T V+ PR Sbjct: 54 -LHRVGDLTIHSHLKMEGSWHIYQHGTAWRRPAFEARVVLETAERVTVGFSLGVLEVIPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + P + + + + + ALL+Q+ AGI Sbjct: 113 DQEHTVVGHLGPDILGP--------DWGDEAAEEIVRRIAAQPDRAIGLALLDQRNAAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P R R + L + + D I+ ++ D Sbjct: 165 GNVYRAELCFLRGVLPTRPVR-----EVPDLPAMIALARRTMRANRDRIER--TTTGDLR 217 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----------RSTFYCTYCQ 288 VYG+ G+ CL CG I + R T++C CQ Sbjct: 218 RGRTD--------WVYGRKGKACL-RCGTRILQGQLGDPVRPGMGAQDRVTYWCPRCQ 266 >gi|332664166|ref|YP_004446954.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] gi|332332980|gb|AEE50081.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] Length = 258 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 31/284 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV +R + + +H +R F+ G+ RR KY Sbjct: 1 MPELPEVNTFQRYFDESALQQRIARVDVHDDKIIRNMDGASFAERLHGRTFTGSYRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +L+ +++H GM+G K P+H N +++ ++DP Sbjct: 61 LFAQLDNGHHVLLHFGMTGDIKYYEDPIDK----PKHERFAFVFDNG-----FQLGFDDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F + +E Y + K LK LL Q+ +AG Sbjct: 112 RKFARILYLEDLQAYIDSLPLGEDAL----RISEADFLQLISNKKGQLKAFLLQQQNLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E ++ ++ P + SL + L +QK+L A++ R Y Sbjct: 168 VGNLYADELCYQTRIHPAARIESLSLEDK------KLLFTTLQKILNYAVER-----RAY 216 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +Q + V G + ++R+ AGR+T++ Sbjct: 217 YKDYPEDWLWQ--WRV---EGFV-PPDGKGVVRKGTIAGRTTYF 254 >gi|311894827|dbj|BAJ27235.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 268 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 31/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + RF +A G+ + + K+L + Sbjct: 1 MPEGHVIHRLAGEHDELFGGRPVRASSPQGRF---AEGAALIDGRVLDEAQAHGKHLFL- 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G++ +P+ V + + +T Y D R Sbjct: 57 GFGEHWLHVHLGLYGTYAFGAGEPPEPV-----GQVRLRMVGDTG-------YADLRGPT 104 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + K P ++ +A + + + S + LL+QK++AG+GN+ Sbjct: 105 ACELLTPAEKAAVHARLGPDPLRPGDAGDAAWW--RISRSGSTIAALLLDQKVLAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R R+L + + ++ ++ D + AG H Sbjct: 163 YRAEVLFRLGISPHRPGRALSRPEWD------AIWADLAALMRDGVAAGRIDTVRPEHTP 216 Query: 244 GSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY ++ PCL CG +R A R+ F+C CQ+ Sbjct: 217 EAMGRPPRVDDHGGEVYVYRRSDRPCL-VCGTPVRTEELAARNLFWCPRCQR 267 >gi|296138322|ref|YP_003645565.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296026456|gb|ADG77226.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] Length = 261 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 96/293 (32%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V+ +T L P + + G+ + DVS R K+L Sbjct: 1 MPEGDTLHNLAARLRPVLAGRVLTGCDLR-------VPRYATVDLTGRTVDDVSARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L++ HL M G + + + + P H + + + + + + Sbjct: 54 LI-AAGDLTLHSHLKMEGQWHVYRPG--ERWRRPGHTARAVLAVDGAQVVGFSLGFLEVL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + + ALL+Q+ +AGI Sbjct: 111 R---------TAAVDDALAHLGPDPLGPQWDPERAAENLAATPARPVGLALLDQRNLAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P + + G D L + + + LR + Sbjct: 162 GNVYRNELCFVRGVHPAMEVAACGDLRGWVDDAARLLRANAGRSVRVTTGVDRNGLRAF- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 VY + PCL CG I R+ ++C CQ Sbjct: 221 --------------VYDRARRPCL-RCGTAISAGSLGADGEAERTIWWCPRCQ 258 >gi|320096121|ref|ZP_08027719.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976942|gb|EFW08687.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] Length = 345 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 102/355 (28%), Gaps = 76/355 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + T + RF +A G + V K++ Sbjct: 1 MPEGDAIRRLAGTLDELFVGGT---VSASSPQGRFASS---AARLDGWVVQRVRVHGKHM 54 Query: 61 LI---------------------------------ELEGNLSIIVHLGMSGSFIIEHTSC 87 I E + + +HLG+ G + Sbjct: 55 FIGFVPPVPGRSYEAGVALLEGAAAGSGEPVLGEGEPWPDQWVHIHLGLYGWWRFNGDET 114 Query: 88 ------------AKPIKNPQHNHVTISLTNNTNTKKYRVI-------------------- 115 K + H + + Sbjct: 115 VVDEGHGVAHRIPNVPKGQWNGHSETRWGDGFGEARAGEWEPPEPVGAVRLRLFNDHAVA 174 Query: 116 -YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 P R + E + L ++ A H K + +++Q Sbjct: 175 DLVGPNRCELISDQERAAAEARLGPDPLDAGARADAEAAERFARVAHSKRRAIGEIVMDQ 234 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY +AL+ A +SP RK ++ + LI ++ + A Sbjct: 235 SIIAGVGNIYRADALFLAGISPHRKGANVSLKRLRGLWV---LICDLMNRGLAAGRLDTM 291 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY +TG PCL CG IR + R F+C CQK Sbjct: 292 DPDEAPDPPIEGDEEASRWYVYHRTGRPCL-RCGTPIREALMQNRRLFWCPGCQK 345 >gi|319947983|ref|ZP_08022160.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] gi|319438329|gb|EFV93272.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] Length = 278 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 97/285 (34%), Gaps = 13/285 (4%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF G+ + K+L Sbjct: 1 MPEGHTLHRLARLHTEYFAGGPVRVSSPQGRFADH----VVVDGRHFDRATAVGKHLFHH 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG L++ VHLG+ G F + P + V P R Sbjct: 57 YEGGLAVHVHLGLYGFFDTHLVPEGQDPPAPVGQVRMRVGAIADGAPAHWVDLRGPTRCE 116 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + E LGP+P D + + + L++QK++AG+GN+ Sbjct: 117 VIAEAEVGAVRD-----RLGPDPLDPDAEPERAWARIARSARPIGALLMDQKVLAGVGNV 171 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R + L + L+ ++ + D+ + Sbjct: 172 YRAEVLFRHGIDPFRPGKDLDRAQFDAVWD--DLVALMEIGVRTGAIHTIRPEHDHGDVP 229 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + VY + G C CG +R+ R+ ++C CQ Sbjct: 230 RR-GADRPRNYVYQRDGWEC-RVCGDQVRQQAMEARTLYWCPTCQ 272 >gi|149186671|ref|ZP_01864982.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] gi|148829579|gb|EDL48019.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] Length = 260 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 104/290 (35%), Gaps = 31/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS-AATRGKKIIDVSRRAKY 59 MPELPE E R L + T+ + L + P A G++ + R K Sbjct: 1 MPELPENEAQRLTLERECLHRTIEAVELGEDVTYIELPGDNERARLVGRQFTETRRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + VHLGM+G + P P H + I + R+ + P Sbjct: 61 IFAGSKTGPWMTVHLGMTGKLV----PFDAPDDPPDHTKLLIRFEGDR-----RLAFQCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ G + +++ Y F S +K+AL+ Q +AG Sbjct: 112 RKLGHVRVIDDPASYLEDEGLGPDALEVS----CEQFVQTFGSTRSAIKSALMKQDKMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN++ E L++ + P + +L ++ + + I + + + + + Sbjct: 168 IGNLWSDETLFQTGIHPEARANALGEDVLSDIHAAMRRILKGVVRVEASYEDLPEA---- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + K+G C CG I GR+ ++C QK Sbjct: 224 ------------WLIRHRKSGAEC-RRCGGTIVSTKVGGRTAYFCDKHQK 260 >gi|310831293|ref|YP_003969936.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] gi|309386477|gb|ADO67337.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] Length = 279 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 103/298 (34%), Gaps = 28/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPE PEV L KN + I + P KI + + Sbjct: 1 MPEGPEVRRTVDYLNKF-KNKILLKITFNSGRYVKHGPFKNFNLIEKDLP-LKITKIDCK 58 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K++ E N + LGMSG++ K+ +HN+++ + K + + Sbjct: 59 GKFIYFIFENNQVLFNTLGMSGNW---------QTKDSKHNNISFYFKD----IKTTLYF 105 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND R FG + + + + ++ + ALL+QK+ Sbjct: 106 NDYRNFGTFMYQSIEQLNKKLNELGPDILIDTDKLSEFKKKLDKKRNDTKIAVALLDQKV 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G GN E L+ K+SP R+ ++L I I I Sbjct: 166 VSGCGNYLRAEVLYHCKISPFREIKNLTDIEIKYIWTTLIKIGWIFYDYEKGIKNKIFLK 225 Query: 237 RD-----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D YV D Y+ + F +Y + +P G ++ + R+ Y QK Sbjct: 226 NDKLVKIYVTPDYQDYYYYHNFIIYFQEKDP----QGNIVVKEKLGPRTIHYVPKIQK 279 >gi|288922642|ref|ZP_06416818.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] gi|288346000|gb|EFC80353.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] Length = 317 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 108/340 (31%), Gaps = 85/340 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L ++ + P +A RG+++++V R K+L Sbjct: 1 MPEGDTVWLTARRLDAALRGQPLLRSDFR-------VPSLATADLRGREVLEVCARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++G L++ HL M GS+ + V + Sbjct: 54 LLRVDGGLTLHTHLRMEGSWHLYRPGSRWAGGPAWQIRVVLVTGEQ---------VAVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R +DL+ T+ + + + + + + ALL+Q+++AG+ Sbjct: 105 RLPVVDLLPTASEDRVVGHLG-PDVLGADWDLDRAVANLLADPAREIGVALLDQRLLAGL 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EA + A +SP ++++ ++ A + R Sbjct: 164 GNIWRTEACFLAGVSPWTPVGE---------------VRDLPGLVRRAQAMVRAGARGGH 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR---------------------------- 272 + VYG+ G PC CG ++R Sbjct: 209 QVTTGSARPGEQHWVYGRAGRPC-RRCGTLVRRLDRRVSTQSSSERGSPGRSRGPGERGP 267 Query: 273 ---------------------RIVQAG---RSTFYCTYCQ 288 R+ G R T +C CQ Sbjct: 268 RLDVRRDQGRHADGAGGSADVRVDVGGGNDRVTAWCPTCQ 307 >gi|326800630|ref|YP_004318449.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] gi|326551394|gb|ADZ79779.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] Length = 258 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 107/283 (37%), Gaps = 33/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ RNL ++K + I +H A + +++ V R K L Sbjct: 1 MPELPDLEVFSRNLTRILKGKKLERIHVHEHKKVSVPEKELKEALKKRELKKVYRLGKQL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + N + +HL + G + + K + + + Sbjct: 61 YFDFGKNALLSLHLMLHGKLVYTNEENPKYA-------------------LLSLKFEKAQ 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 D + + P RT + + +A L + +K L++Q I+ GI Sbjct: 102 TLFITDFQKMAHIQLNP-KRTASVDALSDDLHAERLYMILQNSKATIKTLLMDQHIIGGI 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AK++P PK+ + +L++ I++VL+ A Sbjct: 161 GNAYADEILWEAKIAPQSIANK------IPKEKVSELVESIKEVLLQAEKMILK-----E 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G IR GR+T++ Sbjct: 210 HPDIISGEIRDFMKVH-RVKAKEDPQ-GNPIRTEKIGGRTTYF 250 >gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum JL354] Length = 260 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 106/290 (36%), Gaps = 33/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA-ATRGKKIIDVSRRAKY 59 MPELPE E R + + T+ + P G + R K Sbjct: 1 MPELPEAEANRLRVERDCLHRTIEAAEPGDDTSYIELPGDNERGRLVGHQFTRTHRHGKL 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + E I VHLGMSGS + P + I R+ + P Sbjct: 61 IFAGSESGPWICVHLGMSGSLR----PFDEADGPPDYAKFLIRFEGER-----RLAFRCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ G++ +V++ + +G P +K+AL+ QK +AG Sbjct: 112 RKLGWVRVVDSPEAE----IERIGFGPDALEIGRDAFAEVIGDSRGAIKSALIEQKKLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E L+R + P RK L + + +I + D + A + DY Sbjct: 168 VGNLWSDEILYRTAIDPQRKGTDLSDSQ----------LGDIYDAMRDILHAVVDTEADY 217 Query: 240 VHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + ++ + G C CG I R GRS F+CT Q Sbjct: 218 SKL-------PDDWLIHTRDEGAEC-PRCGGEIVRTKVGGRSAFHCTRHQ 259 >gi|229821095|ref|YP_002882621.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229567008|gb|ACQ80859.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 307 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 101/319 (31%), Gaps = 47/319 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI- 62 +PE I R T + + RF + G++++ K L + Sbjct: 1 MPEGHSIHRLARAFADGFTGQVVRVSSPQGRF---ERGAELLDGRRLVATDAWGKQLFLG 57 Query: 63 -----------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI------SLTN 105 L + VHLGM G++ + V I + Sbjct: 58 FAPAEAPEDAGADPATLWLRVHLGMYGAWTFAGDAQFTGPHAIGAPRVRIAEEETAVADD 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR---------------TLGPEPADNS 150 + PR +V LGP+P Sbjct: 118 GEPSPAGEWRVPPPRGAVRARIVGDHGVADLTGPMACEVLDGAAAAREQARLGPDPLRPD 177 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + S + L +Q ++AGIGNI+ E L+R+++ P R + Sbjct: 178 ADREVYVRAVRSSPSPVGVLLTDQTVIAGIGNIFRAELLFRSRIYPRRPGARVSA----- 232 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 L ++ E +++ A D+G D + + VY + G+ CL CG Sbjct: 233 -VKLRRVWDEAVELMSAAADSGRIVTTDAADRTAA----DERWYVYHRDGQDCL-RCGWT 286 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R A R ++C CQ+ Sbjct: 287 VRAYELATRRVYWCPNCQR 305 >gi|255622364|ref|XP_002540275.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223497337|gb|EEF22108.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 223 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 53/114 (46%), Positives = 78/114 (68%), Gaps = 8/114 (7%) Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q++VAG+GNIYVCEAL+R+ + P +++ + L KL+ I++VL ++I Sbjct: 1 MLLDQQVVAGLGNIYVCEALFRSAIRPDKESGRVT------LPALKKLVPAIREVLSESI 54 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 AGGS++RDY G +GYF ++ VYG+ G+PCL CG +RR VQ GRSTF+ Sbjct: 55 AAGGSTIRDYAQPSGELGYFATSWQVYGREGQPCL--CGGTVRRFVQGGRSTFW 106 >gi|326773635|ref|ZP_08232918.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326636865|gb|EGE37768.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 358 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 110/359 (30%), Gaps = 79/359 (22%) Query: 1 MPELPEVEIIRRNLMMV------------------------------MKNMTVTDICLHR 30 MPELPEVE++R L + T+T + R Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAA-VRR 59 Query: 31 KNLRFDFPHHFSAA-----TRGKKIID-------------VSRRAKYLL----------- 61 + A G+ ++ R A +L Sbjct: 60 GKFLWLPLDDGRALSAHLGMSGQLLVRGTTAATAPDAAPESHRAAAFLADPDTLPGGRPA 119 Query: 62 --------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT---NTK 110 + + HL + + + L + Sbjct: 120 DLSATEQPRYVRDISTSAHHLRVRLHLSTGLGGDNGADGDDGAGAAVLDLVDQRMLGGLH 179 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + G M L + +PA + + +K Sbjct: 180 VVDLTPTADGAPGGMGDPRPLLPADATHIARDLLDPALELTGPTGVVARVRASRRAIKTQ 239 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY E LW A + +R G ++ ++++ +V+ A++ Sbjct: 240 LLDQGLVSGIGNIYADEGLWEAGVHGLRPGT------GLGPRVVARILESTAEVMRRALE 293 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV ++G+ G+F YG+ G C C + R GRS YC CQ Sbjct: 294 VGGTSFDALYVDVEGAAGFFARELGAYGRQGLEC-RRCKATMVRETLGGRSHTYCPRCQ 351 >gi|284989429|ref|YP_003407983.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] gi|284062674|gb|ADB73612.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] Length = 269 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 103/288 (35%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+ + + + RF +A + + +V+ K+L Sbjct: 1 MPEGHTLHRLARDQSLAFAGRP---VHVTSPQGRF---AAGAALLDDRVLDEVTAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G + VHLG+ GS+ T P + + Sbjct: 55 FA-CFGADILHVHLGLYGSYT-AGTGTPPPPRGALRMRWQGEGPDGLGVW--------TD 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + L LGP+P + + + + L++Q ++AG+ Sbjct: 105 LRGATACEVLAAPEVDRILDRLGPDPLRPRSDGAVAHRRIAGSRTAIGALLMDQSVLAGV 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+R +SP R R + L+ ++ + ++ ++ Sbjct: 165 GNVYRAEILFRHGVSPFRPGRDVDAGTWAAMW--ADLVVLMRAGVRMG--RIVTTRPEHR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++A VY +TG PC C ++ V GR+ ++C CQ Sbjct: 221 TRRGGAVRREDAHYVYRRTGLPC-RVCATPVQTQVMVGRNLYWCPVCQ 267 >gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] Length = 1230 Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 104/301 (34%), Gaps = 35/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ I L + T+ + ++ + F A GKKI+D ++ Sbjct: 1 MPEIAEISRIVHYLKRYVVGKTIGAVKTQEDDIIYGKVGTSASAFQKAMTGKKILDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF--------IIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + ++ ++H GMSG + P++ + + + Sbjct: 61 GKYFWLVMDSQPHALMHFGMSGWMKFSNDDSAYYRPAKAEEEEWPPRYWKFVLEMKED-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K V + DPRR + LV+ + + + + L Sbjct: 119 -PKIEVAFVDPRRLARIRLVDAKAED-------MRNTTPLKENGPDPVLDKDVLTVEWLG 170 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L ++GIGN E +++AKL P + + + + +L + V A Sbjct: 171 KKLRKTSNISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQ------IKQLHDAMMYVCDTA 224 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + S D D + Y GK L N GQ I + GR++ Q Sbjct: 225 VKHLAES--DKFPADWLMKYRWGK----GKKDANKLPN-GQTISFLKVGGRTSAIVASVQ 277 Query: 289 K 289 K Sbjct: 278 K 278 >gi|302551419|ref|ZP_07303761.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302469037|gb|EFL32130.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 273 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 99/291 (34%), Gaps = 30/291 (10%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R T +F G ++ K+L + Sbjct: 6 PEGHTIHRLAQDYAAAFLHTAPRTSSPQGKFAPAATL---LSGAELTRTEAHGKHLFLGF 62 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G P + V + L N+T R G Sbjct: 63 RDTDWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLANDTAYVDLR---------GP 108 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + LGP+P + + + + + + L++QK++AG+GN+Y Sbjct: 109 TTCALITPPEKQAIHDRLGPDPLRDDADPDIAYRRIARSRTTIAALLMDQKVIAGVGNVY 168 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+R ++ P R R + + L ++ +++ + + H Sbjct: 169 RAEVLFRHRIDPYRAGRDVTPAEW------HALWTDLVELMHEGVRNNRIDTVRPEHTPE 222 Query: 245 SIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG IR A R+ F+C CQ+ Sbjct: 223 AMGRPPRVDDHGGEVYVYRRADLPC-HICGGEIRTADLAARNLFWCPACQR 272 >gi|315604606|ref|ZP_07879669.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313618|gb|EFU61672.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 345 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 97/355 (27%), Gaps = 76/355 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + T + RF G I V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGT---VSASSPQGRFASSASL---LDGWVIQRVRVHGKHM 54 Query: 61 LI---------------------------------ELEGNLSIIVHLGMSGSFIIEHTSC 87 I N + +HLG+ G + Sbjct: 55 FIGFVAPQPGRTYEAGVELLEGAAAGSGEPILGEDAPWPNHWVHIHLGLYGWWRFNGDET 114 Query: 88 ------------AKPIKNPQHNHVTISLTNNTNTKKYRVI-------------------- 115 + H K Sbjct: 115 VVDEGHGVAHRIPNVAPGQWNGHSETRWGEGFGEAKAGEWQPPEPVGAVRLRLANDHAVA 174 Query: 116 -YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 P R + E L ++ A H K ++ +++Q Sbjct: 175 DLVGPNRCELISDEERRAAEAKLGPDPLDAGARSDAQAAERFAQVAHAKRRSIGEIVMDQ 234 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY +AL+ A +SP RK ++ + LI ++ + A Sbjct: 235 SIIAGVGNIYRADALFLAGISPYRKGANVSLKRLRDLWV---LICDLMNRGLAAGRLDTM 291 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY +TG CL CG IR + R F+C CQ+ Sbjct: 292 DPDEAPNPPIEGDEEASRWYVYHRTGRACL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|164428247|ref|XP_958637.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] gi|157072070|gb|EAA29401.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] Length = 415 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 107/314 (34%), Gaps = 47/314 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDF---PHHFSAATRGKKIIDVSRR 56 MPE+ E+ L + + + N+ +A GKK++ + Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKMVSAGTQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH------------TSCAKPIKNPQHNHVTISLT 104 KY +EL +++H GM+G I+ P++ I Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIETE 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQF 160 + + + DPRRFG + +V+ K P + F YL + Sbjct: 121 DGD-----EMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKM 175 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K LL+Q +++GIGN E L+ AKL P + +L + Sbjct: 176 KSRRVPIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEM------KQLYES 229 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-----PCLSNCGQMIRRIV 275 I+ V A+ G F + + + G+ + G + + Sbjct: 230 IRYVCQTAV-----------DKLGDSDQFPDDWLFNYRWGKGSKNAHSHTPNGDKLAFLT 278 Query: 276 QAGRSTFYCTYCQK 289 GR++ Y QK Sbjct: 279 VGGRTSCYAPARQK 292 >gi|258651061|ref|YP_003200217.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Nakamurella multipartita DSM 44233] gi|258554286|gb|ACV77228.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nakamurella multipartita DSM 44233] Length = 312 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 101/310 (32%), Gaps = 56/310 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + + L +L A G+ + +V+ K++ Sbjct: 5 MPEGDTVLRTARRLHQALAGRELVRAELRWPSL-------GEADLAGRTVTEVAAYGKHI 57 Query: 61 LIELEG----------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 L + L++ HL M G + + H A+P +P V L Sbjct: 58 LTRIAAADPAAPGPRRPTVPAVPLTLRSHLRMEGRWYV-HARDAEPWPSPGRASVRAVL- 115 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 G +DLV T + AD + Sbjct: 116 ------GGAQWTAVGTWLGLLDLVPTEGGERELIGHLGPDIMADGFDPQVAADRLLVVPE 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + LL+Q VAGIG +Y+ EAL+ K+SP + L +++ Sbjct: 170 REVGAVLLDQTTVAGIGTMYMAEALFVQKVSPWTPVAEVDVP--------ALLATARRQL 221 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQA----G 278 L A A S+ G + V+G++G PC CG +R Sbjct: 222 LRGAAQAVPSTT----------GNPRRGMQTFVHGRSGRPCQ-RCGGTVRVAEIGPVDKR 270 Query: 279 RSTFYCTYCQ 288 R FYC CQ Sbjct: 271 RPAFYCPACQ 280 >gi|148273833|ref|YP_001223394.1| putative endonuclease VIII/DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831763|emb|CAN02732.1| putative endonuclease VIII/DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 267 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 96/298 (32%), Gaps = 42/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T P + G+++ +V K++ Sbjct: 1 MPEGDTVWRTAAHLHEAIGGQVLTRSDFR-------VPKFATLDLAGQEVDEVVSVGKHI 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G+L+I HL M GS+ I + V + T V+ PR Sbjct: 54 -LHRIGDLTIHSHLKMEGSWHIYQHGTPWRRPAFEARVVLETAERVTVGFALGVLEVIPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + P E + + + ALL+Q+ AGI Sbjct: 113 DQEHTVVGHLGPDILGPDWGHAAAEEI--------VRRISAQPERAIGLALLDQRNAAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P R + L + + D I+ ++ D Sbjct: 165 GNVYRAELCFLRGVLPTRPV-----AEVPDLPAMVALARRTMRANRDRIER--TTTGDLR 217 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ----------AGRSTFYCTYCQ 288 VYG+ G+PCL CG I++ R T++C CQ Sbjct: 218 RGRTD--------WVYGRKGKPCL-RCGTRIQQGQLCDPVRPGMGAQDRVTYWCPRCQ 266 >gi|302529039|ref|ZP_07281381.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302437934|gb|EFL09750.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 269 Score = 99.7 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 109/291 (37%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGGPVAVSSPQGRFAAEAG---KLDGQVLVSAEAYGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ VHLG+ G+F A + V + L T+ + D R Sbjct: 58 YGPLGTVHVHLGLYGTF-----GEAPLPETAPVGQVRMRLVGRTH-------WTDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ + LGP+P + + + + L++Q ++AG+GN+ Sbjct: 106 RCELLDPAQVDAIK--ARLGPDPLRRDAKPDRAWERISRSRTTIAALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP+ RSL + + + ++ ++ + G H+ Sbjct: 164 YRAEVLFRHGISPMVPGRSLDRA------LWDAMWADLVTLMRAGVRVGRIDTVAPEHLP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + G PCL CG + + A R+ ++C CQ Sbjct: 218 AAMGRAPREDRHGGEVYVYRRAGMPCL-ICGTPVAQKELAARNLYWCPACQ 267 >gi|284992312|ref|YP_003410866.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065557|gb|ADB76495.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] Length = 284 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 37/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + + + T L R LR P + G+ + V R K++ Sbjct: 1 MPEGDTVWLAAKRMDTALGGAT-----LRRGELR--VPQLAATDLAGRTVSAVVPRGKHM 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H M GS+ I + P + I T+ YR+ Sbjct: 54 LTRFTDGWTLRTHYRMDGSWHIYRHGT-RWRGGPAFSIRAILATDEWECVGYRLHDVAMV 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + + L + + A+L+Q+ + G Sbjct: 113 R---------TEHEDQLVGHLGPDVLGPDWDLEEALRRLRAHPDEQIGVAILDQRNLCGP 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+ + P + + + ++ + S+ D Sbjct: 164 GNLYKVEGLFVCGVHPWMRVADVEDLPELVERTRSLMLANRDR-------PEQSTTGDLR 216 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ PC C I R Q R T++C CQ Sbjct: 217 RG--------RDHWVYGRKDRPCY-RCSTPILRGDQGPDLQERITYWCPRCQ 259 >gi|323359501|ref|YP_004225897.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323275872|dbj|BAJ76017.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 274 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 109/291 (37%), Gaps = 27/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PEVE + L + TV ++ L + G+++ +R K+L Sbjct: 1 MPEAPEVEALTLFLRERLGGHTVREVDLLEGRALKTRARPLTE-LIGRRVTGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++LEG I + + + +P + L N + D Sbjct: 60 DLDLEGVHLGIG--FGRAGWATWRDTGEADVDSPAPEIARVVLDNG------ILGITDAG 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L P + LGP+ D ++ L + LK L Q+ +AGI Sbjct: 112 EWLSVQLHVVDAPQDVPAVAKLGPDAVDPGYSREMLAEALGGRRKQLKALLQEQETLAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A+LSP SL +++ + +L + L A+ R V Sbjct: 172 GNAYSDEILYAARLSPTAHASSLSEDD------VTRLHLALHDTLTAAVI-----ARRGV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI---VQAGRSTFYCTYCQ 288 I + V+G+ GEPC G +I I AG +C CQ Sbjct: 221 PIAEQKAAKVASMRVHGRAGEPCPEGDG-VIEDIPGTKGAG---QWCPSCQ 267 >gi|146545|gb|AAA03747.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] gi|146558|gb|AAA24045.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 89 Score = 99.7 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 7/96 (7%) Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P R SL L + I+ VL+ +I+ GG++L+D++ DG GYF Sbjct: 1 IHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQEL 54 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ GEPC CG I A R+TFYC CQK Sbjct: 55 QVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 89 >gi|271967519|ref|YP_003341715.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270510694|gb|ACZ88972.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 269 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 109/294 (37%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + RF + G+ + + K+L Sbjct: 1 MPEGHTIHRLAAQYRQAFGGRV---VRAESPQGRF---AAGAHQIDGRVLRETDAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + + VHLG+ G P V + L+N Y D R Sbjct: 55 LLGFDDDRWLHVHLGIYGKSAFGPAPAPAPT-----GAVRLRLSNAEE-------YADLR 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L++ + K LGP+P + + + +++ L++Q +VAG+ Sbjct: 103 GPNTCELLDPAEKKA--LHARLGPDPLRADADPELAWRRIGRSRTSIGVLLMDQSVVAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+R + P R R L + ++ ++ D + G Sbjct: 161 GNIYRAEALFREGVDPSRPGRDLTHGQW------KAIWADLVALMADGVRVGRIDTVRPE 214 Query: 241 HIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY ++G PC CG +R V AGR+ F+C CQ Sbjct: 215 HTPEAMGRPPRVDDHGGEVYVYRRSGMPCFL-CGGEVRTGVLAGRNLFWCPACQ 267 >gi|111023233|ref|YP_706205.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110822763|gb|ABG98047.1| probable DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 249 Score = 98.9 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 94/288 (32%), Gaps = 44/288 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWRTANSLRDALEGKVLTRCDVR-------VPRYATVDLSGQLVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + I HL M G++ I + P H + T + + + + Sbjct: 54 LIRVGDYS-IHTHLKMEGAWHIYAPDTK--WRRPTHQARIVLATEDRVAVGFSLGITEIL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + + + AL++Q+ +AG+ Sbjct: 111 G---------RDDEESAVGHLGPDLLGPDWDADRAIRNLRAAGDQPIGLALVDQRNLAGL 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P + L L + + + Sbjct: 162 GNVYRNEVCFLRGVHPYTPSS-----EVADLPALVTLAHRMIHIDKNNSI---------- 206 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VYG+ G+ C CG +I + F+CTYCQ Sbjct: 207 ---------RHRPWVYGRAGKRC-RRCGTVIEGHDLGQQQIFFCTYCQ 244 >gi|254382138|ref|ZP_04997500.1| DNA glycosylase [Streptomyces sp. Mg1] gi|194341045|gb|EDX22011.1| DNA glycosylase [Streptomyces sp. Mg1] Length = 280 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 96/262 (36%), Gaps = 27/262 (10%) Query: 27 CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 L R +LR P + G+ +DV+ R K+LL +EG L++ HL M G++ + Sbjct: 41 ELLRSDLR--VPRLATVDLTGRTTLDVTPRGKHLLARIEGGLTLHSHLRMDGAWHVFAAG 98 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 + L T+T R ++L+ T + + Sbjct: 99 EKWRGGPDY--EIRAVLGTATHT-------AVGYRLPVLELLRTRDEDRVVGHLG-PDLL 148 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + A+ L ALL+Q+ +AGIGNIY E + A+++P Sbjct: 149 GPDWDPALATARLLAAPERPLGEALLDQRNLAGIGNIYKSELCFLAQVTPWTPVG----- 203 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 L L A ++ +D I VYG+ PCL Sbjct: 204 ---------ALPGSDVPRLAGAAHRLLAANKDRRRNTTGIHRPGQDLFVYGRARRPCL-R 253 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG +R Q R T++C CQ Sbjct: 254 CGTPVREAPQEDRPTYWCPRCQ 275 >gi|227548550|ref|ZP_03978599.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] gi|227079379|gb|EEI17342.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] Length = 264 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 99/291 (34%), Gaps = 34/291 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RFD +++ K+L I Sbjct: 1 MPEGHVIHRLAAHLNSGFRGGPLSVSSPQGRFDASPIDASSL-----TLAEAHGKHLFIC 55 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ GS E + + + R G Sbjct: 56 FSTGHIVYIHLGLIGSLRFEPARD-------VWGQIRLRIVAGDVAANLR---------G 99 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 S L G +P + + L + + + +++QK++AG+GNI Sbjct: 100 PQFCRYVSPAEMQAILDRTGEDPLRDDASPDALFARVGASKRTIGSLMMDQKLLAGVGNI 159 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y EAL+R +SP +D + ++ ++ ++ G H Sbjct: 160 YRAEALFRQGISPFVPGCQ------LERDAFDAVWADLVSLMRYGVEHGRIDTVRDEHTP 213 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + GEPC CG+ I GR+ F+C CQ Sbjct: 214 EAMGRDPRKDDHGGEVYVYRRAGEPCF-VCGEPIAVRKVEGRNLFWCPKCQ 263 >gi|309811758|ref|ZP_07705534.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434281|gb|EFP58137.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 289 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 100/291 (34%), Gaps = 18/291 (6%) Query: 4 LPEVEIIRRNL---MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY- 59 +PE + R + RF S G+ K+ Sbjct: 1 MPEGHVTHRIAGMMNDNFAGRIIKS---SSPQGRF---AESSTRIDGRAFDHAEAYGKHM 54 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + + +HLG+ G F + ++ P + L +++ R Sbjct: 55 LVAFEGLDERVNIHLGLLGKFFWTYGVEP--VEAPITGAIRWRLGASSDDGDARGSVVMD 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + ++T + + LGP+P + + ++ + L++QK+ G Sbjct: 113 LRGPNVCALKTPDEVAA-IVGKLGPDPLRVDADPDVAWVRIRHTSTPIAALLMDQKVFNG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+R L P + L + L+ + + D Sbjct: 172 VGNIYRAEVLFRHGLDPKMPGKFLRRTEFDAIW--ADLVALMPLGVRDGRIDTVRDEHSP 229 Query: 240 --VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D + VY + G+PCL CG + AGR+ F+C CQ Sbjct: 230 EIMGRDPRVDKHGGEVYVYRRAGQPCL-VCGTPVAIEEFAGRNLFWCPRCQ 279 >gi|256379789|ref|YP_003103449.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255924092|gb|ACU39603.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 265 Score = 98.9 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 103/297 (34%), Gaps = 46/297 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + L R LR P +A G++++ V K+L Sbjct: 1 MPEGDTVFLAGHRLADALTGRV-----LLRGQLRH--PRFATADLAGREVLGVRSVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G+LS+ H M G++ + + + P H + + + + Sbjct: 54 FTRFSGDLSLHSHFRMDGAWHLYRPG--ERWRRPGHQARAVFEVPDRQAIGFAL------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLG--PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++L+ T+ +++ + D + A + + L ALL+Q+++A Sbjct: 106 --HDLELLPTADEHRLVGHLGPDLLADDWDEAAEAEAVRGLVAEPERELGLALLDQRVLA 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN+Y E + +SP ++ L R Sbjct: 164 GVGNLYKAEVCFLLGVSPWSPVSAVDPVETVRLCRRLLLANAW---------------RP 208 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 GS+ V+ +TG PC CG R+ G R ++C CQ Sbjct: 209 EQSTTGSL-RRGQQHWVFERTGRPCA-RCGT---RVRVGGQGAGVLERVAYWCPRCQ 260 >gi|269795741|ref|YP_003315196.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097926|gb|ACZ22362.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 351 Score = 98.5 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 102/355 (28%), Gaps = 74/355 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V T + + RF +A G + K + Sbjct: 1 MPEGHTVHRLARTFGEVFGGAT---VEVSSPQGRF---AAGAALLDGLVLHSAEAVGKQM 54 Query: 61 LIEL-------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKN---PQHNHVTISLT 104 + + + VHLG+ GS+ + P+ Sbjct: 55 FLGFGPADHLPTAEGLADDLRWLRVHLGLYGSWTFAADGSTQVAHAIGAPRKRVGERETV 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP-------------------------- 138 T V D E Sbjct: 115 LEAGTPGNVVAPTTGLDQHDPDGPEPWDPPDPRGAVRARILSEHAVADLTGPTACEVVSP 174 Query: 139 ------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 R LGP+P + + S + L+NQ +VAG+GNIY E L+RA Sbjct: 175 DAALAVQRRLGPDPLRGDADPERFVAAVRRSRSAVGLLLMNQDVVAGVGNIYRAEVLFRA 234 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-------DAGGSSLRDYV----- 240 + SP R + ++ I AI G+ D Sbjct: 235 EQSPTTPGRD-VPAEVLRAMWDDLVVLMADGAAIGAIVTTRPGDRGDGAHPADEKAPGRR 293 Query: 241 ----HIDGSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D G +F VY + G+PC C + R AGR+ F+C CQ+ Sbjct: 294 RVRQNTDAEPGAVPRDESFYVYQRDGQPC-RVCRTEVARAEMAGRNLFWCPTCQR 347 >gi|253317168|ref|ZP_04840381.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 187 Score = 98.5 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 14/194 (7%) Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 H HV L+N+ ++IY+D RRFG + V + Y P + + Sbjct: 8 HWHVIFELSNDK-----KLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLN 62 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 HQ KN +K +L+ K++AG GNIY CEAL+RA + P +K + L Sbjct: 63 RIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYV 122 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + +VL + I GG+S+ DY H DG G Q +VY +P CG I + Sbjct: 123 R------EVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKI 173 Query: 276 QAGRSTFYCTYCQK 289 A R++ YC CQK Sbjct: 174 IATRNSHYCPVCQK 187 >gi|310828563|ref|YP_003960920.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] gi|308740297|gb|ADO37957.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] Length = 277 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 106/294 (36%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I L ++K + + +F F P G K+ + Sbjct: 1 MLELPESYTIAGQLDEIVKGKQIEQVVAGASPHKFAFFNGEPEACRGQLLGMKVDRATSY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ IE G+ +++ G++ ++ K P+ + + ++ + + +Y Sbjct: 61 GGYVEIE-FGDKRLLLGDGVNIRYL------EAKEKKPKKHQLLLTFEDESALVFSVAMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 E Y P + ++ KKN++ K L ++ Sbjct: 114 G---AIWAYTEGENDNYYHQVAREKPSPLSGEFNWEWFEGIVAAAKKNTSAKALLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L+ A+++P K ++ L +L ++ L GG Sbjct: 171 IPGLGNGCLQDILFNARVNPRTK------LEYLTEEELSRLFDSVKATLHQMTVKGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G G +++ + Y PC CG I + G S +YC CQ Sbjct: 225 E--KDIFGMKGGYKSILSKNTYK---APC-PVCGGAIVKEAYLGGSVYYCPNCQ 272 >gi|262201979|ref|YP_003273187.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] gi|262085326|gb|ACY21294.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] Length = 267 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 94/290 (32%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R ++ + ++ RF +AA G K+L Sbjct: 1 MPEGHTLHRLARRHTRLLGGRR---VTVNSPQGRF---ADGAAAVDGMTFGRADAWGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G + + A + V + + ++ R Sbjct: 55 VHRYRDGRREQLIHIHLG--LYGAFTEAPVPMDDPVGQVRLRIESDEIGIDLR------- 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G + LGP+P + + L++QK+VAG+ Sbjct: 106 --GPTACELYGPADLEALVARLGPDPLRRDAKPVDAWTAIRSSRRPIGALLMDQKVVAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+RA + P+R + + L ++ ++ + G + Sbjct: 164 GNVYRAEVLFRAGIDPMRPGTIITRAEFDG------LWADLVDLMRIGVRRGRIHVMRPD 217 Query: 241 HIDGSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GE C CG + R ++C CQ Sbjct: 218 DDHGAPSYAPDRPRTYVYRRAGEAC-RICGTPVLIAELEARKLYWCPVCQ 266 >gi|148274094|ref|YP_001223655.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832024|emb|CAN02997.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 269 Score = 98.5 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 100/294 (34%), Gaps = 37/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V ++ L + V D L A G++I K+L Sbjct: 1 MPEGDSVFVLAARLRAQVGGALVADGELRSG-------ARAGARLGGRRITGFDTHGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ ++ HL M GS+ + P + V + L + + Sbjct: 54 LMRLDDATTLHTHLRMQGSWTVTGAGKRVPQRIQHQVRVRLRLDDGRTLWGIDL------ 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +DL+ T + D+ A+ ++ + + ++ ALL+Q+ +AG+ Sbjct: 108 --PVVDLIPTRDERAAIGHLG-PDPLRDDWDPALAVSRLAARPDDAIRAALLDQRPMAGL 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN++V E + + P + R L L + A + D Sbjct: 165 GNLWVNEVGFLRGVHPATRVRD------VDLPPLVDLAARSLRHSATVPAAYQITTGDPR 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR------RIVQAGRSTFYCTYCQ 288 V G+ G PCL CG + + GR ++C CQ Sbjct: 219 RG--------RTHWVVGRAGRPCL-RCGTTVIGVDDPGSTSERGRRAWWCPRCQ 263 >gi|325128283|gb|EGC51167.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 72 Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 +++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG+ +PC CG ++ + Sbjct: 1 MVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETL 59 Query: 277 AGRSTFYCTYCQK 289 R TFYC CQK Sbjct: 60 GQRGTFYCPNCQK 72 >gi|54288361|gb|AAV31649.1| hypothetical protein Red2C11_65 [uncultured alpha proteobacterium EBAC2C11] Length = 291 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 106/288 (36%), Gaps = 34/288 (11%) Query: 4 LPEVEIIRRNLMMV---MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 LPE I R + N +T + RF ++ G+ I++ K+L Sbjct: 28 LPEGHTIHRAARDHNSLLANQKLT---VLSPQGRFT---EGASRLTGRICINIEAFGKHL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++ VHLG+ G + A+P V + L NT+ N P Sbjct: 82 IYHFDNGEALHVHLGLFGKIRKQRLPAAEPRGA-----VRVRLVGNTHLIDI----NGPN 132 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + E + +GP+ + N + K + + +++Q ++AGI Sbjct: 133 ICEILAEHEF-----MDLINRIGPDVLRSDANPTLAFEKIKKSKAPIGRLIMDQAVMAGI 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LWR L P + Q ++ ++ + +L + D Sbjct: 188 GNIYRSEILWRQALHPETPGNRIDQQTFN------RIWEDARALLTIGVKHNAIITVDGA 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +++ K E C C +RR +GR F C CQ Sbjct: 242 RASSR--RYRERVNIFAK--EVC-PRCKGKVRRFEISGRRAFVCEVCQ 284 >gi|227354783|ref|ZP_03839200.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165101|gb|EEI49932.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 160 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 11/129 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + H+H+ + + + Y DPR Sbjct: 60 LIEL-NQGWIIVHLGMSGSVRILPEEQPEEK----HDHIDLVFRDGK-----VLRYTDPR 109 Query: 121 RFGFMDLVE 129 RFG E Sbjct: 110 RFGAWLWCE 118 >gi|220912909|ref|YP_002488218.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] gi|219859787|gb|ACL40129.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] Length = 317 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 106/328 (32%), Gaps = 53/328 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + + RF +A G ++ K+L Sbjct: 1 MPEGHSVRRLARQFGDVFTGERLA---VSSPQGRF---SGGAALLDGHTMVAAEAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC-------------AKPIKNPQHNHVTISLTNNT 107 + + + VHLG+ G++ + + Sbjct: 55 FLHFDNARVLHVHLGLYGAWSFGGDRTFTGSSSIGAPRRVGEQESPASGDADASYAGPPA 114 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSL-----KYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 RV + + T + Q R + +A Sbjct: 115 PVGAVRVRLASGHGWADLRGATTCETITEAEVQAVLDRLGPDPLRNLRGDAGRFAANLAG 174 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + L++QKI+AG+GN+Y E L+R +L P +L KL +++ Sbjct: 175 RKPTIAALLMDQKIIAGVGNVYRAEVLFRQRLDPYLPGGALSDA------AARKLWRDVV 228 Query: 223 KVLIDAIDAGG---SSLRDYVHIDGSIGYFQNA-------------------FSVYGKTG 260 ++ D + G ++ + + +G G +NA VY + G Sbjct: 229 NLMSDGVADGRIITTAAKYWTRRNGKTGRVRNADGTVSLPAKTASMPVRADAHYVYKRNG 288 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG ++ GR+ ++C CQ Sbjct: 289 LPC-RVCGTVVLAAELVGRNLYWCPVCQ 315 >gi|111219798|ref|YP_710592.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111147330|emb|CAJ58980.1| Formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 248 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 103/268 (38%), Gaps = 30/268 (11%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 + RF + G+ + D K+LL+ + + + VHLG+ G++ Sbjct: 3 VASPQGRFT---EGARRLDGRPLTDAEAHGKHLLLRFDHDQVLHVHLGIYGTYAFGPGPA 59 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 P V + LT +T Y D R +L+E LGP+P Sbjct: 60 PVPTGA-----VRLRLTADTG-------YADLRGPNACELLEPGGVKT--LRDRLGPDPL 105 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + + + + LL+Q +VAG GNIY E L+RA + P+ R L + Sbjct: 106 RGDADPDLAWRRIERSRTPIAVLLLDQMVVAGPGNIYRAEVLFRAGVDPLLPGRDLTRRQ 165 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN------AFSVYGKTGE 261 T + ++ ++ D + G H ++G VY + G+ Sbjct: 166 WT------AIWADLVTLMADGVRTGRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRAGQ 219 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 PCL C + A R+ F+C CQ+ Sbjct: 220 PCL-ICATTVLTNRLAARNLFWCPGCQR 246 >gi|262201744|ref|YP_003272952.1| formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085091|gb|ACY21059.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Gordonia bronchialis DSM 43247] Length = 261 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 89/298 (29%), Gaps = 46/298 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + + G + V R K+L Sbjct: 1 MPEGDTVYAAADRLRRALAGQVLTYCQFR-------VPRYATVDFAGHTVTGVRSRGKHL 53 Query: 61 -----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + SI HL M G++ + A+ + H + + + Sbjct: 54 LIDLADPQGNRAPSIHSHLKMEGAWHVHRVG-ARWRRPGHHARIVLRTSTYEAVGFEL-- 110 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +++ D+ + + + ALL+Q+ Sbjct: 111 ----------GILDLLDDPDAALSYLGPDLLGDDWDAEEAIRRIRARPAEAIGLALLDQR 160 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN++ CE + + P + KL+ A G + Sbjct: 161 LMAGVGNVFRCEICYLRGVLPTTPVADVDVPGMVETS--RKLL--WNNRTRTARSTTGQT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + VYG+ G+ C C +I R R ++C CQ+ Sbjct: 217 APNART------------WVYGRRGQLC-RRCATLIERGFLGDEGTERVIYFCPTCQR 261 >gi|134101245|ref|YP_001106906.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007765|ref|ZP_06565738.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133913868|emb|CAM03981.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 258 Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 111/294 (37%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+VE RR + V D+ + + RG+ + + R K+L Sbjct: 1 MPELPDVEGFRRVAAEAAR-QRVRDVEVFDPQVVRG----LVEQVRGRYLGEARRHGKWL 55 Query: 61 LI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ + + ++VH GM+G + H+ V + LT + + Sbjct: 56 VLPTSSRDGDDPPWLLVHFGMTGMLLRCPPGEDVHA----HDRVVLHLTRDD------LR 105 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D R+ M +V S + + LK+AL++Q Sbjct: 106 YRDMRKLKGMRVVRRSEVDGFLDELGPDAAAVP----LPDFRACVGRGRRALKSALMDQS 161 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAG+GN+ V E LWRA+L P T L + L + ++ VL A + G Sbjct: 162 TVAGLGNLCVDEILWRARLDPKTPTTELDGDRW------RSLHRTMRSVLRQA-ERAGRV 214 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GE C C +RR AGR+T +C CQ+ Sbjct: 215 PDRPSWLTGHRDDP----------GERC-PRCSGTLRRAKVAGRTTVWCPACQR 257 >gi|325002792|ref|ZP_08123904.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudonocardia sp. P1] Length = 275 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 92/295 (31%), Gaps = 39/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + L L G + V+ K+L Sbjct: 1 MPEGDTVYLAAVRLHAALAGHELLRGELRHPRLV-------EHDLAGLTVTGVAPVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + S+ H M G++ + + R Sbjct: 54 FTRFDDGRSLHSHFRMDGAWHLYRPG----------MRWRRVAHEARAVLETRERVAVGF 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLG--PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++L+ T+ ++ A L + + L LL Q+++A Sbjct: 104 ALHDLELLPTADEHTLVGHLGPDLLDPDWGAGHEAEALRRMSARGDHELGLVLLEQRVMA 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN+Y + +R L+P +L + + ++ V+ + S+ Sbjct: 164 GLGNLYRNDICFRLGLTPW---------------VLVRDVPDLPGVIALSRTLLSSNKDR 208 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 A V+ ++G PC CG IR Q R T++C CQ+ Sbjct: 209 PEQTTTGSLAAGEAHWVFERSGRPC-RRCGTRIRTADQGEPPRDRVTYWCPRCQR 262 >gi|62391849|ref|YP_227251.1| formamidopyrimidine-DNA glycosylase protein [Corynebacterium glutamicum ATCC 13032] gi|41222996|emb|CAF18941.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 269 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 109/297 (36%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMKNM--TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE +I R + KN T+ D RF +A G +I K+L Sbjct: 1 MPEGHVIHRLAGELTKNFGDTILDAT--SPQGRFTSE---AAIINGHRIAVAEAYGKHLF 55 Query: 62 IEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +E + +HLG+ G+ E + + + L++ R Sbjct: 56 VEFDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR----- 103 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 G + + + LG +P + + + + + ++ + L++QK+ A Sbjct: 104 ----GPQWCRLITDAERTQAIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFA 159 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+R +SP + + + ++ ++ D + G Sbjct: 160 GVGNIYRAETLFRLGISPFTIGKDITTAQF------RSIWADLVGLMKDGVVTGRIDTVR 213 Query: 239 YVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 214 PEHTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 269 >gi|23309003|ref|NP_602196.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|21325773|dbj|BAC00394.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 271 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 109/297 (36%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMKNM--TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE +I R + KN T+ D RF +A G +I K+L Sbjct: 3 MPEGHVIHRLAGELTKNFGDTILDAT--SPQGRFTSE---AAIINGHRIAVAEAYGKHLF 57 Query: 62 IEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +E + +HLG+ G+ E + + + L++ R Sbjct: 58 VEFDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR----- 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 G + + + LG +P + + + + + ++ + L++QK+ A Sbjct: 106 ----GPQWCRLITDAERTQAIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFA 161 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+R +SP + + + ++ ++ D + G Sbjct: 162 GVGNIYRAETLFRLGISPFTIGKDITTAQF------RSIWADLVGLMKDGVVTGRIDTVR 215 Query: 239 YVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 216 PEHTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 271 >gi|225571055|ref|ZP_03780072.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] gi|225160136|gb|EEG72755.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] Length = 275 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 93/296 (31%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVS 54 M ELPE + R L + TV + +F P + RG+++ Sbjct: 1 MIELPE--ALARAAELDKTIAGKTVAKVYPPSSPHKFCWFNGEPEAYDRQLRGREVQKAE 58 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ + G + + G++ + + + + L + Sbjct: 59 GFGIFVELRFSGGFGLCFNDGVNVRLLEPSAGLPEKYQLRIDFTDSWVLIFTVAMYGGIL 118 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 Y + +Y L P + K + K L + Sbjct: 119 CYEH----------TCANEYYVLSKERLSPLADEFDEEYFRGLLAGVKPGISAKAFLAAE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+RA + P +K L +L ++ VL + GG Sbjct: 169 QRIPGLGNGVLQDILFRAGIHPKKKVGKLTAEET------ERLFGSVKGVLAEMSRLGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GS G + + Y PC C I + G S +YC CQ Sbjct: 223 DTE--KDIWGSPGKYPTVMSKNTYR---NPC-PICKGEIVKTAYLGGSVYYCPRCQ 272 >gi|326381980|ref|ZP_08203673.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199406|gb|EGD56587.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 261 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 86/296 (29%), Gaps = 45/296 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+ P + +A G + V K+L Sbjct: 1 MPEGDTVYRTAHRLRRALAGRTLDRTDFR-------VPRYATADLSGSRAAAVRSVGKHL 53 Query: 61 LIELEGNLSI----IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 I+ E HL M G + + T + P H + + + + Sbjct: 54 FIDFERPGGDEISLHTHLMMEGVWEVYRTG--SRWRRPAHTARIVLRSGEVEAVGFDLAV 111 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + + + A + + + A+L+Q+ Sbjct: 112 VELLTDPAAAVAHLGPDLLGD-----------DWDPARAVARLSAEPEVPIGVAVLDQRN 160 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN+Y E + ++ P + L+ + + G + Sbjct: 161 LAGIGNVYRSELCFLRRIHPATPVGDVDLPKTVDLAH-RLLVDNRLRAVR---STTGVTA 216 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 R VYG+ PC CG + R + RS + C CQ Sbjct: 217 R------------GRELWVYGRDRRPC-RRCGTAVMREMLGAPPTARSVYLCPRCQ 259 >gi|119962578|ref|YP_946580.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949437|gb|ABM08348.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 276 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 100/307 (32%), Gaps = 53/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + +T P + G + +V + K+L Sbjct: 1 MPEGDSIWRAATRLNEALAGKVITSSDFR-------VPRFATLNLSGWTMTEVVPKGKHL 53 Query: 61 LI-------------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 L+ L+I HL M G+++I + K + + Sbjct: 54 LMRLAGPVDEEPGASRKPRALTIHSHLKMEGNWMIYPPG-GRWTKPGHTARCVLRTDSAD 112 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 G +++V T+ + + + L + + + Sbjct: 113 AVGFS---------LGILEVVPTAEEDKIVGHLG-PDLLGPDWDEEEALRRLRAEPDVTV 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 ALL+Q+ +AGIGNIY CEA + + + P + T D L + + Sbjct: 163 GFALLDQRKLAGIGNIYRCEACFLSGIHPALPVGEVPDLAKTVNDAKRLLGENLGPGRRT 222 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RST 281 + GY VYG+ +PC CG +RR + AG R Sbjct: 223 TLGPRAM----------RPGY-----WVYGRERQPC-RRCGTTVRRGLLAGPDGTEERDI 266 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 267 YFCPRCQ 273 >gi|152965456|ref|YP_001361240.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151359973|gb|ABS02976.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 103/297 (34%), Gaps = 42/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + L +LR+ P + G+++++V K++ Sbjct: 1 MPEGDTVWRTARRLHRALAGR-----ELLVSDLRW--PSLATVDLSGREVLEVVSAGKHV 53 Query: 61 LIE-----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L + L++ HL M GS+ +E T H S + Sbjct: 54 LTRVAAGGDDPPLTLHSHLRMEGSWFVERTGDP---------HGRRSASGIRAVLTTAEW 104 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + G +DLV T + + + L ALL+Q+ Sbjct: 105 TAVGHKLGMLDLVSTDREAELVGHLG-PDLLSPGWDPEEARRRLLADPARELGAALLDQR 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+G +Y+ EA + +L+P L G +L++L+ + + Sbjct: 164 VLAGVGTLYMAEACFLVRLTPWSPVSDLEDPEG-FLALLHRLLHVNKDRPAQ------VT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 D H + ++G PCL C +R R+ FYC CQ Sbjct: 217 TGDLRHG--------RQHFAHARSGLPCL-RCAGTVRVAPIGVPPQDRTAFYCPGCQ 264 >gi|229820940|ref|YP_002882466.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229566853|gb|ACQ80704.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 267 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 102/296 (34%), Gaps = 37/296 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + +T L +L A G + + K+L Sbjct: 1 MPEGDVLLRVARRLTSALDGAALTHAELRWPSL-------GGADLVGVRSLGTVSVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS-CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + ++ HL M G++ +E T A+ + V L + T Sbjct: 54 LTRFDDGRTLHTHLRMDGTWRVEPTERVARTPALARRTAVRAVLGTPSWTC-------LG 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGP--EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G MDLV T + + + A + + + L++Q+++ Sbjct: 107 MDLGMMDLVRTRDEASVVGHLGPDVVGDDYEAHGRAAIVAGIAAQGTRPIGEILIDQRVL 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIG IY+ E+L+R ++ P R + ++ A ++ Sbjct: 167 AGIGTIYLAESLFRHRIRPWRPANEVDDVGSLVDTARALMLAS-------ANSPRVTATG 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 D G++ V+G+ G C CG I R FYC CQ+ Sbjct: 220 DTRAGRGTL--------VHGRAGRSC-PRCGTAIAVAAVGTPPYDRPAFYCPDCQR 266 >gi|288921551|ref|ZP_06415825.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] gi|288347068|gb|EFC81371.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] Length = 272 Score = 97.4 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 103/269 (38%), Gaps = 30/269 (11%) Query: 26 ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHT 85 + + RF + G+ + K+LL+ + + +HLG+ G + + Sbjct: 17 VRVESPQGRF---ADGAGLLDGRVLAQAEAYGKHLLLRFDDERVLHIHLGIYGKYQLGPA 73 Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE 145 +P V + LT+ T Y D R +L+E L LGP+ Sbjct: 74 PAPEPTGA-----VRLRLTSGTG-------YADLRGPNACELLEPGEVKA--LLDRLGPD 119 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P + + + + + L++Q +VAG GNIY E L+RA + P R L + Sbjct: 120 PLRPGADPEPAWRRIGRSRTPVAQLLMDQAVVAGPGNIYRAEVLFRAGVDPYLPGRDLTR 179 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN------AFSVYGKT 259 + ++ +++ D + AG H ++G VY + Sbjct: 180 AQW------ELIWSDLVELMADGVRAGRIDTVRPEHTPEAMGRPPRVDEHGGEVYVYRRA 233 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ CL C +R A R+ F+C CQ Sbjct: 234 GQLCL-VCEAEVRTARLAARNLFWCPRCQ 261 >gi|226365740|ref|YP_002783523.1| DNA glycosylase [Rhodococcus opacus B4] gi|226244230|dbj|BAH54578.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 249 Score = 97.0 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 91/288 (31%), Gaps = 44/288 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWRTANSLRDALEGKVLTRCDVR-------VPRYATVDLSGQVVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + I HL M G++ I + P H + T + + + + Sbjct: 54 LIRVGDYS-IHTHLKMEGAWHIYAPD--SRWRRPTHQARIVLSTEDRVAVGFSLGITEIL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + + + AL++Q+ +AG+ Sbjct: 111 A---------RDDEESAVGHLGPDVLGPGWDADTAIRNLRAAGDQPIGLALVDQRNLAGL 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + + P T L L + + Sbjct: 162 GNVYRNEVCFLRGVHPYTPA-----AEVTDLPALVALAHRMIHADKNNSV---------- 206 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VYG+ G+ C C +I + F+CTYCQ Sbjct: 207 ---------RHRPWVYGRAGQRC-RRCRTVIEGHDLGQQQIFFCTYCQ 244 >gi|154509232|ref|ZP_02044874.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] gi|153798866|gb|EDN81286.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] Length = 345 Score = 96.6 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 98/355 (27%), Gaps = 76/355 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + RF +A G + V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGI---VSASSPQGRFASS---AALLDGWVMQRVRVHGKHM 54 Query: 61 LI---------------------------------ELEGNLSIIVHLGMSGSFIIEHTSC 87 I + + +HLG+ G + Sbjct: 55 FIGFVPPIEGETYEAGVALLEGAAAGSGEPILGEDAPWPDRWVHIHLGLYGWWRFNGDET 114 Query: 88 ------------AKPIKNPQHNHVTISLTNNTNTKKYRVI-------------------- 115 K + H K Sbjct: 115 VVDEGHGVAHRIPNVPKGEWNGHSETRWGEGFGEAKAGEWEPPEPVGAVRLRLFNDHAVA 174 Query: 116 -YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 P R + E L ++ H K + +++Q Sbjct: 175 DLVGPNRCDLITDEERIKAESKLGPDPLDAGARSDAEAMERFAQVAHSKKRAIGEIVMDQ 234 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ + A Sbjct: 235 SIIAGVGNIYRADALFLAGISPHRKGANISIKR---LRELWVLICDLMNRGLAAGRLDTM 291 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY +T PCL CG IR + R F+C CQ+ Sbjct: 292 DPEEAPNPPIEGDEEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|14571863|gb|AAK67295.1|AF279677_1 formamidopyrimidine-DNA glycosylase [Brucella abortus] Length = 63 Score = 96.6 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI A GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C Sbjct: 1 AIAAEGSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCAS 60 Query: 287 CQ 288 CQ Sbjct: 61 CQ 62 >gi|120437537|ref|YP_863223.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] gi|117579687|emb|CAL68156.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] Length = 293 Score = 96.2 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 31/288 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + + + + + + + F A + + ++ KYL Sbjct: 34 MPELPEVAYQKIYVDSTSLHHKIVKVDMGADKIFQSPKSEFEATLLKNEFVSSTQIGKYL 93 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ ++VH GM+G + + +H +T++ + ++ + PR Sbjct: 94 LLKLKEKGYLVVHFGMTGKMDYF-----QHDEIQKHAQLTLTFEDG-----GKLSFVCPR 143 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + L + + + P + + F K ++K AL++Q +AG+ Sbjct: 144 KFGKLFLTTSPDE----FRKKQKLGPHATEISEEDFHNLFDGKRGSVKTALMDQSFIAGL 199 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+YV E L+++ + P K+ +L + + + + + + + Sbjct: 200 GNLYVDEILFQSGIHPKSKSENLSDKD-------------LSNMFKNMVAILETVTKSKT 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + GE C I+ I GRST++C+ CQ Sbjct: 247 EGNPIPDTY---LRNHRNEGEAC-PIAKGKIKMIKVGGRSTYFCSECQ 290 >gi|256375288|ref|YP_003098948.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255919591|gb|ACU35102.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 267 Score = 96.2 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 106/295 (35%), Gaps = 35/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R V +T + RF + A G+ ++ K+L Sbjct: 1 MPEGHVLHRIARLHQRVYAGQALT---VTSPQGRFA-----AEAVDGRVLVKAEAHGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + VHLG+ G F +P+ + V + + Sbjct: 53 LHVYGPDAIVHVHLGLYGKFAEHEPPVTEPVGQVRMRIVGERNWTDLRGPAACEVLTLDG 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 LGP+P + + L L++QK+VAGI Sbjct: 113 VAA--------------LRARLGPDPLRRDAKPAEALARVRRSKQPLATLLMDQKVVAGI 158 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R L P+++ ++ + + + ++ ++ D + AG Sbjct: 159 GNIYRAELLFRHGLDPMKQGSAVDEE------LWAAMWPDLVALMRDGVKAGRIDTVRPA 212 Query: 241 HIDGSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H+ G VY + G+PCL CG + V A R+ ++C CQ+ Sbjct: 213 HLPEVTGRAPREDRHGGEVYVYRRAGQPCL-VCGTPVAHAVLAARNLYWCPTCQR 266 >gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] Length = 288 Score = 96.2 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 99/303 (32%), Gaps = 39/303 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EVE R+ + V + H + F + G + R Sbjct: 1 MPELAEVEFFRKLWNPGI-GAAVVRVLTHPRARVFRECEGGADELARLLTGAVLDGSEAR 59 Query: 57 AKYLLIELEG----------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 K ++ + + +HLGM+G+ ++ S H + Sbjct: 60 GKQMIFRFRTDGGGHKCDDVYVWLGIHLGMTGALRMQGPSEQFRQTASDHLALVQ----- 114 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + +++NDPR FG + + + + + + + Sbjct: 115 ---AERVLVFNDPRMFGRVRFATGAEPPDW-WISLPPEVVSREFTVDGVAAFLKRRSRAP 170 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL Q+ GIGN E LWR+ + P + L + KL +E + V Sbjct: 171 IKAVLLMQERFPGIGNWMADEILWRSAIHPRQLAGELTPAE------IRKLWRETRWVCE 224 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A G + D F + + G C G + R GR+T + Sbjct: 225 QAQATIGETYADPPS----TWLFPHRWE----DGGKC-PRTGAPLVREQIGGRTTCWSPK 275 Query: 287 CQK 289 Q+ Sbjct: 276 RQR 278 >gi|257055240|ref|YP_003133072.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256585112|gb|ACU96245.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 270 Score = 96.2 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 30/269 (11%) Query: 26 ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHT 85 + + RF +A G + K+L + VHLG+ G+F Sbjct: 23 VEVSSPQGRFSTE---AAVIDGHVMTAAEAFGKHLFHYYGSQGIVHVHLGLYGTFTEYPL 79 Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE 145 A+P+ V + L T+ + D R +L+ + LGP+ Sbjct: 80 PVAEPV-----GQVRMRLVGRTH-------WTDLRGPNRCELLTPPQAEA--LIARLGPD 125 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P + + + + + L L++Q ++AG+GN+Y E L+R ++ P+ RSL + Sbjct: 126 PLRDDADPQEAWERISRSRAPLAGLLMDQSVIAGVGNVYRAEVLYRQRIDPMLPGRSLSR 185 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA------FSVYGKT 259 L ++++++ + + G + H +G VY +T Sbjct: 186 RRWD------ALWADLRQLMREGVRLGRIDTVEPEHRPEVMGRAPRRDRHGGEVYVYRRT 239 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +PCL CG + + AGR+ ++C CQ Sbjct: 240 HKPCL-VCGTPVAQTKLAGRNLYWCPTCQ 267 >gi|269119716|ref|YP_003307893.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] gi|268613594|gb|ACZ07962.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] Length = 277 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 111/295 (37%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----PHHFSAATRGKKIIDVSR 55 M E+PE + + L +KN + ++ + +F F P +++A GKKI + Sbjct: 1 MLEIPESFNLAKQLNQTVKNKVIKNVKAAQSPHKFAFYFNDDPDNYNALLSGKKIEKIEP 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + I E + G++ ++ K P+ + + + +N+ + Sbjct: 61 IGGQVEITAENIRILFG-DGVNARYL------PAGEKIPEKHQLLMEFDDNSCIVCTVQM 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y F E Y + P D + K ++K L ++ Sbjct: 114 YGVLHAFT---HGENDNFYYHVAKTKPSPLSKDFDISYFEKIISDTKPTLSVKALLATEQ 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 + G GN + + L+ + ++P K + + +L Q I+++L+ + GG Sbjct: 171 RIPGFGNGILQDILFISGINPKTKIK------FLDSSDIDRLFQNIKEILLKMAENGGRD 224 Query: 236 LRDYVHIDGSIGYFQNAFSV--YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ S Y EPC CG I + G + ++C CQ Sbjct: 225 TE--KDLFGNYGNYKTVLSAKTYK---EPC-PVCGTAITKQAYLGGNIYFCPVCQ 273 >gi|311743069|ref|ZP_07716877.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313749|gb|EFQ83658.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 269 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 102/287 (35%), Gaps = 33/287 (11%) Query: 10 IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 + +L V RF + G+ + K+L + +E Sbjct: 1 MAHDLSEAFAGRRVRS---TSPQGRFA-----AGRLDGRVLAGAEAWGKHLFVSVEQVPW 52 Query: 70 I-IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT-NNTNTKKYRVIYNDPRRFGFMDL 127 VHLG+ G+F I + P V LT + + P + Sbjct: 53 QVHVHLGLYGTFRISRGG-----RLPVVGQVRWRLTASARSGAPVTADLRGPTACELLMP 107 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 E LGP+P +A H+ + + + LL+QK+++G+GN+Y E Sbjct: 108 DEVDAVLA-----RLGPDPLRADADADAAWHRVSRSGTPVAVLLLDQKVLSGVGNVYRAE 162 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+R + P+ R L ++ + ++ ++ + G H G +G Sbjct: 163 VLFRHGIDPMTPGRDLDRSRWD------AVWDDLVHLMAIGVRRGRIDTVRPEHEPGPMG 216 Query: 248 Y------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G CL CG I V AGR+ F+C CQ Sbjct: 217 RSARADAHGGEVYVYRRDGRACL-VCGTTICSTVLAGRNLFWCPGCQ 262 >gi|29347769|ref|NP_811272.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29339670|gb|AAO77466.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 273 Score = 96.2 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M ELPE + + + + +K+ +T++ H+ F P +S G++I Sbjct: 1 MKELPENQTLSKQINETLKDRVITEVFNATKFHKNTFYFGDPLTYSELLIGRRINSSMSF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ I L+ I G + + K P + + ++L NNT ++ Sbjct: 61 GMYVDIILDKETKISFGDGTNLKY------GTISNKMPNNYQLLLALDNNTYLTFTVGMF 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + + + Y L L P D + K S++K L ++ Sbjct: 115 GVIAAYTGIY----NDIYYKKNLDNLSPLSDDFNEQYFEKLCVGVKPKSSVKVLLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L+ AK++P R+ SL + + L+Q I+ L + I GG Sbjct: 171 IPGLGNGVLQDILFNAKINPKREINSLTDIDKS------ALLQSIKMTLKNMILQGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTG---EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + I G+ G ++ S +PC CG I + +G +YC YCQK Sbjct: 225 E--MDIFGNHGNYKTILS----KNTLSKPC-PQCGNPIIKETSSGGVVYYCPYCQK 273 >gi|38233426|ref|NP_939193.1| putative endonuclease [Corynebacterium diphtheriae NCTC 13129] gi|38199686|emb|CAE49345.1| Putative endonuclease [Corynebacterium diphtheriae] Length = 268 Score = 96.2 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 100/295 (33%), Gaps = 36/295 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ T+T L P + + G+ I V K+L Sbjct: 1 MPEGDSVFQLARRLS-FMQGRTITHTSLR-------VPAYATMRFDGRTITKVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + HL M G++ + + K V + L + + V Sbjct: 53 FMHIGS-EILHTHLKMEGTWAVHRAGD-RWRKPGHTARVVLHLDDAPHDPIEVV--GHEL 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + E A + + ALL+QK++AG+ Sbjct: 109 GFVRVFPDHEYPQRIAHLGPDVLSESWPTRGEAEARKRLLGQPERAIGLALLDQKVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + + + + + + + L+ A + + Sbjct: 169 GNEYRAEICFICGIHPATRIKDVDVDR----------VLSVTRRLMWANRFSPIRVTTGI 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 G Y V+G+ +PC CG +IR+ R ++C CQ Sbjct: 219 RRPGETSY------VFGRNHKPC-RRCGTLIRKSTLVDDPTTELERIIWWCPLCQ 266 >gi|227506303|ref|ZP_03936352.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227197115|gb|EEI77163.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 272 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 38/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + L + + + RF +A G ++ R K+L Sbjct: 1 MPEGHIIHHLAQRLDREFRGGPL---RVTSPQGRFAAE---AAVLDGTQLDFAEARGKHL 54 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + I +HLG+ GS E + + + ++ R Sbjct: 55 FLHFSADAPEHIIYIHLGLIGSLRFEPLDV-------VWGQIRLRIESDDLAANLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + L +G +P + L + H+ + ++ + L++Q + Sbjct: 104 -----GPQWCRLITDAEYDVALAKIGHDPIREDASPANLWPRVHRSSRSIGSLLMDQHLF 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+R +SP L ++ + +++ +++ + Sbjct: 159 AGVGNIYRAEVLFRQNISPFIAGNELDRHEFDV------IWEDLVELMRAGVPTARIDTV 212 Query: 238 DYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G PC CG++I GR+ F+C CQ Sbjct: 213 RPEHTPEAMGRAPRKDDHGGEVYVYRRAGMPCY-ICGELIAEKKLEGRNLFWCPTCQ 268 >gi|281414015|ref|ZP_06245757.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 303 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 102/315 (32%), Gaps = 40/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + RF +A G+ + K+ Sbjct: 1 MPEGHSVHRLARQFTDVFGGRRI---RATSPQGRF---AEGAALLDGQVLERARAHGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNT---KKYRV 114 ++ G + VHLGM G++ + + A I P+ + + Sbjct: 55 FADVSGGHVLHVHLGMYGAWTFGGDQDFAAASSIGAPRRIGEREVHDDGAPAAEPCRDAD 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPE-----------------PADNSFNAIYLT 157 + P + ++ + L N + Sbjct: 115 GWVQPPSPAATVRLRLRAEHGWADLIGASRCRALTPAEAADVVAGLGPDPLNDDDPAPFY 174 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + + L++Q V+GIGNI+ EAL+RA + P R R + + L L Sbjct: 175 DLARRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSAPD------LESL 228 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCG-QMIRR 273 + ++ + + G H G + ++A VY + G CL CG + I Sbjct: 229 WADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACL-VCGREAIVV 287 Query: 274 IVQAGRSTFYCTYCQ 288 A R + C CQ Sbjct: 288 EEMAARKLYRCLTCQ 302 >gi|312601525|gb|ADQ90780.1| DNA glycosylase [Mycoplasma hyopneumoniae 168] Length = 159 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 7/134 (5%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + K + ++K LL+QKI++G+GNIY E + K+ P + + + + Sbjct: 29 FYQKIRKSSRSIKAILLDQKIISGLGNIYADEVCFATKIFPGKAAKLISRKE------AE 82 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +I +K+L ++I GGSS+ Y ++ G FQN V+ K PC SNC I + V Sbjct: 83 LIIDFSKKILQESIKLGGSSISSYTSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTV 141 Query: 276 QAGRSTFYCTYCQK 289 AGR T++C +CQK Sbjct: 142 IAGRGTYFCPFCQK 155 >gi|289810522|ref|ZP_06541151.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 103 Score = 95.8 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+EL + II+HLGMSGS I ++ + +H+HV + ++N Sbjct: 60 LLEL-PDGWIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKIL 103 >gi|311696998|gb|ADP99871.1| endonuclease 8 [marine bacterium HP15] Length = 271 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 93/287 (32%), Gaps = 28/287 (9%) Query: 10 IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR-----AKYLLIEL 64 + ++ + T + F+ F A RG+++ V R + + Sbjct: 1 MVDDIHKAVGGKTAQSVFFA-----FEHLKPFENALRGRRVERVEARSKAVLGFFEATDE 55 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 +G + H + G + K + L K Sbjct: 56 DGPWCVYSHNQLYGKWR--------MGKPDREPSTNRQLRFAIIGPKKAARLYSASDIQL 107 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + E S L + + + + NL LL+Q VAGIGN Sbjct: 108 VRPDELSEVPYLSRLGPDPLNQEVSIDQLLAVFDDKRFRGRNLGGLLLDQAFVAGIGNYL 167 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS-LRDYVHID 243 E L+ A++SP + R L + + +L + I ++ G + D Sbjct: 168 RSEILFEARVSPRARPRDLDADQQS------RLAEAILTLVQRTYRLKGITNPPDRAERL 221 Query: 244 GSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Q V+ + GE C +C + + + A R +YC CQ Sbjct: 222 KQEGWTFGQRRHMVFNRDGERC-HDCASPLVKTMMASRRLYYCPECQ 267 >gi|325526891|gb|EGD04365.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 65 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DAI+ GGS+LRD+V +G GYFQ VY + G PC CG IR+IVQ RST++C Sbjct: 3 ADAIERGGSTLRDFVGSNGESGYFQLDCFVYDRAGAPC-RVCGTPIRQIVQGQRSTYFCP 61 Query: 286 YCQK 289 CQ+ Sbjct: 62 TCQR 65 >gi|119716555|ref|YP_923520.1| formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] gi|119537216|gb|ABL81833.1| Formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] Length = 268 Score = 95.8 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 92/299 (30%), Gaps = 45/299 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + L P H + G +++ R K+L Sbjct: 1 MPEGDAVWRTAERLRRALDGQRLVRTDLR-------VPQHATTDLSGGTVLETVSRGKHL 53 Query: 61 LIELEGN-------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L + + ++ HL M GS+ + + P H + + ++ Sbjct: 54 LTRINTHSDHGAEDWTLHTHLKMEGSWRVYRAG--ERWTKPAHLARVVLDVGGRSAVGFQ 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + G +DL+ + + + + L ALL+ Sbjct: 112 L--------GVVDLLPREREDEVVGHLG-PDLLGPDWDAEEAVRRLTADPTRPLGEALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+ +AGIG IY E + P + +L + + Sbjct: 163 QRNLAGIGTIYRSELCFLTGYDPRDP-----LAVVADPLRMVRLARSMLDQNRHQAQICT 217 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + D G + VYG++GE CL CG I R ++C CQ Sbjct: 218 T-------GDKRRG---RSLWVYGRSGERCL-RCGTTIVHDQLGQPGRERIAYWCPSCQ 265 >gi|145637015|ref|ZP_01792679.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269873|gb|EDK09812.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 98 Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 K +L+++I++VL +AI GG++L+D++ DG GYF VYG +PC CG Sbjct: 20 KAQCGQLVEQIKQVLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTK 78 Query: 271 IRRIVQAGRSTFYCTYCQK 289 I +V R++FYC CQK Sbjct: 79 IESLVIGQRNSFYCPKCQK 97 >gi|293189765|ref|ZP_06608481.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] gi|292821355|gb|EFF80298.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] Length = 345 Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 98/355 (27%), Gaps = 76/355 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + RF +A G + V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGM---VSASSPQGRFASS---AALLDGWVMQRVRVHGKHM 54 Query: 61 LI---------------------------------ELEGNLSIIVHLGMSGSFIIEHTSC 87 I + + +HLG+ G + Sbjct: 55 FIGFVPPIEGETYEAGVALLEGAAAGSGEPILGEDAPWPDRWVHIHLGLYGWWRFNGDET 114 Query: 88 ------------AKPIKNPQHNHVTISLTNNTNTKKYRVI-------------------- 115 K + H K Sbjct: 115 VVDEGHGVAHRIPNVPKGEWNGHSETRWGEGFGEAKAGEWEPPEPVGAVRLRLFNDHAVA 174 Query: 116 -YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 P R + E L ++ H K + +++Q Sbjct: 175 DLVGPNRCDLITDEERIKAESKLGPDPLDAGARSDAEAMERFAQVAHSKKRAIGEIVMDQ 234 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ + A Sbjct: 235 SIIAGVGNIYRADALFLAGISPHRKGANISIKR---LRELWVLICDLMNRGLAAGRLDTM 291 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY +T PCL CG IR + R F+C CQ+ Sbjct: 292 DPEEAPNPPIEGDEEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|297625920|ref|YP_003687683.1| formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921685|emb|CBL56242.1| Formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 271 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++ R + + + RF +A G ++ K+L + Sbjct: 1 MPEGHVLHRLAARFNELFADEQVQVSSPQGRF---AESAALIDGSTLVQAQAWGKHLFVR 57 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G P V + + + T R Sbjct: 58 FDAPIADPIVHIHLGLIGKLSFTE-------LAPPVGQVRVRINDGTWAADLR------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G S + + LG +P + + + H+ + + L+NQ I AG+ Sbjct: 104 --GPQICRLISEDEEAAATKKLGADPLRSDSDPERAWTKVHRSGKPIASLLMNQAIFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P L + + + ++ +++ + G Sbjct: 162 GNIYRAEVLFRHRIDPQCPGNKLHRASFD------LMWNDLVQLMRLGVRDGRIDTVYPE 215 Query: 241 HIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PCL CG I GR F+C CQ+ Sbjct: 216 HTPEALGRPPRVDAHGGEVYVYRRADQPCL-VCGSPIHETTLEGRHLFWCGRCQR 269 >gi|325526895|gb|EGD04368.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 171 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P + R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + + +H+H+ + + + DPRRFG Sbjct: 61 IDA-GWFIVHLGMTGTLRVLPAAGVPV--AAKHDHIDWIFDE------FVLRFRDPRRFG 111 Query: 124 F--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 E + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 112 AVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRTVSVKQALLAGDIVVGVG 171 >gi|154311839|ref|XP_001555248.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] gi|150850603|gb|EDN25796.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] Length = 381 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 96/297 (32%), Gaps = 44/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + + T+ + F F A GKK+ ++ Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY S + + + K + Sbjct: 61 GKYFW------------------------SKNEDEEEVWPPRFSKFSLQTAGEPKVEAAF 96 Query: 117 NDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D RRF + LV + P + A +L + +KK +K LL Sbjct: 97 TDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQVPIKALLL 156 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L+ A+L P + + + + +L + + A+D Sbjct: 157 DQANISGIGNWVGDEILYNARLHPEQYSNTFTSEE------IKRLHTSMMYICQTAVDLL 210 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + + F++ + K G L N G+ I + GR++ QK Sbjct: 211 ADSSKFPDNWM-----FKHRWGKGKKDGPAALPN-GEKITFLTVGGRTSCVVPSVQK 261 >gi|315655723|ref|ZP_07908621.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315489787|gb|EFU79414.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 342 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 113/355 (31%), Gaps = 79/355 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + VM V RF +A G+++ DV K+L Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAA---SSPQGRF---AAGAAVLNGQRLTDVQAYGKHL 54 Query: 61 LIELEGNL---------------SIIVHLGMSGSFIIEHTS------------------- 86 + + +HLG+ GS+ S Sbjct: 55 FLGFTPRQVETAQTTPDSKSSLTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQ 114 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET---------------- 130 A+ ++ P H H S R + Sbjct: 115 TAEILEIPVHTHHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGP 174 Query: 131 ------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + LGP+P + + + + AL++Q ++AG+GNIY Sbjct: 175 NTCELLDAEGVASVFARLGPDPLRPDCDCGEFVKRCATRQKGIGEALMDQSVIAGVGNIY 234 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD------ 238 E L+ A+L+P R + L ++ +++ L +++G + + Sbjct: 235 RAEVLYAARLNPFTPAREVSMR------KLRRIWDWLEEYLPLGVESGRITTANPDDYAA 288 Query: 239 YVHIDGSIGYFQN----AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V + + G + VY + PCL C ++ + GR ++C CQ+ Sbjct: 289 FVERELAAGREPQAIDSRYYVYQRQDRPCL-RCSTTVKLQIAGGRKLYWCPRCQR 342 >gi|325001208|ref|ZP_08122320.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia sp. P1] Length = 278 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 25/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R ++ + RF G+ + V K+L Sbjct: 1 MPEGHTVHRLARLQRRRYAGR---EVAVSSPQGRFTTGADV---VDGRVLETVEAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + VHLG+ G F + + + P V + + T+ Y D R Sbjct: 55 FQHYGPDTVVHVHLGLWGRF-----ANRRLPEAPPRGQVRMRIVGGTH-------YADLR 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L+ LG +P + + + H+F + + L L++Q ++AG+ Sbjct: 103 GPAACELL--DDVAVKALHDRLGEDPLRDDADPDRVRHRFARSRAPLAALLMDQSVIAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLRDY 239 GN++ E L+R L P+ R L ++ L +++E ++ I+ Sbjct: 161 GNVFRAETLFRTGLDPLTPARDLDDDSFGLLWDDLSAMLREGER--RGRIETLLPEHDPA 218 Query: 240 VHIDGSIGYF-QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + Y +TG PCL CG I R+ F+C CQ Sbjct: 219 LLEPADRGAVCASVVYAYRRTGRPCL-VCGTPIAHREFRARNLFWCPRCQ 267 >gi|269218010|ref|ZP_06161864.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212945|gb|EEZ79285.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] Length = 355 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 87/240 (36%), Gaps = 21/240 (8%) Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 L + +HLG+ G + + ++ HN V + + + + Sbjct: 120 PLWLHIHLGLYGRWHFTGEGSDAIVGAGVRSGNHNAVNVGAGSTVRLRLAANGFTADLTG 179 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 + + + + + ++ S + +L+Q I AG GN Sbjct: 180 PSRCEILDGPGVRAAVSKLGPDPVRNEPGDRERFVEAVRRRRSPVGQLVLDQSIAAGPGN 239 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---------- 232 IY + L+R +SP+R + K + L++ +Q + D + Sbjct: 240 IYRADCLFRVGISPLRPGNKVSAERL--KALWDDLVETMQADVPDGVIRTVPESLRPEPA 297 Query: 233 ---GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ D DG Q F+VY +TG PCL CG + AGR F+C CQ+ Sbjct: 298 EASGAKNPDAEGADGDDPEAQ-RFAVYHRTGRPCL-RCGTPVAEKEMAGRRLFWCPSCQR 355 >gi|225629725|ref|ZP_03787686.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591420|gb|EEH12499.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 117 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 9/122 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQMRNK----HDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RF 122 RF Sbjct: 112 RF 113 >gi|306818563|ref|ZP_07452286.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] gi|304648736|gb|EFM46038.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] Length = 237 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 20/227 (8%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN--------TNTKKYRVIYNDPRR 121 HLGMSG + A I H + +L N V +P Sbjct: 10 WCFHLGMSGQLRL----AAGDITALPHERLRFTLDNGLELVFCDQRTFGHTEVRALEPTT 65 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G + T L + + D + + ++ + +K LL+Q V+GIG Sbjct: 66 DGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIG 125 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YV 240 NIY E L+ A + P R+L + L L++ V+ A++ GG+S YV Sbjct: 126 NIYADETLFAAGVHPATLARNLSGED------LRNLLEVAASVMRHALEFGGTSFDQLYV 179 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ G F + VYG+ G+ C CGQ + +IV GR+T +C +C Sbjct: 180 DSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRATVFCAHC 225 >gi|253702038|ref|YP_003023227.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] gi|251776888|gb|ACT19469.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] Length = 261 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 30/283 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLAVYAENLARKLTGKKIKTVSFHDRGRLNVAPDELSAALTGAKVAAVRRTGKQI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ ++ P V+I+ ++ + + +DP+ Sbjct: 61 SFQADNGAVLRVHLMLTGGFVLTMAEQLDRLEAP---VVSITFSDGS-----ALAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L + L + K + +K LL+Q ++ GI Sbjct: 113 GWATLALNPQPDREAPDALELSADQLQQLC---------AKKPKTLIKALLLDQALIGGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A++SP P + + L + I VL DAI Sbjct: 164 GNAYADEILWEARISPKSAAGK------LPPEAVSALARAIPAVLKDAILEL-----RKR 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G G + + + + T+Y Sbjct: 213 HPDMVAGEYREFLKVH-RPGLKQSPT-GAAVIKENISSKQTYY 253 >gi|296129387|ref|YP_003636637.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulomonas flavigena DSM 20109] gi|296021202|gb|ADG74438.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulomonas flavigena DSM 20109] Length = 272 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 88/302 (29%), Gaps = 48/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + +L + + R +LR+ + G+ ++ K+L Sbjct: 1 MPEGDVLRRTAAHLDRALAGRRLV-----RADLRWPTAA--TVDLVGRTVLGTRPYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY---- 116 L + ++ HL M G++ + S + + ++ YR+ Sbjct: 54 LTRFDDGRTLHTHLRMDGTWRLV-PSTDRRAAARSPEVRAVLASDGWTAVGYRLGMLDVV 112 Query: 117 ------NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 G L P L + + Sbjct: 113 PTSTEGTLLGHLGPDVLDGDFDTTPGVPWAGPPVLDLPVPGIDEALRRWAAQGPRPVAEV 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++V GIG I++ E+L+ P + L++E A Sbjct: 173 LLDQRVVVGIGTIFMAESLFARGWWPWAPADRVTDA-AEVLRAARALLRESVATGRPAS- 230 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTY 286 +VYG+ G C + CG + R R ++C Sbjct: 231 -----------------------AVYGREGRTC-TRCGARVARHDVGAPPTQRQAYWCPG 266 Query: 287 CQ 288 CQ Sbjct: 267 CQ 268 >gi|197117207|ref|YP_002137634.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197086567|gb|ACH37838.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 261 Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 110/283 (38%), Gaps = 30/283 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLTIYAENLARKLTGKKIATVSFHDRGRLNVAPDELSAALIGAKVTAVRRTGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ T ++ P VT++ + + + +DP+ Sbjct: 61 SFQADNGAMLRVHLMLTGGFVLTSTEHLDRLEAP---VVTVTFNDGS-----ALAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L + L + + + +K LL+Q ++ GI Sbjct: 113 GWATLTLNPQPEREAPDALELSADQLQQLC---------AKQPKALIKALLLDQALIGGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A++SP P + + L + I VL DAI Sbjct: 164 GNAYADEILWEARISPKSVAGK------LPPEAVSALARAIPAVLKDAISEL-----RKR 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G G + + + + T+Y Sbjct: 213 HPDMVAGEYREFLKVH-RPGLKQSPT-GAPVIKENISSKQTYY 253 >gi|225388501|ref|ZP_03758225.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] gi|225045432|gb|EEG55678.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] Length = 296 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 94/295 (31%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M E PE+ +I R L VT + K +F P + A G +I Sbjct: 21 MLEYPEIAVISRQLQKETAGKMVTAVLPPMKPHKFCWFNGDPAGYEAQLTGSRITAAEGF 80 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + + + + G++ K P + I L + T +Y Sbjct: 81 GIFVELVFDNGRRLCFNDGVNVRLT-------GGEKPPAACQLLIRLDDGTALAFTVAMY 133 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL-LNQK 175 E P +F A Y A ++ Sbjct: 134 GGIYLHDGSYGDEY------YVKSRAAEPPLSKAFAARYEKALGEAGPKLTAKAFLATEQ 187 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + + L+RA + P R+ S+ + L+ + VL + AGG Sbjct: 188 RFPGIGNGVLQDILFRANIHPRRRLESMSGDEKAG------LLAAVTSVLGEMETAGGRD 241 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEP--CLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G G ++ S K G C CG I + G S +YC CQ Sbjct: 242 TE--KDIYGQPGGYRTIMS---KNGMKSGC-PACGGPIVKAAYLGGSVYYCPACQ 290 >gi|269795617|ref|YP_003315072.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097802|gb|ACZ22238.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 260 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 100/293 (34%), Gaps = 43/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T L NL A G ++ K++ Sbjct: 1 MPEGDTVFLTARRLDEALSGTVLTWAELRWPNLDPT-------ALAGTTVLRSRAYGKHV 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ ++ HL M G++ + T A + + V L N T T V Sbjct: 54 LTTVDSGWTLHTHLRMDGTWRVHRTDPA--ARLARRPTVRAVLANETWTC---VGDRLGM 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E +L P + A L + + + LL+Q ++AG+ Sbjct: 109 MDLVRTRDEHTLLDHLGPDILAPDFGSSPDGLAAVLRTYQAQGARPVGDCLLDQTLMAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G ++ E L+ ++ P +L + + + + + Sbjct: 169 GTLFAAEGLFDRQVWPWTPA-----AEVDLVPLLGSIRRNLLRGVA-------------R 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 +DG + V+ ++G PC CG I R AG R FYC CQ Sbjct: 211 PVDGRV------VHVHSRSGSPC-HRCGTTIVRG-LAGVAPMERPMFYCPVCQ 255 >gi|163841995|ref|YP_001626400.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162955471|gb|ABY24986.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 292 Score = 94.7 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 98/309 (31%), Gaps = 40/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V + + RF +A G+ ++ K L Sbjct: 1 MPEGHTIHRLATQLQDVFAQQKLNAM---SPQGRF---AAGAARIDGEILVAARAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK---------------------PIKNPQHNHV 99 ++ + VHLG+ G++ + + P K P Sbjct: 55 FVQFSNQAILRVHLGLYGAWDFGGDATFRGASSIGAPRRLGERELASEDLPYKGPPEPIG 114 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 + L + + P + E L + Sbjct: 115 AVRLRLVSQHGWADLR--GPSACEVLTAAEARAIQAKLGPDPLNSGQEATLAGEAEFLRR 172 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + L+ Q +VAGIGN+Y E L+RAK++P ++ +L Sbjct: 173 VRSSARPVAVLLMAQNVVAGIGNVYRAELLFRAKINP------MLSGKQLSITKARELWL 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 + +L + G G + VY + G+PC S CG I V AGR Sbjct: 227 DAVVLLNRGVTDGRIIT----TEPGDCDEPADVHYVYKRVGQPCFS-CGTEIAGSVLAGR 281 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 282 NLFFCPSCQ 290 >gi|145296990|ref|YP_001139811.1| hypothetical protein cgR_2889 [Corynebacterium glutamicum R] gi|140846910|dbj|BAF55909.1| hypothetical protein [Corynebacterium glutamicum R] Length = 269 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 108/298 (36%), Gaps = 41/298 (13%) Query: 4 LPEVEIIRRN---LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE +I R L TV D RF +A G +I K+L Sbjct: 1 MPEGHVIHRLAGELTKHF-GETVLDAT--SPQGRFASE---AAIINGHRIAVAEAYGKHL 54 Query: 61 LIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E + +HLG+ G+ E + + + L++ R Sbjct: 55 FVEFDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR---- 103 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + + LG +P + + + + + ++ + L++QK+ Sbjct: 104 -----GPQWCRLITDAERTQAIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLF 158 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+R +SP + + + ++ ++ D + AG Sbjct: 159 AGVGNIYRAETLFRLGISPFTIGKDITTAQF------RSIWADLVGLMKDGVVAGRIDTV 212 Query: 238 DYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 213 RPEHTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CETPIKEQVMEGRNLFWCPGCQR 269 >gi|33322761|gb|AAQ07115.1|AF496427_1 formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. lactis] Length = 101 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 YV E LW+++++P+ L ++ L I + + +A GG+++ +++ + Sbjct: 1 YVDEVLWQSQINPLTPANELTKDQVKC------LHSAINETIEEATKYGGTTVHSFLNAE 54 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 55 GESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 99 >gi|118618996|ref|YP_907328.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571106|gb|ABL05857.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 268 Score = 94.7 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + +F A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVVVSSPQGKFADSAG---AVDGRVLRAASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F S + + +P V + + R G Sbjct: 58 YAGGPVVHVHLGLYGAFTEWVRSAGELLPDPV-GQVRMRMVGAEYGTDLR---------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGP+P + + + K + L++QK++AG+GN+ Sbjct: 108 PTVCEVIDDAQVADVLARLGPDPLRKDADPSWAWARIAKSRRPIGALLMDQKVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + + + + ++ ++ G + H Sbjct: 168 YRSELLFRHRIDPYRSGQRITEAEFSAAWT------DLVALMKVGSRGGKIVVVRPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC CG + V GR+ F+ CQ Sbjct: 222 GAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVLEGRNVFWRPSCQ 267 >gi|302528489|ref|ZP_07280831.1| endonuclease VIII [Streptomyces sp. AA4] gi|302437384|gb|EFL09200.1| endonuclease VIII [Streptomyces sp. AA4] Length = 272 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 95/292 (32%), Gaps = 36/292 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L + T+ L + G+++ V K+L Sbjct: 1 MPEGDTVFLAGKLLDRALAGKTLVRGEFRHPEL-------ATVDLAGREVHGVGTVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G+L++ HL M GS+ I+ AK H V + + Sbjct: 54 FTRFSGDLTLHSHLKMDGSWKIQAAG-AKWAMPAHHARVVLMTEDVQAVGFRLHDLKLLP 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 LV+ P + A+ + K L +ALL+Q+++AG+ Sbjct: 113 TAEEHTLVDHLGPDLLDP-------QWTDEHAALAAANLSAKPERELGDALLDQRVMAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + +SP + + KL+ A + D Sbjct: 166 GNLYKCEISFLLGVSPWTPVSEVDPARAVA--LARKLLVANAWRHEQA------TTGDLR 217 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VY +T + C CG + Q R T+ C CQ Sbjct: 218 RG--------RRTWVYERTRQGCF-RCGGRLLVRQQGDGQYQRPTWCCPRCQ 260 >gi|325963651|ref|YP_004241557.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469738|gb|ADX73423.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 322 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 107/334 (32%), Gaps = 58/334 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V ++ + RF +A G ++ K+L Sbjct: 1 MPEGHSVRRLARQFGDVFGGRRLS---VSSPQGRF---SAGAALLDGHRMTAADAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTK------- 110 + + L + VHLG+ G++ S + I P+ + + Sbjct: 55 FLHFDNALVLHVHLGLYGAWSFGGDSTFTGSSSIGAPRRIGEQETFAAAADDDADGGGDA 114 Query: 111 ----------KYRVIYNDPRRFGFMDLVETSL-----KYQYPPLRTLGPEPADNSFNAIY 155 RV + + T + R + +A Sbjct: 115 GYAGPPAPVGAVRVRLAASNGWADLRGATTCETITAAEADAVLARLGPDPLRNLRGDAGR 174 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + L L++QKI+AG+GN+Y E L+R +L P P+ Sbjct: 175 FAANLQGRKAPLAALLMDQKIIAGVGNVYRAEVLFRRRLDPWLPGSD------VPEPAAR 228 Query: 216 KLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIG------------------YFQNAFSV 255 +L +++ V+ D + G ++ Y G NA V Sbjct: 229 RLWRDVVSVMNDGVSDGRIITTPPKYWSDHGKAAGRAGAARAAALPKSETYPARDNAHFV 288 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G PC C + GR ++C CQ+ Sbjct: 289 YKRDGLPC-RVCRTTVLMSELVGRKLYWCPSCQQ 321 >gi|160881513|ref|YP_001560481.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] gi|160430179|gb|ABX43742.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] Length = 273 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 108/293 (36%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE ++ + + + + + ++ F + P ++ GK I+ Sbjct: 1 MLEIPESIVLSKEINESLVGKVIRYVKANQSPHSFAWYHGNPENYDELLSGKTIVKARPC 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L I+ + + G S + A K P+ N + I +++ ++Y Sbjct: 61 GGMLEIKADDCKIV-FTDGTSIRYY------ADRNKAPKKNQLYIEFEDDSALVVTVMMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 E Y + P + + + +N + K L ++ Sbjct: 114 G---GIWAFAEGEFKNNYYQGAIDKPHPLSEEFDYTYFRSLYTDKCENLSAKAFLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L+ + + P RK +++ + L I+ VL D ++ GG Sbjct: 171 IPGLGNGVLQDILFTSGIHPKRKMKNVEEEEFL------NLFSAIKSVLRDMVEGGGRDT 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I G G + S KT + CGQ IR+ G + ++C CQK Sbjct: 225 E--KDIFGEEGKYLTYLS--RKTYLTPCTKCGQEIRKANYMGGTIYFCENCQK 273 >gi|289209423|ref|YP_003461489.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] gi|288945054|gb|ADC72753.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] Length = 280 Score = 94.3 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 102/297 (34%), Gaps = 37/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + + + H + VS R K+L Sbjct: 1 MPEGDTIHKLARVLGPALAGAPLESVATRARRGAVLVEHGA------MTVRRVSARGKHL 54 Query: 61 LIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 LI LE + HLGM G++ A K + L + RV+ Sbjct: 55 LIALEDAAGRAWRLRTHLGMYGTWHQYAPGAA-WHKPDHQAWAVLRLAD-------RVLV 106 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLN 173 R L+ +GP+ D + + + + + LL+ Sbjct: 107 CFHPRELAWQLLSEGRADPERLDARVGPDLLDATVELDEVVQRIRTNCDPARPILDVLLD 166 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + AGIGNIY E L+ P+ ++ + L + + ++L + G Sbjct: 167 QSLAAGIGNIYKSEVLFLQGRYPLTPVGAITDRD------LLDIYCDSARLLRRNLKPGP 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 R D VYG+ G+ C CG + R + R+T++C CQ Sbjct: 221 RITRARAETD-------EYLHVYGRGGQAC-RTCGTPVERALLGEHLRATYWCPSCQ 269 >gi|300781712|ref|ZP_07091566.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] gi|300533419|gb|EFK54480.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] Length = 282 Score = 93.9 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 95/297 (31%), Gaps = 38/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L M VT L P + G + V K+L Sbjct: 1 MPEGDSVYQLSKRL-QFMTGREVTKCSLR-------VPRFATVDFTGMTVERVWPYGKHL 52 Query: 61 LIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + HL M G++ + ++ K V + L + + Sbjct: 53 FMQFGADGYEPEILHTHLKMEGTWSVHRAG-SRWKKPGHTARVVLQLADAAGDIELV--- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G +D+ + ++ +A + AL++Q Sbjct: 109 --GHSLGLVDVFPAVAYEEEMGYLGPDMLA-EDFDSAEAYRRILAAPEREIGRALMDQYR 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y E + A + P R L + + + + K + + G Sbjct: 166 VAGIGNEYRAEICFLAGVHPARTVGELGEEKVRSIIDISRRLMWTNKEEVKRVSTG---- 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 V G Y V+G+ +PC C +I+ G R ++C CQ Sbjct: 222 ---VKRAGETAY------VFGRNNKPC-RRCATLIKNGFLGGAGDLERVIWWCPTCQ 268 >gi|256832180|ref|YP_003160907.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] gi|256685711|gb|ACV08604.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] Length = 343 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 105/345 (30%), Gaps = 70/345 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V T + + RF +A G +++ K+L Sbjct: 1 MPEGHTVHRLARTFANVFGGHT---VHVTSPQGRF---EQGAALLNGAQLVHAQAYGKHL 54 Query: 61 L-----------------IELEGNLSIIVHLGMSGSFII----------------EHTSC 87 E + VHLG+ GS+ Sbjct: 55 FLGFTPTPNKTNVTHTDEPPPESLRWLRVHLGLYGSWTFAAHPNTPIAHAIGAPRRRIGE 114 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P + T + RV + Y R + Sbjct: 115 REHNLTPDQPEPHDTWTIPEPRGQVRVRIATAHAVADLTGPTACEVLTYEQTRHHINQLG 174 Query: 148 DNSFNAIYLTHQF----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 + +F ++ S + L+NQK +AG+GNIY EAL+RA+LSP + Sbjct: 175 PDPIRDDADPQRFLTAVNRSRSAIGGLLMNQKTIAGVGNIYRAEALFRARLSPYTPGNT- 233 Query: 204 IQNNGTPKDILYKLIQEIQKVLID-----AIDAGGSSLRDYVHIDGSIGYFQNA------ 252 P L L ++ ++ AI S+ R+ + + Sbjct: 234 -----IPTHTLTALWNDLVTLMRQGAHTGAIVTTHSADRNTTPPAPNNPRSRTRQNTDHT 288 Query: 253 ---------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F VY + G+PC CG I R ++C CQ Sbjct: 289 PDAIPTDQAFYVYQRHGQPC-RRCGTPIALADMQARKLYWCPTCQ 332 >gi|331698382|ref|YP_004334621.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] gi|326953071|gb|AEA26768.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] Length = 282 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 89/292 (30%), Gaps = 35/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L + + + R+ G + V+ K+L Sbjct: 1 MPEGDTVHLAGKRLHAALAGNRLVRGEVRHP--RWAEHD-----LAGLVVTGVASVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + S+ H M GS+ + + P+H + T+ + + + Sbjct: 54 FTRFDDGRSLHSHFRMDGSWHLYRPGM--RWRRPEHEARAVLATDERVAVGFALHDLELL 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L D+ A L + + + LL Q+++AG+ Sbjct: 112 ------PTAAEDRLVGHLGPDLLDPAWDDGKAAEALRRFVSRADHEVGLVLLEQRVMAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + +SP R L L+ A S+ Sbjct: 166 GNLYKSEVCFLLGVSPWTPVRDLPDPMAAITLSRKLLLAN-------ADRPEQSTTGSLR 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + V+ + G CL C IR Q R ++C CQ Sbjct: 219 AGEAQ--------WVFERGGRECL-RCRTRIRTADQGDGVYARPAYWCPRCQ 261 >gi|226326882|ref|ZP_03802400.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] gi|225204719|gb|EEG87073.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] Length = 164 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 11/128 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR + + + + LR+ + I+ V RRAKYLL Sbjct: 6 PELPEVETSRRGIEPHLVGNVLHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYLL 64 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +EL II+HLGMSGS I + H+H+ + + + Y DPRR Sbjct: 65 VELNT-GWIIIHLGMSGSVRILLEEQPEEK----HDHIDLVFRDGK-----VLRYTDPRR 114 Query: 122 FGFMDLVE 129 FG E Sbjct: 115 FGAWLWCE 122 >gi|159037002|ref|YP_001536255.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] gi|157915837|gb|ABV97264.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] Length = 270 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 93/298 (31%), Gaps = 43/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L + G + + + R K+L Sbjct: 1 MPEGDMVWNTARVLQQALAGDRLTGSEFRVPRL-------ATTNLAGWTVHESASRGKHL 53 Query: 61 LIE----------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ ++ HL M G++ + P H + L Sbjct: 54 LLRLASPRTDHGGGGERWTLHSHLRMDGTWRTYPPG-RRWSARPAH-LIRAVLRGPRA-- 109 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + LV T+ + + + + + + A Sbjct: 110 -----VAVGYHLHDLALVPTAEEQRLVGHLG-PDLLGPDWDPVEAVRRLTADPEATIGTA 163 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ +AG+GN+Y CE L+ +SP R++ G L + Sbjct: 164 LLDQRSLAGVGNLYKCEVLFLRGVSPWTPVRAVPDLIGVVTLAQRLLAANRGHGTQSSTG 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VYG+ +PC CG IRR Q R T++C CQ Sbjct: 224 SRHR---------------GQTTYVYGRWAQPC-RRCGTPIRRQEQDERVTYWCPTCQ 265 >gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] Length = 390 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 102/299 (34%), Gaps = 41/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV L + T+ + F F A +G+K Sbjct: 1 MPEIAEVARCVHFLRHHLVGRTIAKATAPEDDKVFGKVGTSGPAFEKAVQGRK------- 53 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 G + I ++ + + P++ + T K V + Sbjct: 54 -------YPGWVHIKGDKTAYTNYYKKMKPEEADLWPPKYWKFRLETE---GTPKVEVAF 103 Query: 117 NDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 DPRRFG + LV+ P F Y+ + ++ +K LL Sbjct: 104 TDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSRHVPIKALLL 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L++A + P + + + ++++ V A+D Sbjct: 164 DQTHISGIGNWVADEVLYQANVHPEQYCDDFSDRE------IKAIYEKVRYVCQTAVDKL 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN--CGQMIRRIVQAGRSTFYCTYCQK 289 G S F+ + GK G+ +S G+ + I GR++ Y QK Sbjct: 218 GDS-----DEFPEDWLFKYRW---GKGGKDAVSKLPNGEKLAFITVGGRTSCYAPSRQK 268 >gi|25027478|ref|NP_737532.1| putative endonuclease [Corynebacterium efficiens YS-314] gi|259507116|ref|ZP_05750016.1| endonuclease VIII [Corynebacterium efficiens YS-314] gi|23492760|dbj|BAC17732.1| putative endonuclease [Corynebacterium efficiens YS-314] gi|259165394|gb|EEW49948.1| endonuclease VIII [Corynebacterium efficiens YS-314] Length = 260 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 91/288 (31%), Gaps = 34/288 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ + +LR P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRRL-QFMRGR-----EVLATSLR--VPSVALHDFTGRTVHRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ I + K V + L+ + + Sbjct: 53 FMQ-FGEEILHTHLKMEGTWSIHRKGD-RWRKPGHTARVVLDLSGEETIEVVGHSLGFVK 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F D + A + + + ALL+Q +AG+ Sbjct: 111 VFHISDYPDRVAYLGPD-------VLAPEFDLEQAKANILARPTRPIGEALLDQSNLAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + + +L+ E + I + V Sbjct: 164 GNEYRAEICFLMGVHPATPVALVDIDRTLHLT--RRLMWENRNSPIR--------VTTGV 213 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y V+G+ +PC CG I R ++C CQ Sbjct: 214 RRAGESSY------VFGRNNKPC-RRCGTRIVNAELGDRIIWWCPRCQ 254 >gi|300788119|ref|YP_003768410.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299797633|gb|ADJ48008.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 269 Score = 93.5 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 91/292 (31%), Gaps = 34/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V ++ + M T+ P + G++++DV K+L Sbjct: 1 MPEGDTVFLVAKRFANAMTGKTLLRGEFR-------VPQLATVDLSGREVLDVGTVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 GNL++ HL M G + + AK + H V T + + Sbjct: 54 FTRFSGNLTLHSHLLMDGMWDVYPAG-AKWRRPGHHARVIF-----TAADVQVIGFRVHD 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E L L + + + L ALL+Q ++AG+ Sbjct: 108 LKLVATSKEHDLVAH--LGPDLLDPKWTDEHLKQAIANLTAAPARELGLALLDQHVLAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y CE + ++P + L + R Sbjct: 166 GNLYKCEIAFLLGVTPWTPVSEVDAGRTVALARKLLLANA-------------IAGRFDQ 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRS-TFYCTYCQ 288 G + + VY +T + C CG + Q R T++C Q Sbjct: 213 STTGHLDRNRKN-WVYERTRQGCF-RCGGKLLVRTQGHDVQRRPTWFCPKDQ 262 >gi|289705671|ref|ZP_06502056.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557619|gb|EFD50925.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 303 Score = 93.5 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 98/315 (31%), Gaps = 40/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + RF +A G+ + K+ Sbjct: 1 MPEGHSVHRLARQFTDVFGGRRI---RATSPQGRF---AEGAALLDGQVLERARAHGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNT---------- 107 ++ G + VHLGM G++ A I P+ + Sbjct: 55 FADVSGGRVLHVHLGMYGAWTFGGDQDFVAASSIGAPRRVGEREVHDDGAPAAEPARDAD 114 Query: 108 -------NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGP---EPADNSFNAIYLT 157 R+ + + + N + Sbjct: 115 GWVQPPPAASTVRLRLRSEHGWADLIGASRCRALTPAEAAEVVAGLGPDPLNDDDPAPFY 174 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + + L++Q V+GIGNI+ EAL+RA + P R R + ++ L L Sbjct: 175 AAARRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSASD------LAFL 228 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCG-QMIRR 273 + ++ + + G H G + ++A VY + G CL CG + I Sbjct: 229 WADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACL-VCGRETIVV 287 Query: 274 IVQAGRSTFYCTYCQ 288 A R + C CQ Sbjct: 288 EEMAARKLYRCLTCQ 302 >gi|755066|gb|AAA91094.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti] Length = 70 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFY 283 + DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C C + RIVQAGRSTFY Sbjct: 5 IADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFY 64 Query: 284 CTYCQK 289 C +CQK Sbjct: 65 CPHCQK 70 >gi|145628226|ref|ZP_01784027.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144980001|gb|EDJ89660.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 187 Score = 93.1 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 20/206 (9%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGS + +H+H+ I + N V YNDPRRFG E + Sbjct: 1 MSGSLRVVEKGD----LIDKHDHLDIVVNNGK-----VVRYNDPRRFGAWLWTE--KLNE 49 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +P LGPEP F++ YL + KK + LK L++ +V G+GNIY E L+ L Sbjct: 50 FPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLH 109 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + SL + +L+++I++VL +AI GG++L+D++ DG GYF V Sbjct: 110 PQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFLQPDGHPGYFVQELRV 163 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRST 281 YG +PC CG R+ + R+T Sbjct: 164 YGNKDKPC-PTCGTKNRK--FSDRAT 186 >gi|298345303|ref|YP_003717990.1| putative DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] gi|298235364|gb|ADI66496.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] Length = 342 Score = 93.1 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 106/349 (30%), Gaps = 67/349 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + VM V RF +A G+++ DV K+L Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAA---SSPQGRFT---AGAAVLNGQRLTDVQAYGKHL 54 Query: 61 LI---------------ELEGNLSIIVHLGMSGSFIIEHTS------------------- 86 + + +HLG+ GS+ S Sbjct: 55 FLGFAPRQVDTAQTTPDSKSPPTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQ 114 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET---------------- 130 A+ ++ P H H S R + Sbjct: 115 TAEIVEIPVHTHHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGP 174 Query: 131 ------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 ++ LGP+P + + + + AL++Q ++AG+GNIY Sbjct: 175 NTCELLDVEGVAAVFARLGPDPLRPDCDFSEFVKRCATRQKGIGEALMDQSVIAGVGNIY 234 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYK----LIQEIQKVLIDAIDAGGSSLRDYV 240 E L+ A+L+P R + K L E ++ + D + + Sbjct: 235 RAEVLYAARLNPFTPAREVTSRKLRRIWDWLKEYLPLGVESGRITTASPDDYAVFVEREL 294 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + PCL C ++ + GR ++C CQ+ Sbjct: 295 AAGREPQAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|260579736|ref|ZP_05847595.1| endonuclease VIII [Corynebacterium jeikeium ATCC 43734] gi|258602166|gb|EEW15484.1| endonuclease VIII [Corynebacterium jeikeium ATCC 43734] Length = 281 Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 95/303 (31%), Gaps = 39/303 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TV + P + + G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVRHTDIR-------VPRFATESFDGEEVRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+ I HL M G + I + + + + + + + Sbjct: 53 FMHV-GDRVIHTHLKMEGVWAIHRAGQ-RWRRPGYSARIVLRFSPQHTGGEEIELVGHDL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + E + + + L ALL+QK VAGI Sbjct: 111 GFVRVFNFADYPQAIAHLGPDILAEDWQDGGREEAIGRILQRPERTLGAALLDQKNVAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E ++ + P K + + T L + + + Sbjct: 171 GNEYRAEVMFLVGMHPEVKVGQVGEVGVTKTIDLARRV----------MWDNRLEPHRVF 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---------------TFYCT 285 D G V+G+ G+ C CG I++ GR ++C Sbjct: 221 TGDRRAG---QTNWVFGRAGKAC-RRCGTAIQQSTLGGRWAGGDPDLDSAELERIIWWCP 276 Query: 286 YCQ 288 CQ Sbjct: 277 NCQ 279 >gi|84497372|ref|ZP_00996194.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84382260|gb|EAP98142.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 297 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 104/294 (35%), Gaps = 26/294 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 + E + + ++ + N FD + G+ D K+LL+ Sbjct: 1 MAEGHAVH-GIAQRLQQFVEQPVRSSSPNGEFD-----ATVFDGRVFADAQAVGKHLLVT 54 Query: 64 LEGN-LSIIVHLGMSGSFIIEHT-----SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+ +HL M G+F + + P H +V L + T+ + Sbjct: 55 AHDVGLTAHLHLAMDGAFSVRRHHRALHGDFPRTEPPVHGNVAWRLLSATHHGELT---- 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 LGP+P + + + +++QK++ Sbjct: 111 -----DPAVCELLDEDGVLALRARLGPDPLRDDAEPDVARRRIQNSRRPIGALIIDQKVI 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSS 235 AGIGN+Y E L RA+L P R + + +I + I +A ++ Sbjct: 166 AGIGNVYRAEILHRARLDPFTPGREIDDETFGALWQDTVDLMILGLGAGWIVTDEAQMAA 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-GRSTFYCTYCQ 288 R+ + + + ++VYG+ G PC S CG +R R F+C CQ Sbjct: 226 AREALVRGERVPRWPKRYAVYGRAGTPC-SVCGTTVRAQRVGLQR-LFWCPGCQ 277 >gi|227832624|ref|YP_002834331.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] gi|262182891|ref|ZP_06042312.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] gi|227453640|gb|ACP32393.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] Length = 273 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 100/299 (33%), Gaps = 40/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M+ VT +LR P + + G +V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMEGRRVTS-----SSLR--VPRYATVRFDGLVCEEVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G L + HL M G++ I + + K V + + N + + Sbjct: 53 FMDFGGELILHTHLKMEGTWAIHYAGD-RWRKPGHSARVVLQMENTPRDIELVGHWLGLV 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 E + + P + + + ++ ALL+Q+ VAG+ Sbjct: 112 EVFPSREFEQHMAHLGP---DILAPEWLEGGFEEAVHRIESRPERSIGAALLDQRNVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + I I + LI A + V Sbjct: 169 GNEYRAEVCFLAGVHPATPVALVDVPQ----------ILTISRRLIWANRDSPVRVTTGV 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C CG +I + G R ++C +CQ Sbjct: 219 KRAGETTY------VFGRNRQRC-RRCGTLIEKSTLGGVDAGGDEGELERVIWWCPHCQ 270 >gi|289706075|ref|ZP_06502448.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557277|gb|EFD50595.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 312 Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 109/325 (33%), Gaps = 49/325 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V++ +T L P H +A G + +V RAKYL Sbjct: 1 MPEGDSLVRVAHRLRPVLEGRVLTHADLR-------VPRHATADLTGWTVAEVLPRAKYL 53 Query: 61 LIELEG--------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L L++I HL M G +++ Q V + + + Sbjct: 54 LMRLAPPAARPGARPLTLISHLKMEGRWLVSAVDARWGAPAWQVRAVLETAEHRVLGAQL 113 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 ++ P L P T A LT + + ALL Sbjct: 114 GLLTLVPTADEATVLGHLGPDLLDPAWDTPDDGAALLVEGVRRLTAR---PERPVGLALL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++V+GIGNIY CE L A + P R + G + L++ A A Sbjct: 171 DQRLVSGIGNIYRCETLLLAGIDPHRPIGDVEDVAGLVL-LARDLLRANVPPAAPATGAR 229 Query: 233 GSSL-----------------------RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 + G+ G ++ VYG PCL C Sbjct: 230 RRTTGVRPNPGRPFGVEVLVPAGPPPGTAPGRTPGARGGTP-SYWVYGHDRAPCL-RCRG 287 Query: 270 MIRRIVQAG-----RSTFYCTYCQK 289 +R+ R ++C +CQ+ Sbjct: 288 PVRQEDYGSPEDDARRLWWCPHCQR 312 >gi|302560643|ref|ZP_07312985.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302478261|gb|EFL41354.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 273 Score = 92.3 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 99/293 (33%), Gaps = 28/293 (9%) Query: 4 LPEVEIIRRNLMMVMKNM-TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PE I R T T + + +F T + Sbjct: 1 MPEGHTIHRLAQDYAAAFATGTPLRVTSPQGKFADAAALLDRTPLHTTDAHGKHLFLGFG 60 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E + +HLG+ G P + V + L ++ + Y D R Sbjct: 61 GPEPAEWVHIHLGLFGKVTFGPAPV-----PPPTDTVRLRLAHD-------LSYVDLRGP 108 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 L+ K LGP+P + + + + + L++QK++AG+GN Sbjct: 109 TTCALITDGEKRAV--HDRLGPDPLRPDADPDQAYRRISRSRTTIAALLMDQKVIAGVGN 166 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 +Y E L+R ++ P R R + + + ++ ++ + + H Sbjct: 167 VYRAEVLFRHRVDPYRVGRDITRAQWDG------IWADLVALMREGVRNNRIDTVRPEHT 220 Query: 243 DGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG IR A R+ F+C CQ+ Sbjct: 221 PEAMGRPPRVDDHGGEVYVYRRANLPC-HLCGGEIRTAGLAARNLFWCPACQR 272 >gi|68535516|ref|YP_250221.1| putative endonuclease VIII [Corynebacterium jeikeium K411] gi|68263115|emb|CAI36603.1| putative endonuclease VIII [Corynebacterium jeikeium K411] Length = 281 Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 95/303 (31%), Gaps = 39/303 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TV + P + + G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVRHTDIR-------VPRFATESFDGEEVRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+ I HL M G + I + + + + + + + Sbjct: 53 FMHV-GDRVIHTHLKMEGVWAIHRAGQ-RWRRPGYSARIVLRFSPQHTGGEEIELVGHDL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + E + + + L ALL+QK VAGI Sbjct: 111 GFVRVFNFADYPQVIAHLGPDILAEDWQDGGREEAIGRILQRPERTLGAALLDQKNVAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E ++ + P K + + T L + + + Sbjct: 171 GNEYRAEVMFLVGMHPEVKVGQVGEVGVTKTIDLARRV----------MWDNRLEPHRVF 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---------------TFYCT 285 D G V+G+ G+ C CG I++ GR ++C Sbjct: 221 TGDRRAG---QTNWVFGRAGKAC-RRCGTAIQQSTLGGRWAGGDPDLDSAELERIIWWCP 276 Query: 286 YCQ 288 CQ Sbjct: 277 NCQ 279 >gi|326771864|ref|ZP_08231149.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326637997|gb|EGE38898.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 333 Score = 92.0 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 104/344 (30%), Gaps = 69/344 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + + + RF ++ G+ ++ K+L Sbjct: 1 MPEGHTIHRLAAALDELYGGQ---SLRVRSPQGRF---ADGASRLDGQVLLGSQAHGKHL 54 Query: 61 LI----------ELEGNLSIIVHLGMSGSFIIEHTSC----------------------- 87 + + + +HLG+ G++ + Sbjct: 55 FLPFGPRADMSLDDASVTWLRIHLGLYGAWTFDGDREFTAPHAIGAPRRRVGERGEHALK 114 Query: 88 ----------------AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 A+ H R+ + Sbjct: 115 GGGGSALTGLNGGSLEAEGQGTATHGPAPEEWEPPEPRGAVRLRLLGEHGVADLTGPAAC 174 Query: 132 LKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 R LGP+P + + + ++ L++Q +++G GNIY E Sbjct: 175 ELLDAEGVAAVRRRLGPDPLRADGDVEAFVAKARSRRKSIGELLMDQSVISGAGNIYRAE 234 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+R +SP R + Q L + ++++ ++ + G + D + + Sbjct: 235 TLFRVGVSPFRAGNRISQER------LRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLP 288 Query: 248 YFQN---AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY +TG PCL CG + A R F+C CQ Sbjct: 289 PDDPEAGRWYVYHRTGRPCL-RCGTPVAEREVASRRLFWCPTCQ 331 >gi|325068496|ref|ZP_08127169.1| formamidopyrimidine-DNA glycosylase [Actinomyces oris K20] Length = 169 Score = 92.0 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 3/112 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L + L+ ++ HLGMSG ++ T+ A +H + + +T Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTVATAPDAAPESHRAAAFLADPDT 112 >gi|38234839|ref|NP_940606.1| putative DNA repair glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|38201103|emb|CAE50827.1| Putative DNA repair glycosylase [Corynebacterium diphtheriae] Length = 284 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 105/301 (34%), Gaps = 32/301 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-DICLHRKNLRFDFPHHF---SAATRGKKIIDVSRR 56 MPE + L + T D R L F +A G + Sbjct: 1 MPEGHVIHRFADQLNQHFASTQATPDTQPRRPLLVTSPQGRFVTEAAQLNGHALDHAEAW 60 Query: 57 AKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+L + + +HLG+ GS +E P + I Sbjct: 61 GKHLFLCFDSDNPAHIVHIHLGLIGSMRLED---------PANVWGQIRFRIEDPELPTT 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 R + + LG +P + N + + + + ++ + L++ Sbjct: 112 SAVAANLRGPQWCRL-ITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMD 170 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QK+ AG+GNIY E L+R +SP + + + L + Q+++ ++ + ++ G Sbjct: 171 QKLFAGVGNIYRAETLFRLGISPFILGKDVAE--------LDLIWQDLRFLMREGVNRGR 222 Query: 234 SSLRDYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 H ++G VY + G+PC CG I GR+ F+C C Sbjct: 223 IDTVRPEHTPEAMGRPPRKDDHGGEVYVYRRYGQPCY-VCGTPILECTMEGRNLFWCPTC 281 Query: 288 Q 288 Q Sbjct: 282 Q 282 >gi|126667129|ref|ZP_01738104.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] gi|126628535|gb|EAZ99157.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] Length = 269 Score = 92.0 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 80/258 (31%), Gaps = 23/258 (8%) Query: 39 HHFSAATRGKKIIDVSRRA-----KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN 93 F G+ + V R + + +G + H + G + I Sbjct: 25 KSFEPTLAGRLVTAVEARGKAVLVFFSALADDGPWCVYSHNQLYGQWRISKADAQPKTGR 84 Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 V + K + R D +E + + + + A Sbjct: 85 QLRFAVI------GSNKAAWLYSASDIRLVRPDDLEQVVYLARLGPDPVNQTISVENVLA 138 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + +F + +Q VAG+GN E L+ A L P K + + Sbjct: 139 QFDDKRFRGRGLGGLLL--DQGFVAGVGNYLRSEILFEAGLMPSVKPKDMSSEAR----- 191 Query: 214 LYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGY--FQNAFSVYGKTGEPCLSNCGQM 270 +L + I ++ G + + V G Q F V+ + EPC C Sbjct: 192 -ERLAKAILVLIERTYRLKGITNDPERVKRLKREGRTFSQRRFMVFNRDSEPCYE-CETP 249 Query: 271 IRRIVQAGRSTFYCTYCQ 288 I +I A R +YC CQ Sbjct: 250 IVKISVASRRLYYCPLCQ 267 >gi|19552074|ref|NP_600076.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|62389737|ref|YP_225139.1| endonuclease VIII [Corynebacterium glutamicum ATCC 13032] gi|21323613|dbj|BAB98240.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|41325072|emb|CAF19553.1| ENDONUCLEASE VIII REMOVING OXIDIZED PYRIMIDINES MA [Corynebacterium glutamicum ATCC 13032] Length = 256 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 92/288 (31%), Gaps = 36/288 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ + +LR P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRKL-QFMRGR-----EVLETSLR--VPSVALHDFTGQTVNRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ + + K V + L+ N + + + Sbjct: 53 FMQ-FGEEILHTHLKMEGTWAVHRKGD-RWRKPGHTARVVLVLSENIEVVGHSLGFV--- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 V + +Y A+ + + + ALL+Q +AG+ Sbjct: 108 ------RVFPANRYSEEIAYLGPDVLAEEFDINTARNNIASNPSRTIGEALLDQSNLAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + + K + + + V Sbjct: 162 GNEYRAEICFLMGVHPATQVG-YVDVEKALKITRRLMWENRNS---------PIRVTTGV 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y V+G+ +PC C I + R ++C CQ Sbjct: 212 RRAGESTY------VFGRNNKPC-RRCRTPIVKAELGERIIWWCPRCQ 252 >gi|255010489|ref|ZP_05282615.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313148296|ref|ZP_07810489.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313137063|gb|EFR54423.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] Length = 279 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 102/293 (34%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE ++ L + +TD+ +F + P + GK I + Sbjct: 1 MIEAPEARLLCEQLNKTVCGKRITDVFAQYTPHKFAWFYGKPEECAERLVGKTIDKACPQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + +++ G++ + K P + + ++ + + +Y Sbjct: 61 GGMVELTAGDT-MLVLTDGVNLRYF------EPGAKLPSKHQLLVAFDDESCLLASVRMY 113 Query: 117 NDPRRFGF-MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 F + Y+ + A + + L + + + K L ++ Sbjct: 114 GALLCFTRGHFDAPLAAYYETARTKPQVMSDAFDKEYFLGLVNAPDAQKKSAKAFLATEQ 173 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 + G+GN + + L+ A + P K L K+ +++++ L D GG S Sbjct: 174 TIPGLGNGVLQDILYHAHIHPKTKIDKLGAEEK------EKMYEQVKETLQDIYRLGGRS 227 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G + + S G C CG+ I + G S +YC CQ Sbjct: 228 TET--DLFGVPGQYVASLSK-NTAGHAC-PKCGETIVKENYLGGSIYYCRGCQ 276 >gi|25029390|ref|NP_739444.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|23494678|dbj|BAC19644.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 307 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 109/307 (35%), Gaps = 55/307 (17%) Query: 4 LPEVEIIRR------------NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 +PE +I R L + + RF +++ Sbjct: 35 MPEGHVIHRLAGELTQRFGNSGLGPAL--------DITSPQGRFAREAAIVDQ---SRLL 83 Query: 52 DVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L I+ I +HLG+ G+ E + + + +++ Sbjct: 84 RADAHGKHLFIDFDVDHPEHIIYIHLGLIGTLQFEPAGETR-------GQIRLHISDGAV 136 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R G + + + + LG +P + + + + + ++ Sbjct: 137 AANLR---------GPQWCRLITDEERDIAIGKLGADPIRDDADPEPIRRRVQRSGRSIG 187 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + L++QK+ AG+GNIY E L+R +SP R + T + ++ ++ + Sbjct: 188 SLLMDQKLFAGVGNIYRAETLFRLGISPFTPGREITDAQFTS------IWTDLVGLMKEG 241 Query: 229 IDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + AG + H +G Y +TG+PC CG IR V GR+ F Sbjct: 242 VTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYTYRRTGQPCYL-CGTPIRDQVMEGRNLF 300 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 301 WCPECQR 307 >gi|225023097|ref|ZP_03712289.1| hypothetical protein CORMATOL_03145 [Corynebacterium matruchotii ATCC 33806] gi|224944320|gb|EEG25529.1| hypothetical protein CORMATOL_03145 [Corynebacterium matruchotii ATCC 33806] Length = 273 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 96/298 (32%), Gaps = 39/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + TV + P H + G I V K+L Sbjct: 1 MPEGDSIYQLSRRL-QFLVGRTVLAADIR-------VPRHATVNLAGTTIRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ I HL M G++ I + P H + L + + Sbjct: 53 FMQLDDA-IIHTHLKMEGTWAIHRVGD--RWRRPVHT-ARLILRVADPPHQPIELVGHSL 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + +T ++ + ++ + + + ALL+Q +AGI Sbjct: 109 GFVKIFSAKTYPEHIGHLGPDVLAPDWEHMGEPEAWRRIMLRPDRPVGTALLDQTNLAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + I +LI G+ L Sbjct: 169 GNEYRAEICFIAGIHPQTPVKLCDM--HQVLAIARRLI-------------WGNRLSPLR 213 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----------GRSTFYCTYCQ 288 G + V+G+ G+PC CG +I R ++C CQ Sbjct: 214 VTTGVR-RVGESTYVFGRDGQPC-RRCGTVIVTGTLGGAAGGDEGELERMIWWCPRCQ 269 >gi|239916878|ref|YP_002956436.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414670|ref|ZP_06246412.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838085|gb|ACS29882.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 313 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 107/323 (33%), Gaps = 46/323 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V++ +T L P H +A G + +V RAKYL Sbjct: 1 MPEGDSLVRVAHRLRPVLEGRVLTHADLR-------VPRHATADLTGWTVAEVLPRAKYL 53 Query: 61 LIELEG--------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L L++I HL M G +++ Q V + + + Sbjct: 54 LMRLTPPTARPGARPLTLISHLKMEGRWLVSAVDARWGAPAWQVRAVLETAGHRVLGAQL 113 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 ++ P L P T A A + + + ALL Sbjct: 114 GLLTLVPTADEATVLGHLGPDLLDPAWDTPDDGAAL---LAEGVRRLTARPERPVGLALL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++V+GIGNIY CE L A + P R + G L + A Sbjct: 171 DQRLVSGIGNIYRCETLLLAGIDPHRPVGEVEDVAGLVLLARDLLRANVPPAAPAAGARR 230 Query: 233 GSS--LRDYVHIDG--------------------SIGYFQNAFSVYGKTGEPCLSNCGQM 270 ++ + G + G ++ VYG PCL C Sbjct: 231 RTTGVRPNPGRPFGVEVLVPAGPPPGTTPGRTPGARGGGTPSYWVYGHDRAPCL-RCRGP 289 Query: 271 IRRIVQAG-----RSTFYCTYCQ 288 +R+ R ++C +CQ Sbjct: 290 VRQEDYGSAEDDARRLWWCPHCQ 312 >gi|156060539|ref|XP_001596192.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980] gi|154699816|gb|EDN99554.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980 UF-70] Length = 389 Score = 91.6 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 97/302 (32%), Gaps = 48/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV ++ + T+ + F F A GKK+ D Sbjct: 1 MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKVDD---- 56 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 V SG + S + K + K + Sbjct: 57 --------------YVLAATSGISLRHDGSKDEGEKEVWPPKFSKFSLQTAEEPKVDAAF 102 Query: 117 NDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D RRF + LV+ P + A +L + +KK +K LL Sbjct: 103 TDSRRFSRIRLVDCVAGAIRNTTPLKENGPDPVIDKDILTAEWLEQKLNKKQVPIKALLL 162 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L+RA+L P + + + + +L + + A+D Sbjct: 163 DQANISGIGNWVGDEILYRARLHPEQYSNTFSSEE------IKRLHASMMYICQTAVDLL 216 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGE-----PCLSNCGQMIRRIVQAGRSTFYCTYC 287 S + F + + + G+ P G+ I + GR++ Sbjct: 217 ADSSK-----------FPDDWMFKHRWGKGKKDGPTALPNGEKITFLTVGGRTSCVVPSV 265 Query: 288 QK 289 QK Sbjct: 266 QK 267 >gi|305681748|ref|ZP_07404552.1| formamidopyrimidine-DNA glycosylase N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658221|gb|EFM47724.1| formamidopyrimidine-DNA glycosylase N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 273 Score = 91.2 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 99/298 (33%), Gaps = 39/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + TV + P H + G I V K+L Sbjct: 1 MPEGDSIYQLSRRL-QFLVGRTVLAADIR-------VPRHATVNLAGTTIRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ I HL M G++ I + K + + + + + V Sbjct: 53 FMQLDDA-IIHTHLKMEGTWAIHRVGD-RWRKPAHTARLILRVADPPHQPIELV--GHSL 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + +T L++ + ++ + + + ALL+Q +AGI Sbjct: 109 GFVKIFSAKTYLEHVGHLGPDVLALDWEHMGEPEAWRRIMLRPDRPVGTALLDQTNLAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + + I +LI G+ L Sbjct: 169 GNEYRAEICFIAGIHPQTPVKLCDMHQ--VLAIARRLI-------------WGNRLSPLR 213 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----------GRSTFYCTYCQ 288 G + V+G+ G+PC CG +I R ++C CQ Sbjct: 214 VTTGVR-RVGESTYVFGRDGQPC-RRCGTVIATGTLGGAAGGDEGELERMIWWCPRCQ 269 >gi|313159416|gb|EFR58779.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 276 Score = 91.2 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 103/297 (34%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 M E+PE R ++ TVTD+ +F P + A GK + Sbjct: 1 MLEIPESYSFARQAADMLSGRTVTDVFNATHPHKFTWYLGDPADYRARLVGKTVRAAEGH 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + L+ I + G++ + A + P + I+ +++ +Y Sbjct: 61 GAFIDLLLDDEAHIALSDGVNLRYH------APGAEVPPKYQLLIAFDDDSFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F L P + N + K L ++ Sbjct: 115 GGIIAFRKNFDNPYYLGALSKPSPLDDAFDEACFGRLLSDAK----SNLSAKAFLATEQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L+++ + P RK +L L ++ ++ L D D GG Sbjct: 171 IPGLGNGVLQDILFKSHIHPKRKLATLGDAE------LGRMYSSVKSTLRDMADRGGRDT 224 Query: 237 RDYVHIDGSIGYFQ-----NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ N F+ EPC CG +I + G + +YC CQ Sbjct: 225 E--KDLLGKPGGYKTLLSKNTFA------EPC-PGCGGVIVKEAYLGGAVYYCPVCQ 272 >gi|302876909|ref|YP_003845542.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] gi|307687597|ref|ZP_07630043.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium cellulovorans 743B] gi|302579766|gb|ADL53778.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] Length = 276 Score = 91.2 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 111/296 (37%), Gaps = 28/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M E+PE ++ + V++N + + + +F P+ ++ K I + Sbjct: 1 MLEIPESSVLSTQISEVLRNKKIIGVISNHSPHKFAWFHGDPNEYNKILVDKTIHKATPY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I++E ++ + + A K P + + + ++++ +Y Sbjct: 61 GGMIEIKVESSILLFAD-------GVSLKYNAPNEKLPPKHQLLLKFEDSSSVTASVQMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F + + L + + + K+ L ++ Sbjct: 114 GGIWCFNENSDFKNPYYDIAKDKP-SPLCDEFDKNYFFKLINSPDIQKLSTKSFLATEQR 172 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + LW++KL P RK SL + L I+KVL++ ++ G Sbjct: 173 IPGLGNGVLQDILWQSKLHPKRKINSLATGDK------ELLFINIKKVLLEMVELNGRDT 226 Query: 237 RDYVHIDGSIGYFQNAFS---VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G ++ S V G C +C ++I + G S ++C CQK Sbjct: 227 E--KDLFGNNGGYKTRMSKNTV----GSSC-PSCDEIIEKANYLGGSIYFCPNCQK 275 >gi|298384152|ref|ZP_06993713.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 1_1_14] gi|298263756|gb|EFI06619.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 1_1_14] Length = 279 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 102/293 (34%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 M E PE + L +K +T++ +F P ++ GK I + Sbjct: 1 MIEAPEALYLCEQLNKTVKGKRITNVFTLFTPHKFAWFSESPDEYAEWLTGKTIDHARSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + G+ +I+ G++ + A K P + + I + + +Y Sbjct: 61 GGMVEM-TIGDKMLILTDGVNLRYY------APGTKLPAKHQLLIGFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + +Y A + + L + + + K L ++ Sbjct: 114 GGIMCYSKDAANGVLSEYYRTAKSKPQVMSDAFSKKYFLGLINDESAQKKSAKAFLATEQ 173 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GN + + L+ A + P +K +L L ++++ + D GG + Sbjct: 174 TVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYLQGGRN 227 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 228 TES--DLFGENGKYTACLSK-DTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|258652633|ref|YP_003201789.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] gi|258555858|gb|ACV78800.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] Length = 282 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 97/291 (33%), Gaps = 25/291 (8%) Query: 4 LPEVEIIRR---NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE + R + V RF + G + K L Sbjct: 1 MPEGHVTHRLAIGFTERLAGAPVRS---TSPQGRF---AEEAGEVDGHLLDAAEAYGKNL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G+ ++ VHLG++G + P + + N Y D R Sbjct: 55 FVH-FGDRAVHVHLGLAGKLAFVGDDGGGAAR-PITGAIRWRVENERG-------YADLR 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 LV+ + P+P + + + + + L++Q+I AG+ Sbjct: 106 GPQACKLVDDAGIRSITDPLG--PDPLREDADPEVGWARVRRSATPIGLLLMDQRISAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ E L+R ++ P+ + R L + L+ + + D V Sbjct: 164 GNIFRAEVLYRHRIDPMMQGRLLRRKEWDAIWT--DLVGLMHDAVRKGRIDTVRPEHDPV 221 Query: 241 HIDGSI--GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + + CL C +R GR+ F+C CQ+ Sbjct: 222 AMGRAPRVDRHGGEVYVYRRADQACL-VCATPVRTTTLGGRNLFWCPSCQR 271 >gi|256425446|ref|YP_003126099.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] gi|256040354|gb|ACU63898.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] Length = 259 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 96/283 (33%), Gaps = 32/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ NL + + I L D P F A G+ + V R K L Sbjct: 1 MPELPDLQVFSHNLDKALSGKKLKVIKLENTKKAKDTPAAFKKALEGETLESVYREGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HL + G +H + + + Sbjct: 61 RFRFKNEAVLGMHLMLHGKLYYFEEENTN-----KHTVIALLFEDGKGL----------- 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P P+ F +L Q KK + +K LL+Q I+ GI Sbjct: 105 ---ALTDFQGAAVPSLNPEAAAAPDALSKEFTLTFLKEQLAKKKTAVKKILLDQHIIRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A +SP P + L I VL +A Sbjct: 162 GNAYADEILWEAGISPFSIANK------IPATKVKALHAAIHNVLKEAEKQI-----RKE 210 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ ++ + S G +I + R T+Y Sbjct: 211 HPDIIAGEIRDFMKIH--QPKKTHSPTGGVIEQQELNSRKTYY 251 >gi|171682424|ref|XP_001906155.1| hypothetical protein [Podospora anserina S mat+] gi|170941171|emb|CAP66821.1| unnamed protein product [Podospora anserina S mat+] Length = 314 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 111/308 (36%), Gaps = 36/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + T+ + F SAA G+K+I + Sbjct: 1 MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF-----------IIEHTSCAKPIKNPQHNHVTISLTN 105 K + L+ +++H GM+G + T P++ ++ Sbjct: 61 GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQTSYSSLYRDTDTRVETWPPKYTKFHLT--- 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFH 161 T V + D RR + LV+ + P + F Y + Sbjct: 118 TTCNPAVEVAFTDYRRLARVRLVDCPGAHIRSHAPLKENGPDPVQDTDRFTLAYFQSKCR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + +K LLNQK ++GIGN E L+++++ P +K L L + I Sbjct: 178 ASRAAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQKCNHLTDAQT------KTLYEVI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + V A+ G DY S F+ +S K E G+ + + R++ Sbjct: 232 RYVCQTAVGVLG----DYHQFP-SDWLFKYRWS---KGSENPTLPGGEPLAHVTVGNRTS 283 Query: 282 FYCTYCQK 289 Y T QK Sbjct: 284 CYATRLQK 291 >gi|259508429|ref|ZP_05751329.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259163983|gb|EEW48537.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 273 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 109/307 (35%), Gaps = 55/307 (17%) Query: 4 LPEVEIIRR------------NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 +PE +I R L + + RF +++ Sbjct: 1 MPEGHVIHRLAGELTQRFGNSGLGPAL--------DITSPQGRFAREAAIVDQ---SRLL 49 Query: 52 DVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L I+ I +HLG+ G+ E + + + +++ Sbjct: 50 RADAHGKHLFIDFDVDHPEHIIYIHLGLIGTLQFEPAGETR-------GQIRLHISDGAV 102 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R G + + + + LG +P + + + + + ++ Sbjct: 103 AANLR---------GPQWCRLITDEERDIAIGKLGADPIRDDADPEPIRRRVQRSGRSIG 153 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + L++QK+ AG+GNIY E L+R +SP R + T + ++ ++ + Sbjct: 154 SLLMDQKLFAGVGNIYRAETLFRLGISPFTPGREITDAQFTS------IWTDLVGLMKEG 207 Query: 229 IDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + AG + H +G Y +TG+PC CG IR V GR+ F Sbjct: 208 VTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYTYRRTGQPCYL-CGTPIRDQVMEGRNLF 266 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 267 WCPECQR 273 >gi|227875301|ref|ZP_03993443.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] gi|227844206|gb|EEJ54373.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] Length = 222 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 8/190 (4%) Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + + + V +P G + T L + + D + + ++ Sbjct: 28 LELVFCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVS 87 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +K LL+Q V+GIGNIY E L+ A + P ++L + L L+ Sbjct: 88 RLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGED------LRNLL 141 Query: 219 QEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + V+ A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV Sbjct: 142 EVAASVMRHALEFGGTSFDQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLD 200 Query: 278 GRSTFYCTYC 287 GR+T +C +C Sbjct: 201 GRATVFCAHC 210 >gi|294632524|ref|ZP_06711084.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292835857|gb|EFF94206.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 269 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 18/258 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L + + + + L+ P A G ++ V R K+ Sbjct: 29 MPELPEVEALKDFLTENLVGHEIVRVLPVAVSVLKTYDPP--VTALEGHEVTAVRRHGKF 86 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +E G ++ HL G ++ P + + + T + + Sbjct: 87 LDLETGGGPHLVTHLA-RGGWLQWRDRLPDGPPRPGKGPLALRVALETGA-GFDLTEAGT 144 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V + P + LGP+P + F+ + +K AL +Q ++AG Sbjct: 145 QKRLAVYVVR--DPREVPGVARLGPDPLADDFDEERFARLLAGERRQIKGALRDQGLIAG 202 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L A++SP ++T +L + L ++ L +A++ Sbjct: 203 VGNAYSDEILHAARMSPFKRTAALTDEE------IAGLYAALRTTLTEAVERSRGVAAGR 256 Query: 240 VHIDGSIGYFQNAFSVYG 257 + + G V+G Sbjct: 257 LKAEKKSG-----LRVHG 269 >gi|290960360|ref|YP_003491542.1| DNA repair hydrolase [Streptomyces scabiei 87.22] gi|260649886|emb|CBG73002.1| putative DNA repair hydrolase [Streptomyces scabiei 87.22] Length = 274 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 29/294 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE I R + + + +F +A G + K+L Sbjct: 1 MPEGHTIHRLAEDCLAHFGGDGRPTHVTSPQGKF---ADAAALLTGTPLHTAEAHGKHLF 57 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + G + + P + V + L ++T+ R Sbjct: 58 LHFGDPDAEERVHIHLG--LFGKVTFGPAPAPPPTDTVRLRLRDDTSYMDLR-------- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G + + LGP+P + + + + + LL+QK++AG+G Sbjct: 108 -GPTTCALITEAEKRAVHARLGPDPLRADADPARAYARVSRSRTTIAALLLDQKVIAGVG 166 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N+Y E L+R + P R + + + ++ ++ + + H Sbjct: 167 NVYRAEVLFRHGIDPYRAGKDITPAEWD------AIWTDLVGLMREGVRHNRIDTVRPEH 220 Query: 242 IDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + PC CG +R A R+ F+C CQ+ Sbjct: 221 TPEAMGRPPRVDDHGGEVYVYRRAALPC-HLCGGEVRTADLAARNLFWCPACQQ 273 >gi|145295018|ref|YP_001137839.1| hypothetical protein cgR_0962 [Corynebacterium glutamicum R] gi|140844938|dbj|BAF53937.1| hypothetical protein [Corynebacterium glutamicum R] Length = 256 Score = 90.8 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 92/288 (31%), Gaps = 36/288 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ + +LR P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRKL-QFMRGR-----EVLETSLR--VPSVALHDFTGQTVNRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ + + K V + L+ N + + + Sbjct: 53 FMQ-FGEEILHTHLKMEGTWAVHRKGD-RWRKPGHTARVVLVLSENIEVVGHSLGFV--- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 V + +Y A+ + + + ALL+Q +AG+ Sbjct: 108 ------RVFPANRYSEEIAYLGPDVLAEEFDINTARNNIASNPSRTIGEALLDQSNLAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + + K + + + V Sbjct: 162 GNEYRAEICFLMGVHPATQVG-YVDVEKALKITRRLMWENRNS---------PIRVTTGV 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y V+G+ +PC C I + R ++C CQ Sbjct: 212 RRAGESTY------VFGRNKKPC-RRCRTPIVKAELGERIIWWCPRCQ 252 >gi|304390860|ref|ZP_07372812.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325743|gb|EFL92989.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 342 Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 106/349 (30%), Gaps = 67/349 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + VM V RF +A G+++ DV K+L Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAA---SSPQGRFT---AGAAVLNGQRLTDVQAYGKHL 54 Query: 61 LIELEGNL---------------SIIVHLGMSGSFIIEHTS------------------- 86 + + +HLG+ GS+ S Sbjct: 55 FLGFAPRQVDTAQTTPDSKSSLTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQ 114 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET---------------- 130 A+ ++ P H H S+ R + Sbjct: 115 TAEIVEIPVHTHHDDSVFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGP 174 Query: 131 ------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 ++ LGP+P N + + + AL++Q ++AG+GNIY Sbjct: 175 NTCELLDVEGVAAVFARLGPDPLRPDCNCGEFVKRCATRQKGIGEALMDQSVIAGVGNIY 234 Query: 185 VCEALWRAKLSPIRKTRSLIQNN----GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 E L+ A+L P R + + L E ++ + D + + Sbjct: 235 RAEVLYAARLDPFTPAREVSSRKLRRIWDWLEEYLPLGVESGRITTTSPDDYAVFVEREL 294 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + PCL C ++ + GR ++C CQ+ Sbjct: 295 AAGREPRAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|145642431|ref|ZP_01797986.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145272869|gb|EDK12760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 66 Score = 90.4 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L +AI GG++L+D++ DG GYF VYG +PC CG I +V R++FY Sbjct: 1 MLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFY 59 Query: 284 CTYCQK 289 C CQK Sbjct: 60 CPKCQK 65 >gi|153809576|ref|ZP_01962244.1| hypothetical protein BACCAC_03894 [Bacteroides caccae ATCC 43185] gi|149127779|gb|EDM19003.1| hypothetical protein BACCAC_03894 [Bacteroides caccae ATCC 43185] Length = 281 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 105/295 (35%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M E PE I+ R L ++ +TD+ +F ++ GK I + Sbjct: 1 MIEAPEARILCRQLNETVRGKKITDVYTQFSPHKFAWFTGSSEEYAEQLSGKTIDHAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I G+ +I+ G++ ++ A K P + + I+ + + +Y Sbjct: 61 GGMVEI-TIGDKVLILTDGVNLRYL------APGSKLPAKHQLLIAFEDESCLVASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHKKNSNLKNALLN 173 + + Y P+ + F+ Y + + + K L Sbjct: 114 GGLMCYD--KDAADGVLSNYYLTARSKPQVMSDGFSPEYFLGLINADSAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + + L+ + P +K L L +I++ + D GG Sbjct: 172 EQTIPGLGNGVLQDILYHTHIHPKKKISGLTDKER------ENLFYQIKETMNDIYHLGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S + G+ G + S G C CG+ I + G S +YC CQ Sbjct: 226 RSTES--DLFGANGKYVACLSK-DTAGMAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|302771624|ref|XP_002969230.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] gi|300162706|gb|EFJ29318.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] Length = 268 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 26/275 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + K + + + + P K+I+ R+ K Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L +EL+ SI GM+G+ ++ K +++ + S + + Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L++ PP+ LGP+ + KK + +K LL+Q Sbjct: 120 SFTDKRRFARVRLIQ--DPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQ 177 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AGIGN E L+++++ P + + L + L AI Sbjct: 178 SFIAGIGNWIADEVLYQSRIHPEQPAST--------------LTAIDCERLRGAIKEVVM 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 + D +D + F + + + G+ S G+ Sbjct: 224 TAVD---VDADLERFPRDWLFHHRWGKKPGSVNGE 255 >gi|330944162|gb|EGH46279.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 58 Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAK Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAK 58 >gi|83816661|ref|YP_444607.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] gi|83758055|gb|ABC46168.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] Length = 265 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELP+ + RR L + + D + + D PH RG+ + D R K Sbjct: 1 MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLEPHRLGEVLRGRTLTDTHRHGK 60 Query: 59 YLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + E + +H GM+G + P++ +V + + + + Sbjct: 61 HVFVRYGEETGWLALHFGMTGRVQVVPDGT-----MPEYAYVQVHFEDG-----GALAFE 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 PR+F + LV+T + AD + +K LL+Q +V Sbjct: 111 CPRKFARVRLVDTPDAFVEAKDLGPDARRADVDAFLAPFASR----RGAIKGRLLDQSVV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL++ + P L + + L L IQ+VL AI Sbjct: 167 AGLGNIYADEALYQEGIHPRTTVPELSETD------LRGLYDAIQRVLDAAIAVDA---- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D +D + F + + G+ G + +GR+ ++ Q Sbjct: 217 DPEALD------PDRFMLPHRYGDEHCPKTGVPLDTETVSGRTAYFSPTRQ 261 >gi|254574788|pdb|3A45|A Chain A, Crystal Structure Of Mvnei1_2 gi|254574789|pdb|3A45|B Chain B, Crystal Structure Of Mvnei1_2 gi|254574790|pdb|3A46|A Chain A, Crystal Structure Of Mvnei1THF COMPLEX gi|254574791|pdb|3A46|B Chain B, Crystal Structure Of Mvnei1THF COMPLEX Length = 289 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 97/303 (32%), Gaps = 30/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG--KKIIDVSRRAK 58 MPE PEV + L K T+ I P + K+ +V + K Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVSNVDTKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L EL S + I +T + + L+ + Y ++ Sbjct: 61 FLWFELFD------PNDKSNKWYIWNTFGLTGMWSLFEAKYTRAVLSFDNELMAY---FS 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + I ++ K + + +KI Sbjct: 112 DMRNFGTFKFSNSEKELKRKL---NELGPDFLKNDDIDISKIKKYKQPIVALLMDQKKIG 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAG 232 +G+GN V E L+RAK+ P + +L K + ++ Sbjct: 169 SGLGNYLVAEILYRAKIDPHKLGSNLTDQEIENLWYWIKYETKLAYDSNHIGYMVNLENE 228 Query: 233 GSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTY 286 S + R H + + F VY K +P G + R+T++ Sbjct: 229 SSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSGKNKRTTYWAPA 284 Query: 287 CQK 289 QK Sbjct: 285 IQK 287 >gi|254574787|pdb|3A42|A Chain A, Crystal Structure Of Mvnei1 Length = 295 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 97/303 (32%), Gaps = 30/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG--KKIIDVSRRAK 58 MPE PEV + L K T+ I P + K+ +V + K Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVSNVDTKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L EL S + I +T + + L+ + Y ++ Sbjct: 61 FLWFELFD------PNDKSNKWYIWNTFGLTGMWSLFEAKYTRAVLSFDNELMAY---FS 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + I ++ K + + +KI Sbjct: 112 DMRNFGTFKFSNSEKELKRKL---NELGPDFLKNDDIDISKIKKYKQPIVALLMDQKKIG 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAG 232 +G+GN V E L+RAK+ P + +L K + ++ Sbjct: 169 SGLGNYLVAEILYRAKIDPHKLGSNLTDQEIENLWYWIKYETKLAYDSNHIGYMVNLENE 228 Query: 233 GSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTY 286 S + R H + + F VY K +P G + R+T++ Sbjct: 229 SSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSGKNKRTTYWAPA 284 Query: 287 CQK 289 QK Sbjct: 285 IQK 287 >gi|311977698|ref|YP_003986818.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|76363876|sp|Q5UQ00|FPG_MIMIV RecName: Full=Probable formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; Short=AP lyase gi|55416935|gb|AAV50585.1| formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|308204334|gb|ADO18135.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] Length = 287 Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 97/303 (32%), Gaps = 30/303 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG--KKIIDVSRRAK 58 MPE PEV + L K T+ I P + K+ +V + K Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVSNVDTKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L EL S + I +T + + L+ + Y ++ Sbjct: 61 FLWFELFD------PNDKSNKWYIWNTFGLTGMWSLFEAKYTRAVLSFDNELMAY---FS 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + I ++ K + + +KI Sbjct: 112 DMRNFGTFKFSNSEKELKRKL---NELGPDFLKNDDIDISKIKKYKQPIVALLMDQKKIG 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAG 232 +G+GN V E L+RAK+ P + +L K + ++ Sbjct: 169 SGLGNYLVAEILYRAKIDPHKLGSNLTDQEIENLWYWIKYETKLAYDSNHIGYMVNLENE 228 Query: 233 GSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTY 286 S + R H + + F VY K +P G + R+T++ Sbjct: 229 SSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSGKNKRTTYWAPA 284 Query: 287 CQK 289 QK Sbjct: 285 IQK 287 >gi|213864695|ref|ZP_03386814.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 69 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC C Sbjct: 9 SIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQC 67 Query: 288 QK 289 QK Sbjct: 68 QK 69 >gi|321264442|ref|XP_003196938.1| hypothetical protein CGB_L0290C [Cryptococcus gattii WM276] gi|317463416|gb|ADV25151.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 478 Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 111/324 (34%), Gaps = 36/324 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + + F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDRIIFTGGTDHNEFAKEISGRTITGCERKG 60 Query: 58 -KYLLIELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + + ++H GM+G ++ + + P+ + L Sbjct: 61 KMFWITLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESVDVWPPRFYKFVLRLEPQK 120 Query: 108 NTKK---YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + D RR G + LV + YPP+ LG +P + T K Sbjct: 121 GSIGDEPRELAFIDGRRLGRLRLV-SDPVSSYPPVSELGFDPVLSHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KDILYKLIQEIQK 223 +K +++Q AG+GN E L++A++ P +L + N L + Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIKDLHHQLRAVPLTAIS 239 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNA--------FSVYGKTGEPCLSNCGQ------ 269 V D+ L + G+ Q + G+ GE + Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKTKGKKFIDGEGGEDVEPEDKEFLELPD 299 Query: 270 ----MIRRIVQAGRSTFYCTYCQK 289 I+ I GR+T QK Sbjct: 300 GSPATIKFIEVGGRTTALVEELQK 323 >gi|3850130|emb|CAA21931.1| hypothetical protein [Candida albicans] Length = 372 Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 109/368 (29%), Gaps = 92/368 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----------FSAATRGKKI 50 MPE+ EV + L + +T + L L F A + Sbjct: 1 MPEVAEVSHVCALLKRNILGFRITKVNLLHDPLLFPVLKDTNNAEKELNKMRKALTNAVV 60 Query: 51 IDVSRRAKYLLIELEGNLSII---VHLGMSG---------------------------SF 80 V R KY I L + + +H GM+G F Sbjct: 61 TSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMVKLRNVHSHLAFMENGGDKKALEKLERF 120 Query: 81 IIEHTSCA-----KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF----------- 124 + + K P+ + L NN KK ++DPRR Sbjct: 121 RYKDSRIKPDVEVKQEWPPRFTKFDMELENND--KKLEFAFSDPRRLARVRLLSGLEVST 178 Query: 125 ------------------MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 V + + + K Sbjct: 179 DESLLKLSPLDALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALILSKKKP 238 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVL 225 +K+ LL+Q AG+GN E L++A + P S I + ++ +L + V Sbjct: 239 IKSLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDSLIYVC 298 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRST 281 +A+ ++G + F + + + + G E + G ++ I GR++ Sbjct: 299 EEAV-----------RVEGDVAKFPDDWLMLHRWGKGRKEKRKTPNGYILDHITVGGRTS 347 Query: 282 FYCTYCQK 289 YC Q+ Sbjct: 348 CYCPELQR 355 >gi|315656363|ref|ZP_07909252.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492922|gb|EFU82524.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 342 Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 111/355 (31%), Gaps = 79/355 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + VM V RF +A G+++ +V K+L Sbjct: 1 MPEGHAIHRLVAQFAQVMSGEVVAA---SSPQGRFT---AGAAVLNGQRLTNVQAYGKHL 54 Query: 61 LIELEGNL---------------SIIVHLGMSGSFIIEHTS------------------- 86 + + +HLG+ GS+ S Sbjct: 55 FLGFAPRQVDTAQTTPDSKSPLTWLHIHLGIYGSWRFYGDSEFTSRHVGIALNLPESTQQ 114 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET---------------- 130 A+ + P H S R + Sbjct: 115 TAEIAEIPVHTEHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGP 174 Query: 131 ------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 ++ LGP+P + + + + ALL+Q ++AG+GNIY Sbjct: 175 NTCELLDVEGVAAVFARLGPDPLRPDCDCGEFVKRCATRQKGIGEALLDQSVIAGVGNIY 234 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD------ 238 E L+ A+L+P R + L ++ +++ L +++G + Sbjct: 235 RAEVLYAARLNPFTPAREVSSR------KLRRIWDWLEEYLPLGVESGRITTASPDDYAV 288 Query: 239 YVHIDGSIGYFQN----AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V + + G + VY + PCL C ++ + GR ++C CQ+ Sbjct: 289 FVERELAAGREPQAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|322418248|ref|YP_004197471.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] gi|320124635|gb|ADW12195.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] Length = 261 Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 30/283 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + V + H++ S A G ++ V R K + Sbjct: 1 MPELPDLTVYAENLGKALTGKKVDRVEYHQRGKLNVSAAELSRALAGAEVTGVQRGGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + VHL ++G F++ S + QH +T++ ++ + + D + Sbjct: 61 AFHFGNGALLRVHLMLTGGFVLTSPSALDRL---QHPVLTVAFSDGS-----ALALTDEK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L K L + K + +K LL+Q ++ GI Sbjct: 113 GWASVALNPGEEKDAPDALALSAEQLQQLC---------QRKPRTLIKPLLLDQALIGGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A++SP P + + L I VL DAI + Sbjct: 164 GNAYADEILWAARISPKSPAGK------LPPEAVKALADAIPAVLKDAI-----TELRKR 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G I + + T+Y Sbjct: 213 HPDMVSGEYREFLKVH-RPELKVSPT-GAKIIKENVQSKRTYY 253 >gi|54022944|ref|YP_117186.1| putative endonuclease VIII [Nocardia farcinica IFM 10152] gi|54014452|dbj|BAD55822.1| putative endonuclease VIII [Nocardia farcinica IFM 10152] Length = 259 Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 93/301 (30%), Gaps = 59/301 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + T+ P + + G+++ +V+ K+L Sbjct: 1 MPEGDTVFRAAHRLHLALAGKTLVRSDFR-------VPRYATVDLVGERVEEVTSYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I I HL M G + + + V ++ + R Sbjct: 54 FIRTADAS-IHTHLKMEGVWRTYCVG-ERWTRPRVQARVVLTTDDTEAVGFALGKVEVLR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R +++ + A + ALL+Q+ +AGI Sbjct: 112 RADEHTVIDHLGPD----------LLGPDWDPAEAERRLASVPERPIGLALLDQRNLAGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + ++ P A+ + + + Sbjct: 162 GNIYRSEICFLRRVHPATPVA--------------------------AVPDLPAVVSEAH 195 Query: 241 HIDGSIGY-FQNAFSVYGKTGEPCLSNCGQMIR------------RIVQAGRSTFYCTYC 287 + G+ + VYG+TG PC CG I+ RIVQ R F+C C Sbjct: 196 RVLGAAAHQPPWRPMVYGRTGLPC-RRCGTRIQARPLGEPTPVSDRIVQRERGIFFCPRC 254 Query: 288 Q 288 Q Sbjct: 255 Q 255 >gi|302754324|ref|XP_002960586.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] gi|300171525|gb|EFJ38125.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] Length = 268 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 26/275 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + K + + + + P K+I+ R+ K Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----SLTNNTNTKKYRV 114 L +EL+ SI GM+G+ ++ K +++ + S + + Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L++ PP+ LGP+ + KK + +K LL+Q Sbjct: 120 SFTDKRRFARVRLLQ--DPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQ 177 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AGIGN E L+++++ P + + L + L AI Sbjct: 178 VFIAGIGNWIADEVLYQSRIHPEQPAST--------------LTAIDCERLRGAIKEVVM 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 + D +D + F + + + G+ S G+ Sbjct: 224 TAVD---VDADLERFPRDWLFHHRWGKKPGSVNGE 255 >gi|309811321|ref|ZP_07705108.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434628|gb|EFP58473.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 304 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 107/300 (35%), Gaps = 35/300 (11%) Query: 1 MPELPEV-EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE V R L + +T L L + G++ + V K+ Sbjct: 1 MPEGDTVMWAAAR-LNRALLGQRLTRTDLRTPRL-------ATVDLSGRECLPVVTHGKH 52 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI---- 115 +L LEG ++I H M G + + + + +T + + Sbjct: 53 MLHRLEGGVTIHSHFKMEGRWSLLPAPSTLQGRAAAGAEADVRRAVTAHTTRALLYTPRT 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLG--PEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + G +D++ET+ + + D L + + + ALL+ Sbjct: 113 LAVGSKLGVLDVLETARECDVVGHLGPDLLADDWDGGGRGRALDNLRAQPERPVGEALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++VAG+G ++ E LW ++ P + ++ +++ + + G Sbjct: 173 QRLVAGLGTFWISEMLWVHRILPWTQLAAMPDG----------VLEAVLDDARRLMLVSG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 + D G Q+ V+ ++G CL C I R+ AG R+ F C CQ Sbjct: 223 RTGVQSSTGDARAG--QDR-YVHARSGMACL-RCNDTI-RVAMAGDPGRERTLFSCPTCQ 277 >gi|164604791|gb|ABY61957.1| putative formamidopyrimidine-DNA-glycosylase [Haemophilus influenzae] Length = 65 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + I GG++L+D++ DG GYF VYG +PC CG I +V R++FYC Sbjct: 3 NGIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPK 61 Query: 287 CQK 289 CQK Sbjct: 62 CQK 64 >gi|314923839|gb|EFS87670.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL001PA1] gi|314966148|gb|EFT10247.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL082PA2] gi|314982012|gb|EFT26105.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA3] gi|315090827|gb|EFT62803.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA4] gi|315095039|gb|EFT67015.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL060PA1] gi|315104377|gb|EFT76353.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL050PA2] gi|327328183|gb|EGE69952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 235 Score = 89.3 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 14/245 (5%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G + K+L+++ + + + G A P V + +T Sbjct: 2 LDGTVLTSAQAWGKHLVVDFDNHRPDHLLHIHLGLI----GKLAVGPTVPVVGQVRLRIT 57 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + R P+ ++ E T+GP+P + ++ + + + Sbjct: 58 DGVTAADLR----GPQTCELINDDEWGTVAA-----TIGPDPIRDDADSDVAWDKVRRSS 108 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + + LL+Q++ AG+GNIY E L+R ++ P + + + ++ Sbjct: 109 RRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVE 168 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + + + VY + +PCL C +R + Q GR F+C Sbjct: 169 SGRIDTVQPEHTPEAMGRPPRVDRHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWC 227 Query: 285 TYCQK 289 CQ+ Sbjct: 228 PRCQR 232 >gi|302331706|gb|ADL21900.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308277398|gb|ADO27297.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 281 Score = 88.9 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 107/297 (36%), Gaps = 40/297 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF A K+L Sbjct: 13 MPEGHVIHRLARELNKHFQGK---APRVTSPQGRFAAEAALIHA---APFYQAHAWGKHL 66 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 IE + + +HLG+ GS + AK + + + + R Sbjct: 67 FIEFDAPTPERIVHIHLGLIGSLHFDPIEEAK-------GQIRLRIEGDKVAANLR---- 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + + LG +P + + + + ++ + L++Q++ Sbjct: 116 -----GPQWCRLITTEEMEVAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLF 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E+L+R +SP R + + L ++ +++ ++ + + G Sbjct: 171 AGVGNIYRAESLFRLGISPFTPGREV--------ENLGQIWEDLVYLMQEGVRVGRIDTV 222 Query: 238 DYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G+PC CG I V GR+ F+C CQ Sbjct: 223 RPEHTPQAMGRAPRKDDHGGEVYVYRRLGQPCY-VCGTPISGQVMEGRNLFWCPTCQ 278 >gi|227487758|ref|ZP_03918074.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092260|gb|EEI27572.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] Length = 287 Score = 88.9 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 98/298 (32%), Gaps = 40/298 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE V + L M+ + LR P + G +V K+L Sbjct: 16 PEGDSVYQLATRL-QFMRGR-----EVLYSQLR--VPAYALERFDGSLCDNVWPYGKHLF 67 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 ++ G + HL M G++ + + K V + L + + V+ Sbjct: 68 MQ-FGEKILHTHLKMEGTWSVHPAG-KRWTKPGFTARVVLRLEGAPHPRPIEVV-----G 120 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 F + + LGP+ N + + + ALL+QK +AG+G Sbjct: 121 FSLGLVRVFPTVEYDHRVGYLGPDVLGNWDEDEAARRILARPDRPIGTALLDQKNLAGVG 180 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N Y E + A + P +L + L + + + + V Sbjct: 181 NEYRAEICFIAGVHPATPVAALGPDKVHDILALTRHLMWENRKS-------PIRVSTGVR 233 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ +PC CG +I + G R ++C +CQ Sbjct: 234 KVGETSY------VFGRNNKPC-RRCGTLIEKGFLGGVDRGGDADELERVIWWCPHCQ 284 >gi|84496902|ref|ZP_00995756.1| DNA glycosylase [Janibacter sp. HTCC2649] gi|84383670|gb|EAP99551.1| DNA glycosylase [Janibacter sp. HTCC2649] Length = 282 Score = 88.9 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 98/284 (34%), Gaps = 36/284 (12%) Query: 9 IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL 68 L + +T FP +A RG +V K+LL ++ L Sbjct: 3 RTADRLHRALSGTPITLSDFR-------FPEIATADLRGAVTTEVVSHGKHLLHRVDSGL 55 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 ++ HL M G + +E + + T+ + R+ + Sbjct: 56 TVHSHLKMEGQWRVERPADTARWLRRA-DLRAAVGTDTWSAIGLRLGMLEIV-------- 106 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + + LGP+ ++ Q + + ALL+Q+++AG+G ++ E+ Sbjct: 107 --PTSREGDIVGHLGPDVLGPDWDPEQAVAQVLASTTVIGAALLDQRVLAGVGTLWASES 164 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+ ++ P + ++ ++ + + A+ + R Sbjct: 165 LFIERIGPWSAAAQVAPERVEA--LVARIHRLMDTSRHHAVQSSTGVRRR---------- 212 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 V+ ++G PC CG IR + R+ FYC CQ Sbjct: 213 -GEEHYVHARSGRPC-RRCGNTIRVSMIGPPGRERTMFYCPTCQ 254 >gi|257068348|ref|YP_003154603.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] gi|256559166|gb|ACU85013.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] Length = 350 Score = 88.9 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 90/329 (27%), Gaps = 49/329 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + RF +A G ++ K+L Sbjct: 1 MPEGHTVHRLAAAFDRAFAGQR---VRTSSPQGRFSE----AAQLDGMVLLGAEAVGKHL 53 Query: 61 LIEL----------EGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNN 106 + + +HLG+ GS+ + Sbjct: 54 FLPFAPAADVDPGAPVVRHVHIHLGLYGSWTFAGDPGFADAHAIGAPRLRMGEREEELDG 113 Query: 107 TNTKKY-------RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY---- 155 + R+ + + + + Sbjct: 114 AADWRRLVPRPTVRLRIAGAHGLADLTGPTACEILDAQGRQAVLDRLGPDPLRPDPGGRE 173 Query: 156 ---LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 + + + L+NQK+VAGIGNIY E L+RA+L P R L Sbjct: 174 RRRFVEAVRRSRTTIGALLMNQKVVAGIGNIYRAELLFRARLDPFVPGRDLTAGMCEEMW 233 Query: 213 I-LYKLIQE------------IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L L+ + + I R D + + +F VY + Sbjct: 234 EDLVALMAYGARTGRIVTTQPAHRDVEARIVERSRGTRQNGDEDPEVVPREKSFYVYHRQ 293 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG +R A R+ F+C CQ Sbjct: 294 TLPC-RLCGTTVRSGDLAARTVFWCPRCQ 321 >gi|227501449|ref|ZP_03931498.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077474|gb|EEI15437.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 268 Score = 88.9 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 101/299 (33%), Gaps = 44/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRL-QFMTGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I + + K + + L R I Sbjct: 53 FMQFDQT-IVHTHLKMEGTWAIHYAGD-RWRKPGHSARIVLQL-----AHSPRDIELVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 GF+D+ + + + + + ++ ALL+QK+VAGI Sbjct: 106 WLGFVDIFDADQYFSRIAHLG-PDILDPDWDREEAVRRLRARPERSIGTALLDQKVVAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + + +I K ++ A + V Sbjct: 165 GNEYRAEICFLAGVHPATPVAEVDVEQ----------VVDIGKRIMWANRNSPIRVTTGV 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C CG +I++ G R ++C +CQ Sbjct: 215 RRAGETTY------VFGRNRKRC-RRCGTIIQKDSLGGVDRGGDEGELERIIWFCPHCQ 266 >gi|167746192|ref|ZP_02418319.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] gi|167654185|gb|EDR98314.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] Length = 273 Score = 88.9 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPE L +K + +F + G+K++D Sbjct: 1 MIELPEALARADELKSELKGKRAEKVWPPSSPHKFCWFNGEASSYDDMLSGRKVVDAQGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I EG+L + + G++ + P + I ++ T +Y Sbjct: 61 GIFAEIIFEGDLRVCFNDGVNVRIF------GEGDNIPGKYQLRIDFSDGTVLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 E + + F + N + K L ++ Sbjct: 115 GSIACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAK----PNLSAKAFLATKQR 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GN + + L+ A + P +K S ++ L I++VL + + G Sbjct: 171 IPGLGNGVLQDILFEAGIHPKKKIGSFTEHEK------ELLFVSIKEVLSEMVRLRGRDT 224 Query: 237 RDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ + Y K G CG I + G + ++C CQ Sbjct: 225 E--KDLWGNPGGYKTKLSKNTY-KDG---CPKCGGEITKAAYLGGTVYFCPECQ 272 >gi|312195439|ref|YP_004015500.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Frankia sp. EuI1c] gi|311226775|gb|ADP79630.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Frankia sp. EuI1c] Length = 278 Score = 88.5 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 106/296 (35%), Gaps = 40/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + ++ + F P + + G +++V R K+L Sbjct: 1 MPEGDTVLQASRRLHQALAGQVLS---VSD----FRVPRYATVDLTGGTVLEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G +++ HL M G++ + A + L N + Sbjct: 54 LMRCSGGVTVHSHLRMEGAWRVFAAGEAWRGGPGW--QIRAVLGNARH-------VAVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R +D++ T+ + + + A L + + + LL+Q ++AG+ Sbjct: 105 RLPVLDVLRTADESKVVGHLG-PDVLGPDWDLARVLANARTHPEREIGSVLLDQTVLAGL 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y EA + A LSP + + + + ++ ++ V Sbjct: 164 GNVYRIEACFVAGLSPWTRIGDVPELDSVVDRARQLIVLNAER---------------PV 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-------GRSTFYCTYCQK 289 + VYG+ P CG IR QA GR T++C CQ+ Sbjct: 209 RVTTGSARPGEQLWVYGRGRRP-CRRCGTAIRMAEQAPSDAPEEGRVTYWCPRCQR 263 >gi|306834658|ref|ZP_07467747.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] gi|304569461|gb|EFM44937.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] Length = 268 Score = 88.5 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 100/299 (33%), Gaps = 44/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRL-QFMAGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I + + K + + L R I Sbjct: 53 FMQFDQT-IVHTHLKMEGTWAIHYAGD-RWRKPGHSARIVLQL-----AHSPRDIELVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 GF+D+ + + + + + ++ ALL+QK VAGI Sbjct: 106 WLGFVDIFDADQYFSRINHLG-PDILDPDWDREEAVRRLRARPERSIGTALLDQKAVAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + + +I K ++ A + V Sbjct: 165 GNEYRAEICFLAGVHPATPVAEVDVEQ----------VLDIGKRIMWANRNSPIRVTTGV 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C CG +I++ G R ++C +CQ Sbjct: 215 RRAGETTY------VFGRNRKRC-RRCGTIIQKDSLGGVDRGGDEGELERIIWFCPHCQ 266 >gi|213023617|ref|ZP_03338064.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 61 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +C Sbjct: 1 SIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHC 59 Query: 288 QK 289 QK Sbjct: 60 QK 61 >gi|309807130|ref|ZP_07701107.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] gi|308166481|gb|EFO68683.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] Length = 78 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L +I + AI G++ ++ DG G +Q+ VYGK+GEPC S C + +I Sbjct: 3 ELFYDINNTIKIAIQYHGTTFHSFLDADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIK 61 Query: 276 QAGRSTFYCTYCQ 288 GR T +C CQ Sbjct: 62 VNGRGTTFCPLCQ 74 >gi|254391826|ref|ZP_05007021.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|197705508|gb|EDY51320.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 240 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 27/255 (10%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P + +A G++++ R K+ L EG L++ HL M G++ + Sbjct: 4 PRYETADLTGRRVLKEVPRGKHKLARFEGGLTLHSHLRMDGAWRVFPAGERPRGGPEHQI 63 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + +++T R ++L+ T+ + + + A Sbjct: 64 RAVLGTSSHTA---------VGYRLPVLELLRTTDEQKVVGHLG-PDLLGPDWDPAAARE 113 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + L ALL+Q+ +AGIGN+Y CE + A ++P P+ +L +L Sbjct: 114 RLLADPSRPLGEALLDQRNLAGIGNVYKCELAFLAGVTPWLPVGE------LPEGVLERL 167 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + ++ ++ ++ GS + V+G+ G PC CG +RR Sbjct: 168 LATAHRL----LEENRDAVERRTTAAGS--RAGSRLHVHGRAGRPC-PRCGTPVRRSGPG 220 Query: 278 ----GRSTFYCTYCQ 288 R +++C CQ Sbjct: 221 RAGDERISYWCPGCQ 235 >gi|300859464|ref|YP_003784447.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686918|gb|ADK29840.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302207145|gb|ADL11487.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] Length = 273 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 107/297 (36%), Gaps = 40/297 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF A K+L Sbjct: 5 MPEGHVIHRLARELNKHFQGK---APRVTSPQGRFAAEAALIHA---APFYQAHAWGKHL 58 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 IE + + +HLG+ GS + AK + + + + R Sbjct: 59 FIEFDAPTPERIVHIHLGLIGSLHFDPIEEAK-------GQIRLRIEGDKVAANLR---- 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G + + + LG +P + + + + ++ + L++Q++ Sbjct: 108 -----GPQWCRLITTEEMEVAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLF 162 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E+L+R +SP R + + L ++ +++ ++ + + G Sbjct: 163 AGVGNIYRAESLFRLGISPFTPGREV--------ENLGQIWEDLVYLMQEGVRVGRIDTV 214 Query: 238 DYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G+PC CG I V GR+ F+C CQ Sbjct: 215 RPEHTPQAMGRAPRKDDHGGEVYVYRRLGQPCY-VCGTPISGQVMEGRNLFWCPTCQ 270 >gi|227542402|ref|ZP_03972451.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181600|gb|EEI62572.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] Length = 287 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 98/298 (32%), Gaps = 40/298 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE V + L M+ + LR P + G +V K+L Sbjct: 16 PEGDSVYQLATRL-QFMRGR-----EVLYSQLR--VPAYALERFDGSLCDNVWPYGKHLF 67 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 ++ G + HL M G++ + + K V + L + + V+ Sbjct: 68 MQ-FGEKILHTHLKMEGTWSVHPAG-KRWTKPGFTARVVLRLEGAPHPRPIEVV-----G 120 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 F + + LGP+ N + + + ALL+QK +AG+G Sbjct: 121 FSLGLVRVFPTVEYAHRVGYLGPDVLGNWDEDEAARRILARPDRPIGTALLDQKNLAGVG 180 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N Y E + A + P +L + + + + + + V Sbjct: 181 NEYRAEICFIAGVHPATPVAALGPDKVHDILAVTRRLMWENRNS-------PIRVSTGVR 233 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ +PC CG +I + G R ++C +CQ Sbjct: 234 KVGETSY------VFGRNNKPC-RRCGTLIEKGFLGGVDRGGDADELERVIWWCPHCQ 284 >gi|319442584|ref|ZP_07991740.1| putative endonuclease VIII [Corynebacterium variabile DSM 44702] Length = 301 Score = 88.1 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 89/290 (30%), Gaps = 38/290 (13%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 M T+T + P + G+ + +V K+L +++ G + HL Sbjct: 31 QWMGGRTLTRSDIR-------VPRFATEDLTGRTVTEVWPYGKHLFMDIGG-RVLHTHLK 82 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M G + I HT+ + + V + + F + + + Sbjct: 83 MEGVWSI-HTAGTRWRRPGHTARVVLGFAPQHAGGPEIEVVGHSLGFVRLFDRDRYGEVV 141 Query: 136 YPPLRTLGPEPADNSFNAIYL------THQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + ++ + + ++ ALL+Q+ VAGIGN Y E Sbjct: 142 AHLGPDILAPDWASTPPDGHSGRDEALRRILARPERSIGAALLDQRNVAGIGNEYRAEVC 201 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 + + P R + T +L + + R D G Sbjct: 202 FLGGVDPRRPVGTGEVATTTAAHLL--------DLSRRVMWENRLEPRRLFTGDRRPGMG 253 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 V+G+ + C CG I + G R ++C CQ Sbjct: 254 N---YVFGRAEKAC-RRCGSPIMKSFLGGVDADGDEGELERVIWWCPVCQ 299 >gi|29349896|ref|NP_813399.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29341807|gb|AAO79593.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 279 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE + L + ++D+ + +F + F+ K+I + Sbjct: 1 MIEAPEARYLCEQLTETVVGKRISDVFIQFSPHKFAWFNGNSDEFAEWLVDKRINSAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I + +++ G++ ++ T K P + + I+ + + +Y Sbjct: 61 GGMVEI-TIEDKVLVLTDGVNLRYLTPGT------KLPAKHQLLIAFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + +Y A + + L + + + K L ++ Sbjct: 114 GGLMCYDKNAATGMLSEYYRTAKSKPQVMSDAFSKEYFLGLINDESAQKKSAKAFLATEQ 173 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GN + + L+ A + P +K +L L ++++ + D GG + Sbjct: 174 TVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYRQGGRN 227 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 228 TES--DLFGENGKYTACLSK-DTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|296130989|ref|YP_003638239.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] gi|296022804|gb|ADG76040.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] Length = 305 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 101/320 (31%), Gaps = 69/320 (21%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 + + + RF +A G+ + + K L + + VHLG+ Sbjct: 5 LVGRPLA---VSSPQGRF---AAGAARLDGRTMTSATAVGKQLFATFDTGEVLRVHLGLY 58 Query: 78 GSFIIEHT---------------------------------------------SCAKPIK 92 G++ + Sbjct: 59 GAWDLYGDVSPLGDGARARSSLGAPRVRPGAVMDAQPSTRRLRMGEGESEVAVDAGATWP 118 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 P V + L + + R +++ P ++ Sbjct: 119 PPPIGQVRVRLDSGSVVADLR-------GPTACEVLTADEAALVRDRLGPDPLVVEDVDT 171 Query: 153 A-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 A + + ++N + L++Q +VAGIGNIY E L+RA+L P R P Sbjct: 172 AGEVVVDRVTRRNVAVGQLLMDQAVVAGIGNIYRAELLFRARLDPWTPGRR------VPA 225 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN---AFSVYGKTGEPCLSNCG 268 D++ + ++ +L D + G R+ + G + VYG+ G+PC CG Sbjct: 226 DVVRAVWRDWTGLLADGVRDGMILTREDLDAAGRAAAVADPTLRHWVYGRAGQPC-RVCG 284 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 +R A R + C CQ Sbjct: 285 TPVRVEEMATRKLYRCPVCQ 304 >gi|134117606|ref|XP_772574.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255189|gb|EAL17927.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] Length = 475 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 109/326 (33%), Gaps = 40/326 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 K-YLLIELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLT--N 105 K + + ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + R + R + + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKKG 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI---- 221 +K +++Q AG+GN E L++A++ P +L + N + + Sbjct: 181 TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAISV 240 Query: 222 --------QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ---- 269 L + G++ + + D + G+ GE + Sbjct: 241 NADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVD---GEGGEDVEPEDKEFLEL 297 Query: 270 ------MIRRIVQAGRSTFYCTYCQK 289 I+ I GR+T QK Sbjct: 298 PDGSPATIKFIEVGGRTTALVEELQK 323 >gi|172041197|ref|YP_001800911.1| putative endonuclease VIII [Corynebacterium urealyticum DSM 7109] gi|171852501|emb|CAQ05477.1| putative endonuclease VIII [Corynebacterium urealyticum DSM 7109] Length = 290 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 102/311 (32%), Gaps = 47/311 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M + + R P +A+ G++I V K+L Sbjct: 1 MPEGDSVLQLANRL-KWMPGR-----EVLHSDFR--VPALATASITGERIQAVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + HL M G + I H + ++ + V + L+ + + Sbjct: 53 FIQAGEQ-ILHTHLKMEGVWAI-HAAGSRWRRPGYTARVVLHLSPQHPSGPPIEVVGHEL 110 Query: 121 RFGFMDLVET--------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 F + P + + L + + +L ALL Sbjct: 111 GFVRLYPARDYPAVVQHLGPDILDPCWASEEFRDTGRTGRDEALRRILRRPDRSLGAALL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAGIGN Y E ++ L P + + L + + + + ++ Sbjct: 171 DQRNVAGIGNEYRAEVMFLTGLHPAVPVGRVGEEKVAQALDLARRV-----MWENRLEPH 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------------- 278 D G+ V+G+ +PC CG+ I + G Sbjct: 226 RVFTGDRRPGMGT--------FVFGRAAKPC-RRCGETIEQSTLGGRFAGGDPVLDAGEL 276 Query: 279 -RSTFYCTYCQ 288 R ++C +CQ Sbjct: 277 ERIIWWCPHCQ 287 >gi|58270186|ref|XP_572249.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57228507|gb|AAW44942.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 475 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 109/326 (33%), Gaps = 40/326 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 K-YLLIELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLT--N 105 K + + ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + R + R + + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKKG 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI---- 221 +K +++Q AG+GN E L++A++ P +L + N + + Sbjct: 181 TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAISV 240 Query: 222 --------QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ---- 269 L + G++ + + D + G+ GE + Sbjct: 241 NADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVD---GEGGEDVEPEDKEFLEL 297 Query: 270 ------MIRRIVQAGRSTFYCTYCQK 289 I+ I GR+T QK Sbjct: 298 PDGSPATIKFIEVGGRTTALVEELQK 323 >gi|76664749|emb|CAJ17813.1| formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma solani] Length = 98 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+ AKL P K +L + K KVL AI GG+++ Y G G Sbjct: 1 VLFLAKLHPETKACTLNIQQAQTILTISK------KVLKTAIQLGGTTISTYESQQGIQG 54 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQN+ V+ K C NC I +I GR T++C CQK Sbjct: 55 TFQNSLLVHSKQNYLCF-NCKTKIIKIKVGGRGTYFCPSCQK 95 >gi|58270184|ref|XP_572248.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57228506|gb|AAW44941.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 447 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 109/326 (33%), Gaps = 40/326 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 K-YLLIELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLT--N 105 K + + ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + R + R + + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKKG 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI---- 221 +K +++Q AG+GN E L++A++ P +L + N + + Sbjct: 181 TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAISV 240 Query: 222 --------QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ---- 269 L + G++ + + D + G+ GE + Sbjct: 241 NADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVD---GEGGEDVEPEDKEFLEL 297 Query: 270 ------MIRRIVQAGRSTFYCTYCQK 289 I+ I GR+T QK Sbjct: 298 PDGSPATIKFIEVGGRTTALVEELQK 323 >gi|312886552|ref|ZP_07746160.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] gi|311300955|gb|EFQ78016.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 104/283 (36%), Gaps = 34/283 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ RNL +K T+ + + A G+ + +V R K L Sbjct: 1 MPELPDLQVFSRNLTKALKGKTLAKVHVLNHKKLNVPVKELQEAIEGQILTEVKRVGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E + + +HL + G + + + ++ + + ++T Sbjct: 61 HLEFKNGHVLGLHLMLHGQLSLFNKHSEQ-----KYTIIELLFDDDTGLTLS-------- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + P F+ YL + + +K LL+Q ++ GI Sbjct: 108 --------DFQAAATPTLDPQDPGVPDALDFDLDYLKEKLAATRTAIKTVLLDQHVLRGI 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AKLSP + + + L + I+ VL DA + Sbjct: 160 GNAYADEILWDAKLSPFSASNKIPDAQ------IKVLAKSIKHVLEDAEKQIIKT----- 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + + G+ I + R T+Y Sbjct: 209 HPDIISGEVRDFMQVHSSKKKQTST--GETIHQKPVGSRKTYY 249 >gi|308276012|gb|ADO25911.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 281 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 35/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L M+ V + P A G+ + V K L Sbjct: 9 MPEGDSIYQLSHRL-RFMEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ + HL M G++ + P H L + T K+ + Sbjct: 61 FMQIGE-DILHTHLKMEGAWAVYRKGD--RWSKPAHTARVQLLLDGTPQKRSIEVVGFSL 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + +N+ ++ + + A+L+Q+ +AG+ Sbjct: 118 GFVRIFPACDYPGAIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRNLAGV 177 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + R + + + + + + + + ++ Sbjct: 178 GNEYRAEICFLCGVHPATRVRDVDVDR------ILLITRRLMWANRLSTVRVTTGIKRLG 231 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 V+G+ +PC CG I + R ++C +CQ Sbjct: 232 ETT----------YVFGRNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 275 >gi|253569736|ref|ZP_04847145.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] gi|251840117|gb|EES68199.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] Length = 279 Score = 87.0 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE + L + ++D+ + +F + F+ K+I + Sbjct: 1 MIEAPEARYLCEQLTETVVGKRISDVFIQFSPHKFAWFNGNSDEFAEWLVDKRINSAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I + +++ G++ ++ T K P + + I+ + + +Y Sbjct: 61 GGMVEI-TIEDKVLVLTDGVNLRYLTPGT------KLPAKHQLLIAFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + +Y A + + L + + + K L ++ Sbjct: 114 GGIMCYSKDAANGVLSEYYRTAKSKPQVMSDAFSKEYFLGLINDESAQKKSAKAFLATEQ 173 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GN + + L+ A + P +K +L L ++++ + D GG + Sbjct: 174 TVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYRQGGRN 227 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 228 TES--DLFGENGKYTACLSK-DTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|297170783|gb|ADI21804.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_24M16] gi|297181570|gb|ADI17755.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_31E21] Length = 261 Score = 86.6 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 97/288 (33%), Gaps = 31/288 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R+ ++ +T + RF ++ G+ + V K+L Sbjct: 1 MPEGHTIHRAARDHHKILAGQKLT---VSSPQGRF---AEGASNLTGQLCLKVEAIGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + VHLG+ G K V + L + T+ Sbjct: 55 LYRFNNGDVLHVHLGLFGKIRKFKLPLVK-----PRGVVRVRLVSTTHAIDI-------N 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++ + +GP+ + + ++ K + +++Q ++AGI Sbjct: 103 GPTICRVLAPQEVLT--LIDRIGPDVLRSGSDPELAFNRIKKSKLPIGRLIMDQSVMAGI 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LWR ++ P + + ++ + + +L + D Sbjct: 161 GNIYRSEILWRQRVHPETPGNKIDRLTFD------RIWNDAKVLLAIGVKRNAIITVDDA 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + ++ +++ K C IR R TF C CQ Sbjct: 215 GLSKTK--YKERVNIFSKDN---CPKCKGKIRSFKINARRTFVCEICQ 257 >gi|302330336|gb|ADL20530.1| Putative formamido pyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] Length = 273 Score = 86.6 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 35/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L M+ V + P A G+ + V K L Sbjct: 1 MPEGDSIYQLSHRL-RFMEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ + HL M G++ + P H L + T K+ + Sbjct: 53 FMQIGE-DILHTHLKMEGAWAVYRKGD--RWSKPAHTARVQLLLDGTPQKRSIEVVGFSL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F + + + +N+ ++ + + A+L+Q+ +AG+ Sbjct: 110 GFVRIFPACDYPGAIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRNLAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + + P + R + + + + + + + + ++ Sbjct: 170 GNEYRAEICFLCGVHPATRVRDVDVDR------ILLITRRLMWANRLSTVRVTTGIKRLG 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 V+G+ +PC CG I + R ++C +CQ Sbjct: 224 ETT----------YVFGRNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 267 >gi|134117608|ref|XP_772575.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255190|gb|EAL17928.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] Length = 447 Score = 86.6 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 109/326 (33%), Gaps = 40/326 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 K-YLLIELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLT--N 105 K + + ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + R + R + + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKKG 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI---- 221 +K +++Q AG+GN E L++A++ P +L + N + + Sbjct: 181 TVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAISV 240 Query: 222 --------QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ---- 269 L + G++ + + D + G+ GE + Sbjct: 241 NADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVD---GEGGEDVEPEDKEFLEL 297 Query: 270 ------MIRRIVQAGRSTFYCTYCQK 289 I+ I GR+T QK Sbjct: 298 PDGSPATIKFIEVGGRTTALVEELQK 323 >gi|149923089|ref|ZP_01911505.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] gi|149816065|gb|EDM75577.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] Length = 292 Score = 86.6 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 101/307 (32%), Gaps = 36/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA-ATRGKKIIDVSRRAKY 59 MPE + L V+ +T L+ R H A G+++ V R K Sbjct: 1 MPEGDSLHATAITLRAVLAGRELTGCELNWSGRRGVALAHGEAWRVPGRRVESVEARGKN 60 Query: 60 LLIELEGN----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 LLI + L+I H+GM+GS+ + V + Sbjct: 61 LLIRCAPHPEAVGAVEAGGRAALALTIWSHMGMTGSWHTYRPRERWALPPRDAPIVLRTA 120 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 + + R V L +P + A + Sbjct: 121 ERVVPCFRPHALELLGPRGVLRHRV-----LARLGPDLLAAKPDLDEALARMRALVEAEP 175 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 L +A++ Q++VAGIGN Y E L+ L P + + +L + ++ Sbjct: 176 GVELGDAVMRQRVVAGIGNEYKSELLFLEGLDPFAPLA--ALDEAARRSLLERAAALMRA 233 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RST 281 L D H G VY ++G PC CG+++ Q RST Sbjct: 234 NLASGAPRRTRFALDDPHGRG---------WVYERSGRPC-RVCGELVCMRRQGALARST 283 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 284 YFCPNCQ 290 >gi|306819251|ref|ZP_07452962.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] gi|304648033|gb|EFM45347.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] Length = 389 Score = 86.6 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 26/216 (12%) Query: 93 NPQHNHVTISLTNN-----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLG 143 +H L R+ +P + + R LG Sbjct: 181 PHEHFADRWFLMPGQFRVFAPVGTVRLRLMNPHGVADLSGPNRCELLDWAQTRAIAARLG 240 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P+P + +++ + AL++Q + AG+GNIY EAL+ A+LSP R + Sbjct: 241 PDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGNIYRAEALFAARLSPFVPAREV 300 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID----------GSIGYFQNAF 253 + L ++ + + + +++G + G I + Sbjct: 301 SER------KLRRVWDWLVEYMARGVESGRVTTLAPRDAADFATCQAGAGGKIQAVDQRY 354 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 355 YVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|227875970|ref|ZP_03994093.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] gi|227843502|gb|EEJ53688.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] Length = 389 Score = 86.6 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 26/216 (12%) Query: 93 NPQHNHVTISLTNN-----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLG 143 +H L R+ +P + + R LG Sbjct: 181 PHEHFADRWFLMPGQFRVFAPVGTVRLRLMNPHGVADLSGPNRCELLDWAQTRAIAARLG 240 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P+P + +++ + AL++Q + AG+GNIY EAL+ A+LSP R + Sbjct: 241 PDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGNIYRAEALFAARLSPFVPAREV 300 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID----------GSIGYFQNAF 253 + L ++ + + + +++G + G I + Sbjct: 301 SER------KLRRVWDWLVEYMARGVESGRVTTLAPRDAADFATCQAGAGGKIQAVDQRY 354 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 355 YVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|318078894|ref|ZP_07986226.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 210 Score = 86.2 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 15/209 (7%) Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 ++ P + + L + + + + + P + Sbjct: 1 WLRWQAKVPDTPPKPGRGPLALRLVLDDGSG---FDLTEAGTQKRLAVYVVDDPRTVPGI 57 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LGP+P F+ + LK AL +Q +VAG+GN Y E L AKLSP + Sbjct: 58 ARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVAGVGNAYSDEILHAAKLSPFKN 117 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L + + +L + ++ L +A+ + + G V+G+T Sbjct: 118 AGRLTEEETS------RLYEALRTTLTEAVARSRGIAAGSLKAEKKSG-----LRVHGRT 166 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GEPC CG IR + A S YC CQ Sbjct: 167 GEPC-PVCGDTIREVSFADSSLQYCPTCQ 194 >gi|227504232|ref|ZP_03934281.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227199187|gb|EEI79235.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 281 Score = 86.2 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 103/307 (33%), Gaps = 51/307 (16%) Query: 1 MPELPEV----EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPE V E + M VT + P + A G + + V Sbjct: 1 MPEGDSVLQLAERM-----QFMVGREVTKTSVR-------VPRYALARFDGMECVAVWPY 48 Query: 57 AKYLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L +E + L + HL M G + I + + V + L N + Sbjct: 49 GKHLFMEFAGDEDEPLILHTHLKMEGQWHIHYAGD-RWRAPGHTARVVLQLANE--PRDI 105 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 ++ + + + ++ L P+ N + + + ALL Sbjct: 106 EIVGHTLGFVEVYPESDYLGRIEHLGPDILDPDWEINGGREEAIWRIEARPERAIGAALL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK VAGIGN Y EA + A + P + + I ++ + ++ A Sbjct: 166 DQKNVAGIGNEYRAEACFIAGMHPAERVGDVDVEK----------IVDVSRTIMWANRFS 215 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RST 281 + V G Y V+G+T C CG I + V G R Sbjct: 216 LIRVTTGVRRAGETTY------VFGRTNARC-RRCGTPIEKGVLGGVDAGGDEGELERII 268 Query: 282 FYCTYCQ 288 ++C +CQ Sbjct: 269 WWCPHCQ 275 >gi|289620160|emb|CBI53287.1| unnamed protein product [Sordaria macrospora] Length = 416 Score = 86.2 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 104/315 (33%), Gaps = 48/315 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ L + V F +A GK++ + Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVVKHAEAIDDANVFGKVGTDGPKMAADLIGKRLYQQGPK 60 Query: 57 -AKYLLIELEGNLSIIVHLGMSGSFIIEH------------TSCAKPIKNPQHNHVTISL 103 + +++H GM+G I+ P++ I Sbjct: 61 ENTSGQLSQIMPPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIVT 120 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQ 159 + + DPRRFG + V+ K P + F YL + Sbjct: 121 EEGD-----EMAFTDPRRFGRVRAVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLRER 175 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + +K LL+Q +++GIGN E L++AKL P + + +L + Sbjct: 176 MKSRRVPIKALLLDQAVISGIGNWVADEVLYQAKLHPEQYCNDFSDAE------IKQLYE 229 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-----PCLSNCGQMIRRI 274 I+ V A+D G+S + F + + + G+ + G + + Sbjct: 230 SIRYVCQTAVDKLGNSDQ-----------FPDDWLFNYRWGKGSKNAHSHTPNGDKLAFL 278 Query: 275 VQAGRSTFYCTYCQK 289 GR++ Y QK Sbjct: 279 TVGGRTSCYAPARQK 293 >gi|332670076|ref|YP_004453084.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Cellulomonas fimi ATCC 484] gi|332339114|gb|AEE45697.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Cellulomonas fimi ATCC 484] Length = 258 Score = 85.8 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 94/292 (32%), Gaps = 47/292 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + + LR+ + G+ ++ K+L Sbjct: 1 MPEGDVLRRTAARLDAALVGTPLVRAE-----LRWPTAA--TVDLVGRTVLGTRPYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++ HL M G++ +E T + V L T + Sbjct: 54 LTRFDDGRTLHTHLRMDGTWRVEPTGSSAAQGRS--TRVRALLATERWTALGLL------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +D+V T + D L + + + LL+Q +VAGI Sbjct: 106 -LGMLDVVPTRDEATLVGHLG-PDVLDDPFDLDEALRRWAARGATPVAEVLLDQTVVAGI 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 G I++ E+L+ ++ P + + G + +L+Q A Sbjct: 164 GTIFMAESLFAERVWPWTPA-DAVPDPGRVLRVARRLMQRSVLSGRPAE----------- 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI----RRIVQAGRSTFYCTYCQ 288 V+G+ PC+ CG I R R F+C CQ Sbjct: 212 -------------RVHGRNRRPCV-RCGTPITVGSARPAPMSRPVFWCPRCQ 249 >gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens] Length = 268 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 25/254 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 M ELPEVE +R + T+ + D P GKKI+ R K Sbjct: 1 MAELPEVEAAKRLVNCHCLGATIVKAIVDNDTKVIDGVTPAVLQETLTGKKIVSALREGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----------QHNHVTISLTNNTN 108 ++ ++L+ S +FI++ ++ H+ V + L N Sbjct: 61 HIWLQLDSRPWPSYQFDTSSAFIVKGAKGSQYRSPKVSDEEEAFPTTHSKVLLQLDNG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 V + D RFG + L++ PP+ LG + NA T K ++K Sbjct: 119 ---VEVAFTDKLRFGRVRLLDNPSIA--PPISELGFDAYLELPNAEQFTEALKTKKGSVK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++AK+ P + SL + + KL I++VL A Sbjct: 174 ALLLDQSFLSGIGNWVGDEVLFQAKIHPEQSVNSLTEEQ------VAKLHTAIREVLDKA 227 Query: 229 IDAGGSSLRDYVHI 242 + G + Sbjct: 228 VSVDGDKEQYPRSW 241 >gi|300788843|ref|YP_003769134.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299798357|gb|ADJ48732.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 257 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 100/282 (35%), Gaps = 28/282 (9%) Query: 8 EIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 E+ R+ L + + + H R P + A RG ++ + RR K L E EG Sbjct: 2 ELARQVLAGAL-GRKIRSVDDHDDWVCRPHAPGDIATALRGGRLTEAHRRGKTLWCETEG 60 Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 G + + + ++ + + D + D Sbjct: 61 ---GDGRPGPNLGLHLGMAGQLRFAGESGPPGRIRDRDEKPEWFRFGITFADGEQLRLFD 117 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 S P L P + + + + LK LL+Q +VAGIGN+ Sbjct: 118 TRRLSRVRLDPDLD--ALGPDAGEISRRDFAERVGRGRAPLKARLLDQSVVAGIGNLLAD 175 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E LW+A LSP R + ++ L L + ++K L AI GG + + Sbjct: 176 ETLWQAALSPARPVHEMSSDD------LGHLHKALRKALRAAIRHGGVHTGEIIG----- 224 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + GE C CG + GRST++C+ Q Sbjct: 225 ---------HRRAGEHC-PRCGAEMSHGTVGGRSTWWCSKEQ 256 >gi|159489098|ref|XP_001702534.1| predicted protein [Chlamydomonas reinhardtii] gi|158280556|gb|EDP06313.1| predicted protein [Chlamydomonas reinhardtii] Length = 297 Score = 85.8 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 103/312 (33%), Gaps = 60/312 (19%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE R L+ + K T+ + + P A G+ ++ R+ Sbjct: 1 MPELPEVE-AARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 I ++G H P+ + + L R+ Y Sbjct: 60 MTGGIVVKGVGVTKYKRA--------HLESDPESWPPRFTKLELELQGG-----GRLAYV 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGP------EPADNSFNAIYLTHQFHKKNSNLKNAL 171 D RRFG + L+ PL LG P F + + +K L Sbjct: 107 DSRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERVVRAPSLRIKALL 166 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ +GIGN E L++A++ P + SL + L I++V+ A+ Sbjct: 167 LDQEFCSGIGNWVADEVLYQARIHPEQTATSLDDG------SMAALHAAIREVVGLAV-- 218 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--------------GQMIRRIVQA 277 ++ F + + + C G+ I + Sbjct: 219 ---------RVEADSDRFPRDWLFHYR------RVCLCLWTNKKASQDASGRAIHFVTVG 263 Query: 278 GRSTFYCTYCQK 289 R++ + Q+ Sbjct: 264 SRTSAFVPAVQQ 275 >gi|308177637|ref|YP_003917043.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307745100|emb|CBT76072.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 322 Score = 85.4 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 101/330 (30%), Gaps = 57/330 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R V + + RF + G + + K L Sbjct: 1 MPEGHSLHRLARQFDDVFGGQV---VAVTSPQGRFASD---AERIDGHHLEHAFAKGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +L + VHLG+ G+F + + + + + Y P Sbjct: 55 FCRFSNDLYLRVHLGLYGAFSFGGDHYFTGASSIGAPRKIGERESGPSPESEQ--YTGPP 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN---------------------------- 152 ++ + LR + Sbjct: 113 EPVGAVRARIVSEHGWADLRGPTACEVLDHDQVQIQLGKLGPDPLIGSALRIRAAKGQVD 172 Query: 153 -----------AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 K + + L+NQ +++G+GNIY EAL+R ++SP Sbjct: 173 PSLAATELEAGFNEFRANLLKTKTAIGIVLMNQALISGVGNIYRAEALFRNRISPQLPAN 232 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGKT 259 G KL +I V+ D + G ++L + G + + NA+ VY + Sbjct: 233 ------GLSTQKAKKLWWDIVSVMEDGVRDGKIITTLPEDRDPLGVV-WPDNAYYVYQRQ 285 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G C C I A R ++C CQK Sbjct: 286 GMGC-RKCSAQISLAEVAARKLYWCPRCQK 314 >gi|327539149|gb|EGF25779.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 261 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 89/285 (31%), Gaps = 25/285 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + + RF + A G+ + V K+L E Sbjct: 1 MPEGHKTHYLAREHNQRYAGERLDVSSPQGRF---SDGARAVSGRVLESVRAAGKHLFYE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EGN + VHLG GS++ + P+ + L + T + Sbjct: 58 FEGNRIVHVHLGRYGSYV-------EQSSPPEPPQGQVRLRAISPTHTLDLR-------- 102 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + + + LL+Q IVAG+GNI Sbjct: 103 GPSQCRLIDSEDQKSICDSLGPDPLSGGKKTEVWSAISASGKPIGGLLLDQSIVAGVGNI 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + EAL+ L P L + T L++ ++ L ++ + Sbjct: 163 FRAEALFETGLDPHIPGNKLSPDQFTRLW--KSLVKMMKLGLRHGRIITVTAKEAGKPLK 220 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G F +YGKT CG I A R +C CQ Sbjct: 221 ELAGN--ERFRIYGKTD---CPQCGGSIAVDSVASRKMHWCPECQ 260 >gi|254820987|ref|ZP_05225988.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium intracellulare ATCC 13950] Length = 239 Score = 85.4 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 19/256 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + +H LR + G + R K+ Sbjct: 1 MPELPDVEGFRRQLAATLPRRRIRHVQVHDPGILRNTTGQALARRLTGHRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ ++++H GM+G A + + + +SL + Y D Sbjct: 61 LVL-PTDGPALLIHSGMTGRPYYAPDGAA----HDPYERLVVSLDGG------ELRYADL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L + + + + ++ LK L++Q ++AG Sbjct: 110 RKLRGVWLADDADDIGHITGPQGPDALGLGLREFRAVLASRSARSRQLKPTLMDQSVLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ V E WRAK P L ++ + L + +VL A+ G LR Sbjct: 170 LGNLLVDEICWRAKTRPTVAVADLGDDD------VKALHAAMTRVLRTAV-RHGRVLRTA 222 Query: 240 VHIDGSIGYFQNAFSV 255 V G + V Sbjct: 223 VRHGRVPGLPRWLTRV 238 >gi|116669188|ref|YP_830121.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116609297|gb|ABK02021.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 279 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 90/298 (30%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + G + +V R K+L Sbjct: 1 MPEGDSVWRAAAQLHAALAGHQLTASDFR-------VPRFATLKLAGWTVDEVVPRGKHL 53 Query: 61 LIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + L L+I HL M G++ + V + T + ++ Sbjct: 54 FMRLRGPAEERLTIHSHLKMEGAWQVYPPGGRWRKPGFTARCVLRTATADAVGFSLGILE 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + P + A + + ALL+Q+ Sbjct: 114 VVRTADEDSVVGHLGPDLLGP-----------DWDMAEAERRLRAAPDVPIGVALLDQRN 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY CEA + + + P + L + + Sbjct: 163 LAGIGNIYRCEACFLSGIHPAAPVSEVTDLAAMMTTAKQLLEANLGPGRRTTVLNPRGMP 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTFYCTYCQ 288 + G GY VY + +PCL CG IR V A R ++C CQ Sbjct: 223 VGRMA--GRPGY-----WVYRREHQPCLK-CGTPIRHGVLAKGAGTEERDIYFCPSCQ 272 >gi|296394819|ref|YP_003659703.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Segniliparus rotundus DSM 44985] gi|296181966|gb|ADG98872.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Segniliparus rotundus DSM 44985] Length = 248 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 35/270 (12%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 T+ + P + + G + +V R K+L I + + HL M G Sbjct: 14 GKTLVRCDIR-------VPKYATVDLAGHVVDEVLSRGKHLFIRIGPAS-VHSHLKMEGE 65 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + A+ + P ++ ++ + + + Sbjct: 66 WRVV----AQKPRTPVRDYRVRAVLAAADVTALGLDLGVLEVLDRARDMAAVSHLGPDL- 120 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 + + + L LL+Q+++AG+GN+Y E + P Sbjct: 121 ------LGPDWDPETAAERLTAQPDRPLAETLLDQRVMAGVGNVYCNELCFLVGRLPTSP 174 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 + L + R D G VYG+ Sbjct: 175 VGAAGDPARLVARAHALLRANRDR------------ARRTTTGDSRPGR---ELWVYGRR 219 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G PC CG IR R ++C +CQ+ Sbjct: 220 GLPC-RRCGTPIRYDPDGPRVRYWCPFCQR 248 >gi|326330079|ref|ZP_08196392.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] gi|325952124|gb|EGD44151.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] Length = 250 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 85/295 (28%), Gaps = 53/295 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R+L + +T P +A G ++ + R K+L Sbjct: 1 MPEGDAVLRTARSLDKGLARQVLTRTDFR-------VPQLATADLSGGTVLGTATRGKHL 53 Query: 61 LI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L G ++ HL M GS+ I + K V + Sbjct: 54 LTRIDHRTGEWTLHTHLKMEGSWRILEAG-RRWPKPGFQARVVLRTERTEAVGFL----- 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 G ++LV + Q AD+ L + L AL +Q + Sbjct: 108 ----LGIVELVPRDQEEQLVAHLG-PDILADDWDPDTALQRLRDQPERPLFEALRDQTNL 162 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIG IY E + A ++P+R L+Q Sbjct: 163 AGIGTIYAAETCFIAGINPLRTVEEAGDRLPRILQRTRDLMQADWSRSR----------- 211 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ C CG + R +YC CQ Sbjct: 212 --------------QMWVYGR--RAC-RRCGGTVTVAKVGPPGKERPAYYCARCQ 249 >gi|86158513|ref|YP_465298.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Anaeromyxobacter dehalogenans 2CP-C] gi|85775024|gb|ABC81861.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Anaeromyxobacter dehalogenans 2CP-C] Length = 278 Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 91/295 (30%), Gaps = 28/295 (9%) Query: 1 MPELPEVEI---IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE R L + V L A G+ + V Sbjct: 1 MPEGD---TLARAARALHRALAGKPVVRFETVLPRLARVDAG---APVAGRTVERVESVG 54 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LL+ G L + HL M+GS+ + + + Sbjct: 55 KHLLLHFSGGLVLRTHLRMNGSWHLYRPGAPWRRPASAMRVLVEVPDAVAVAFEL----- 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKI 176 + + + + P L LGP+ A + + +AL++Q Sbjct: 110 -----PVAEWIRAADLGRAPALARLGPDLLSPAFDQAEAERRLRARGALAVADALVDQGA 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG GN E L+ A +SP R+ L +LI E GG Sbjct: 165 LAGAGNELKSEILFVAGVSPFRRVEDLADAELRAVIATARRLIAENVPPP----GPGGVE 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + VYG+ G PC CG I Q ++T++C CQ Sbjct: 221 TWRGGRRTTRRMNPRERAWVYGRGGRPC-RRCGAPIAFARQGPHAQATWWCPRCQ 274 >gi|162455413|ref|YP_001617780.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] gi|161165995|emb|CAN97300.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] Length = 290 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 108/301 (35%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVM----------KNMTVTDICLHRKNLRFDFPHHFSAATRGKKI 50 MPE P++E + L + +N V + L P A G +I Sbjct: 1 MPERPDLEYVVPILARELAGAAVAAARAENSVVLHVLL---------PERLDALLPGAEI 51 Query: 51 IDVSRRAKYLLIELE--GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 V+RRA ++ EL+ L +++ ++G F I + + SLT Sbjct: 52 RRVARRAHAVVFELDGARALDLVISPMLAGRFSITRPGETRIP-----TDLAFSLTLGDG 106 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-L 167 + D + + ++ + P L+ +G + D + + Sbjct: 107 ---RELRVRDDVQMSKVYVLARGDFDRLPGLQRVGLDVLDPRVFTQEAFRSAARGRRDLA 163 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K+ L++ + +G+ Y E L+ A++ P +SL + +L I +VL D Sbjct: 164 KDFLMDGTALDSMGDSYADEVLFEARIHPKATVQSLSEEETD------RLHAAIARVLGD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A ++ V G+ G+PC CG +RR G +C C Sbjct: 218 ATRTI------ARRAPALDERLRDFLKVRGRPGQPC-PRCGDKLRRASVHGHDAIFCPAC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|297520507|ref|ZP_06938893.1| endonuclease VIII [Escherichia coli OP50] Length = 197 Score = 84.6 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 27/219 (12%) Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 H + G + + T + K ++Y+ ++++ Sbjct: 2 HNQLYGVWRVVDTGEEPQTTRVLRVKL-------QTADKTILLYSASD----IEMLRPEQ 50 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 +P L+ +GP+ D + + + +N LL+Q +AG+GN E L Sbjct: 51 LTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEIL 110 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 W+ L+ K + L L L + ++ + G V + G Sbjct: 111 WQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQ-----VDENKHHGAL 159 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + GEPC CG +I + + R ++C CQ Sbjct: 160 -FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 196 >gi|329946399|ref|ZP_08293966.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328527375|gb|EGF54373.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 340 Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 101/351 (28%), Gaps = 76/351 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + + RF ++ G+ ++ K+L Sbjct: 1 MPEGHTIHRLAAALDELYGGQKL---HTSSPQGRF---ADGASRLDGQVLLGSQAHGKHL 54 Query: 61 L----------IELEGNLSIIVHLGMSGSFIIEHTS--CAKPIKNPQHNHVTISLTNNTN 108 ++ E + +HLG+ GS+ + A V + Sbjct: 55 FLPFGARADVPVDDESVTWLRIHLGLYGSWTFDGDREFTAPHAIGAPRRRVGERGEHALK 114 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN---------------- 152 + + + P + Sbjct: 115 GGGGSALAGLSGGADDVTDRREGQEGDSSSHDGPSPNEWEPPKPRGAVRLRLLGRHGVAD 174 Query: 153 --------------------------------AIYLTHQFHKKNSNLKNALLNQKIVAGI 180 A + + ++ L++Q +++G Sbjct: 175 LTGPAACELLDAEGVAAVRRRLGPDPLRADADAEVFVAKARSRRKSIGELLMDQSVISGA 234 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+R +SP R + + L + ++++ ++ + G + D Sbjct: 235 GNIYRAEALFRVGISPFRAGNRVSEER------LRAIWEDLRPLMEYGVATGFITTVDLD 288 Query: 241 HIDGSIGYFQN---AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + VY +TG PCL CG + A R F+C CQ Sbjct: 289 DVPDPLPPDDPEAGRWYVYHRTGRPCL-RCGTPVAEREMAARRLFWCPTCQ 338 >gi|11066941|gb|AAG28771.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 241 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 95/269 (35%), Gaps = 32/269 (11%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 +K +TD+ L + + G+ + + R K LL L++ H + Sbjct: 2 AIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKALLTHFSNGLTLYSHNQL 56 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 G + + T + + L K ++Y+ ++++ + Sbjct: 57 YGVWRVIDTGEIPQTTR----ILRVRLQ---TADKTILLYSASD----IEMLTAEQLTTH 105 Query: 137 PPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 P L+ +GP+ D + + +N LL+Q +AG+GN E LW+ Sbjct: 106 PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGNYLRVEILWQVG 165 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 L+ K + L + L L + + + + R + G F Sbjct: 166 LTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTRGQADENKHHGAL-FRF 213 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++ + GE C CG +I + + R + Sbjct: 214 KLFHRDGEAC-ERCGGIIEKTTLSSRPFY 241 >gi|227548294|ref|ZP_03978343.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079612|gb|EEI17575.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 269 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L M VT L P + G V K+L Sbjct: 1 MPEGDSVYQLSKRL-QFMAGREVTHTSLR-------VPRFATVDFTGLTCDRVWPLGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G ++ HL M G++ I + K V + L + + Sbjct: 53 FMQ-FGPETLHTHLKMEGTWSIHRAGT-RWRKPGHTARVVLRLADKQGEIEIV-----GH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G +D+ T ++ + + ++ + ALL+QK AGI Sbjct: 106 ELGLVDVFPTREYPTRMSYLGPDMLA-EDFDHDEVVRRILRTPDTEIGRALLDQKNAAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A P R+ R + + + L+ A + V Sbjct: 165 GNEYRAEICFLAGTHPARQVREVDVDKHVQLA----------RKLMWANKDSPVRVTTGV 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 G Y V+G+ +PC C +IR+ G R ++C CQ Sbjct: 215 KRAGETSY------VFGRNNKPC-RRCTTLIRKGFLGGEGDLERVIWWCPRCQ 260 >gi|255531639|ref|YP_003092011.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] gi|255344623|gb|ACU03949.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] Length = 258 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 32/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ NL K+ T+ + + G ++ V R K + Sbjct: 1 MPELPDLEVFAANLEKRFKHKTLERLEVQVAKKLNVPEKELKETLEGHQLTAVKREGKTI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HL + G+ + ++ V+ Sbjct: 61 QLHFGPERILGLHLMLHGALNLIEADEKI-----KYPIVSFHFKTGHG------------ 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + P+ + P+ + YL KK + +K L++Q ++ GI Sbjct: 104 --FALTDFQKAATLTLNPVVSDVPDALSKEMSVNYLEAVLAKKKAPIKTVLMDQHLIRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A +SP +++ PK + +L Q I K+L I L D + Sbjct: 162 GNTYADEILWEAGISPFSVSKA------IPKAKVRELHQVIGKLLRKEIQQISKMLPDEL 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 G ++ ++G G G+ I GR ++Y Sbjct: 216 G-----GEIKDFLKIHG-AGIKESPT-GKKILVEEIGGRKSYY 251 >gi|256832270|ref|YP_003160997.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685801|gb|ACV08694.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Jonesia denitrificans DSM 20603] Length = 284 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 105/314 (33%), Gaps = 58/314 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L V+ ++T + L ++ A RG + DV AK+L Sbjct: 1 MPEGDTVLSVANRLHEVLGGHSLTRVDLRWPSV------SVDAFNRG-VVHDVDAYAKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------------PIKNPQHNHVTISLTNNT 107 + +S+ HL M G + + T + + + + Sbjct: 54 FVRFASGVSLHTHLRMDGVWRVVPTGSREAQASSPTVRAVLATSEWTCVGYELGMMDIVP 113 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQ---------YPPLRTLGPEPADNSFNAIYLTH 158 ++ +I + V T L Q P +D + Sbjct: 114 TARERDLIAHLGPDILADQCVPTHLLDQARADPARFLAPRRAHTSLLVSDRDWIEALSRF 173 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + + LL+Q +V+GIG I++ E L+ ++SP+R L L+ Sbjct: 174 AAQPQTRPIGETLLDQSVVSGIGTIFMAEGLFTHRISPMRPLAD---------TPLVPLL 224 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA- 277 I+ LI + + V+ + G+PC+ CG I R + Sbjct: 225 ASIRGHLIRGVVRPVA---------------GRRIHVHSRRGQPCM-RCGTPIARRLVGP 268 Query: 278 ---GRSTFYCTYCQ 288 R FYC CQ Sbjct: 269 PTAQRPAFYCPTCQ 282 >gi|227497434|ref|ZP_03927666.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] gi|226833110|gb|EEH65493.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] Length = 360 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 10/152 (6%) Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R LGP+P + ++ + L++Q +++G+GNIY E+L R +SP Sbjct: 214 RRLGPDPLRPDGDPQVFVDAVRRRRKAVGELLMDQSVISGVGNIYRAESLLRRGVSPFVP 273 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVY 256 + + L+ L +++ ++ + G + + + + + VY Sbjct: 274 GNRVSEKR------LHGLWEDLVPLMEYGVATGFITTVEPEDVPEPVPAGDEEAARWYVY 327 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PCL CG + AGR F+C CQ Sbjct: 328 HRTGRPCL-RCGTPVSEREVAGRRLFWCPRCQ 358 Score = 40.3 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTIHRLAAALSELFGGQRL---HVSSPQGRF---AAGAARLDGQVLVGAEAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFI 81 + I L +GS Sbjct: 55 FVAFAPQADIPFELPGAGSVR 75 >gi|259909084|ref|YP_002649440.1| endonuclease VIII [Erwinia pyrifoliae Ep1/96] gi|224964706|emb|CAX56223.1| Endonuclease VIII [Erwinia pyrifoliae Ep1/96] Length = 229 Score = 84.3 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 93/245 (37%), Gaps = 24/245 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGVEP---AQSKRVLRVRL---AAADKTLLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILWQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQADE 219 Query: 238 DYVHI 242 ++ H Sbjct: 220 NHHHG 224 >gi|307700125|ref|ZP_07637171.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] gi|307614674|gb|EFN93897.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] Length = 389 Score = 83.9 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 26/216 (12%) Query: 93 NPQHNHVTISLTNN-----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLG 143 +H L R+ +P + + + LG Sbjct: 181 PHEHFADRWFLMPGQFRVFAPVGTVRLRLMNPHGVADLSGPNRCELLDWAQTQAIAARLG 240 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P+P + + + + +L++Q ++AG+GNIY EAL+ A+LSP R + Sbjct: 241 PDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGNIYRAEALFAARLSPFVPAREV 300 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID----------GSIGYFQNAF 253 + L ++ + + + +++G + + Sbjct: 301 SER------KLRRVWDWLVEYMARGVESGRITTIGREDAAAFAASEAAAGREAQAVDQRY 354 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 355 YVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|255020515|ref|ZP_05292579.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254970035|gb|EET27533.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 268 Score = 83.9 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 106/290 (36%), Gaps = 25/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E+ R+ L + + + + + ++ D S A +G++I D+ R + Sbjct: 1 MAELPEIELFRQKLRRNVLHKRLGLVQMRNGKGEIQDDGAGLASDALKGREITDLYRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL EL+G +++ LG S +E P + + + N + R+ Sbjct: 61 YLFWELDGREILVLQLGGELSVEVER-GAPTPAEGGDEPRAQLEIQINAH---MRLRLQG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + L++ S + P + +L ++ S L+N LL+ + Sbjct: 117 TQLGNRLRLLDESSDVDFLTKLGPDPLLLPDG-ARSHLREALARRRSALRNVLLDDAFLP 175 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+G ++ E L++A L P R +L + + Sbjct: 176 GLGPVWADEILFQAGLRPDRTVPTLTEEERERLLE-----------------QIARVIER 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F + C CG + + GR+ +C CQ Sbjct: 219 ALRSQAKVPLLPKTFLTRHREDGHC-PGCGGALETLSVGGRNALFCPACQ 267 >gi|325068497|ref|ZP_08127170.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Actinomyces oris K20] Length = 156 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%) Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + +K LL+Q +V+GIGNIY E LW A + +R G ++ + Sbjct: 24 VARVRASRRAIKTQLLDQGLVSGIGNIYADEGLWEAGVHGLRPGT------GLGPRVVAR 77 Query: 217 LIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +++ +V+ A++ GG+S YV ++G+ G+F YG+ G C CG + R Sbjct: 78 ILESTAEVMRRALEVGGTSFDALYVDVEGAAGFFARELGAYGRHGLEC-RRCGATMAREA 136 Query: 276 QAGRSTFYCTYCQ 288 GRS YC CQ Sbjct: 137 LGGRSHTYCPRCQ 149 >gi|269977888|ref|ZP_06184842.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933854|gb|EEZ90434.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 389 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 26/216 (12%) Query: 93 NPQHNHVTISLTNN-----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR----TLG 143 +H L R+ +P + + + LG Sbjct: 181 PHEHFADRWFLMPGQFRVFAPVGTVRLRLMNPHGVADLSGPNRCELLDWAQTQAIAARLG 240 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P+P + + + + +L++Q ++AG+GNIY EAL+ A+LSP R + Sbjct: 241 PDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGNIYRAEALFAARLSPFVPAREV 300 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID----------GSIGYFQNAF 253 + L ++ + + + +++G + + Sbjct: 301 SER------KLRRVWDWLVEYMARGVESGRITTIGREDAAAFAASEAAAGREAQAIDRRY 354 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 355 YVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|308176221|ref|YP_003915627.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307743684|emb|CBT74656.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 274 Score = 83.5 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 103/305 (33%), Gaps = 51/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + +LR P + G ++ +V R K+L Sbjct: 1 MPEGDSVYRATARLHQALAGEVLLA-----SDLR--VPALATVDVAGYEVREVIPRGKHL 53 Query: 61 LIELEGN-----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+ L+ L++ HL M G + + + K P H + T Sbjct: 54 LMRLQPPARANPDFAQPALTLHSHLLMEGRWDLYAPG--ERWKRPAHTARVVLQTARITA 111 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + + + + + + L + + + Sbjct: 112 VGFDI---------AQVKLLPTEQEADVVGHLGPDLLGVDWDAQVALENLRAEPQLGIGQ 162 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q+I+AG+GN+Y E L+ +++ P+ R L L + V D Sbjct: 163 ALLDQRIMAGVGNVYRSEILFLSRVHPLTAVR-----EVQNLPALIDLAHRLLVVNKD-- 215 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTFY 283 R G G ++ VYG+ +PCL CG I + A R + Sbjct: 216 -------RPRRVTTGQPGT-RDPLWVYGRAAKPCL-RCGTRIELLRIASTPTGIERDCYL 266 Query: 284 CTYCQ 288 C CQ Sbjct: 267 CPSCQ 271 >gi|254791860|ref|YP_003076697.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|254591260|gb|ACT70621.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|326345767|gb|EGD69506.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1125] Length = 273 Score = 83.5 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 91/247 (36%), Gaps = 24/247 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKL-------QTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-----LYKLIQEIQKVLIDAIDAG 232 AG+GN E LW+ L+ K ++ ++ N L L + + +I Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKTSMRRNWMHSHTRYWIFLGFLTLRGGRWMRISIMGR 224 Query: 233 GSSLRDY 239 +LR + Sbjct: 225 CFALRFF 231 >gi|28572527|ref|NP_789307.1| endonuclease VIII [Tropheryma whipplei TW08/27] gi|28410659|emb|CAD67045.1| endonuclease VIII [Tropheryma whipplei TW08/27] Length = 294 Score = 83.5 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 106/313 (33%), Gaps = 48/313 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R+ + N I + RF + +K+I K LL+ Sbjct: 1 MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRF---SPGARLLDKQKMISAKAYGKQLLLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHT-----------------SCAKPIKNPQHN--------- 97 E N + VHLG+ G++ + +K P Sbjct: 58 FENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGA 117 Query: 98 -HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIY 155 + + + + + + + + + LGP+P N Sbjct: 118 SWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNR 177 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 K N + L+NQ +AGIGNIY E L+R +++P + + P+D L Sbjct: 178 FIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNT------IPEDTLK 231 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ + +L I G + + G VY PC S C I + Sbjct: 232 RIWDDWTVLLKCGIKTGQMITM-----NKAPG-----HWVYNHHKSPC-SVCFHPIDCVN 280 Query: 276 QAGRSTFYCTYCQ 288 AGR ++C CQ Sbjct: 281 VAGRKLYWCVVCQ 293 >gi|28493363|ref|NP_787524.1| DNA glycosylase [Tropheryma whipplei str. Twist] gi|28476404|gb|AAO44493.1| putative DNA glycosylase [Tropheryma whipplei str. Twist] Length = 294 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 106/313 (33%), Gaps = 48/313 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R+ + N I + RF + +++I K LL+ Sbjct: 1 MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRF---SPGARLLDKQRMISAKAYGKQLLLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHT-----------------SCAKPIKNPQHN--------- 97 E N + VHLG+ G++ + +K P Sbjct: 58 FENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGA 117 Query: 98 -HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIY 155 + + + + + + + + + LGP+P N Sbjct: 118 SWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNR 177 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 K N + L+NQ +AGIGNIY E L+R +++P + + P+D L Sbjct: 178 FIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNT------IPEDTLK 231 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ + +L I G + + G VY PC S C I + Sbjct: 232 RIWDDWTVLLKCGIKTGQMITM-----NKAPG-----HWVYNHHKSPC-SVCFHPIDCVN 280 Query: 276 QAGRSTFYCTYCQ 288 AGR ++C CQ Sbjct: 281 VAGRKLYWCVVCQ 293 >gi|124003723|ref|ZP_01688571.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] gi|123990778|gb|EAY30245.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] Length = 294 Score = 83.1 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 97/285 (34%), Gaps = 36/285 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ R NL T+ +H A G+ + V R K L Sbjct: 1 MPELPDLQVFRSNLQKRFVGKTLQMFTVHNPKKLNTSEEKCKQALEGQWLKSVKRHGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E I VHL + G F+ + + ++ + Sbjct: 61 FFEFNNKEVIGVHLMLKGQFVELPHYQPTNL-------------------ILALHFDGGK 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 D + + PP L +K+ L++QKIV GI Sbjct: 102 GLAITDSMSLTRITLNPPSPQAPDALDLEFNIKYLLNTLHKNTKVPVKSFLMDQKIVRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN YV E LW AK+SP + P+ + +L + I++ + G + Sbjct: 162 GNAYVDEILWEAKISPFSHC------DQIPESAVRELHRHIKQ-----VLKNGETQIKIS 210 Query: 241 HIDGSIGYFQNAFSVYG--KTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ ++ KT P G I R T+Y Sbjct: 211 HPDIIAGEIRDFMKIHHPDKTHSPT----GADILIQKLNKRKTYY 251 >gi|311740895|ref|ZP_07714722.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] gi|311304415|gb|EFQ80491.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] Length = 272 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 98/299 (32%), Gaps = 44/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + + G V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMAGREVTGCSVR-------VPRYATVHLDGMVCERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + HL M G++ I + + K + + L N R I Sbjct: 53 FMQ-FDQAIVHTHLKMEGTWAIHYAGD-RWRKPGHTARIVLQLAN-----SPRDIEVVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + GF+D+ +Q L + + ALL+QK+VAGI Sbjct: 106 QLGFVDIYPADHYHQRIAHLG-PDILDPEWDREEALRRLNSRPQRAIGAALLDQKVVAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y EA + A + P + I +I + ++ A + V Sbjct: 165 GNEYRAEACFLAGVHPATPVAEVDTAR----------ILDISRRIMWANRTSPVRVTTGV 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C CG I + G R ++C +CQ Sbjct: 215 RRAGETTY------VFGRNRKRC-RRCGTFIIKGALGGVDQGGDEGELERIIWWCPHCQ 266 >gi|302539979|ref|ZP_07292321.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457597|gb|EFL20690.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 289 Score = 82.7 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 90/248 (36%), Gaps = 12/248 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L + + + L+ P A G+ + R K+ Sbjct: 1 MPELPEVEALAGILADRAVGREIARVLPVAVSVLKTYDPP--LTALEGRTVTAAGRHGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + ++VHL +G + P + + L + + + Sbjct: 59 LDL-ATDGPHLVVHLARAGWLRWKDGLPEAPPRPGRGPLALRLLLSGPERSGFDLTEAGS 117 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + V + P + LGP+P D +F +K L +Q ++AG Sbjct: 118 RKGLAVYCVR--DPGEVPGIARLGPDPLDGAFTREAFAGLLRGVRHRIKGVLRDQSVIAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP R L + + L + + L DA++ Sbjct: 176 IGNAYSDEILHAARMSPYRLASDLTEEE------IAVLYEVMGATLRDAVERSRGLAAGD 229 Query: 240 VHIDGSIG 247 + + G Sbjct: 230 LKTEKRSG 237 >gi|301345446|ref|ZP_07226187.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595027|ref|ZP_07240035.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 71 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDN-VQKLVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIV 72 L E E + + Sbjct: 59 LAEFEQDQMLWH 70 >gi|269956039|ref|YP_003325828.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304720|gb|ACZ30270.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 278 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 93/302 (30%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE +++ L + + LR+ A G+ + + K+ Sbjct: 1 MPEGDVLKLTAERLGAALGGAPLVRAE-----LRWPGIAG--ADLCGRTLRESVAYGKHT 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC--AKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + ++ HL M GS+ + T A + + Sbjct: 54 LLRFDDGRTLHTHLRMDGSWQVRRTGARDAAGRSPAVRAVLATETWTCLGWHLGMMDLVR 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G + + + + A + ALL+Q+ VA Sbjct: 114 TRDEGMLIGHLGPDVLAPDFVGAPATDGRFDDGAAEGTRRLAVDPARPVCVALLDQRTVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+G I+ E+L+ +L P P + L+ +++ ++ Sbjct: 174 GLGTIWTAESLFAERLWPWTAVGE------LPTGRVRALLLTAARLVRGSV--------- 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYC 287 + G V+G+ PC+ CG I AG R ++C C Sbjct: 219 --AVGRRQGLGAVERRVHGRHHRPCV-RCGTPIALGSTAGPDVRPDQGALERVVYWCPVC 275 Query: 288 QK 289 Q+ Sbjct: 276 QR 277 >gi|88854733|ref|ZP_01129399.1| DNA glycosylase [marine actinobacterium PHSC20C1] gi|88815894|gb|EAR25750.1| DNA glycosylase [marine actinobacterium PHSC20C1] Length = 272 Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 94/306 (30%), Gaps = 51/306 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + G+ + V R K+L Sbjct: 1 MPEGDSVYKAAAKLRAALDGQVLTRTDFR-------VPAFATLDLSGQTVTSVVPRGKHL 53 Query: 61 LIELEGN------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LI + + +I HL M G + I V + + Sbjct: 54 LIRVAEDADASSSREPGSGHTIHSHLKMEGVWQIYANGERWRKPAYLARAVLSTASKTAV 113 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + ++ P + P + + L + + Sbjct: 114 GFELGLLEVVPTASEDSIVGHLGPDLLGP-----------DWDADLALANLLSDPARPVA 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+ +AG+GN+Y E + P + +L+ K + Sbjct: 163 LALLDQRNLAGLGNVYANELSFLRGFRPDTPIGEVADP--------KRLVALAHKAISV- 213 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFY 283 + R ++ G ++ + V+G+ G+ CL CG I R T++ Sbjct: 214 -----NKDRPIRNLTGLP-RGKSRYWVHGRRGDACL-RCGTRIESAQLGTGPTDTRFTWW 266 Query: 284 CTYCQK 289 C CQK Sbjct: 267 CPSCQK 272 >gi|255324812|ref|ZP_05365925.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] gi|255298112|gb|EET77416.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] Length = 272 Score = 81.9 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 98/299 (32%), Gaps = 44/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + + G V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMAGREVTGCSVR-------VPRYATVHLDGMVCERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + HL M G++ I + + K + + L N R I Sbjct: 53 FMQ-FDQAIVHTHLKMEGTWAIHYAGD-RWRKPGHTARIVLQLAN-----SPRDIEVVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + GF+D+ +Q L + + ALL+QK+VAGI Sbjct: 106 QLGFVDIYPADHYHQRIAHLG-PDILDPEWDREEALRRLNSRPQRAIGAALLDQKVVAGI 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y EA + A + P + I +I + ++ A + V Sbjct: 165 GNEYRAEACFLAGVHPATPVAEVDTAR----------ILDISRRIMWANRTSPVRVTTGV 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C CG I + G R ++C +CQ Sbjct: 215 RRAGETTY------VFGRNRKRC-RRCGTFITKGALGGVDAGGDEGELERIIWWCPHCQ 266 >gi|297162473|gb|ADI12185.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 81.9 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 36/268 (13%) Query: 24 TDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 + + LR G++ R K+L+ +G ++++H GM+G Sbjct: 2 ERVEVSDAGVLRGVTAQRLRRELTGRRFDPPERHGKWLIARTDGP-TVLLHFGMTGDLTC 60 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 H+ VTI L + + + Y D R+ + L T Sbjct: 61 HAHDDP----PHPHDRVTIVLDDGHD-----LRYRDQRKLRGLWLAATDADLDRILGDQG 111 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 + + + ++ +K L +Q +VAG+GN+ E LWRA ++P R+T Sbjct: 112 PDALSVSRAELD---KRLAGRHGRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDE 168 Query: 203 LIQNNGTPKDILYK--LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 L T + + L+ +Q + + + RD Sbjct: 169 LTPEERTRLERAMRGVLLTSVQAGHVPTSPSWLTGRRDDPD------------------- 209 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 P CG +RR AGR+T +C +CQ Sbjct: 210 -PHCPRCGGPLRRSRMAGRTTAWCPHCQ 236 >gi|184199953|ref|YP_001854160.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580183|dbj|BAG28654.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 335 Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 106/352 (30%), Gaps = 84/352 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L ++ + P ++ G+ ++ V R K++ Sbjct: 1 MPEGDSVYRQCKMLREALEGAVIESSDFR-------VPALATSDVSGRTVVAVVPRGKHI 53 Query: 61 LIELE------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT---- 104 LI L L++ HL M G++ + P + Sbjct: 54 LIRLSAAPDAEQMKSGAEPLTLHSHLMMDGTWRVFDRQQDDAAARPGGRRSRPGASPYRP 113 Query: 105 ---------------------------NNTNTKKYRVI--YNDPRRFGFMDL--VETSLK 133 ++T + + + F D+ V T L+ Sbjct: 114 RGQARKGGSVRSAAEARTRLSADVAIGQGSHTIRAILRTKEVEAVGFDVKDVRLVPTRLE 173 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 Q + L + + + AL++Q+ +AGIGN+Y E L+ + Sbjct: 174 DQELVGYLGPDILGPDWDLEKALERLSAQPDRAIGTALMDQRNLAGIGNVYRVETLFMTR 233 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 +P + SL + +L + + K R G + F Sbjct: 234 TNPWARVDSLPEGKLREIVVLAHKLLHLNKD------------RSMRSTVGQAPPGRPLF 281 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAG-----------------RSTFYCTYCQ 288 YGK G+PC CG ++R R+ +C CQ Sbjct: 282 WAYGKDGQPC-RRCGTQLKRGEIDDALLTVDPAPSRTAVQHLRTIAWCPRCQ 332 >gi|317473256|ref|ZP_07932552.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] gi|316899250|gb|EFV21268.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] Length = 273 Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 94/291 (32%), Gaps = 28/291 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRRAKY 59 LPE L +K + +F + G+K++D + Sbjct: 4 LPEALARADELKSELKGKRAEKVWPPSSPHKFCWFNGEASSYDDMLSGRKVVDAQGFGIF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 I EG+L + + G++ + P + I ++ T +Y Sbjct: 64 AEIIFEGDLRVCFNDGVNVRIF------GEGDNIPGKYQLRIDFSDGTVLVFTVAMYGSI 117 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 E + + F + N + K L ++ + G Sbjct: 118 ACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAK----PNLSAKAFLATKQRIPG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN + + L+ A + P +K S ++ L I++VL + + G Sbjct: 174 LGNGVLQDILFEAGIHPKKKIGSFTEHEK------ELLFVSIKEVLSEMVRLRGRDTE-- 225 Query: 240 VHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ + Y K G CG I + G + ++C CQ Sbjct: 226 KDLWGNPGGYKTKLSKNTY-KDG---CPKCGGEITKAAYLGGTVYFCPECQ 272 >gi|239931280|ref|ZP_04688233.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291439653|ref|ZP_06579043.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291342548|gb|EFE69504.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] Length = 278 Score = 81.2 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 97/303 (32%), Gaps = 45/303 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP----HHFSAATRGKKIIDVSRRAKY 59 +PE I R HR LR P + + K+ Sbjct: 1 MPEGHTIHRLAEDY------AAAFAHRAPLRVTSPQGKFADAATLLDRTPLHTTDAHGKH 54 Query: 60 LLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L + E + +HLG+ G P + V + L +T+ Sbjct: 55 LFLGFGDPDPEHPEHTEWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLAGDTSYAD 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 R G + + LGP+P + + + + + L Sbjct: 110 LR---------GPTTCALITDAEKQAIHDRLGPDPLRPDADPAAAYRRIGRSRTTIAALL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++QK++AG+GN+Y E L+R ++ P R R + + ++ ++ + + Sbjct: 161 MDQKVIAGVGNVYRAEVLFRHRIDPYRAGRDITPAEWD------AIWSDLVVLMREGVRT 214 Query: 232 GGSSLRDYVHIDGSIGYFQN------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 H ++G VY + PC CG IR A + F+C Sbjct: 215 NRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRAPLPC-HVCGGEIRTADLAACNLFWCP 273 Query: 286 YCQ 288 CQ Sbjct: 274 TCQ 276 >gi|32477685|ref|NP_870679.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32448239|emb|CAD77756.1| probable formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 294 Score = 81.2 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 89/285 (31%), Gaps = 25/285 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + + RF + A G+ + V K+L E Sbjct: 34 MPEGHKTHYLAREHNQRYAGERLDVSSPQGRF---SDGARAVSGRVLESVRAAGKHLFYE 90 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EGN + VHLG GS++ + P+ + L + T + Sbjct: 91 FEGNRIVHVHLGRYGSYV-------EQTSPPEPPQGQVRLRAISPTHTLDLR-------- 135 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + + + + LL+Q IVAG+GNI Sbjct: 136 GPSQCRLIDSEVQKSICDSLGPDPLSGGKKTEVWSAISASGKPIGGLLLDQSIVAGVGNI 195 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + EAL+ L P L + T L++ ++ L ++ + Sbjct: 196 FRAEALFETGLDPHIPGNKLSPDQFTRLW--KSLVKMMKLGLKHGRIITVTAKEAGKPLK 253 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G F +YGK C CG I A R +C CQ Sbjct: 254 ELAGN--ERFRIYGK--MDC-PQCGGSIAVDSVASRKMHWCPECQ 293 >gi|213581866|ref|ZP_03363692.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 63 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIE 63 L+E Sbjct: 60 LLE 62 >gi|134102322|ref|YP_001107983.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] gi|291003716|ref|ZP_06561689.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] gi|133914945|emb|CAM05058.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] Length = 262 Score = 80.8 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 89/279 (31%), Gaps = 38/279 (13%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 + + L L G+ + +V K+LLI +G+ ++ HL Sbjct: 2 HEALAGEVLVRGELRHPRL-------AEVDLAGRTVREVRPAGKHLLIRFDGDRTLHSHL 54 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 M G++ + + P H I T + + + R G + Sbjct: 55 RMDGAWHVYSPGA--RWRRPGHQARAILATEQRSAVGFNLHDLHLLRTGDERRLIGH--- 109 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 L D S + + + + ALL+Q +VAG+GN+Y E + Sbjct: 110 ---LGPDLLSPDWDESAALEAVRRLTAEPDREIGLALLDQSVVAGVGNLYKTEVCFLLGS 166 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 +P + L +A S+ D Sbjct: 167 TPWTPVSEVDAAEAVRLSRELLL--------RNAWHPEQSTTGDTRRG--------RTHW 210 Query: 255 VYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 +YG+ CL CG +RR VQ R ++C CQ+ Sbjct: 211 IYGR--RTCL-RCGGAVRRGVQGHGIEERVAYHCPNCQR 246 >gi|325108920|ref|YP_004269988.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] gi|324969188|gb|ADY59966.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] Length = 262 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 96/290 (33%), Gaps = 31/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + + RF + GK++I + K+L Sbjct: 1 MPEGHVIHRIAREQRKHFLQQPLA---VSSPQGRF---SKEARRLNGKQLIGIDAYGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +G + VHLG+ G F +P V + + T+ Sbjct: 55 LYRWQGGATFHVHLGLYGKFRTHEVPLPEPRGA-----VRLRIVGETHGFDLN------- 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G V S + + L LG +P + + + + + LL+Q + AG+ Sbjct: 103 --GPNRCVLISAEEEKKLLSRLGADPLREDADPSASFERIQRSRAAIGTLLLDQSLFAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ E L+ + P R S+ L + + Q + Sbjct: 161 GNIFRSEVLYVLGIHPDRPGNSIETEQ------LQTMWELFQDWFEISAKQNRIVTTREP 214 Query: 241 HIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+ + +Y C CG+ +R R+ + C CQ Sbjct: 215 GSRGSVSKLSREERLHIYKHEN--CGK-CGREVRSWSVGARTAYACESCQ 261 >gi|326330788|ref|ZP_08197089.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951318|gb|EGD43357.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 161 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 13/158 (8%) Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 + LGP+P + + + + + + L++Q ++AG+GN+Y E L+R ++ P+ Sbjct: 1 MVAKLGPDPLRDDADPGRAWLRISRSRTTIGALLMDQSVLAGVGNVYRAEVLFRHRIDPM 60 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN------ 251 R +L + + ++ +++ D ++ H ++G Sbjct: 61 RPGNTLRRQQWD------AIWDDLVELMKDGVEKNRIDTVRDEHTPEAMGRPPRKDDHGG 114 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G+PCL CG +R R+ F+C CQ+ Sbjct: 115 EVYVYRRNGQPCL-VCGTSVRTTELQQRNLFWCPKCQR 151 >gi|300932502|ref|ZP_07147758.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 200 Score = 80.4 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 2/172 (1%) Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 P+ + VE + L P N + + + + + L++QK Sbjct: 30 RGPQWCRLITEVEMEAEIGKLGADPLRPADPLNLELRDEMFRRLARSRRTIASLLMDQKF 89 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 AG+GNIY E L+R ++P + + + L +L+ ++ Sbjct: 90 FAGVGNIYRAEVLFRLGINPETRGDVASERKEEIWEDLVRLMAYGEQHGRIDTVREQ-HQ 148 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G+PCL CG ++ V GR+ F+C CQ Sbjct: 149 PEAMGRAPREDDHGGEVYVYRRAGQPCL-VCGDEVQHAVVEGRNLFWCPKCQ 199 >gi|199594636|gb|ACH90782.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594668|gb|ACH90798.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594670|gb|ACH90799.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 80.0 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRT----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDETFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594560|gb|ACH90744.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 80.0 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ +L + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDHLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|222053400|ref|YP_002535762.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] gi|221562689|gb|ACM18661.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] Length = 259 Score = 80.0 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 103/286 (36%), Gaps = 38/286 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP++ + NL + + + R NLR + P + + + + I V R K Sbjct: 1 MPELPDLTVFAENLGKRVTKKMIRSVTCGR-NLRLNVSPRELAESLQDQVIEGVERWGKE 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + VHL ++G F+I + I ++T+ Sbjct: 60 IRFLLGNGKILHVHLMLTGGFVITGKPDKV-----PFPQLVIGFEDDTSL---------- 104 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + P + A + K L++QK++ G Sbjct: 105 ----VVTDEKAMAMAALDPEKAEASPDALAVTVDELKRLISRFPKAKAKAFLIDQKVMRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A++SP+ L + L ++I VL AI + Sbjct: 161 IGNAYADEILWEARISPLSLMGKLTP------QTIEVLAEKIPAVLQWAIVSI-----KE 209 Query: 240 VHIDGSIGYFQNAFSVYG--KTGEPCLSNCGQMIRRIVQAGRSTFY 283 + + G ++ V+ + P G+ I + A ++T+Y Sbjct: 210 RNPGITAGEIRDFLQVHNPSRKTSPT----GRPIIKEKIAQKTTYY 251 >gi|296085164|emb|CBI28659.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + ++L+ GM+G+ I+ + K ++ + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEW 103 >gi|225430652|ref|XP_002268184.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 216 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + ++L+ GM+G+ I+ + K ++ + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEW 103 >gi|199594604|gb|ACH90766.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I DV RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDVRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594588|gb|ACH90758.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594592|gb|ACH90760.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594600|gb|ACH90764.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594620|gb|ACH90774.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594624|gb|ACH90776.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594644|gb|ACH90786.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594650|gb|ACH90789.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594584|gb|ACH90756.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594602|gb|ACH90765.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594614|gb|ACH90771.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594642|gb|ACH90785.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594652|gb|ACH90790.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + T + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPTGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594630|gb|ACH90779.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594646|gb|ACH90787.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594532|gb|ACH90730.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594534|gb|ACH90731.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594538|gb|ACH90733.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594542|gb|ACH90735.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594622|gb|ACH90775.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEGFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594638|gb|ACH90783.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N ++ +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----QLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594536|gb|ACH90732.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594540|gb|ACH90734.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594544|gb|ACH90736.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594546|gb|ACH90737.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594548|gb|ACH90738.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594550|gb|ACH90739.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594556|gb|ACH90742.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594558|gb|ACH90743.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594562|gb|ACH90745.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594564|gb|ACH90746.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594568|gb|ACH90748.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594570|gb|ACH90749.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594572|gb|ACH90750.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594574|gb|ACH90751.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594576|gb|ACH90752.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594580|gb|ACH90754.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594582|gb|ACH90755.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594648|gb|ACH90788.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594654|gb|ACH90791.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594656|gb|ACH90792.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594658|gb|ACH90793.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594662|gb|ACH90795.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594664|gb|ACH90796.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318226|gb|ADK67028.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas sp. DSM 2408] gi|301318228|gb|ADK67029.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas rhizophila] gi|301318230|gb|ADK67030.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas koreensis] gi|301318236|gb|ADK67033.1| DNA-formamidopyrimidine glycosylase [Pseudoxanthomonas dokdonensis] gi|301318240|gb|ADK67035.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318242|gb|ADK67036.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318244|gb|ADK67037.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318246|gb|ADK67038.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318250|gb|ADK67040.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318254|gb|ADK67042.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318256|gb|ADK67043.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318258|gb|ADK67044.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318262|gb|ADK67046.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318264|gb|ADK67047.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318266|gb|ADK67048.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas chelatiphaga] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594632|gb|ACH90780.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALGS-AVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|300858055|ref|YP_003783038.1| hypothetical protein cpfrc_00637 [Corynebacterium pseudotuberculosis FRC41] gi|300685509|gb|ADK28431.1| hypothetical protein cpfrc_00637 [Corynebacterium pseudotuberculosis FRC41] gi|302205777|gb|ADL10119.1| Putative endonuclease VIII [Corynebacterium pseudotuberculosis C231] Length = 257 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 89/278 (32%), Gaps = 34/278 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ V + P A G+ + V K L +++ + HL M Sbjct: 1 MEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNLFMQIGE-DILHTHLKME 52 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 G++ + P H L + T K+ + F + Sbjct: 53 GAWAVYRKGD--RWSKPAHTARVQLLLDGTPQKRSIEVVGFSLGFVRIFPACDYPGAIAH 110 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 + + +N+ ++ + + A+L+Q+ +AG+GN Y E + + P Sbjct: 111 LGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRNLAGVGNEYRAEICFLCGVHPA 170 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 + R + + + + + + + + ++ V+G Sbjct: 171 TRVRDVDVDR------ILLITRRLMWANRLSTVRVTTGIKRLGETT----------YVFG 214 Query: 258 KTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 + +PC CG I + R ++C +CQ Sbjct: 215 RNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 251 >gi|199594596|gb|ACH90762.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|301318232|gb|ADK67031.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas humi] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P G++I + RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPAEIEQQLPGQRIEAIRRRAKYLLLDTDVGS-ALLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLEDGR-----LLRFNDPRRFGCLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D+ F+ YL H+ +++ +K L++Q+IV G+GNI Sbjct: 109 ELLRELGPEPLDDVFDGDYLFHRSRGRSAAVKTFLMDQRIVVGVGNI 155 >gi|220936333|ref|YP_002515232.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Thioalkalivibrio sp. HL-EbGR7] gi|219997643|gb|ACL74245.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Thioalkalivibrio sp. HL-EbGR7] Length = 270 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 93/294 (31%), Gaps = 35/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + L ++ + L R P ++ V+ K+L Sbjct: 1 MPEGDTLHKLAKALQPRLQGQAIRLTRLRGVPPRTPLPEG--------RVESVTAEGKHL 52 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 LI G + HLG+ G + K + V + + + Sbjct: 53 LIRFTGEEGGAQVLRTHLGLWGGWHQYAPGEP-WRKPARQAWVVLQADD------AVFVC 105 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + R M + L + + + L + LL+Q++ Sbjct: 106 FNAREVEVMSAGGVRRRGLTARLGPDLLGADVDLAALPARAREILPGEAPLVDVLLDQRV 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +GIGN+Y E L+ L+P+ ++ L + +L + G + Sbjct: 166 ASGIGNVYKSELLFLLGLAPLTPLEAVSDETLVAAYALAR------DLLSRNLGYGPRTT 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 R G VYG+ CL C IR R T++C CQ Sbjct: 220 RFEADGHG-------RLWVYGRRDVHCLK-CASAIRYARLGRDQRGTYWCPNCQ 265 >gi|199594594|gb|ACH90761.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLRGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594608|gb|ACH90768.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318248|gb|ADK67039.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318260|gb|ADK67045.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGSYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594566|gb|ACH90747.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV IS+ N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISMDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594628|gb|ACH90778.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|301318238|gb|ADK67034.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGQI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594586|gb|ACH90757.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594606|gb|ACH90767.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594634|gb|ACH90781.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594612|gb|ACH90770.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL+E S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVTELLPGQRIEDIRRRAKYLLLET-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|289670026|ref|ZP_06491101.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 51 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 22/50 (44%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE R L + + + L R +LR+ P G I Sbjct: 1 MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAII 50 >gi|199594554|gb|ACH90741.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594626|gb|ACH90777.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFSRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594552|gb|ACH90740.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDT-AVGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D+ F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDVFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594618|gb|ACH90773.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas acidaminiphila] Length = 155 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P A G++I + RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPPDIERALPGQRIAAIRRRAKYLLLDTDAGS-ALLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLEDGR-----LLRFNDPRRFGCLLWQPPGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D +F+ YL + +++ +K+ L++Q+IV G+GNI Sbjct: 109 ELLRGLGPEPLDAAFDGDYLFARSRGRSAPVKSFLMDQRIVVGVGNI 155 >gi|301318234|gb|ADK67032.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas terrae] Length = 155 Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 + + + + L R +LR+ P G++I + RRAKYLL++ E ++HLGM Sbjct: 1 HLVDRRIHGVILRRPDLRWPIPAEIEQLLPGQRIEAIRRRAKYLLLDTELGS-AVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLEDGR-----LLRFNDPRRFGSLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D F+ YL + + + +K L++Q IV G+GNI Sbjct: 109 ELLRDLGPEPLDADFDGDYLFQRSRGRKAPIKTFLMDQGIVVGVGNI 155 >gi|320534790|ref|ZP_08035210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320132993|gb|EFW25521.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 138 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + ++ L++Q ++AG GNIY E L+R +SP R + + L Sbjct: 8 FVAKARSRRKSIGELLMDQAVIAGAGNIYRAETLFRVGISPFRAGNRISEER------LR 61 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVYGKTGEPCLSNCGQMIR 272 + ++++ ++ + G + D + + + VY +TG PCL CG + Sbjct: 62 AIWEDLRPLMEYGVATGFITTVDLDDVPAPLPPDDPEAGRWYVYHRTGRPCL-RCGTPVA 120 Query: 273 RIVQAGRSTFYCTYCQ 288 A R F+C CQ Sbjct: 121 EREVASRRLFWCPTCQ 136 >gi|323451651|gb|EGB07527.1| hypothetical protein AURANDRAFT_14007 [Aureococcus anophagefferens] Length = 261 Score = 78.9 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 88/291 (30%), Gaps = 38/291 (13%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 E V + + T N RF +A GK+ + K L Sbjct: 3 EGHSVHRVATRHRSKLVGKT---FRASSPNARF---AEGAALIDGKEFAGIEAVGKNLFA 56 Query: 63 ELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + VH GM+G++ + + T T + R+ + Sbjct: 57 WFGSGADEVCVHVHFGMAGNWAVFDAADEP---------------ETTATTRLRLAGHGV 101 Query: 120 RRFGFMDLVETSLKYQYPPLRTLG--PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 V + + +P + + L + ++ +++Q Sbjct: 102 VSHLSAMTVAHGTRDGLYAEKRRKLGEDPLRDDADPERLWGKVAASKKSIGALVMDQSCF 161 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G GNIY E L++A + P R SL ++ + ++L G Sbjct: 162 TGPGNIYRAEILFKAGVHPDRPGNSLSRDEFD------LIWHHTVELLKRGYATGSILTV 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D Y Q +Y K C CG + A R+ + C CQ Sbjct: 216 DKEDERK---YGQIRRYIYNKA--KC-PKCGSRVVSWDIAARTAYACETCQ 260 >gi|199594590|gb|ACH90759.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 78.9 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 +++ V + L R +LR+ P + G++I DV RRAKYLL++ S ++HLGM Sbjct: 1 HLQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIEDVRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGQV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|297181460|gb|ADI17648.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium HF0130_20P23] Length = 261 Score = 78.5 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 92/285 (32%), Gaps = 28/285 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF ++ G+ I V K+LL Sbjct: 1 MPEGHTIHRAARDHRRIFAKCALEVESPQGRF---SEGASILSGQLCITVEAFGKHLLYR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + NL++ +HLG+ G KP + + G Sbjct: 58 FDNNLALHIHLGLFGRIRKHKLPLQKPR--------------GAVRVRLIGRTHAVDING 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + +GP+ + N + K + +++Q ++AGIGNI Sbjct: 104 PTICRVLDSNAVTTLINRIGPDVLRSDSNPELAFAKITKSKVPIGQLIMDQSVMAGIGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E LWR + P R + + L E + +L + D Sbjct: 164 YRSEILWRQSVHPETPGREINRETFDQ------LWDEAKALLKIGVKHNAIITVD--TAK 215 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S ++ +++ K C IR +GR F C CQ Sbjct: 216 PSKTRYKERVNIFAKDQ---CPRCKNEIRCFEISGRRAFVCDICQ 257 >gi|319948434|ref|ZP_08022571.1| formamidopyrimidine-DNA glycolase [Dietzia cinnamea P4] gi|319437893|gb|EFV92876.1| formamidopyrimidine-DNA glycolase [Dietzia cinnamea P4] Length = 269 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 84/277 (30%), Gaps = 43/277 (15%) Query: 30 RKNLRFDFPHHFSAATRGKKIIDVSRRAKYL------LIELEGNLSIIVHLGMSGSFIIE 83 R LR P + RG+ + R K+L + +++ +HL M G + Sbjct: 3 RTELR--VPRFAAVDLRGRTVEAARSRGKHLLVVVGPDGQGRDPVTLHIHLKMEGRIHVL 60 Query: 84 HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG 143 + + P H V + L V+ + + E ++ L Sbjct: 61 RAG--ERWRFPAHT-VRLVLRAGDT----EVVGTELGLLRALTPAEADGAVEHLGPDLLD 113 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 + + A + + + ALL+Q+ +AGIG IY E + + P Sbjct: 114 ADWDPVASTAEAVRRIRERPGRTIGEALLDQRNLAGIGTIYRAELCFLRGVDPRDPVEVG 173 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 T L+ +V V + VYG+ G PC Sbjct: 174 PDLGATVTLARKMLVANANRV---------------VRVTTGETRRGRELWVYGRDGRPC 218 Query: 264 LSNCGQMIRRIVQAG------------RSTFYCTYCQ 288 CG + G R + C CQ Sbjct: 219 -RRCGTRVETFRLGGLADPHEPSDSPDRIAYRCPSCQ 254 >gi|199594610|gb|ACH90769.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P A G+ I V RRAKYLL++ S ++HLGM Sbjct: 1 HLEGRRVHGVILRRPDLRWPIPDEIGALLPGQAIEGVRRRAKYLLLDT-AIGSALLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + + + +K L++Q IV G+GNI Sbjct: 109 ELLAGLGPEPLDDAFDGDYLFQRSRGRKAPVKTFLMDQGIVVGVGNI 155 >gi|199594578|gb|ACH90753.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 78.1 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 +++ V + L R +LR+ P + G++I + RRAKYLL++ S ++HLGM Sbjct: 1 HLQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIGGIRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRP----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGQV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594616|gb|ACH90772.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas nitritireducens] Length = 155 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P G++I + RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPAEIERELPGQRIAAIRRRAKYLLLDTDAGS-ALLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLEDGR-----LLRFNDPRRFGCLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D++F+ YL + +++ +K L++Q+IV G+GNI Sbjct: 109 ELLRALGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQRIVVGVGNI 155 >gi|296118291|ref|ZP_06836872.1| endonuclease VIII [Corynebacterium ammoniagenes DSM 20306] gi|295968849|gb|EFG82093.1| endonuclease VIII [Corynebacterium ammoniagenes DSM 20306] Length = 291 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 93/299 (31%), Gaps = 38/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + ++ G +V K+L Sbjct: 1 MPEGDSVLQLSNKL-QFMVGRQVTRTSIR-------VPRYATSTFTGDYCENVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + HL M G + I + K K ++L N T + + Sbjct: 53 FMQFGEQ-ILHTHLKMEGQWSIHYAGD-KWRKPGFTARAVLNLAN---TPRDIELVGHSL 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + + E + L + + ++ ALL+Q VAGI Sbjct: 108 GHVEVYPIANYYDRIADLGPDILDEQWEEYGRDEALQRILSRPHRSIGAALLDQHNVAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y EA + A + P S+ + + ++ A + V Sbjct: 168 GNEYRAEACFIAGIDPRDSVESIGVTRVESVVDISR-------KIMWANKDSPVRVTTGV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 G Y V+G+ + C C I G R + C +CQ Sbjct: 221 RRAGETTY------VFGRNNQRC-RRCTTTIYTDRLGGPDAGGEDGELERIIWVCPHCQ 272 >gi|317184406|gb|ADV15626.1| putative formamidopyrimidine DNA glycosylase [Candida orthopsilosis] Length = 394 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 108/368 (29%), Gaps = 92/368 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----------FSAATRGKKI 50 MPE+ EV + L + + + L L F + G +I Sbjct: 1 MPEVAEVAHVCALLKRNVLGFKIKKVNLSLDPLLFPVLKESTDPNAELEMMRSKLVGSRI 60 Query: 51 IDVSRRAKYLLIELEGNLSII-----VHLGMSGSFIIEHTSC------------------ 87 V R KY + L +H GM+G I + Sbjct: 61 DSVGRHGKYFWLRLTKEGVPKSSVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKILRELS 120 Query: 88 -----------AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY-- 134 P+ + + L + K + + DPRR G + L+ Sbjct: 121 EPKKEGVMKVEPDTEWPPRFSKFEMDLVIDD--FKLELSFVDPRRLGRVRLITDRKAETD 178 Query: 135 --------------------------QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + K +K Sbjct: 179 EGLLQLPPLDALGPDYSKSEVETKVSDFVFGDPDPHHHGRPRLDLRGFNELILSKKKAIK 238 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD-ILYKLIQEIQKVLID 227 + LL+Q AG+GN E L+ AKL P S I+ N + ++ +L + + V + Sbjct: 239 SLLLDQAYFAGVGNWVGDEVLFHAKLHPNEIISSKIERNSGNINPVIERLYESLIYVCEE 298 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE------PCLSNCGQMIRRIVQAGRST 281 A+ G S + F + + + + G+ + G ++ I GR++ Sbjct: 299 AVKCEGDSKK-----------FPSHWLMLHRWGKARKSQGKAKTKEGFILDHITVGGRTS 347 Query: 282 FYCTYCQK 289 + Q+ Sbjct: 348 CFAPEVQR 355 >gi|326382819|ref|ZP_08204509.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] gi|326198409|gb|EGD55593.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] Length = 231 Score = 77.7 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 9/150 (6%) Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGP+P + + + + + L++QK++AG+GNIY E L+RA + P R Sbjct: 88 RLGPDPLRDDADPEVAWKAISRSRRPIGSLLMDQKVIAGVGNIYRAEVLFRAGVEPHRPG 147 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGK 258 ++ ++ ++ ++ ++ + G + +G+ Y + VY + Sbjct: 148 SAVTRDEFD------EMWADLLHLMPIGVRRGHIHVVRPEDDNGAPAYASDRPRTYVYRR 201 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+PC CG I GR+ F+C CQ Sbjct: 202 AGDPC-RLCGAPIAWEEMEGRNLFWCPSCQ 230 >gi|255017643|ref|ZP_05289769.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-515] Length = 83 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII 82 LL +L +I+ HL M G F + Sbjct: 61 LLFDLTNC-TILSHLRMEGKFRL 82 >gi|108761725|ref|YP_633136.1| formamidopyrimidine DNA-glyxosylase [Myxococcus xanthus DK 1622] gi|108465605|gb|ABF90790.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Myxococcus xanthus DK 1622] Length = 153 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 11/109 (10%) Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN E+LW+A ++P R SL + +L + IQ VL + + G+ Sbjct: 41 VGNRDADESLWQAGIAPRRLASSLTADEVV------RLDRAIQAVLDEGLRMRGTQ---- 90 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ +V+G+ G PC C + GR+T++C+ CQ Sbjct: 91 RDLFGVQGQAKHRRNVFGRAGAPC-PRCATPVSHQRIGGRNTYWCSSCQ 138 >gi|199594598|gb|ACH90763.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ ++ + L R +LR+ P S G+ I V RRAKYLL++ S ++HLGM Sbjct: 1 HLEGRSIHGVILRRPDLRWPIPPEISEQLPGQAIEAVRRRAKYLLLDT-AIGSAVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPVRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGE--TH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + +++++K L++Q IV G+GNI Sbjct: 109 ALLAGLGPEPLDDAFDGDYLFARSRGRSASVKTFLMDQGIVVGVGNI 155 >gi|213028695|ref|ZP_03343142.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 162 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 16/166 (9%) Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ---FHKKNSNLKNALLNQKIVAGIGNI 183 ++ +P L+ +GP+ D + + +N LL+Q +AG+GN Sbjct: 10 MLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGNY 69 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E LW+ L+ K + L + L L + + + + R + Sbjct: 70 LRVEILWQVGLTGQHKAKDLNEAQ------LNALSHALLDIPRLSY-----TTRGQADEN 118 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 119 KHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 162 >gi|198282763|ref|YP_002219084.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667882|ref|YP_002424959.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247284|gb|ACH82877.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520095|gb|ACK80681.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 267 Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 107/290 (36%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E++R+ L + + V + + D AA +G+ I D+ R + Sbjct: 1 MAELPEIELLRQKLRRNILHKRVGVMQMQNAKGEALPDGAGIKDAALKGRAITDLHRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL +EL+ + + LG S +E + I + R+ + Sbjct: 61 YLFLELDRKDILALQLGGELSGELERGPVHGEGGEEPRAALEIQINGQQ-----RLRFQG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + +++ + + + L ++ S L+N LL+ Sbjct: 116 TQLGNRLRMLDENSDVD-FLTKLGPDPLMVHGEGLGILREALSRRRSALRNILLDDTFAP 174 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIG I+ E L++A+L P R SL + + +++I KVL A+ + Sbjct: 175 GIGGIWADEILFQARLRPDRTATSLSEEER------ERFLEQIPKVLDRAVRCQAKTN-- 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F + C +CG + + G++ C CQ Sbjct: 227 ---------LLPKTFLTRHREDGHC-PSCGGALETLSVGGKNAMLCPACQ 266 >gi|199594660|gb|ACH90794.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594666|gb|ACH90797.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318252|gb|ADK67041.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I V RRAKYLL++ ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYLLLDTAAGS-AVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594640|gb|ACH90784.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 76.6 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALGS-AVLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPLRA----HDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEIHP- 109 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 -LLLGLGPEPLDAAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|255077513|ref|XP_002502394.1| DNA glycosylase [Micromonas sp. RCC299] gi|226517659|gb|ACO63652.1| DNA glycosylase [Micromonas sp. RCC299] Length = 447 Score = 76.6 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 94/287 (32%), Gaps = 33/287 (11%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI---- 62 V + + + T N RF H + GK++ V K L Sbjct: 7 VHRVAASARRHLVGKRFTA---TSPNGRF---AHGAEVIDGKELKRVDAIGKNLFYFFNE 60 Query: 63 -ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + VH GMSG F HT + L + + + Sbjct: 61 ADGPDAHVMHVHFGMSGRFSTHHT----LPGPEPGATTRLRLESREHGICALLSAMTVEL 116 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 LG +P +A L +F + ++ AL++Q + AG+G Sbjct: 117 GDISLFQTK--------RAKLGEDPLREDADADRLWEKFTRSRKSVGLALMDQAMFAGVG 168 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L++A + P + P+ ++ + ++L G D Sbjct: 169 NIYRAEILYKAGVHPEQPCAD------LPRPAFDEVWRHSVELLQRGFVTGSILTVDP-D 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + C CG ++ A R+ + C CQ Sbjct: 222 EAKTLGEPWTRRYVYNQ--RSCG-RCGSAVKTWDMAARTVYCCEVCQ 265 >gi|168705539|ref|ZP_02737816.1| Formamidopyrimidine-DNA glycolase [Gemmata obscuriglobus UQM 2246] Length = 100 Score = 76.2 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 40/79 (50%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ +T + LR + ++AA G ++ V RR K++ Sbjct: 1 MPELPEVETVVRDLRPLLTGRVITAVRRSAFKLRRTWNPAWAAALAGTRVEAVRRRGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGS 79 L++LE + G Sbjct: 61 LVDLECKADPPPNPLPEGR 79 >gi|220916970|ref|YP_002492274.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954824|gb|ACL65208.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-1] Length = 278 Score = 76.2 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 97/295 (32%), Gaps = 28/295 (9%) Query: 1 MPELPEVEI---IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE R L + V L A G+ + Sbjct: 1 MPEGD---TLARAARALHRALAGKPVVRFETVLPRLARVAAD---APVVGRTVERAEAVG 54 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LL+ L G L + HL M+GS+ + + V ++ Sbjct: 55 KHLLLHLSGGLVLRTHLRMNGSWHLYRPGAPWRRPASAMRVLLEVPD------AVAVAFD 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKI 176 P + + + ++ L LGP+ +F+A + + + +AL++Q Sbjct: 109 LP----VAEWLRAADLGRHRALSRLGPDLLSPAFDAAEAERRLRARGGLAVADALVDQAA 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG GN E L+ A +SP R+ L +LI E GG Sbjct: 165 LAGAGNELKSEILFVAGVSPFRRVEDLDDGELRAVIATARRLIGENVPPP----GPGGVE 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + VYG+ G PC CG I Q + T++C CQ Sbjct: 221 TWRGGRRTTRRMNPRERTWVYGRGGRPC-RRCGAPIAFARQGPHAQGTWWCPRCQ 274 >gi|5020105|gb|AAD38025.1|AF148219_3 formamidopyrimidine-DNA glycosylase MutM [Nostoc sp. PCC 8009] Length = 163 Score = 75.8 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 52/150 (34%), Gaps = 28/150 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ L R F G I + RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNQEITGGDVLLERTIAYPFSVGEFINGVEGYAIANWHRRGK 60 Query: 59 YLLIE-----------------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 YL+ E + VHL M+G + H V + Sbjct: 61 YLVAELSQSPQQEDAGSKNFSASPATSWLGVHLRMTGQLLWLDRDEPLHK----HTRVRL 116 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 + + + + D R FG M V Sbjct: 117 FFGD-----RQELRFVDQRTFGKMWWVPPG 141 >gi|213584692|ref|ZP_03366518.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 143 Score = 75.8 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 13/130 (10%) Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 +N LL+Q +AG+GN E LW+ L+ K + L + L L Sbjct: 27 PRFRNRQFSGLLLDQSFLAGLGNYLRVEILWQVGLTGQHKAKDLNEAQ------LNALSH 80 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 + + + + R + G F V+ + GE C CG +I + + R Sbjct: 81 ALLDIPRLSY-----TTRGQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSR 133 Query: 280 STFYCTYCQK 289 ++C +CQK Sbjct: 134 PFYWCAHCQK 143 >gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864] Length = 985 Score = 75.8 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 97/341 (28%), Gaps = 52/341 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPE+E R L++ + V + + L FD P F+ G+ + DV R K Sbjct: 1 MPELPELERARNFLLLTCRGKKVVQVSVDEDTLVFDGVAPQQFAQQFVGRTVRDVKRHGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSF----------------IIEHTSCAKPIKNPQHNHVTIS 102 ++ IE +G H G++G+F + A + + N Sbjct: 61 HIWIEFDGGSDAAFHFGLTGNFFFKSQTSGKVFKAHSGRLPDDDEASEERTQEENERIQE 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + + + P R +D + + E D + +F Sbjct: 121 KQTEQSLRSRGALTPSPYRRARVDFDYQPVDADIDASLSQSEEVHDGHWPPKDSKCEFSF 180 Query: 163 --KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN-----NGTPKDILY 215 ++ + + + + + P+ N P L Sbjct: 181 DDQSRLSFTNTCRLGRIRALADSWAEPPICFLGFDPLTPVEQGAFNAALVRRNVPIKALL 240 Query: 216 K----LIQEIQKVLIDAIDAGGSSLRDYVHI-----------------------DGSIGY 248 L V + + G Y + + Sbjct: 241 LDQSFLAGVGNWVADEVLYQAGIHPEQYTNTLSGEQLAALLDKIQSVVRIAVQLNADPSK 300 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + + + G+ + + GR++ QK Sbjct: 301 YPSDWLYHHRFSKDDQVIGGEKLSFVAVGGRTSALLPSRQK 341 >gi|150865500|ref|XP_001384741.2| hypothetical protein PICST_84240 [Scheffersomyces stipitis CBS 6054] gi|149386756|gb|ABN66712.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 361 Score = 75.4 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 111/361 (30%), Gaps = 77/361 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------PHHFSAATRGK----KI 50 MPE+ EV + L + + + L+ L F P + +G+ I Sbjct: 1 MPEVAEVAHVCAQLRRNVLGYQIASLVLNNDALLFPVLKNASNPEKELQSLQGRLLHSTI 60 Query: 51 IDVSRRAKYLLIELEG-----NLSIIVHLGMSGSFIIEH--------------------- 84 V R KY + +++H GM+G+ I + Sbjct: 61 ESVGRHGKYFWLRTRPVDSKSTDVLLMHFGMTGNIKIRNIGSHLIFLENAGTKEDVVTVE 120 Query: 85 ------TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL------ 132 K + + L + + + + DPRR G + L+ Sbjct: 121 QLQNEENESKKEPEEWPPRFTKMELVLEKDGTRLDLAFTDPRRLGRIRLLTGPGIQADED 180 Query: 133 -----------------------KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + ++ + K +K+ Sbjct: 181 LLNTSPLDALGPDYSKSPNSLKSEKEFVIGDPDPHHHGRPRPTVEEFSKLVLSKKKPIKS 240 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVLIDA 228 LL+Q +GIGN E +++A++ P S I N ++ +L I + ++ Sbjct: 241 FLLDQAFFSGIGNWVGDEVVYQARIHPNEVISSKIPQNLEKVHPVVQRLYDSIIYICEES 300 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ + + +S K G ++ G+ + + GR++ + Q Sbjct: 301 VRVEGNVKKFPSNW-----LMLYRWSKAKKKGPKPTTDDGKALDFVTVGGRTSCFVPELQ 355 Query: 289 K 289 K Sbjct: 356 K 356 >gi|297196039|ref|ZP_06913437.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153040|gb|EFH32113.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] Length = 204 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 14/208 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE R L + + + +H + A +G++ + +R K+ Sbjct: 1 MPELPDVEGFREVLDSCARGKRIERVEVHDAGVLHGVTVARLGRALQGRRFAEPARHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +G ++++H GM+G + H+ V ++L + + + D Sbjct: 61 LLARTDGP-TLMMHFGMTGQLVCCRAGDP----PDPHDRVVLAL------GREELRFRDQ 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L E L GP+ A ++ +K AL +Q ++AG Sbjct: 110 RKLQGLWLAEDPDADVARILHGQGPDALSLDRAA--FKDLLSRRRGRVKAALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +GN+ E LWRA L P R+ L Sbjct: 168 LGNLLADEILWRAGLRPTRRADRLDDAE 195 >gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera] Length = 758 Score = 75.4 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHL 74 + ++L+ Sbjct: 61 NMWLQLDSPPFPSFQF 76 >gi|197122194|ref|YP_002134145.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] gi|196172043|gb|ACG73016.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] Length = 278 Score = 74.6 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 97/294 (32%), Gaps = 26/294 (8%) Query: 1 MPELPEVEI---IRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE R L + V L A G+ + Sbjct: 1 MPEGD---TLARAARALHRALAGKPVVRFETVLPRLARVDAD---APVVGRTVERAEAVG 54 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LL+ L G L + HL M+GS+ + + V ++ Sbjct: 55 KHLLLHLSGGLVLRTHLRMNGSWHLYRPGAPWRRPASAMRVLLEVPD------AVAVAFD 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKI 176 P + + + ++ L LGP+ +F+A + + + +AL++Q Sbjct: 109 LP----VAEWIRAADLGRHRALARLGPDLLSPAFDAAEAERRLRARGGLAVADALVDQSA 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG GN E L+ A +SP R+ L + + + + + GG Sbjct: 165 LAGAGNELKSEILFVAGVSPFRRVEELDEA---ALRAVIATARRLIGENVPPPGPGGVET 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + VYG+ G PC CG I Q T++C CQ Sbjct: 222 WRGGRRTTRRMNPRERTWVYGRGGRPC-RRCGAPIAFARQGPHAHGTWWCPRCQ 274 >gi|289568914|ref|ZP_06449141.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|289542668|gb|EFD46316.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 158 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 37 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 94 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ VY +TG PC CG +R + A +S YC CQ Sbjct: 95 QGAAMLK---------GEKRSGLRVYARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|219556809|ref|ZP_03535885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 160 Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 39 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 96 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ VY +TG PC CG +R + A +S YC CQ Sbjct: 97 QGAAMLK---------GEKRSGLRVYARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|218198635|gb|EEC81062.1| hypothetical protein OsI_23872 [Oryza sativa Indica Group] Length = 422 Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 28/231 (12%) Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L +I HL G ++ T +++ + L + + D Sbjct: 104 HLGQYFPQVADLIGHLSWDGRSVVSSTDD----WPSKYSKFFVQLDDG-----LEFSFTD 154 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRF + L E PP+ LGP+ ++ +K +K LL+Q ++ Sbjct: 155 KRRFARVRLFE--DPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQSFIS 212 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN E L++++ P++ SL + L Q IQ+V+ A+ Sbjct: 213 GIGNWIADEVLYQSRTHPLQIASSLSRE------SCEALHQSIQEVVKYAV--------- 257 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D F + + + G+ GQ I I GR+T Y QK Sbjct: 258 --EVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQK 306 >gi|298524435|ref|ZP_07011844.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|298494229|gb|EFI29523.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 166 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 45 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAIASVLSDAVRRSVG 102 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 103 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|215410531|ref|ZP_03419339.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 160 Score = 73.9 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 39 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAIASVLSDAVRRSVG 96 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 97 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|289744675|ref|ZP_06504053.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] gi|289685203|gb|EFD52691.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] Length = 166 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN + E L AK+SP L T + + + ++ Sbjct: 45 ITDQKVIAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 102 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 103 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|215402744|ref|ZP_03414925.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] Length = 160 Score = 73.5 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN + E L AK+SP L T + + + ++ Sbjct: 39 ITDQKVIAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 96 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 97 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|15840367|ref|NP_335404.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|148822152|ref|YP_001286906.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253800030|ref|YP_003033031.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|254231252|ref|ZP_04924579.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|308231675|ref|ZP_07413410.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308370120|ref|ZP_07420350.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308372976|ref|ZP_07430625.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308379911|ref|ZP_07488077.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|13880533|gb|AAK45218.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|124600311|gb|EAY59321.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|148720679|gb|ABR05304.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253321533|gb|ACT26136.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|308216422|gb|EFO75821.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308325248|gb|EFP14099.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308339239|gb|EFP28090.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308363225|gb|EFP52076.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] Length = 166 Score = 73.1 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 45 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 102 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 103 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|15608084|ref|NP_215459.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|31792133|ref|NP_854626.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121636869|ref|YP_977092.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660723|ref|YP_001282246.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224989340|ref|YP_002644027.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|260185844|ref|ZP_05763318.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260199964|ref|ZP_05767455.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260204150|ref|ZP_05771641.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289442359|ref|ZP_06432103.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289446514|ref|ZP_06436258.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289573573|ref|ZP_06453800.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289749468|ref|ZP_06508846.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289753000|ref|ZP_06512378.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289757029|ref|ZP_06516407.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|289761078|ref|ZP_06520456.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|294996428|ref|ZP_06802119.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] gi|297633465|ref|ZP_06951245.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297730450|ref|ZP_06959568.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313657778|ref|ZP_07814658.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|1524218|emb|CAB01977.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|31617721|emb|CAD93830.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121492516|emb|CAL70984.1| Possible formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504875|gb|ABQ72684.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224772453|dbj|BAH25259.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415278|gb|EFD12518.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289419472|gb|EFD16673.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289538004|gb|EFD42582.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289690055|gb|EFD57484.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289693587|gb|EFD61016.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289708584|gb|EFD72600.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|289712593|gb|EFD76605.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|323720655|gb|EGB29733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904835|gb|EGE51768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 158 Score = 73.1 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 37 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 94 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 95 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|167967805|ref|ZP_02550082.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215426213|ref|ZP_03424132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215429803|ref|ZP_03427722.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215445090|ref|ZP_03431842.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218752609|ref|ZP_03531405.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|254363871|ref|ZP_04979917.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254549924|ref|ZP_05140371.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289555276|ref|ZP_06444486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308370542|ref|ZP_07421943.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308371805|ref|ZP_07426308.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308374140|ref|ZP_07435023.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308375296|ref|ZP_07443456.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308376555|ref|ZP_07439277.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308377554|ref|ZP_07479648.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308378766|ref|ZP_07483841.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308397511|ref|ZP_07492578.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|134149385|gb|EBA41430.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|289439908|gb|EFD22401.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308331620|gb|EFP20471.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308335433|gb|EFP24284.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308342884|gb|EFP31735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308346800|gb|EFP35651.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308350716|gb|EFP39567.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308355377|gb|EFP44228.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308359316|gb|EFP48167.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308366882|gb|EFP55733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|328459772|gb|AEB05195.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 160 Score = 73.1 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 + +QK++AGIGN Y E L AK+SP L T + + + ++ Sbjct: 39 ITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLH--EAMASVLSDAVRRSVG 96 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + L+ G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 97 QGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|329295930|ref|ZP_08253266.1| endonuclease VIII [Plautia stali symbiont] Length = 156 Score = 73.1 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 14/129 (10%) Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + LL+Q +AG+GN E LW A L + L L L Sbjct: 41 PRFRRRQFSGLLLDQAFLAGLGNYLRVEILWHAGLLAQHCAQDLSDQQ------LDALSH 94 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 + V + GS + + F V+ + G+ C CG +I + V + R Sbjct: 95 AMLAVPRLSYQMRGSMKKYHEEA-------AFRFEVFHRKGKKC-RRCGTVIEKGVLSSR 146 Query: 280 STFYCTYCQ 288 ++C CQ Sbjct: 147 PFYWCPGCQ 155 >gi|257069108|ref|YP_003155363.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] gi|256559926|gb|ACU85773.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] Length = 295 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 96/305 (31%), Gaps = 39/305 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + T+T L P +A G + +V R K+L Sbjct: 1 MPEGDTVARQCRILHEALAGATLTGCDLR-------VPRAATADLVGWCVQEVRPRGKHL 53 Query: 61 LIELEG------NLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ L L++ HL M G + ++ S + LT + Sbjct: 54 LLRLLPPSPGAVPLTLHTHLMMDGIWHVDGRALRSSDTSAGPRPAATIRAVLTARHEDGR 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + L D++ + + + + AL Sbjct: 114 QTRAIAYDVKQVRLVRTADEDSLVGHLGPDLLDPLWDDAHRERAVQNLAAEPEREIGLAL 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ +AGIGNIY E + ++ P T S G L+ + + + Sbjct: 174 LDQRNLAGIGNIYRSELCFLRRVHPAAPTGSAGDLRGFVDLAHRLLVLNQDRAVR--VTT 231 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--------RSTFY 283 GG RD VYG+ G C I+R R ++ Sbjct: 232 GGMLGRD------------GDLWVYGRGGRQ-CRRCRARIQRGELGDPRLEGTEPRVLWF 278 Query: 284 CTYCQ 288 C CQ Sbjct: 279 CPRCQ 283 >gi|254444020|ref|ZP_05057496.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] gi|198258328|gb|EDY82636.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] Length = 266 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 110/291 (37%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EV ++ LH + R + G ++ K Sbjct: 1 MPELAEVF-YHSSIWKRSCGERFQLAWLHGEARCCRLLERSRLVDSLDGVTLLAGYTHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L G + HLGM+GS C + +H+H+ I + +++ D Sbjct: 60 RMLFAFSGGAFLEAHLGMTGSLHRCEVDCEE----GKHDHLAIRSSE------STLVFRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIV 177 PR+FG + L L PEP + ++ S LK LL+Q + Sbjct: 110 PRKFGKLALHFADEGDLPQWWNELPPEPHAKGFTRERFGPLLARRQGSVLKALLLHQDLF 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN E LWRA++ P R+ SL + L L QE + V +A+ G+ Sbjct: 170 PGVGNWMADEILWRARIRPDRRLGSLSKGE------LDALFQETRWVCREAVRIIGT--- 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY F++ + K G C + ++R GR+T + Q Sbjct: 221 DYTDPP-DSWLFKHRW----KDGGIC-PVSQKNLQRDTVGGRTTCWSPAVQ 265 >gi|325066953|ref|ZP_08125626.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Actinomyces oris K20] Length = 139 Score = 72.7 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 10/136 (7%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + ++ L++Q +++G GNIY E L+R +SP R + L Sbjct: 9 FVAKARSRRKSIGELLMDQAVISGAGNIYRAETLFRVGVSPFRAGNRTSEER------LR 62 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF---QNAFSVYGKTGEPCLSNCGQMIR 272 + ++++ ++ + G + D + + + VY +TG PCL CG + Sbjct: 63 AIWEDLRPLMEYGVATGFITTVDLDDVPDPLPPDDPEAGRWYVYHRTGRPCL-RCGTPVA 121 Query: 273 RIVQAGRSTFYCTYCQ 288 A R F+C CQ Sbjct: 122 EREVASRRLFWCPTCQ 137 >gi|302558039|ref|ZP_07310381.1| endonuclease VIII [Streptomyces griseoflavus Tu4000] gi|302475657|gb|EFL38750.1| endonuclease VIII [Streptomyces griseoflavus Tu4000] Length = 150 Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 20/145 (13%) Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + L + L ALL+Q+ +AG+GN++ E + ++P L + Sbjct: 13 PDWDPDLALANLLKDPARPLGEALLDQRNLAGVGNVFKSELCFLLGVTPWLPVGDLPADR 72 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 L K + E + R + G G VYG+ PCL C Sbjct: 73 SAKLPGLAKKLLEFNRE------------RPIRNTTGRRG---QDLYVYGRARRPCL-RC 116 Query: 268 GQMIRRIVQAG----RSTFYCTYCQ 288 +R Q R T++C CQ Sbjct: 117 RTPLRVAEQGDGSRERPTYWCPTCQ 141 >gi|289755420|ref|ZP_06514798.1| endonuclease VIII nei [Mycobacterium tuberculosis EAS054] gi|289696007|gb|EFD63436.1| endonuclease VIII nei [Mycobacterium tuberculosis EAS054] Length = 147 Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 16/142 (11%) Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D+ + + + ALL+Q+++AGIGN+Y E + + + P ++ Sbjct: 22 DDWDPQRAAANLIVAPDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPTAPVSAVADPR 81 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 L + D G VYG+ G+ C C Sbjct: 82 RLVTRARDMLWVNRFRWNRC------------TTGDTRAGR---RLWVYGRAGQGC-RRC 125 Query: 268 GQMIRRIVQAGRSTFYCTYCQK 289 G +I R ++C CQ+ Sbjct: 126 GTLIAYDTTDERVRYWCPACQR 147 >gi|296425340|ref|XP_002842200.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638460|emb|CAZ86391.1| unnamed protein product [Tuber melanosporum] Length = 394 Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 12/223 (5%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRR 56 MPEL V++ R L + T+ ++ + F F +A G+ ++D Sbjct: 1 MPEL--VQVARLAGRLKKHLAGKTLKNVTAMDDPVVFKDTTAKKFISAVEGRTVLDAKSL 58 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFI-----IEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 +YL +E++ ++HLG++G H + + + + Sbjct: 59 GRYLWLEMDKPPHPVMHLGIAGWVFFKSDPYSHYYAREKPEFTNWPPKGEIFHLKIHGSQ 118 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT-HQFHKKNSNLKNA 170 ++ DPRR G + L++ S K P Q K+S + Sbjct: 119 DEAMFADPRRLGRLRLMDCSSKDIPKQAPLNDLGPDPLQTEITMEWLRQKFTKHSPARLL 178 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 L +QK +AG G+ E L++A++ P + R Sbjct: 179 LADQKNIAGFGSWMSEEILYQARIHPEFQGRKFNDGQFERIRR 221 >gi|269955906|ref|YP_003325695.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304587|gb|ACZ30137.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 398 Score = 71.2 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 28/158 (17%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + + L+ Q +VAG+GNI+ EAL+RA L P+R R + Sbjct: 243 FVTRVCRSRVTVGQQLMEQSVVAGVGNIFRAEALFRAGLDPLRPGRDVDPAVLGAIWD-- 300 Query: 216 KLIQEIQKVLIDA-----------------------IDAGGSSLRDYVHIDGSIGYFQNA 252 L+ + + G ++ R G Sbjct: 301 DLVDLMHDGVRRGAIVTTRPADRGHDAPGIRAAGGAAALGATTRRHERRAPVPPGAVPRE 360 Query: 253 --FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F VY + G PC CG + AGR+ ++C CQ Sbjct: 361 ESFYVYQRDGLPC-RLCGAPVLVKDLAGRALYWCPVCQ 397 >gi|163838843|ref|YP_001623248.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952319|gb|ABY21834.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 188 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 16/141 (11%) Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + + ALL+Q+ +AGIGNIY E + P+ + Sbjct: 60 PDWNPLEARNRLSAQLGRPIGLALLDQRNLAGIGNIYRNELCFLIGAHPLSAVEKVDLGR 119 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 ++ +L++ + R G NA VYG+ +PC C Sbjct: 120 --VVELAKRLLEANKN-------------RKQRSTTGGPARADNASWVYGRARQPC-RRC 163 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 G +IR GR ++C CQ Sbjct: 164 GSLIREDELEGRVIYFCPRCQ 184 >gi|149277931|ref|ZP_01884070.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] gi|149231129|gb|EDM36509.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] Length = 259 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 102/283 (36%), Gaps = 32/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ NL KN T+ + + A G ++ V R K L Sbjct: 1 MPELPDLEVFAANLEKRFKNKTLEKLDVQVSKKLNVPEKELKDALEGHELKQVLREGKTL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G + +HL + G + ++ K + Sbjct: 61 QLHFGGGNVLGLHLMLHGELSLIEK------------------DDDVKFKIIEFQFRGDN 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF D + + P + + ++ A Y +K +K L++QK+V GI Sbjct: 103 RFALTDFQKQATPTLNPEVSEVPDALSEEFSFA-YFQDLLSRKKIKIKQLLMDQKLVRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AK+SP ++++ + +L I KVL D I A ++ D Sbjct: 162 GNTYADEILWHAKISPFSVSKAIPTKE------VKELYHSIGKVLRDEIIALTKAISDSF 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + + F V N G I R T+Y Sbjct: 216 NAEVK------DFLVIHNPSLKKSPN-GYEILIDKNGARKTYY 251 >gi|213586785|ref|ZP_03368611.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 131 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN 93 L L++ H + G + + T Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR 88 >gi|213022931|ref|ZP_03337378.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + + R K L Sbjct: 18 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQL-----KPYESQLTGQLVTRIETRGKAL 72 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN 93 L L++ H + G + + T Sbjct: 73 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTR 105 >gi|68697730|emb|CAJ14058.1| hypothetical protein [Streptomyces viridochromogenes] Length = 190 Score = 71.2 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 14/203 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ ++ + D Sbjct: 61 LLARTGGP-TLVLHFGMTGRLVCCHPGDAVEA----HDRVLFTLSGGR-----QLRFRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L R + + +LK AL +Q ++AG Sbjct: 111 RKLQGLWLAHDDFDIDRLLRRQGPDALTVDRAE---FEAVLCARRGSLKTALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRS 202 +GN+ E LWRA+L P R+TR Sbjct: 168 LGNLLADEILWRARLRPDRRTRE 190 >gi|303286994|ref|XP_003062786.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] gi|226455422|gb|EEH52725.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] Length = 477 Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 88/297 (29%), Gaps = 44/297 (14%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 V + + + N RF + A K + V K L + Sbjct: 7 VHRVAQAHRRALVGKKFKA---SSPNGRF---VDGARAIDDKALARVEAIGKNLFYFFDR 60 Query: 67 -------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + + VH GMSG F + S + Sbjct: 61 GEGGRGGGSERHGHHVMHVHFGMSGRFSVHAASDPPAATPTTRLKLEGHGR--------- 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 M + LG +P A L +F ++ AL++ Sbjct: 112 -----VAMLSAMVVDLMDESGFEAKRVALGQDPLREDACADTLWEKFTASRKSVGLALMD 166 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + AG+GNIY E L++A + P + R + + L + ++L G Sbjct: 167 QSMFAGVGNIYRAEILFKAGVHPEQPCRD------LDRGVFDSLWRHSVELLQRGYSTGS 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC-TYCQK 289 D +G VY ++ C CG + A R+ + C CQK Sbjct: 221 ILTVDPEEAL-VLGEPWTRRYVYNQS--SCG-RCGGKVLTWEMANRTVYCCGGSCQK 273 >gi|253317167|ref|ZP_04840380.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 96 Score = 70.8 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNLSIIV---HLGMSGSFII 82 I +V RR+KY++ +L+ HLGM+G F + Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFSL 96 >gi|190574463|ref|YP_001972308.1| putative DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia K279a] gi|190012385|emb|CAQ46013.1| putative DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia K279a] Length = 244 Score = 70.4 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 91/290 (31%), Gaps = 53/290 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + ++ R K V + N R D +G+++ V K+ Sbjct: 1 MPEGPSI-VLLREAASHFKGHVVRAV---SGNSRVDLSP-----LQGRRVKAVRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + ++ +HL M GS+ I+ + P V++ N Y Sbjct: 52 LLEFSRH-TLRIHLMMFGSWRIDE-------RKPTPPRVSLRFDNGELNF-----YACSV 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R L E D + + + +ALL+Q + AG+ Sbjct: 99 RLIDEPLDEVYDW--------RADVMNDAWDPKLARRKLKAMPDVMVCDALLDQTVFAGV 150 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R + P + L T + Sbjct: 151 GNIIKNEVLFRIGVHPATRLGDLPPRRLTALITQARAYSFDFLQWK-------------- 196 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 + + V+ + C CG I ++ R TF+C Q Sbjct: 197 ----RRFELKKHWQVHTR--RIC-PACGGPISKLYMGTTRRRTFFCPNDQ 239 >gi|145628227|ref|ZP_01784028.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144980002|gb|EDJ89661.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 63 Score = 70.0 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA 43 MPELPEVE + + ++ + I + + LR+ + Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQ 43 >gi|33322852|gb|AAQ07162.1|AF496471_2 formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. lactis] Length = 47 Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG 47 MPE+PEVE +RR L ++ T+ + + + P F +G Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYXKVITGDPETFKRELKG 47 >gi|194702244|gb|ACF85206.1| unknown [Zea mays] Length = 229 Score = 68.5 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 17/119 (14%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++GIGN E L+++++ P++ + P++ L Q I++V+ A+ Sbjct: 21 LLDQSFISGIGNWIADEVLYQSRIHPLQIASN------LPRESCEALHQSIEEVVKYAV- 73 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D + F + + + G+ G+ I I GR+T Y QK Sbjct: 74 ----------EVDADMDRFPKEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQK 122 >gi|10802797|gb|AAG23620.1|AF244671_1 endonuclease VIII [Carboxydothermus hydrogenoformans] Length = 99 Score = 68.1 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 8/105 (7%) Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 ++ + P + I L L + ++ + AG V + Sbjct: 2 FLAGLGNYLRWRPSAVGLTGIIAKDLNAAQLDALAHALLEIPRFSYYAGQ------VDEN 55 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 56 KHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 98 >gi|329296052|ref|ZP_08253388.1| endonuclease VIII [Plautia stali symbiont] Length = 108 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L M +T++ L + A G+ I R K L Sbjct: 1 MPEGPEIRRAADQLAAAMVGKPLTEVWFAFPAL-----KTYEPALMGETIDAFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 L L++ H + G + + + Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVPSGTEPNT 86 >gi|126331299|ref|XP_001371089.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 635 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 35/252 (13%) Query: 40 HFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 +F G V K L + ++ +H GM+G +I K P V Sbjct: 70 NFPGLLNGCVYSGVETLGKELFMYFGL-KALRIHFGMNGFVLINPLKSKNQTKTPPVFEV 128 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 ++ Y+ F Q + + + Sbjct: 129 QLTKD-------LICFYDSSVEFR-----NAMESKQKIRMMEDLDVCSPKFNFSRAENEV 176 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 +K+ L + L++Q ++ GIGNI EAL+ + L P K L + L++ Sbjct: 177 KKQKDRMLCDVLMDQNVLPGIGNIIKNEALFDSGLHPAVKVSQLKDEQT------HHLVK 230 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-- 277 I+ I + + Y H + VY ++ C C I Sbjct: 231 MIRDFTIFFYECRKTGAALYRH-----------YKVYKRSD--CG-QCSSKITVCRLGEN 276 Query: 278 GRSTFYCTYCQK 289 R T++C CQK Sbjct: 277 NRMTYFCPRCQK 288 >gi|152967340|ref|YP_001363124.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151361857|gb|ABS04860.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 247 Score = 67.7 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 92/289 (31%), Gaps = 45/289 (15%) Query: 4 LPEVEIIRRNLMM---VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE + R+ + ++ + RFD + G +++DV K+L Sbjct: 1 MPEAHSLHRHARDQRAALAGQVLS---VSSPQGRFD-----ATPFDGHRLVDVQAHGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + VHLGM G F+ + + P + L T P Sbjct: 53 LYSFEQAPDVHVHLGMKGIFL-----RTEDLSLPPRAGTRMRLAGETTAFSLI----APS 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R +D + + + + + A+L+Q + AGI Sbjct: 104 RCEALDAAARAELLASLG----PDPLREGAAAREEAARRLGTARGAVGAAVLDQSVWAGI 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN + E L+ A + P R+ + + L + G + D Sbjct: 160 GNAWRAELLFLAGIDPGRRV-DEAEAGRVWDLAVELLPLGVDA---------GQVVSDPT 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D VY + E C CG + GR+ + C Q+ Sbjct: 210 APDER--------WVYKR--ETC-RRCGSPVGTRTVGGRTAYTCPVDQR 247 >gi|120610528|ref|YP_970206.1| formamidopyrimidine-DNA glycolase [Acidovorax citrulli AAC00-1] gi|120588992|gb|ABM32432.1| Formamidopyrimidine-DNA glycolase [Acidovorax citrulli AAC00-1] Length = 254 Score = 67.3 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +++ + + + + + +AA G++++ V K+ Sbjct: 1 MPEGPSLVLLKEAARPLAEGRRIERASGNTTAI-------DTAALPGRRVVSVRTWGKHF 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ VH + GSF I+ A + + + Sbjct: 54 LLELDSGCTVRVHFLLFGSFRIDDPKDAP--------------------ARLSLGFEGGH 93 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 F ++ + + A+ +ALL+Q + AG Sbjct: 94 AIDFYACSVRPVEGPLDGAYDWRADVMSDAWDAALARRRLRAHPEVLACDALLDQDVFAG 153 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R ++ P+ +L + Sbjct: 154 VGNIIKNEVLFRIRVHPLSPVGALPATRLRELVAQAREYAFEFLEWK------------- 200 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 G + + + + C + R +YC CQ Sbjct: 201 -----RQGVLRRHWLAHR---QSECPRCHIPFEKRKLGRTARIAYYCERCQ 243 >gi|73979610|ref|XP_532852.2| PREDICTED: similar to Endonuclease VIII-like 3 (Nei-like 3) (DNA glycosylase FPG2) [Canis familiaris] Length = 771 Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 31/254 (12%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D +FS G V K LL+ G ++ +H GM GS +I KN Sbjct: 228 DSSQNFSRLLNGCVYCGVQTLGKELLMY-FGPKALRIHFGMKGSIMINPLENK--NKNGV 284 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + I LT + ++ F ++ Q + + + Sbjct: 285 SPVLEIQLTKD-----LICFFDSSVEFR-----NSAESQQRVRMMEELDVCSPKFSFSRA 334 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + +K L + L++Q+++ G+GNI EAL+ + L P K L + Sbjct: 335 ESEVKKQKGRMLCDVLMDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHYLVKMI 394 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + + GS + + VY + C C + R+ Sbjct: 395 RDFSILFYRCR----KTGSVIS-------------KHYKVYKRPNC-CQCCCKITVCRLG 436 Query: 276 QAGRSTFYCTYCQK 289 + R T++C CQK Sbjct: 437 ENNRMTYFCPRCQK 450 >gi|300867972|ref|ZP_07112611.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300333993|emb|CBN57789.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 77 Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + + + D+ L F F A +GK I RR K Sbjct: 1 MPELPEVETICRGLNQLTLGLEILGGDVLLENTIASPFFARDFLAGLQGKAIARWHRRGK 60 Query: 59 YLLIE 63 YLL E Sbjct: 61 YLLAE 65 >gi|319788269|ref|YP_004147744.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317466781|gb|ADV28513.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 65.8 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 87/292 (29%), Gaps = 53/292 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R V + + + G++++ + K+ Sbjct: 17 MPEGPTI-VILREAAAGFVGRKVRAVHGNSR--------EPIQRIAGRRLVAMHSWGKHF 67 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + +H + GS+ I + P + + + Y Sbjct: 68 LLAFDDFS-VRIHFMLFGSYRINE-------RKPTPARLGLEFSRGGELNF----YACSV 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF L E D A + + +ALL+Q + AG+ Sbjct: 116 RFIDQPLDEVYDWSA--------DVMNDAWDPAAARRKLRARPQALAADALLDQDVFAGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P + +L + A Sbjct: 168 GNIIKNEVLHRIRVHPESRIGALPPRKLGQLVAEARQYSFDFLEWKKAYVL--------- 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-RIVQAG--RSTFYCTYCQK 289 + + V+ K + C G + R R F+C+ CQ+ Sbjct: 219 ---------RKHWQVHAK--KTC-PRDGTELSYRKELGQARRRAFWCSVCQR 258 >gi|168061884|ref|XP_001782915.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665587|gb|EDQ52266.1| predicted protein [Physcomitrella patens subsp. patens] Length = 603 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 92/274 (33%), Gaps = 23/274 (8%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 + +T I +H KN+ + F V L + + + +HL Sbjct: 73 AEAIDGHFLTHIEVHGKNIFYFFTPE-----------RVEEEG-VLEKVGDDAVVVHIHL 120 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 GMSGSF + P + + L N + + + + + Sbjct: 121 GMSGSFRLYPFPGPIPREA-----TRLRLYNEELGFEAHLSASVCDHGNIELYRKKITEL 175 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 PLR + + ++ K ++ L++Q +VAGIGNIY E L+ L Sbjct: 176 GPDPLRKDADKELLWASIQHLISEIGQKTKRSIGAVLMDQTLVAGIGNIYRAEILFVVGL 235 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P + ++ + K ++++ + I Q Sbjct: 236 HPEQPANTVCRPTFEFLWEQSK--RQMEIGVEVGNIITILPEDSDKPFPKKIKASQLR-Y 292 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + + C CG I+ A RS + C CQ Sbjct: 293 VYNQ--KACGK-CGGPIKVWTIAQRSVYACEACQ 323 >gi|326316600|ref|YP_004234272.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373436|gb|ADX45705.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 249 Score = 65.8 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +++ + + + + + AA G++++ V K+ Sbjct: 1 MPEGPSLVLLKEAARPLAEGRRIERASGNTTAI-------DMAALTGRRVVSVRTWGKHF 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ VH + GSF I+ + + + Sbjct: 54 LLELDSGCTVRVHFLLFGSFRIDDPK--------------------DTPARLSLGFEGGH 93 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA-LLNQKIVAG 179 F ++ + ++++ + + L LL+Q + AG Sbjct: 94 AIDFYACSVRPVEGPLDDAYDWRADVMSDAWDPALARRRLRARPELLACDALLDQDVFAG 153 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R ++ P +L + Sbjct: 154 VGNIIKNEVLFRIRVHPCSPVGALPAARLRELVAQARDYAFEFLEWK------------- 200 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 G + + + + C + R +YC CQ Sbjct: 201 -----RQGVLRRHWLAHR---QSECPRCHIPFEKRKLGRTARIAYYCERCQ 243 >gi|85710814|ref|ZP_01041875.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] gi|85695218|gb|EAQ33155.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] Length = 60 Score = 65.4 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ + + +H LR+ P + + V R Y Sbjct: 1 MPELPEVEVSRMGIAPHIEGHKIERVNVHDTRLRWPVPDQVHHVEGSRLLRVVDERNIYC 60 >gi|21232956|ref|NP_638873.1| endonuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766971|ref|YP_241733.1| endonuclease [Xanthomonas campestris pv. campestris str. 8004] gi|21114796|gb|AAM42797.1| endonuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572303|gb|AAY47713.1| endonuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 250 Score = 65.4 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 85/292 (29%), Gaps = 52/292 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R + + + K A + +K++ + K+L Sbjct: 1 MPEGPSL-VILREEAAAFVGRKILRVQGNSKQ--------DIARLQQQKVLALRSWGKHL 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I K + + + Y Sbjct: 52 LIECAQFS-VRIHFLLFGSYRINED------KPNAVPRLRLEFSKGETLNFYACSVQFIE 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++ A +ALL+Q I +G+ Sbjct: 105 RPLDEVYDWSADV------------MNPLWDAAQARLKLRAAPQLLAADALLDQSIFSGV 152 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P + +L + A Sbjct: 153 GNIIKNEVLHRIRVHPESQVGALPARKLGELVTQARDYSFDFYTWKKAFVL--------- 203 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 204 ---------KKRYQVHTKT--IC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|319778283|ref|YP_004129196.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] gi|317108307|gb|ADU91053.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] Length = 317 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 114/322 (35%), Gaps = 69/322 (21%) Query: 1 MPELPEVEIIRRNLMMVM-------KNMTVTDI----------CLHRKNLRFDFPHHF-- 41 MPELPEVE+ +++L ++ ++ T+ + + +N + DF Sbjct: 1 MPELPEVEVTKQDLYSMILESEVGTESKTIAKVLPYTKEFFTAKTNPRNNKKDFLAQILK 60 Query: 42 ----SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 KI + R AKY++I + +L ++HLGMS + + Sbjct: 61 YDDRRKELENSKITSIYRIAKYIIISTDASLHFVIHLGMSATVYSIIATPNDRKLIESGG 120 Query: 98 HVTISLTNNTNTKKYRVI---------------YNDPRRFGFMDLVETSLKYQYPPLRTL 142 + N++T + ++D RRFG ++ ++ Sbjct: 121 GLEFLDFLNSSTDRVFARHHHTGFLLKDGRIFLFHDVRRFGEWAVLTDDELNKFKDGFGS 180 Query: 143 GPEPA-----------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P + + T ++++ N L + + + G G IY E ++ Sbjct: 181 SWDPHLSNFDSKSLIEFINNHPQKTTRKWNQSNMGLLSFIGKSGAIKGCGAIYSREVVFA 240 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-------------- 237 + L P SL + + L +Q VL ++I GG++ Sbjct: 241 SGLDPSTPISSLKEYDWI------NLANSMQTVLSESISDGGTAFNSKDTDDADSVRSRG 294 Query: 238 DYVHIDGSIGYFQNAFSVYGKT 259 D+V G + +Q Y K Sbjct: 295 DFVRPSGQLSRYQEKLKSYKKK 316 >gi|224048925|ref|XP_002186869.1| PREDICTED: nei like 2 (E. coli) [Taeniopygia guttata] Length = 290 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 88/307 (28%), Gaps = 51/307 (16%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P +R+ L V + + L + + + ++ + Sbjct: 1 MPEGP---SVRKFQLLTSPFVGQVVAKVGGSSRKLSVNDLNAL--RLQDSQVHGKNLYLA 55 Query: 59 YLLIELEGNLSIIVHLGMS---------GSFIIEHTSCAKPIKNPQHNHVTI---SLTNN 106 ++ E S G+++ H ++ + + + Sbjct: 56 FVAAEGPDEELQEAQHSKSEAPEAAEGQGNWLRIHFGMFGSVRANEFSRASRANKRGDWK 115 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + + F + R + + Sbjct: 116 DPVPRLVLHFESGGFLVFYNCR----MLWCSSPRADPASDILSVEFHRGRALRALCAPEP 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + LLNQ+ +G+GNI E L+ A++ P+ L +++ L +L+ Sbjct: 172 VCYTLLNQRYFSGLGNIIKNEILYLARIHPLTPGSLLARSD------LERLLD------- 218 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRST 281 A+ L + + G VY K P G + + R T Sbjct: 219 CAVQFSSEWLHNKLRGHGL------HPQVYQKEQCP----QGHPLMKGTFGPLGGFKRLT 268 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 269 WWCPQCQ 275 >gi|118090127|ref|XP_426306.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 611 Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 84/249 (33%), Gaps = 35/249 (14%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G+ V K L + ++ +H GM+GS I + ++ + I Sbjct: 106 DFLTGQVFRGVETLGKELFMY-FDQKALRIHFGMNGSMRINPDG--RQDRSGALPVLEIR 162 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 LT +T + + Q + + + + Sbjct: 163 LTEDTICFFEV----------TAEYRNVTECEQRVRMMESLDVCSPKFSFLRAESEVKQQ 212 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K L + LL+Q+++ G+GNI EAL+ + L P K L + L++ + Sbjct: 213 KTRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAAKVCQLTDE------HIRHLVKMTR 266 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRS 280 + + Y H + VY + + C S C + I R Sbjct: 267 DFTLLFYKCRKTGSPLYKH-----------YKVYRR--QTC-SQCNEKITVCRLGENNRM 312 Query: 281 TFYCTYCQK 289 T++C+ CQK Sbjct: 313 TYFCSRCQK 321 >gi|241956478|ref|XP_002420959.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis CD36] gi|223644302|emb|CAX41115.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis CD36] Length = 348 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 91/323 (28%), Gaps = 82/323 (25%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII---VHLGMSGSFI----------- 81 + V R KY I L + + +H GM+G Sbjct: 18 KELDKMRKNLTNAVVTSVGRHGKYFWIRLHNHNTCNVLLMHFGMTGMVKLRNVQSHLSFM 77 Query: 82 ---------------------IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE + K P+ + L N N KK ++DPR Sbjct: 78 ENGGDKKVLEMLERFKYKDSKIEPDAEVKQEWPPRFTKFDMELEN--NEKKLEFAFSDPR 135 Query: 121 RFGF-----------------------------MDLVETSLKYQYPPLRTLGPEPADNSF 151 R V ++ Sbjct: 136 RLARVRSLSGLEVSADESLLKLSPLNVLGPDYSKPDVPPKELEKFVFGDPDSDNHGRPRL 195 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + K +K+ LL+Q AG+GN E L++A + P S I N+ Sbjct: 196 PIDEFSSLVLSKKKPIKSLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPNDLDYI 255 Query: 212 D-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 +L KL + V +A+ ++G + F + + + + G+ Sbjct: 256 HPVLQKLYDSLIYVCEEAV-----------RVEGDVTKFPDDWLMLHRWGKGRKEKRKTP 304 Query: 271 ----IRRIVQAGRSTFYCTYCQK 289 + I GR++ YC QK Sbjct: 305 NGLILDHITVGGRTSCYCPALQK 327 >gi|239917495|ref|YP_002957053.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838702|gb|ACS30499.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 241 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 11/148 (7%) Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 N + + + L++Q V+GIGNI+ EAL+RA + P R R + Sbjct: 100 PDPLNDDDPAPFYDLARRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVS 159 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGE 261 + L L + ++ + + G H G + ++A VY + G Sbjct: 160 APD------LESLWADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGL 213 Query: 262 PCLSNCG-QMIRRIVQAGRSTFYCTYCQ 288 CL CG + I A R + C CQ Sbjct: 214 ACL-VCGREAIVVEEMAARKLYRCLTCQ 240 >gi|2240043|gb|AAB62328.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus] Length = 34 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR 34 MPELPEVE +RR L ++ T+ + + + Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMI 34 >gi|188990064|ref|YP_001902074.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris str. B100] gi|167731824|emb|CAP50008.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris] Length = 275 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 86/292 (29%), Gaps = 52/292 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R + + + K A + +K++ + K+L Sbjct: 26 MPEGPSL-VILREEAAAFVGRKILRVQGNSKQ--------DIARLQQQKVLALRSWGKHL 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I K +++ + Y Sbjct: 77 LIECAQFS-VRIHFLLFGSYRINED------KPNAVPRLSLEFSKGETLNFYACSVQFIE 129 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R ++ A +ALL+Q I +G+ Sbjct: 130 RPLDEVYDWSADV------------MNPLWDAAQARRKLRAAPQLLAADALLDQSIFSGV 177 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P + +L + A Sbjct: 178 GNIIKNEVLHRIRVHPESQVGALPARKLGELVTQARDYSFDFYTWKKAFVL--------- 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 229 ---------KKRYQVHTKT--IC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|297519506|ref|ZP_06937892.1| endonuclease VIII, 5-formyluracil [Escherichia coli OP50] Length = 72 Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLG 75 L +L++ H Sbjct: 56 LTHFSNDLTLYSHNQ 70 >gi|325919288|ref|ZP_08181328.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] gi|325550220|gb|EGD21034.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] Length = 250 Score = 63.5 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 83/292 (28%), Gaps = 52/292 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILREQ-TEAFVGRKILRVSGKSKQ--------DIARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I+ K + + + Y Sbjct: 52 LIECAQFS-VRIHFLLFGSYRIDED------KPNAVPRLRLEFSKGQRLNFYACSVQFID 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R T+ A + +ALL+Q I AG+ Sbjct: 105 RPLDEVYDWTADV------------MHPLWDGAQARRKLRAAPSMLAADALLDQSIFAGV 152 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P +L + A Sbjct: 153 GNIIKNEVLHRIRVHPESAVGALPARKLGELVTQARDYSFDFYTWKKAFVL--------- 203 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 204 ---------KKNYQVHTKT--SC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|254503621|ref|ZP_05115772.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] gi|222439692|gb|EEE46371.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] Length = 168 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 +GP+ + + + + K S++ L+NQ ++AGIGNIY E LW Sbjct: 20 DPDDLTKLTSRIGPDILRSDADPEKVFARISKSRSSIGKLLMNQAVLAGIGNIYRSEILW 79 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 R + P R + L +++ +L + +L + D G G ++ Sbjct: 80 RQGIHPDRPGKDLSRDDF------ERLWADAVHLLEIGVKRNAIITVD-EAAPGR-GRYR 131 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++GK C C I ++ R ++C+ CQ Sbjct: 132 ERVNIFGK--RSC-PTCAGGITQVEIDTRKAYFCSTCQ 166 >gi|289667477|ref|ZP_06488552.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 250 Score = 63.1 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TEAFVGRKILRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + ++ + Sbjct: 52 LIECANFS-VRIHFLLFGSYRINEDKPN-------------------AVPRLCLEFSKGQ 91 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 R F ++ + + + ++A + +ALL+Q I AG Sbjct: 92 RLNFYACSVQFIECPLDEVYDWTADVMNPLWDAAQARRKLRAMPGMLAADALLDQTIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L + A Sbjct: 152 VGNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL-------- 203 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 204 ----------KKHYQVHTKT--SC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|255024134|ref|ZP_05296120.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-208] Length = 51 Score = 62.7 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKI 50 MPE+PEVE +R L ++ + + + + P F G++I Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEI 51 >gi|325928899|ref|ZP_08190061.1| formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] gi|325540695|gb|EGD12275.1| formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] Length = 250 Score = 62.3 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 84/292 (28%), Gaps = 52/292 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I K + + +N Y Sbjct: 52 LIEFAHFS-VRIHFLLFGSYRINED------KPNAVPRLCLEFSNGQRLNFYACSVQFIE 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R T+ A +ALL+Q I AG+ Sbjct: 105 RPLDEVYDWTADV------------MNPLWDPAQARRKLRAAPALLAADALLDQTIFAGV 152 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P +L + A Sbjct: 153 GNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL--------- 203 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 204 ---------KKHYQVHTKT--SC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|292492013|ref|YP_003527452.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] gi|291580608|gb|ADE15065.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] Length = 110 Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELP+VE +R L + T+ + + L D H +++ + R KY Sbjct: 1 MPELPDVETFKRYLDATALHQTIDSVSVKATVLLKDLSIRHLQHCLEKRQLKETQRHGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 L + L+ +++H GM+G P Sbjct: 61 LFVSLDDGDWLVLHFGMTGYLQYFKHRKDSPP 92 >gi|21241377|ref|NP_640959.1| endonuclease [Xanthomonas axonopodis pv. citri str. 306] gi|21106708|gb|AAM35495.1| endonuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 250 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 88/293 (30%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + ++ + Sbjct: 52 LIEFAHFS-VRIHFLLFGSYRINEDKPN-------------------AVPRLCLEFSKGQ 91 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL-NQKIVAG 179 R F ++ + + + ++A + + L L +Q I AG Sbjct: 92 RLNFYACSVQFIERPLDEIYDWTADVMNPLWDAAQARRKLRAAPALLAADALLDQTIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L + A Sbjct: 152 VGNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL-------- 203 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT G ++ AGR F+C CQ+ Sbjct: 204 ----------KKHYQVHTKTR---CPRDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|301778739|ref|XP_002924787.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 3-like [Ailuropoda melanoleuca] Length = 603 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 85/254 (33%), Gaps = 31/254 (12%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D +F G V K L + G ++ +H GM GS I C KN Sbjct: 61 DSSQNFLRLFSGYVYSGVQTLGKELFLY-FGPKALRIHFGMKGSIQINPFECK--NKNGV 117 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + LT + R+ + D ++ Q + + + Sbjct: 118 SPVFEVQLTED------RICFFDSSVELR----NSTESQQRVRMMEELDVCSPKFSFSRA 167 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + +K L + L++Q ++ G+GNI EAL+ + L P K L + Sbjct: 168 ESEVKKQKGRMLCDVLMDQIVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHYLVKMI 227 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + +L GS + + VY + C C + R+ Sbjct: 228 R----DFSILFYRCHKTGSVIS-------------KHYKVYKRPNC-CQCCCKITVCRLG 269 Query: 276 QAGRSTFYCTYCQK 289 + R T++C CQK Sbjct: 270 ENNRMTYFCPRCQK 283 >gi|325914892|ref|ZP_08177226.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325916329|ref|ZP_08178607.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537500|gb|EGD09218.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325538895|gb|EGD10557.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 275 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TAAFVGRKILHVGGNSKQ--------AIARLHQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + ++ Sbjct: 77 LIECAQFS-VRIHFLLFGSYRINEDKPN-------------------AVPRLSLEFSKGE 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 R F ++ + + + ++A + +ALL+Q I AG Sbjct: 117 RLNFYACSVQFIERPLDEVYDWTADVMNPLWDAAQARRKLRAAPGMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P + +L + A Sbjct: 177 VGNIIKNEVLHRIRVHPESEVGALPARKLGELVTQAREYSFDFYTWKKAFVL-------- 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 229 ----------KKHYQVHTKT--SC-PRDGTPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|255033949|ref|YP_003084570.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Dyadobacter fermentans DSM 18053] gi|254946705|gb|ACT91405.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Dyadobacter fermentans DSM 18053] Length = 248 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 91/292 (31%), Gaps = 53/292 (18%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE P + I+R + +K T + R +K+ D K+ Sbjct: 1 MPEGPSIVILREAIEALHLKGET-----VRLAEGRAKIDMD---RLINQKVTDFRSWGKH 52 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI ++ +H + GS+ I+ K P H ++++ Sbjct: 53 FLI-CFKGFTVRIHFLLFGSYYIDDRK-----KAPPH---------------LSLLFDKH 91 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + ++ + A+ + +ALL+Q I AG Sbjct: 92 ELNFYTTSIQLIEQPAEEIYDWSADIMAEKWNSRAAFKKLKENPEMLACDALLDQDIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNI E L+R ++ P L + L + + S D+ Sbjct: 152 SGNIIKNEVLFRTRIHP-----------------LSTIADIPDAKLKEMVKETRSYAFDF 194 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + G + + + T + C C + R ++YC CQ+ Sbjct: 195 LEWKKE-GTLKKHWLAH--TKKIC-PRCNIPFHKEYLGRTKRRSYYCESCQR 242 >gi|289664048|ref|ZP_06485629.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 275 Score = 60.8 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TEAFVGRKILRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + ++ + Sbjct: 77 LIECANFS-VRIHFLLFGSYRINEDKPN-------------------AVPRLCLEFSKGQ 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 R F ++ + + + ++A + +ALL+Q I AG Sbjct: 117 RLNFYACSVQFIERPLDEVYDWTADVMNPLWDAAQARRKLRAMPGMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L + A Sbjct: 177 VGNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL-------- 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 229 ----------KKHYQVHTKT--SC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|266623106|ref|ZP_06116041.1| DNA-formamidopyrimidine glycosylase [Clostridium hathewayi DSM 13479] gi|288865143|gb|EFC97441.1| DNA-formamidopyrimidine glycosylase [Clostridium hathewayi DSM 13479] Length = 225 Score = 60.8 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 14/208 (6%) Query: 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT 141 + K P+ + + T+ + +Y + +Y + + Sbjct: 26 VNPRFIRKEEVRPKKYQLLLEFTDGSAIGFTVAMYGSISCHSG----DYDNEYYRKSIES 81 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 + P + K + K L ++ + G+GN + + L++A + P RK Sbjct: 82 ISPLTEEFDERYFKELLASVKSAMSAKAFLAAEQRIPGLGNGCLQDILFQAGIHPQRKVL 141 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 +L L ++++ VL + GG + G+ G +Q S T Sbjct: 142 TLSDCEQNV------LWKQVRMVLQAMTEQGGRDTE--KDLFGNPGGYQTLMS--KNTVA 191 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG I + G + +YC CQK Sbjct: 192 SGCPACGGGIIKETYLGGAVYYCPSCQK 219 >gi|307103677|gb|EFN51935.1| hypothetical protein CHLNCDRAFT_9497 [Chlorella variabilis] Length = 150 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 18/160 (11%) Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 PP+ LG +P + + Q + +K LL+Q AGIGN E L+ Sbjct: 6 DRPEGVPPISELGWDPLLDMPSLPSFAAQLGGQRRAIKAVLLDQSFSAGIGNWVADEVLY 65 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 +A++ P + S+ Q + L + I V A ++ F Sbjct: 66 QARIHPEQPAHSVPQEQ------VAALHRAISHVCQVAC-----------EVEADSSRFP 108 Query: 251 NAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + G G+ I + GR++ + QK Sbjct: 109 PDWLFHHRWGNSTPAKVGGRSIDHLTVGGRTSAFVPSLQK 148 >gi|318081945|ref|ZP_07989254.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 70 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T + + L+ P +A G ++ DV R K+ Sbjct: 1 MPELPEVEALRDFLDDHLVGRIPTRVLPVAVNVLKTYDPP--PSALVGHEVTDVRRYGKF 58 Query: 60 LLI 62 L + Sbjct: 59 LDV 61 >gi|224049764|ref|XP_002188348.1| PREDICTED: similar to Endonuclease VIII-like 3 [Taeniopygia guttata] Length = 652 Score = 60.4 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 75/249 (30%), Gaps = 35/249 (14%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G V K L + ++ +H GM+GS I +K Q Sbjct: 121 DFLVGHVYRGVETLGKELFMY-FDQKALRIHFGMNGSMHINPDG-SKDRNGAQPILEIQL 178 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + + V Y + Q + + + + Sbjct: 179 MEDTVCFWDVTVEYRNAAEC-----------EQKVRMMESLDVCSPKFSFSRAENEIKQQ 227 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 L + LL+Q ++ G+GNI EAL+ + L P K L + L++ + Sbjct: 228 STRMLCDVLLDQTVLPGVGNIIKNEALFDSGLHPALKVCQLRDE------HIRHLVKMTR 281 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRS 280 + + Y H + VY + P C I R Sbjct: 282 DFTLLFYKCRKTGSPLYRH-----------YKVYKR---PACRECSGSITVCRLGDHNRM 327 Query: 281 TFYCTYCQK 289 T++C+ CQK Sbjct: 328 TYFCSRCQK 336 >gi|326918598|ref|XP_003205575.1| PREDICTED: endonuclease 8-like 3-like, partial [Meleagris gallopavo] Length = 546 Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 79/250 (31%), Gaps = 37/250 (14%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G+ V K + ++ +H GM+GS I Sbjct: 12 DFLSGQVFRGVETLGKEFFMY-FDQKALRIHFGMNGSMRINPDRSKDRNGA--------- 61 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + ++I + F + + + F+ + + + Sbjct: 62 ----LPVLEIQLIEDTICFFEVTAEYRNVAECEQKVRMMESLDVCSPKFSFLRAESEVKQ 117 Query: 163 KNSNLKNA-LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + + LL+Q ++ G+GNI EAL+ + L P K L + L++ Sbjct: 118 QKTQMLCDVLLDQTVLPGVGNIIKNEALFDSGLHPAAKVCQLTDE------HIRHLVKMT 171 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GR 279 + + + Y H + VY + + C C + I R Sbjct: 172 RDFTLLFYKCRKTGSPLYKH-----------YKVYRR--QTCG-QCNEKITVCRLGENNR 217 Query: 280 STFYCTYCQK 289 T++C+ CQK Sbjct: 218 MTYFCSRCQK 227 >gi|62857543|ref|NP_001017201.1| nei endonuclease VIII-like 3 [Xenopus (Silurana) tropicalis] gi|89269931|emb|CAJ83732.1| novel protein containing Zn-finger in Ran binding protein and others domain and 2 GRF zinc finger domains [Xenopus (Silurana) tropicalis] Length = 574 Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 90/282 (31%), Gaps = 42/282 (14%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 V K +V + L + P + ++ G V K L + +I Sbjct: 16 ARVEKGQSV--VELRGSAVSGTPPSSCYNALSSLTGCSYTGVQTLGKELFMYFGL-KAIR 72 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VH GM+GS + + + + + +I ++ E Sbjct: 73 VHFGMNGSIRLNQAVKKGQENSRPMPVAVLEVQLEKD-----LICFYESTVDVRNVSECQ 127 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 K ++ + + +K L + LL+Q I+ G+GNI EAL+ Sbjct: 128 EKIRF---LEELDVCSSKFSFSRAECEIKKQKARMLCDILLDQMILPGVGNIIKNEALFD 184 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 + L P + L + + + + + GS Y Sbjct: 185 SGLHPGVQAGLLTDMQVSHLVKMTRDFTLLFYKCRKS---------------GSALY--K 227 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQ 288 + VY + NCGQ ++I R T++C CQ Sbjct: 228 HYKVYKR------PNCGQCDKKITVCRLGENNRMTYFCPKCQ 263 >gi|257482981|ref|ZP_05637022.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 36 Score = 60.0 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 1 MFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 36 >gi|78046218|ref|YP_362393.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034648|emb|CAJ22293.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 275 Score = 59.6 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 83/292 (28%), Gaps = 52/292 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + +N Y Sbjct: 77 LIEFAHFS-VRIHFLLFGSYRINEDKPNAVPRLG------LEFSNGQRLNFYACSVQFIE 129 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R T+ A +ALL+Q I AG+ Sbjct: 130 RPLDEVYDWTADV------------MNPLWDPAQARRKLRAAPALLAADALLDQTIFAGV 177 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L R ++ P +L + A Sbjct: 178 GNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL--------- 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT C G ++ AGR F+C CQ+ Sbjct: 229 ---------KKHYQVHTKT--SC-PRDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|327479401|gb|AEA82711.1| endonuclease [Pseudomonas stutzeri DSM 4166] Length = 260 Score = 59.2 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 89/292 (30%), Gaps = 54/292 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + A G+ + + K+L Sbjct: 1 MPEGPSIVILREEVA-AFTGQRIERAE--------GSAKVDKARLTGQVVREFRSWGKHL 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE + +HL + GS+ I + +++ + + + Sbjct: 52 LIELEDVS-VRIHLLLFGSYRINERKDST-------PRLSVGFADG------ELNFYACS 97 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++ + + + L +ALL+Q + AG Sbjct: 98 VQLIEGPLDAAYDWSMDVMS-------ATWSPRGTLKRLREHPRLLACDALLDQTLFAGS 150 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R ++ P+ L + A Sbjct: 151 GNIIKNEVLYRIRVHPLSLIGELPPAKLRELVREARTYSFQFLEWKRA------------ 198 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---TFYCTYCQK 289 G + + +GK C+ C + + + GRS F+C CQK Sbjct: 199 ------GVLKANWLAHGKN--TCV-RCRIPLMKAKELGRSRRRAFFCERCQK 241 >gi|169838397|ref|ZP_02871585.1| hypothetical protein cdivTM_15076 [candidate division TM7 single-cell isolate TM7a] Length = 47 Score = 59.2 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD 36 MPELPEVE IRR L ++ + ++ F Sbjct: 1 MPELPEVETIRRGLQDIITGKKIVQSKVYDSPKSFP 36 >gi|322698696|gb|EFY90464.1| formamidopyrimidine-DNA glycosylase [Metarhizium acridum CQMa 102] Length = 305 Score = 59.2 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 88/239 (36%), Gaps = 25/239 (10%) Query: 64 LEGNLSIIVHLGMSGSFII---------EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ +++H GM+G I + + V Sbjct: 1 MDKPPHLVMHFGMTGWVHIRGEQTAYTNYYKKTKDSELKNWPPKFWKFQIKTEGKPEVEV 60 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D RRFG + LV+ P + F YL + ++ +K Sbjct: 61 AFTDARRFGRVRLVDCPGADIRKYTPLKENGPDPVIDTDRFTEEYLRGKMQARHVPVKAL 120 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++GIGN E L++AKL P + + S + KL + I+ V A+D Sbjct: 121 LLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE------IKKLYECIRYVCQTAVD 174 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G S + H F + + GK L N G+ + I GR++ Y QK Sbjct: 175 KLGDSDQFPEHW-----LFNHRWGKGGKGSSSKLPN-GEKLAFITVGGRTSCYAPEVQK 227 >gi|146281244|ref|YP_001171397.1| endonuclease [Pseudomonas stutzeri A1501] gi|145569449|gb|ABP78555.1| endonuclease [Pseudomonas stutzeri A1501] Length = 297 Score = 59.2 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 92/293 (31%), Gaps = 56/293 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + A G+ + + K+L Sbjct: 38 MPEGPSIVILREEVA-AFTGQRIERAE--------GSAKVDMARLTGQVVREFRSWGKHL 88 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE + +HL + GS+ I T + + + + Sbjct: 89 LIELEDVS-VRIHLLLFGSYRINERK--------------------DATARLSLGFANGE 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA-LLNQKIVAG 179 F ++ + ++++ + ++ L LL+Q + AG Sbjct: 128 -LNFYACSVQLIEGPLDATYDWSMDLMSDAWSPRGTLKRLRERPRLLACDALLDQTLFAG 186 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNI E L+R ++ P+ L + A Sbjct: 187 SGNIIKNEVLYRIRVHPLSLIGELPPAKLRELVREARTYSFQFLEWKRA----------- 235 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---TFYCTYCQK 289 G + + +GKT C+ C + + + GRS F+C CQK Sbjct: 236 -------GVLKANWLAHGKT--TCV-RCRIPLMKAKELGRSRRRAFFCERCQK 278 >gi|256425260|ref|YP_003125913.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Chitinophaga pinensis DSM 2588] gi|256040168|gb|ACU63712.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Chitinophaga pinensis DSM 2588] Length = 246 Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 93/292 (31%), Gaps = 57/292 (19%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P + I+R V+ + V D+ + R KKII K Sbjct: 1 MPEGPSIVILR---EEVLSFRGKEVIDVA--------GYAKIDLERLRNKKIIAFKSWGK 49 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + LI ++ +HL M G++ I + P + + Sbjct: 50 HFLI-CFKGFTVRIHLLMFGTYRINEKKNSNPT--------------------LHLQFAK 88 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + V + G + + + +ALLNQ I A Sbjct: 89 GELNFYTCAVRIIDESLDEVYDWSGDVMNEAWDPKKAMAKLKEVPEMLVADALLNQDIFA 148 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNI E L+R ++ P K P +L++E+ D Sbjct: 149 GSGNIIKNEVLFRIRVHPETKVGD------LPLKKKRELVKEVVNYSF-----------D 191 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 ++H ++ + T + C C ++ R TFYCT CQ Sbjct: 192 FLHWKKEYKLKEHWLA---HTKKIC-PRCHIPFQKAYIGTTKRRTFYCTNCQ 239 >gi|294626227|ref|ZP_06704832.1| DNA-formamidopyrimidine glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599492|gb|EFF43624.1| DNA-formamidopyrimidine glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 275 Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 89/293 (30%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TQAFVGRRIVRVSGNSKQ--------DIARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +H + GS+ I + + ++ + Sbjct: 77 LIEFAHFS-VRIHFLLFGSYRINEDKPN-------------------AVPRLCLEFSKGQ 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 R F ++ + + + ++A + +ALL+Q I AG Sbjct: 117 RLNFYACSVQFIERPLDEIYDWTADVMNPLWDAAQARRKLRAAPAMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L + A Sbjct: 177 VGNIIKNEVLHRIRVHPESTVGALPARKLGELVTQARDYSFDFYTWKKAFVL-------- 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ +T G ++ AGR F+C CQ+ Sbjct: 229 ----------KKHYQVHTRTR---CPRDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|300777160|ref|ZP_07087018.1| probable DNA-formamidopyrimidine glycosylase [Chryseobacterium gleum ATCC 35910] gi|300502670|gb|EFK33810.1| probable DNA-formamidopyrimidine glycosylase [Chryseobacterium gleum ATCC 35910] Length = 244 Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 98/291 (33%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +++ NL VT++ N +F+ + G+ + ++ K Sbjct: 1 MPEGPSIILMKENLQPF-AGQQVTEV---SGNAKFE-----KDSFIGQTLREIRTFGKQT 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++ +HL M GS+ I+ + + + + + Sbjct: 52 YL-IFEKAAVRIHLLMFGSYGIDEQTKP------------------DKSLRLALFFPTGS 92 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + V++ + +D + +AL+NQ I +G+ Sbjct: 93 IYFYTCSVKSVDLEFLSTIDWEADVMSDQWNPKKAEEKLKSNPKMMVCDALMNQDIFSGV 152 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R + P +L + RD+V Sbjct: 153 GNIIKNEVLFRIGVQPESLLGNLPAKKRKELIAEARNYSFDFLKWK----------RDFV 202 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-IRRIV-QAGRSTFYCTYCQK 289 + + V+ K+ C CG+ I++ R +F+C QK Sbjct: 203 --------LKKHWLVHTKS--VC-PVCGRKLIKKQTGVGKRRSFFCEKDQK 242 >gi|68478421|ref|XP_716712.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|68478540|ref|XP_716652.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|46438325|gb|EAK97657.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|46438390|gb|EAK97721.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] Length = 322 Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 16/132 (12%) Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEI 221 K +K+ LL+Q AG+GN E L++A + P S I + ++ +L + Sbjct: 185 KKKPIKSLLLDQTYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDSL 244 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQA 277 V +A+ ++G + F + + + + G E + G ++ I Sbjct: 245 IYVCEEAV-----------RVEGDVAKFPDDWLMLHRWGKGRKEKRKTPNGYILDHITVG 293 Query: 278 GRSTFYCTYCQK 289 GR++ YC Q+ Sbjct: 294 GRTSCYCPELQR 305 >gi|302554566|ref|ZP_07306908.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472184|gb|EFL35277.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 99 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQTARRLHDALAGKVLT-----RSDLR--VPRFATADITGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 L +EG L++ HL M G++ + + P H Sbjct: 54 LTRVEGGLTLHSHLRMDGAWKVYANG-RRWGGGPGHQIRA 92 >gi|224535568|ref|ZP_03676107.1| hypothetical protein BACCELL_00432 [Bacteroides cellulosilyticus DSM 14838] gi|224522821|gb|EEF91926.1| hypothetical protein BACCELL_00432 [Bacteroides cellulosilyticus DSM 14838] Length = 173 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 12/179 (6%) Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA-- 170 +++ + + +Y + P +++ F L Sbjct: 1 FLVFTVAMYGFISAYPDGVIDNKYYTISRESISPLSDAYTEAEFEKLFASAKKTLTAKAL 60 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L ++ + G+GN + L+ A + P +K L K +L+K +++ + Sbjct: 61 LATEQRIPGVGNGVTQDILFNAGIHPKQKVIDLSDGQ---KGVLFKSLKDTLMAMT---- 113 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G + G+ G ++ S KT + CG +I + G S +YC CQK Sbjct: 114 -SGRGRDTQTDLYGNEGGYKTILS--SKTWKNPCPRCGSVIVKEAYLGGSVYYCPECQK 169 >gi|224535569|ref|ZP_03676108.1| hypothetical protein BACCELL_00433 [Bacteroides cellulosilyticus DSM 14838] gi|224522807|gb|EEF91912.1| hypothetical protein BACCELL_00433 [Bacteroides cellulosilyticus DSM 14838] Length = 95 Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 4/95 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + V+ T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVLTLSKQANDVLSGKTITQVFNATKPHKFTFYSGDPLEYGKLLVGKTILLSKGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 ++ L GN+ + + G+S + Sbjct: 61 GMFVDFYLSGNVIMNIGDGVSARYYNPGDKVPANY 95 >gi|311272274|ref|XP_001926185.2| PREDICTED: endonuclease 8-like 3 [Sus scrofa] Length = 596 Score = 58.1 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 79/252 (31%), Gaps = 41/252 (16%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G V K L + G ++ +H GM GS I V+ Sbjct: 68 RLLNGHVYSGVETLGKELFMY-FGPKALRIHFGMKGSLAINPLESKSKNG------VSPV 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 K + + D ++ T+ Q + + + + Sbjct: 121 FE--VQLTKDLICFFDSSV----EIRNTAESQQRIRMMEELDVCSPKFSFSRAEREVKKQ 174 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 L + L++QK++ G+GNI EAL+ + L P K L + L++ I Sbjct: 175 GGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQT------HHLVKMIH 228 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----A 277 I + + VY + NCGQ +I Sbjct: 229 DFSILFYRCC-----------KAGSAVSKHYKVYKR------PNCGQCFCKITVCRLGEN 271 Query: 278 GRSTFYCTYCQK 289 R T++C +CQK Sbjct: 272 NRMTYFCPHCQK 283 >gi|109076256|ref|XP_001090459.1| PREDICTED: nei endonuclease VIII-like 3 [Macaca mulatta] Length = 602 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 88/288 (30%), Gaps = 44/288 (15%) Query: 10 IRRNLMMVMKNMTV---TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 +R + + ++ + + + S+ G V K L + G Sbjct: 27 VRGSALRSLQGRALPLAASTAVVSPQASALNNNDASSLFNGYVYSGVETLGKELFMY-FG 85 Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 + +H GM GS +I C KN + + LT + + + D Sbjct: 86 PKAFRIHFGMKGSIMINPLECK--YKNGASPVLEVQLTKD------LICFFDSSVELRNS 137 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 + + + + +K L + L++Q ++ G+GNI Sbjct: 138 M----ESQRRVGMMKELDVCSPEFSFLRAENEVKKQKGRMLGDVLMDQNVLPGVGNIIKN 193 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 EAL+ + L P K L + + + A A Sbjct: 194 EALFDSGLHPAVKVCQLTDEQTHHLVKMIRDFSILFYRCRKAGLAVS------------- 240 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 + VY + NCGQ RI R T++C CQK Sbjct: 241 ----KHYKVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPRCQK 278 >gi|3978498|gb|AAC83371.1| formamidopyrimidine-DNA glycosylase [Mastigocladus laminosus] Length = 52 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE +RR L + + D+ LHR + F +GK I Sbjct: 1 MPELPEVETVRRGLNQFTCHQKIVGADVLLHRTIAYPHAVNDFVTGIQGKAI 52 >gi|323451022|gb|EGB06900.1| hypothetical protein AURANDRAFT_65070 [Aureococcus anophagefferens] Length = 402 Score = 57.7 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 106/326 (32%), Gaps = 58/326 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGK---KIIDVSR 55 MPE PE + R + + V + + P + R + + V Sbjct: 38 MPEGPECHTLSRAMDARLGGGRYAVAAVDVVSGRYAERPPEGLAE-LRDRLPLALERVRC 96 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + K++ EL G S+ LGMSG + + H H ++L ++ + R+ Sbjct: 97 KGKFIYFELAGGASLWSTLGMSGGWTL----------RAGHPHARLALRLASDDDEVRLW 146 Query: 116 YNDPRRFGFMDLVETSLKYQYP-------------------------------PLRTLGP 144 Y+D R FG + + + Sbjct: 147 YHDLRNFGTFKACFDAGLLRDKLESLGLSWLEDGDEAGFEQGRTRERNSKLQSLISRPFS 206 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 ++ F ++ L L++QK AGIGN + E L+ + P + Sbjct: 207 TRFEDRFRGVFAAAAARSPEKKLAVFLMDQKQTAGIGNYLLSEILYATRTWPFAALGDVG 266 Query: 205 QNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 ++ +LI+ + + A G+ D + F + VYG Sbjct: 267 EDRVRAICGEALRLIRASRDAQLVAY---GTPDPRPKLRDLAPLGF--SLEVYG----AS 317 Query: 264 LSNCGQMIRRIV-QAGRSTFYCTYCQ 288 ++ G+ +RR GR+ + Q Sbjct: 318 VAGDGRAVRRDAGPHGRTLHWVEEAQ 343 >gi|302393810|sp|Q8TAT5|NEIL3_HUMAN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase FPG2; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 Length = 605 Score = 57.3 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 47/291 (16%) Query: 10 IRRNLMMVMKNMTV---TDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +R + + ++ + + L D + + G V K L + Sbjct: 27 VRGSALRSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMY 86 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G ++ +H GM G +I KN + + LT + + + D Sbjct: 87 -FGPKALRIHFGMKGFIMINPLEYK--YKNGASPVLEVQLTKD------LICFFDSSVEL 137 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + Q + + + +K L + L++Q ++ G+GNI Sbjct: 138 RNSM----ESQQRIRMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNI 193 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 EAL+ + L P K L + + + A A Sbjct: 194 IKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS---------- 243 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 + VY + NCGQ RI R T++C +CQK Sbjct: 244 -------KHYKVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|7023157|dbj|BAA91860.1| unnamed protein product [Homo sapiens] Length = 605 Score = 57.3 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 88/302 (29%), Gaps = 63/302 (20%) Query: 15 MMVMKNMTVTDIC---LHRKNLR-------------------FDFPHHFSAATRGKKIID 52 V+ VT + L R D + + G Sbjct: 16 ARVLPGQAVTGVRGSALRSPQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSG 75 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 V K L + G ++ +H GM G +I KN + + LT + Sbjct: 76 VETLGKELFMY-FGPKALRIHFGMKGFIMINPLEYK--YKNGASPVLEVQLTKD------ 126 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + D + Q + + + +K L + L+ Sbjct: 127 LICFFDSSVELRNSM----ESQQRIRMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLM 182 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++ G+GNI EAL+ + L P K L + + + A A Sbjct: 183 DQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLAL 242 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYC 287 + VY + NCGQ RI R T++C +C Sbjct: 243 S-----------------KHYKVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHC 279 Query: 288 QK 289 QK Sbjct: 280 QK 281 >gi|158313065|ref|YP_001505573.1| formamidopyrimidine-DNA glycolase [Frankia sp. EAN1pec] gi|158108470|gb|ABW10667.1| Formamidopyrimidine-DNA glycolase [Frankia sp. EAN1pec] Length = 295 Score = 57.3 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 17/158 (10%) Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R ++++ T+ + + D+ + + + + +ALL+Q+++A Sbjct: 31 GYRLPVVEILPTAQEDRVVGHLG-PDVLGDDWDLDRAVANLRAEPTREIGSALLDQRLLA 89 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNI+ EA + A +SP + G A + R Sbjct: 90 GLGNIWRTEACFLAGVSPWTPVGEVNDLEGLV---------------RRAQAMIRAGARG 134 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + VYG+ G PC CG ++RR Q Sbjct: 135 GHQVTTGSARPGEQHWVYGRAGRPC-RRCGTLVRRQEQ 171 >gi|157388969|ref|NP_060718.2| endonuclease 8-like 3 [Homo sapiens] Length = 605 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 47/291 (16%) Query: 10 IRRNLMMVMKNMTV---TDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +R + + ++ + + L D + + G V K L + Sbjct: 27 VRGSALRSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMY 86 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G ++ +H GM G +I KN + + LT + + + D Sbjct: 87 -FGPKALRIHFGMKGFIMINPLEYK--YKNGASPVLEVQLTKD------LICFFDSSVEL 137 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + Q + + + +K L + L++Q ++ G+GNI Sbjct: 138 RNSM----ESQQRIRMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNI 193 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 EAL+ + L P K L + + + A A Sbjct: 194 IKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS---------- 243 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 + VY + NCGQ RI R T++C +CQK Sbjct: 244 -------KHYKVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|22004059|dbj|BAC06479.1| hypothetical protein [Homo sapiens] gi|119625121|gb|EAX04716.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 57.3 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 47/291 (16%) Query: 10 IRRNLMMVMKNMTV---TDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +R + + ++ + + L D + + G V K L + Sbjct: 27 VRGSALRSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMY 86 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G ++ +H GM G +I KN + + LT + + + D Sbjct: 87 -FGPKALRIHFGMKGFIMINPLEYK--YKNGASPVLEVQLTKD------LICFFDSSVEL 137 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + Q + + + +K L + L++Q ++ G+GNI Sbjct: 138 RNSM----ESQQRIRMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNI 193 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 EAL+ + L P K L + + + A A Sbjct: 194 IKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS---------- 243 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 + VY + NCGQ RI R T++C +CQK Sbjct: 244 -------KHYKVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|114596997|ref|XP_526741.2| PREDICTED: endonuclease 8-like 3 [Pan troglodytes] Length = 606 Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 28/156 (17%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + + +K L + L++Q ++ G+GNI EAL+ + L P Sbjct: 150 MMKELDVCSSEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAV 209 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 K L + + + A A + VY + Sbjct: 210 KVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS-----------------KHYKVYKR 252 Query: 259 TGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 NCGQ RI R T++C +CQK Sbjct: 253 ------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 282 >gi|83699625|gb|ABC40719.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 606 Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 28/156 (17%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + + +K L + L++Q ++ G+GNI EAL+ + L P Sbjct: 150 MMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAV 209 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 K L + + + A A + VY + Sbjct: 210 KVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS-----------------KHYKVYKR 252 Query: 259 TGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 NCGQ RI R T++C +CQK Sbjct: 253 ------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 282 >gi|19684059|gb|AAH25954.1| Nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 56.9 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 28/156 (17%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + + +K L + L++Q ++ G+GNI EAL+ + L P Sbjct: 149 MMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAV 208 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 K L + + + A A + VY + Sbjct: 209 KVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALS-----------------KHYKVYKR 251 Query: 259 TGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 NCGQ RI R T++C +CQK Sbjct: 252 ------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|77735931|ref|NP_001029662.1| endonuclease 8-like 3 [Bos taurus] gi|114152087|sp|Q3MHN7|NEIL3_BOVIN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 gi|75775280|gb|AAI05169.1| Nei endonuclease VIII-like 3 (E. coli) [Bos taurus] Length = 606 Score = 56.5 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 86/257 (33%), Gaps = 37/257 (14%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 + H F G V K L + G ++ +H GM GS +I KN Sbjct: 61 NSSHDFLRLFNGHGYSGVETLGKELFMY-FGPKALRIHFGMKGSLVINP--LESKNKNGV 117 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + LT + F + S + Q + F+ Sbjct: 118 SPVFEVQLTKDLICF-----------FDSSVEIRNSTESQQRIRVMEELDVCSPRFSFSR 166 Query: 156 LT-HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 +K L + L++QK++ G+GNI EAL+ + P K L + Sbjct: 167 AESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIHHLVKM 226 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIR 272 + +L GS+L + VY + G+ C C + Sbjct: 227 IR----NFSILFYRCCKVGSALS-------------KHYKVYKRPNCGQCC---CKITVC 266 Query: 273 RIVQAGRSTFYCTYCQK 289 R+ + R T++C +CQK Sbjct: 267 RLGENNRMTYFCPHCQK 283 >gi|296472464|gb|DAA14579.1| endonuclease VIII-like 3 [Bos taurus] Length = 606 Score = 56.5 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 85/257 (33%), Gaps = 37/257 (14%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 + F G V K L + G ++ +H GM GS +I KN Sbjct: 61 NSSQDFLRLFNGHGYSGVETLGKELFMY-FGPKALRIHFGMKGSLVINP--LESKNKNGV 117 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + LT + F + S + Q + F+ Sbjct: 118 SPVFEVQLTKDLICF-----------FDSSVEIRNSTESQQRIRVMEELDVCSPRFSFSR 166 Query: 156 LT-HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 +K L + L++QK++ G+GNI EAL+ + P K L + Sbjct: 167 AESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIHHLVKM 226 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIR 272 + +L GS+L + VY + G+ C C + Sbjct: 227 IR----NFSILFYRCCKVGSALS-------------KHYKVYKRPNCGQCC---CKITVC 266 Query: 273 RIVQAGRSTFYCTYCQK 289 R+ + R T++C +CQK Sbjct: 267 RLGENNRMTYFCPHCQK 283 >gi|194226547|ref|XP_001492738.2| PREDICTED: similar to nei endonuclease VIII-like 3 (E. coli) [Equus caballus] Length = 606 Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 35/256 (13%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D + S G V K L + G ++ +H GM GS II K Sbjct: 60 DSSQNVSRLFDGYVYSGVETLGKELFMY-FGPKALWIHFGMKGSIIINPPEDKK------ 112 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + V+ K + + D ++ Q + + + Sbjct: 113 KDGVSPVFE--VQLTKDLICFFDSSVELR----NSTESQQRIRIMGELDICSPKFSFSRA 166 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + +K L + L++QK++ G+GNI EAL+ + L P K L + Sbjct: 167 ESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHHLVKMI 226 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIRR 273 + + A A + VY + G+ C C + R Sbjct: 227 RDCSILFYKCRKAGCAIS-----------------RHYKVYKRPNCGQCC---CKITVCR 266 Query: 274 IVQAGRSTFYCTYCQK 289 + + R T++C +CQK Sbjct: 267 LGENHRMTYFCPHCQK 282 >gi|282875889|ref|ZP_06284756.1| conserved domain protein [Staphylococcus epidermidis SK135] gi|281294914|gb|EFA87441.1| conserved domain protein [Staphylococcus epidermidis SK135] Length = 74 Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 11/65 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVS 54 I + Sbjct: 61 IKKLK 65 >gi|296195124|ref|XP_002745242.1| PREDICTED: endonuclease VIII-like 3 [Callithrix jacchus] Length = 606 Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 35/256 (13%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D + + G V K L + G ++ +H GM G +I KN Sbjct: 60 DSSQNALSLFNGYVYDGVETLGKELFMY-FGPKALRIHFGMKGCVMINPLEYK--YKNGA 116 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + LT + + + D + Q + + Sbjct: 117 SPVLEMQLTKD------LICFFDSSVELRNSM----ESQQRIRMMKELDVCSPTFSFLRA 166 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + +K L + L++Q + G+GNI EAL+ + L P K L + Sbjct: 167 ESEVKKQKGRMLGDVLMDQSVFPGVGNIIKNEALFDSALHPAVKVCQLTDGQIHHLVKMI 226 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + + A A F VY ++ C C I Sbjct: 227 RDFSILFYRCRKAGLAVS-----------------KHFKVYKRSN--CG-QCHGRITVCR 266 Query: 276 QA--GRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 FGDNNRMTYFCPHCQK 282 >gi|55925237|ref|NP_001007336.1| endonuclease VIII-like 3 [Danio rerio] gi|55250345|gb|AAH85550.1| Nei endonuclease VIII-like 3 (E. coli) [Danio rerio] gi|182888832|gb|AAI64271.1| Neil3 protein [Danio rerio] Length = 550 Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 80/245 (32%), Gaps = 36/245 (14%) Query: 46 RGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 G + V K L + G ++ +H GM+GS I K P + I LTN Sbjct: 48 TGGEFTGVETLGKELFMY-FGVRALRLHFGMNGSMRINPLKKDLHGKPPV---LVIQLTN 103 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN- 164 + F + S + + F+ + Sbjct: 104 DAICF-----------FDTTVEIRLSEDCEQKVRAMEALDICSPKFSFSRAVEAVKTERA 152 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + LL+Q ++ G+GNI EAL+ + L+P K L + + + Sbjct: 153 RMLCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQVHHLVKMTRDFTLLFYK 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFY 283 +GS Y + VY + C G + R+ GR T+Y Sbjct: 213 CRK---------------NGSPLY--KHYKVYKRPN--CGQCSGTVTVCRLGDNGRMTYY 253 Query: 284 CTYCQ 288 C CQ Sbjct: 254 CQRCQ 258 >gi|328479631|gb|EGF48819.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus rhamnosus MTCC 5462] Length = 142 Score = 55.4 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + + RR KYLLI L ++I+ HL M G + + + K H+HVT + + Sbjct: 2 GAAVTTIDRRGKYLLIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDK---HDHVTFTFQDG 58 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + ++ Y D R+FG M L+ T + P L LGPEP +F+ + + + Sbjct: 59 S-----QLRYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKA 113 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +K+ LL+Q +VAGIGNIY E LW +KL+ Sbjct: 114 IKSVLLDQTVVAGIGNIYADEVLWLSKLN 142 >gi|281332206|ref|NP_001163817.1| endonuclease VIII-like 3 [Rattus norvegicus] Length = 606 Score = 55.4 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 84/260 (32%), Gaps = 45/260 (17%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 + F+ G V K L + G ++ +H GM GS +I C Sbjct: 63 WKVLRLFN----GCVYSGVETLGKELFMY-FGPRALRIHFGMKGSILINPPKCENR---- 113 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL---GPEPADNSF 151 + + V + F V+ + + + Sbjct: 114 -----------GGVSPAFEVQLTNDLICFFDSSVKLRNSVESQQRVRMMEGLDVCSPKFS 162 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + + +++ L + LL+Q+++ G+GNI EAL+ + L P K L Sbjct: 163 LSRAESEVKKQRDRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPTVKVCQLSDKQAHHL 222 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 + + + A GS++ + VY + P + C I Sbjct: 223 VKMTRDFSILFYRCRKA----GSAIS-------------KHYKVYKR---PNCAQCHCKI 262 Query: 272 RRIVQA--GRSTFYCTYCQK 289 R R T++C +CQK Sbjct: 263 RVCRLGENSRMTYFCPHCQK 282 >gi|160774311|gb|AAI55158.1| Neil3 protein [Danio rerio] Length = 568 Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 81/245 (33%), Gaps = 36/245 (14%) Query: 46 RGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 +G + V K L + G ++ +H GM+GS I K P + I LTN Sbjct: 48 KGGEFTGVETLGKELFMY-FGVRALRLHFGMNGSMRINPLKKDLNGKPPV---LVIQLTN 103 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN- 164 + F + S + + F+ + Sbjct: 104 DAICF-----------FDTTVEIRLSEDCEQKVRAMEALDICSPKFSFSRAVEAVKTERA 152 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + LL+Q ++ G+GNI EAL+ + L+P K L + + + Sbjct: 153 RMLCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQVHHLVKMTRDFTLLFYK 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFY 283 +GS Y + VY + C G + R+ GR T+Y Sbjct: 213 CRK---------------NGSPLY--KHYKVYKRPN--CGQCSGTVTVCRLGDNGRMTYY 253 Query: 284 CTYCQ 288 C CQ Sbjct: 254 CQRCQ 258 >gi|312890269|ref|ZP_07749808.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Mucilaginibacter paludis DSM 18603] gi|311297249|gb|EFQ74379.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Mucilaginibacter paludis DSM 18603] Length = 244 Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 86/289 (29%), Gaps = 52/289 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I + L+ K TV + L + G+ I D K Sbjct: 1 MPEGPSI-VILKELVQPFKGKTVEKAAGNSTKL-------DTGKLAGQTITDFKSWGKNF 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + I +HL + GS+ I + + + ++D Sbjct: 53 FICFDQFS-IRIHLMLFGSYRINEHKDSPA--------------------RLSLQFDDGE 91 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + E + A L+ + N +AL++Q + AG+ Sbjct: 92 LNFYTCIAELIEQPLDDLYDWSADIMNPAWDVAKALSKMKAQPNMLACDALMDQHLFAGV 151 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R +L P+ K + + +++ Sbjct: 152 GNIIKNEVLFRIRLHPLSKLGKIPDEKLEEMAQEAAIYGF-----------------EFL 194 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYC 287 ++ + T + C + R FYC C Sbjct: 195 KWKKEFTLKKHWLA---HTKKIC-PRDDVPFIKDKLGKSNRRCFYCEVC 239 >gi|146301106|ref|YP_001195697.1| formamidopyrimidine-DNA glycolase [Flavobacterium johnsoniae UW101] gi|146155524|gb|ABQ06378.1| Formamidopyrimidine-DNA glycolase [Flavobacterium johnsoniae UW101] Length = 243 Score = 55.0 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 53/291 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I++ + + ++ + + K I+ K+ Sbjct: 1 MPEGPSILILKEEVQQF-AGKRIIEVSGN--------ASIDLERLQDKTILSFKTWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +I +HL M G++ I + + +++ Sbjct: 52 LI-CFDDFTIRIHLMMFGTYRINEKKE--------------------TAPRLHLGFSNGE 90 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + ++ +N N + +A+L+Q I +G+ Sbjct: 91 INFYTCSIKVLEGAVDQYYDWSEDVLNENWNPKKAKISLDKIPNEKICDAILDQNIFSGV 150 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R + P + + Sbjct: 151 GNIIKNEVLYRCFVHPESLVGKIPPEKIDELIAECSIYSFEFLYWK-------------- 196 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQK 289 + + Y + + C C + + R +F+CT CQ+ Sbjct: 197 ----KKFELKKHWLAYSQ--KEC-KRCSLPMIKKPTGKKKRRSFFCTNCQQ 240 >gi|332255198|ref|XP_003276719.1| PREDICTED: endonuclease 8-like 3 [Nomascus leucogenys] Length = 606 Score = 54.6 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 28/156 (17%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + + +K L + L++Q ++ G+GNI EAL+ + L P Sbjct: 150 MMKELDVCSPEFSFLRAESELKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAV 209 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 K L + + + A A + VY + Sbjct: 210 KVFQLTDEQTHHLVKMIRDFSILFYRCRKAGLALS-----------------KHYKVYKR 252 Query: 259 TGEPCLSNCGQMIRRIVQ-----AGRSTFYCTYCQK 289 NCGQ R+ R T++C +CQK Sbjct: 253 ------PNCGQCHCRVTVCRFGDNNRMTYFCPHCQK 282 >gi|49257706|gb|AAH74457.1| LOC443713 protein [Xenopus laevis] Length = 323 Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 22/212 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPH-HFSAATRGKKIIDVS 54 MPE PE+ + V K ++ ++ F P S+ +RGK++ + Sbjct: 1 MPEGPELHRASLFVNKVCKGLSFAGAVEKSAVSKNTDVPFSCPEYTISSVSRGKEVKLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L + I+ GMSGSF + P+H H+ ++ + + Sbjct: 61 TP----LSDESEETHIVFRFGMSGSFKFTPQD-----QIPKHAHLRFY---TKDSPQRVL 108 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + DPRRFG ++ + + P + + +N + + + +LNQ Sbjct: 109 CFVDPRRFGTWEVHGSWQPERGPCVIQEYEKFRENVLKNLSDKAF----DKPICEVMLNQ 164 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 K GIGN E L+R ++ P RS+++ Sbjct: 165 KYFNGIGNYLRAEILFRLEIPPFTPARSVLEA 196 >gi|190344984|gb|EDK36784.2| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 16/132 (12%) Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K +K+ LL Q++ +G+GN E ++ A+L P S I N+G ++ +L + Sbjct: 202 KKKPIKSMLLEQELFSGVGNWVADEIIYHARLHPNEVISSKISNDGNVSQVIKELYNALI 261 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQ-NAFSVY----GKTGEPCLSNCGQMIRRIVQA 277 V + ++G + F N Y G+ E + G + Sbjct: 262 YVCEYCV-----------SVEGEVTQFPDNWLMPYRWGKGRKQEKSKTKEGYQVDHGTVG 310 Query: 278 GRSTFYCTYCQK 289 GR++ + QK Sbjct: 311 GRTSCFVPELQK 322 >gi|146423146|ref|XP_001487505.1| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 54.2 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 16/132 (12%) Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K +K+ LL Q++ +G+GN E ++ A+L P S I N+G ++ +L + Sbjct: 202 KKKPIKSMLLEQELFSGVGNWVADEIIYHARLHPNEVISSKISNDGNVSQVIKELYNALI 261 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQ-NAFSVY----GKTGEPCLSNCGQMIRRIVQA 277 V + ++G + F N Y G+ E + G + Sbjct: 262 YVCEYCV-----------SVEGEVTQFPDNWLMPYRWGKGRKQEKSKTKEGYQVDHGTVG 310 Query: 278 GRSTFYCTYCQK 289 GR++ + QK Sbjct: 311 GRTSCFVPELQK 322 >gi|294658546|ref|XP_460888.2| DEHA2F12034p [Debaryomyces hansenii CBS767] gi|202953211|emb|CAG89238.2| DEHA2F12034p [Debaryomyces hansenii] Length = 426 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 17/133 (12%) Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K +K+ LL Q+ AG+GN E ++ A++ P S I + I+ +L + Sbjct: 277 KKKPIKSLLLEQEFFAGVGNWVGDEIIYHARIHPNEVLSSKIPKGDSVDSIIERLYNSLL 336 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQ-NAFSVYG----KTGEPCLSNC-GQMIRRIVQ 276 V ++ ++G + F N +Y + P G + + Sbjct: 337 YVCELSV-----------RVEGDVSQFPSNWLMIYRWGKRRKNSPKPKTDEGYEVDHVTV 385 Query: 277 AGRSTFYCTYCQK 289 GR++ + QK Sbjct: 386 GGRTSCFVPKLQK 398 Score = 52.3 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 17/104 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----------FSAATRGKKI 50 MPE+ EV + + + ++ + ++ L F F + + G + Sbjct: 1 MPEVAEVAHVCALMRRNLLGFRISKVKMNNDPLLFPFLKNNPNAEQELADLQSKLTGSTV 60 Query: 51 IDVSRRAKYLLIE-------LEGNLSIIVHLGMSGSFIIEHTSC 87 V R KY + + +++H GM+G I + Sbjct: 61 KSVGRHGKYFWLRLSLNKESKDETGVLLMHFGMTGMIKIRNVKS 104 >gi|167535061|ref|XP_001749205.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772358|gb|EDQ86011.1| predicted protein [Monosiga brevicollis MX1] Length = 659 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 81/284 (28%), Gaps = 42/284 (14%) Query: 11 RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL-- 68 RR L+ N RF + A G+ + + K L Sbjct: 159 RRRLLK-------KRFVCTSPNGRF---VEGARAIDGQPLSRIEVHGKNLFYFFGPRPEA 208 Query: 69 ----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + VH GMSG F + A + L N + R Sbjct: 209 ANVAIVHVHFGMSGRFAVFDLDKA----PEPTATTRLRLVNEQAGLVAHLSAMTVRLLDL 264 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + G +P + L + ++ L++Q G+GNIY Sbjct: 265 AGYKAKAREL--------GEDPLRSDAQPSVLWPRVKASRKSIGALLMDQ----GVGNIY 312 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+++ + P L + L+ + GS L Sbjct: 313 RAEILFKSGVHPEIPAALLEEEQFETIWRHAVLLLQRG-------FEVGSILTVDPEEAR 365 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G + +Y + C +R + R+ + C CQ Sbjct: 366 RLGRPKMRRYIY---NQKHCGRCRGPVRSWIINARTCYACPTCQ 406 >gi|145610627|ref|XP_001410525.1| hypothetical protein MGG_11447 [Magnaporthe oryzae 70-15] gi|145018007|gb|EDK02286.1| hypothetical protein MGG_11447 [Magnaporthe oryzae 70-15] Length = 359 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 79/233 (33%), Gaps = 20/233 (8%) Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +G I ++ + P++ + + + T + D RR Sbjct: 20 THNKGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQDGTAA-----AFTDARR 74 Query: 122 FGFMDLVETSLKYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 FG + LV+ P + F A YL + + +K LL+Q ++ Sbjct: 75 FGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKMRSRRVPVKALLLDQAVI 134 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSL 236 +G+GN E L++A+L P + + + + L D+ L Sbjct: 135 SGVGNWVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDVCVLACDKLADSDLFPDDWL 194 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G+ +TGE G+ + + GR++ Y QK Sbjct: 195 FNHRWGKGAAS----------RTGEQARLPGGERLAFLTVGGRTSCYAPELQK 237 >gi|255536224|ref|YP_003096595.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] gi|255342420|gb|ACU08533.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] Length = 244 Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 104/296 (35%), Gaps = 62/296 (20%) Query: 1 MPELPEVEIIRRNLMMVM---KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE P NL + K TVTD + G+K++ + Sbjct: 1 MPEGP----TILNLTSKISRFKGKTVTDAT--------GYAEMDKTGIAGQKLMAIDAYG 48 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K + + + + VHLG+ GS +I + + + ++ Sbjct: 49 KNFIF-VFKDFFVTVHLGLFGSMLINKRK--------------------KSNASFALHFD 87 Query: 118 DPR-RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D F + + K Q + T Q + +AL++Q + Sbjct: 88 DKEINFYIANTKKIDGKPQDHFNYNTDILKKTFDGEYVLSTLQEKYAEKMIGDALMDQDL 147 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 G+GNI E+L+RAK+ P R++ + KL+ I+ V+ A + S Sbjct: 148 FTGVGNIIRVESLYRAKIHPESVIRNIPEK---------KLVFLIETVVNYAYEFLEQSK 198 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQK 289 D V + +YGK + C + ++I G R T+ C CQK Sbjct: 199 EDTV---------KEKTLIYGK--KICPKDKWELIIEE--MGKVKRKTYVCPKCQK 241 >gi|72055880|ref|XP_798656.1| PREDICTED: similar to heat shock protein protein [Strongylocentrotus purpuratus] gi|115664558|ref|XP_001178758.1| PREDICTED: similar to heat shock protein protein [Strongylocentrotus purpuratus] Length = 684 Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 88/313 (28%), Gaps = 43/313 (13%) Query: 1 MPELPEVE----IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPE P V R+ + + V + + R+ RG I V Sbjct: 174 MPEGPSVRRWGDTARQFIHKRI--KVVRGVSKVMERERW----------RGACINAVVVY 221 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K L + L N SG+ + ++ K +K I +++ +Y + Sbjct: 222 GKQLFLHLLQNSP--SGNDTSGNSEPDTSARKKTMKACDLKEENIDDRDDSIWYRYHFLM 279 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R K P P + F+ + + + + Sbjct: 280 WGSLRANEYKEPSKRSKRAKKSEAPKAPNPMVEFYFEDKTFLVFYGGSIRIVDGPCEDEG 339 Query: 177 VAGIGNIYVCEALWRAKLSP------------IRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + + E A L P ++++N ++ L Sbjct: 340 TDVLSETFDFEKAATALLKPIPICYTIMDQMHFAGAGNIVKNEVLYACRMHPLELGSNLT 399 Query: 225 LIDAIDAGGSSLR---DYVHIDGSIGYFQN---AFSVYGKTGEPCLSNCGQMIRRIVQAG 278 +A+ +R D++ + + +Q +Y K P G R Sbjct: 400 RSEAVQLAEEVVRFTKDWLKWEEELPEYQKFGSWLKMYWKFKCP----DGHKTMRGFFGD 455 Query: 279 ---RSTFYCTYCQ 288 R T +C CQ Sbjct: 456 ELKRMTMWCPECQ 468 >gi|158937427|sp|Q5UNW7|YL720_MIMIV RecName: Full=Endonuclease 8-like L720; AltName: Full=Endonuclease VIII-like L720 Length = 274 Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 74/285 (25%), Gaps = 38/285 (13%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE----LEGNLSII 71 KN + I + I KY+ + + I Sbjct: 15 RHTKNHRIVSIS-------GPSYKRMNVDLIDYIIRKWWFAGKYIYLMLISSNKPTYVIR 67 Query: 72 VHLGMSGSFIIEHTSCAKPIKNP-----QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 H+ M G ++ + + + T + Sbjct: 68 THMMMHGRILVGNQDSPTKRAFMIIQLDNDIVLRWYRSQITLLDPNCLAEIKTNYTICTT 127 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 + N F + + + + LL+Q+ G+GNI Sbjct: 128 RQAIMDSIKLMKYDLSNNRFDYNLFQSHLKNGINIHSSEIITDFLLDQEYFPGVGNILQQ 187 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 EAL+ K+ P++K + + + L K+I + + G Sbjct: 188 EALYDCKILPLKKVQDIDEPMFDCLCNSLKKIIDLLYESYKF-------------RESGK 234 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 F +Y K+ P G R R T +C CQ Sbjct: 235 --EFGPILRIYRKSLCPL----GHKTIRKKIGLRNRMTTWCPVCQ 273 >gi|239928563|ref|ZP_04685516.1| DNA glycosylase [Streptomyces ghanaensis ATCC 14672] Length = 93 Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 G VYG+ PCL C IR Q GR T++C CQ Sbjct: 30 TGLSDPDLFVYGRASRPCL-RCRTPIRLADQGDGSRGRPTYWCPVCQ 75 >gi|196001059|ref|XP_002110397.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] gi|190586348|gb|EDV26401.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] Length = 408 Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 31/221 (14%) Query: 1 MPELPEVEIIRRNLMM-----VMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKII--- 51 MPE PEV + + + V ++ F P + +RGK+++ Sbjct: 1 MPEGPEVRLASDYINHICCNVIFSGQIVKSDVSKNPSITFAAPFYTITGQSRGKELLLTL 60 Query: 52 --------DVSRRAKYLL--IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + + + + I+ GMSGSF + + P+H+H+ Sbjct: 61 KEADANNGNSEEMNHRVKKECDSRLEMRILFGFGMSGSFSVTDSDN-----IPKHSHLRF 115 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 N ++ + + DPRRFG + + P +N + Sbjct: 116 YAHNKSS---MVLNFVDPRRFGTWRVTNNWSPNRGPDAAFEYELFCNNIAS----HLNAS 168 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 N + LL+QK GIGN E L+RA + P R+ Sbjct: 169 LFNKPICEVLLDQKYFNGIGNYLRAEILYRAGIPPFTMARN 209 >gi|50555437|ref|XP_505127.1| YALI0F07623p [Yarrowia lipolytica] gi|49650997|emb|CAG77934.1| YALI0F07623p [Yarrowia lipolytica] Length = 446 Score = 53.1 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPEL EV V + + + F A +G+ I +VSR Sbjct: 1 MPELGEVAHAASVFAKFATGKKVAEADVQPDKIVFGSETGHEALQKALQGRVITNVSRHG 60 Query: 58 KYLL--IELEGNLSIIVHLGMSGSFIIEHTSC 87 KY ++ + + ++++H GM+G ++ Sbjct: 61 KYWWLTLDGDADNAVLLHFGMTGYISVKGHRT 92 >gi|311978129|ref|YP_003987249.1| endonuclease VIII-like protein [Acanthamoeba polyphaga mimivirus] gi|55417330|gb|AAV50980.1| hydrolysis of DNA containing ring-opened N7 methylguanine [Acanthamoeba polyphaga mimivirus] gi|308204565|gb|ADO18366.1| endonuclease VIII-like protein [Acanthamoeba polyphaga mimivirus] Length = 317 Score = 52.7 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 74/285 (25%), Gaps = 38/285 (13%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE----LEGNLSII 71 KN + I + I KY+ + + I Sbjct: 58 RHTKNHRIVSIS-------GPSYKRMNVDLIDYIIRKWWFAGKYIYLMLISSNKPTYVIR 110 Query: 72 VHLGMSGSFIIEHTSCAKPIKNP-----QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 H+ M G ++ + + + T + Sbjct: 111 THMMMHGRILVGNQDSPTKRAFMIIQLDNDIVLRWYRSQITLLDPNCLAEIKTNYTICTT 170 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 + N F + + + + LL+Q+ G+GNI Sbjct: 171 RQAIMDSIKLMKYDLSNNRFDYNLFQSHLKNGINIHSSEIITDFLLDQEYFPGVGNILQQ 230 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 EAL+ K+ P++K + + + L K+I + + G Sbjct: 231 EALYDCKILPLKKVQDIDEPMFDCLCNSLKKIIDLLYESYKF-------------RESGK 277 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 F +Y K+ P G R R T +C CQ Sbjct: 278 --EFGPILRIYRKSLCPL----GHKTIRKKIGLRNRMTTWCPVCQ 316 >gi|134023849|gb|AAI35400.1| LOC100124806 protein [Xenopus (Silurana) tropicalis] Length = 322 Score = 52.7 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 26/214 (12%) Query: 1 MPELPE-------VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIID 52 MPE PE V + L ++ F+ P S+ +RGK++ Sbjct: 1 MPEGPELHLASLFVNKVCNGL--HFAGAVEKSAVSKNTDVPFNCPEYTISSVSRGKEVKL 58 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + L + II GMSGSF + P+H H+ + + Sbjct: 59 ILTP----LSDGSEETHIIFRFGMSGSFKFTPPD-----QIPKHAHLRFY---TKDAPCH 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + DPRRFG + + + P + + + + + + +L Sbjct: 107 VLCFVDPRRFGTWVVHGSWQPERGP----CVMQEYEKFRENVLKNLSDNVFDKPICEVML 162 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 NQK GIGN E L+R + P RS+++ Sbjct: 163 NQKYFNGIGNYLRAEILFRLAIPPFIPARSVLEA 196 >gi|302842791|ref|XP_002952938.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] gi|300261649|gb|EFJ45860.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] Length = 686 Score = 52.3 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 10/207 (4%) Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 + TS + T + M + SL+ Sbjct: 1 MYVCTSAIGWRPPTGGFFWDEHSSLGPLTVASGMEMGLVAHLSAMTVTHGSLELYTRKAA 60 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGP+P + L + + + L++Q +VAG+GNIY E L++A + P Sbjct: 61 QLGPDPLREDADKELLRAKVARSRKPIGLVLMDQSMVAGVGNIYRAEILFKAGVHPELPA 120 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 L + ++ +L +G D +G +Y + Sbjct: 121 CDLTSDQFD------RIWYHTVSLLQRGFVSGSILTVDGWEA-KVLGRPWTRRYIYNQ-- 171 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + C C +R AGR+ + C C Sbjct: 172 QVCG-RCKGPVRTWQMAGRTVYCCENC 197 >gi|291009150|ref|ZP_06567123.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 52.3 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 17/209 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLAQLHQKRYGGAAVRVGSPQGRFAAS---AALLDGSVLRRAEAHGKHLFHF 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F ++ + V + + +T+ R Sbjct: 58 HGPDRVVHVHLGLYGTFT-----ESELPMDEPRGQVRMRIVGDTHGTDLR-------GPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P + + + +++ LL+QK++AG GN+ Sbjct: 106 ACELLTDAEVEA--LRDRLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 Y E L+R + P R L + Sbjct: 164 YRAEVLFRHGIPPRTPGRDLGRERWDLVW 192 >gi|321463206|gb|EFX74223.1| hypothetical protein DAPPUDRAFT_57329 [Daphnia pulex] Length = 294 Score = 52.3 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 97/273 (35%), Gaps = 24/273 (8%) Query: 1 MPELPEVEIIRRNLMMVMK-----NMTVTDICLHRKNLRFDFPH-HFSAATRGKKI-IDV 53 MPE PE+ I + MK + + +D P A +RGK++ + + Sbjct: 1 MPEGPELHISSLFINDSMKDLIFSGKILKSEVSKNPVVEWDVPLYTIKAESRGKEMKLWL 60 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-SLTNNTNTKKY 112 + +SI+ GMSG F + P+H+H+ ++T ++ Sbjct: 61 EEYSPDKKGRQLEKISILFRFGMSGCFKLSTVDD-----IPKHSHLRFLTITKDSEIPIQ 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + D RRFG + + P T N N + K + LL Sbjct: 116 VLNFVDFRRFGRWEKNADWGSDRGPCPITDYETFRKNIVNNLEDPAF---KQKAICEVLL 172 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKT----RSLIQNNGTPKDILYKL-IQEIQKVLID 227 NQK GIGN E L+R+K++P + + P L I + L Sbjct: 173 NQKFFNGIGNYLRAEILFRSKIAPFDEAYSVLCKWKDSATYPIKSEKVLPIVKDPLYLCH 232 Query: 228 AIDAGGSSLR---DYVHIDGSIGYFQNAFSVYG 257 A+ L D + G F+N Y Sbjct: 233 AVCMEVLKLSGGYDVENGLKDHGAFENWLQCYQ 265 >gi|170671944|ref|NP_001116270.1| nei endonuclease VIII-like 1 [Xenopus (Silurana) tropicalis] gi|170285164|gb|AAI61437.1| LOC100124806 protein [Xenopus (Silurana) tropicalis] Length = 434 Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 77/214 (35%), Gaps = 26/214 (12%) Query: 1 MPELPE-------VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIID 52 MPE PE V + L ++ F+ P S+ +RGK++ Sbjct: 1 MPEGPELHLASLFVNKVCNGL--HFAGAVEKSAVSKNTDVPFNCPEYTISSVSRGKEVKL 58 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + L + II GMSGSF + P+H H+ + + Sbjct: 59 ILTP----LSDGSEETHIIFRFGMSGSFKFTPPD-----QIPKHAHLRFY---TKDAPCH 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + DPRRFG + + + P + + + + + +L Sbjct: 107 VLSFVDPRRFGTWVVHGSWQPERGP----CVMQEYEKFRENVLKNLSDKVFDKPICEVML 162 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 NQK GIGN E L+R + P RS+++ Sbjct: 163 NQKYFNGIGNYLRAEILFRLAIPPFIPARSVLEA 196 >gi|19353217|gb|AAH24921.1| Nei like 3 (E. coli) [Mus musculus] Length = 606 Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 28/131 (21%) Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + L + LL+Q+++ G+GNI EAL+ + L P K L + + + Sbjct: 175 DRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLSDKQARHLVKMTRDFSILFY 234 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ-----AG 278 A GS++ VY + NCGQ +I Sbjct: 235 RCCKA----GSAIS-------------KHCKVYKR------PNCGQCHSKITVCRFGENS 271 Query: 279 RSTFYCTYCQK 289 R T++C +CQK Sbjct: 272 RMTYFCPHCQK 282 >gi|255727312|ref|XP_002548582.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] gi|240134506|gb|EER34061.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] Length = 286 Score = 51.9 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 17/168 (10%) Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 V + K +K+ LL+Q AG+GN E Sbjct: 115 VPPKQTKPFVFGDPDPDHHGRPRLTIYEFNKLILSKKKPIKSLLLDQAFFAGVGNWVGDE 174 Query: 188 ALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 +++A++ P + I N+ ++ KL + V +A+ G + + Sbjct: 175 IVFQARIHPNEVISNKIANDGSDDIHPVVQKLYDSLISVCEEAVLVEGDTSK-------- 226 Query: 246 IGYFQNAFSVY----GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +N +Y G+ + G + + GR++ YC QK Sbjct: 227 --FPKNWLMLYRWGKGRKEKRKTPQ-GYSLDHVTVGGRTSCYCPDLQK 271 >gi|302695915|ref|XP_003037636.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8] gi|300111333|gb|EFJ02734.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8] Length = 267 Score = 51.9 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 78/219 (35%), Gaps = 33/219 (15%) Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + I P+ + + T ++ + D RR G + L + P+ Sbjct: 14 YYISSKRLVGDEWPPRFMKFILHFFDGT-----QLAFMDARRLGRIRL--CADPLHETPI 66 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LG +P + + ++ +K LL+Q AG+GN E L+ A++ P R+ Sbjct: 67 SELGFDPILSMPSRQDFEKLMTRRKCPVKALLLDQSFSAGVGNWVADEILYHARVHPERR 126 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 +L L L + + +V A++A S + F + + K Sbjct: 127 CNTLTGEE------LDGLHRWMGEVCRIAVEADADSEKFPEDW-----LFNHRWDKGKKN 175 Query: 260 ---------GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GEP I+ + GR++ Y QK Sbjct: 176 KPQTMTLPSGEP------ATIKWVTVGGRTSAYVDELQK 208 >gi|22122759|ref|NP_666320.1| endonuclease 8-like 3 [Mus musculus] gi|56404613|sp|Q8K203|NEIL3_MOUSE RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase FPG2; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 gi|21961370|gb|AAH34753.1| Nei like 3 (E. coli) [Mus musculus] gi|24475412|dbj|BAC22661.1| putative DNA glycosylase [Mus musculus] gi|148703690|gb|EDL35637.1| nei like 3 (E. coli) [Mus musculus] Length = 606 Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 22/128 (17%) Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + L + LL+Q+++ G+GNI EAL+ + L P K L + + + Sbjct: 175 DRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLSDKQACHLVKMTRDFSILFY 234 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRST 281 A GS++ VY + P C I R T Sbjct: 235 RCCKA----GSAIS-------------KHCKVYKR---PNCDQCHSKITVCRFGENSRMT 274 Query: 282 FYCTYCQK 289 ++C +CQK Sbjct: 275 YFCPHCQK 282 >gi|239928562|ref|ZP_04685515.1| DNA glycosylase [Streptomyces ghanaensis ATCC 14672] Length = 54 Score = 51.5 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T R +LR P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVRQAARRLHDALAGRVLT-----RSDLR--VPKYATADLTGRTVLDVTARGKHL 53 >gi|239982671|ref|ZP_04705195.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291454520|ref|ZP_06593910.1| endonuclease VIII Nei [Streptomyces albus J1074] gi|291357469|gb|EFE84371.1| endonuclease VIII Nei [Streptomyces albus J1074] Length = 83 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T +LR P + G+ +++V R K+L Sbjct: 1 MPEGDTVHQAAGRLHQALAGQELTV-----SDLR--VPRLATVDLTGRTVVEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC 87 L LEG L++ HL M GS+ I Sbjct: 54 LTRLEGGLTLHSHLRMDGSWRIFAPGE 80 >gi|7272370|gb|AAA18569.2| formamidopyrimidine DNA N-glycosylase [Synechococcus elongatus PCC 6301] Length = 47 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-----CLHRKNLRFDFPHHFSAATR 46 MPELPEVE +RR L T+ + L + + P F A + Sbjct: 1 MPELPEVETVRRGLTQ----QTLQRVCTGGEVLLSRTIATPTPELFLVALQ 47 >gi|61316457|ref|NP_001013021.1| endonuclease 8-like 2 [Bos taurus] gi|56404518|sp|Q6IE77|NEIL2_BOVIN RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|50841453|tpe|CAE48362.1| TPA: NEIL2 protein [Bos taurus] gi|296484952|gb|DAA27067.1| nei like 2 [Bos taurus] Length = 329 Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 68/226 (30%), Gaps = 39/226 (17%) Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 + V G+ GS + S AK + + + F Sbjct: 124 RWLQVSFGLFGSIRVNEFSRAKKAN--------KRGDWRDPVPRLVLHF-SGSGFLAFYN 174 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + + ++ P + ++ L ++ + LL+Q+ +G+GNI E Sbjct: 175 CQMTWRFSSPVVSPASDILSEKFHRGQALEALGREQP--ICYTLLDQRYFSGLGNIIKNE 232 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+RA + P+ L L+ + D + G Sbjct: 233 ALFRAGIHPLSPGS------LLGLPRLEALVDHVVAFSADWLQ-------------GKFQ 273 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G + R R T++C CQ Sbjct: 274 GTRQHTQIYQKEQCP----AGHQVVRESLGPPGGFQRLTWWCPQCQ 315 >gi|156374930|ref|XP_001629836.1| predicted protein [Nematostella vectensis] gi|156216845|gb|EDO37773.1| predicted protein [Nematostella vectensis] Length = 290 Score = 50.4 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 91/271 (33%), Gaps = 25/271 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-DICLHRKNLRFDFPHH------FSAATRGKKIIDV 53 MPE PE+ + + K T I N + H A +RGK++ + Sbjct: 1 MPEGPELHKAALLVNTMCKGRVFTGKIKKSAANYKNPEVEHNYKEYTIRAESRGKEMAVI 60 Query: 54 SR----RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 + G+L I+ GMSG F + +H H+ Sbjct: 61 LSGYPLANDKKRAKKNGDLRILFRFGMSGRFQFGPVD-----EMHKHAHLNFYTKTEKKD 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 K + + D RRFG + +T + + P +N N + N L Sbjct: 116 KGLVLSFVDVRRFGGWQVKDTWSEDRGPDPMFEYQAFRENVLNNLDS----SVFNKPLCE 171 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY----KLIQEIQKVL 225 L NQ+ GIGN E ++R+ + P R ++++ + L++ V Sbjct: 172 VLHNQRYFNGIGNYLRAEIIFRSGIPPFTCARDVLESLQVYPEEKKPCTPDLLELCHLVP 231 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + ++ G G FQ Y Sbjct: 232 REVVNLPGVGYEPSGSYSG-YSRFQEWLQCY 261 >gi|255532507|ref|YP_003092879.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Pedobacter heparinus DSM 2366] gi|255345491|gb|ACU04817.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Pedobacter heparinus DSM 2366] Length = 244 Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 92/291 (31%), Gaps = 54/291 (18%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE P + I+R + + ++ ++ N + + K+ K+ Sbjct: 1 MPEGPSIVILRELIEELDLEGQ---EVIALSGNTKIE-----KDRMLHHKVKAFKSWGKH 52 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI E + +H M G++ I + + + + Sbjct: 53 FLICFENFS-LRIHFMMFGTYRINERKQTPA--------------------RLSLSFENA 91 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + ++ A+ L K + + + LL+Q+I +G Sbjct: 92 ELNFYTCSLKYVEGDVNVNYDWSSDIMAEQWDPKKALKKMKTKSQALICDLLLDQEIFSG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R + P + P L LI E ++ D+ Sbjct: 152 LGNIIKNEVLYRVGIHPS------SVIDSIPVAKLKLLITEARQYSF-----------DF 194 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 ++ + ++ V + + C + + R TF+C CQ Sbjct: 195 LNWKKAHVLKKHWL-VNTR--QFCPL--KHPLIKSYLGKTKRRTFFCPVCQ 240 >gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] Length = 683 Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 18/152 (11%) Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 A + N + I ++ E L+RA++ P Sbjct: 55 FAAMWKRRSAPIKTALMDQKIMAGIGNWMADGMFERTRTDDAIASLRSTEILYRARVHPE 114 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 + + + L + + I +V+ A + F + + + Sbjct: 115 TRANEMTDSQ------LEAIRERILEVVTVAC-----------AANSDHDLFPSDWLFHQ 157 Query: 258 KTGEP-CLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G I+ I GR+T Y Q Sbjct: 158 RWGKTDGAKVNGDAIKFIEVGGRTTAYVPKLQ 189 >gi|169835969|ref|ZP_02869157.1| hypothetical protein cdivTM_02456 [candidate division TM7 single-cell isolate TM7a] Length = 52 Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Query: 1 MPELPEVEIIRRNLMMVMKN--MTVTDICL 28 MPELPEVE IRR L ++ + + Sbjct: 1 MPELPEVETIRRGLQDIITGTAKKLFKVRF 30 >gi|255535130|ref|YP_003095501.1| Formamidopyrimidine-DNA glycolase [Flavobacteriaceae bacterium 3519-10] gi|255341326|gb|ACU07439.1| Formamidopyrimidine-DNA glycolase [Flavobacteriaceae bacterium 3519-10] Length = 245 Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 93/291 (31%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + L + + N + + K Sbjct: 1 MPEGPSI----LILKEATQKFIGEKVISATGNAKIAM-----EKLPDLTFEEYRIFGKQS 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G I VHL + GS+ ++ + IK + + + N + +N Sbjct: 52 YL-VFGEAVIRVHLLLFGSYSVD-----EQIKPDRQLRLQLKFPNGD------LYFNSCS 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L+E S+ + +D+ + + LL+Q I +G+ Sbjct: 100 V----KLLERSVLREIDWH---ADVLSDDWKPLKARKKLKLQPERMACDVLLDQNIFSGV 152 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R + P N PK + + + D++ Sbjct: 153 GNIIKNEVLFRIGVHPESLVG-----NLPPKKLSALIFEARNYSF------------DFL 195 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFYCTYCQK 289 +N V+ T + C CG+++ R + R +F+C QK Sbjct: 196 RWKKEYVLKKNWL-VH--TKKTC-PKCGELLTKRHTGLSNRRSFFCEKDQK 242 >gi|31873592|emb|CAD97774.1| hypothetical protein [Homo sapiens] gi|117645994|emb|CAL38464.1| hypothetical protein [synthetic construct] Length = 316 Score = 50.0 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 80/335 (23%), Gaps = 79/335 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V + + V D +H K L RFD Sbjct: 1 MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE 60 Query: 40 HF----------------SAATRGKK-----IIDVSRRAKYLLIELEGNLSIIVHLGMSG 78 G + ++YL + + G Sbjct: 61 EMGPPGSSPTPEPPQKEVQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFG 120 Query: 79 SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP 138 F + K + + + + F + Sbjct: 121 LFGSVWVNDFSRAKKANK-----RGDWRDPSPRLVLHFGGGGFLAFYNC----QLSWSSS 171 Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + + + LL+Q+ +G+GNI EAL+RA + P+ Sbjct: 172 PVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLS 231 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 L + L+ + + + G VY K Sbjct: 232 LGSVLSASRREV------LVDHVVEFSTAWLQ-------------GKFQGRPQHTQVYQK 272 Query: 259 TGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 P G + + R T++C CQ Sbjct: 273 EQCP----AGHQVMKEAFGPEDGLQRLTWWCPQCQ 303 >gi|149692230|ref|XP_001493563.1| PREDICTED: similar to nei endonuclease VIII-like 1 (E. coli) [Equus caballus] Length = 462 Score = 49.6 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 78/216 (36%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + R + + R P SA I S R K Sbjct: 74 MPEGPELHLASRFVNEACGGLVFGGCVEKSPISRNPEVPFESSAYR-----ISASARGKE 128 Query: 60 LLIE---------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L + + L+++ GMSGSF + P H H+ Sbjct: 129 LRLTLSPLPGAQPPQEPLALVFRFGMSGSFQLVPRDM-----LPPHAHLR--FYTAPPGP 181 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + + D RRFG DL + P + + +N + + + A Sbjct: 182 RLALCFVDIRRFGHWDLGGEWQPGRGPCVLLEYEQFRENVLQNLADKAF----DRPICEA 237 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R ++ P K R++++ Sbjct: 238 LLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLEA 273 >gi|149495026|ref|XP_001518546.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli), partial [Ornithorhynchus anatinus] Length = 515 Score = 49.6 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 21/212 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH------HFSAATRGKKIIDVS 54 MPE PE+ + R + V + + R H SA +RGK++ Sbjct: 1 MPEGPELYLASRYVNEVCRGLVFAGAVEKSSVSRNPEVPFCSDSYHISAVSRGKEVKLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L G + ++ GMSGSF + P+H H+ + + Sbjct: 61 TP---LTGTEPGPVDLVFRFGMSGSFRLVPAEA-----LPRHAHLRFY---TAAPCRRAL 109 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG ++ T + P + + +N + N + ALL+Q Sbjct: 110 CFVDVRRFGRWEVQGTWQAGRGPCVLQEYEKFRENVLQNLEDK----VFNKPICEALLDQ 165 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R ++ P + R++++ Sbjct: 166 RFFNGIGNYLRAEILYRLRIPPFERARTVLEA 197 >gi|109085580|ref|XP_001086780.1| PREDICTED: endonuclease VIII-like 2 [Macaca mulatta] Length = 332 Score = 49.6 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 85/346 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V + + V D +H K L RFD Sbjct: 1 MPEGPLVRKFHHLISPFVGQQVVKTGGSSKKLQPAGLQSLWLQDTQVHGKKLFLRFDPDK 60 Query: 40 HFSAAT--------------------------RGKKIIDVSRRAKYLLI---ELEGNLSI 70 A G+K D S ++ L + L Sbjct: 61 EMEAPGSSPPPEPPQKEAQKEGAADPKQAGEPSGQKTPDGSSQSAELNPQGEDESECLEG 120 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI---SLTNNTNTKKYRVIYNDPRRFGFMDL 127 G +G ++ + + + + + + + F + Sbjct: 121 DAPAGDAGRWLRVSFGLFGSVWVNEFSRAKKANKRGDWRDPSPRLVLYFGGGGFLAFYNC 180 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + + A+ Q + LL+Q+ +G+GNI E Sbjct: 181 QMSWSSSPVVTPACDILSEKFHRGQALEALGQAQ----PVCYTLLDQRYFSGLGNIIKNE 236 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+RA + P+ +L L+ + + + G Sbjct: 237 VLYRAGIHPLSLGSALSAPRR------EALVDHVVEFSTAWLQ-------------GKFQ 277 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 278 GRPQHTQVYQKEQCP----AGHQVMKEAFGPPGGFQRVTWWCPQCQ 319 >gi|301779515|ref|XP_002925180.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 1-like [Ailuropoda melanoleuca] Length = 464 Score = 49.2 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 99/306 (32%), Gaps = 44/306 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + R + + + R P SA I S R K Sbjct: 71 MPEGPELHLASRFVNEACRGLVFGGCVEKSPVSRNPEVPFESSAY-----CISSSARGKE 125 Query: 60 LLIE---------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L + G L+++ GMSGSF + P H H+ Sbjct: 126 LRLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDA-----LPAHAHLR--FYTAPPGP 178 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + + D RRFG DL + + + + A Sbjct: 179 RLALCFVDIRRFGRWDLGGEWQPXXXXXXGPCVLLEYERFRENVLRNLADKVFDQPICEA 238 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDA 228 LL+Q+ GIGN E L+R ++ P K R +++ P L + K+ Sbjct: 239 LLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLEALQQRRPSPELTLSQKIRAKLRNPD 298 Query: 229 IDAGGSSLRDYVHIDGSIGY-----------FQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + S+ V G GY F+ YG G L + RR Sbjct: 299 LLELCHSVPKEVVQLGGKGYGLESGEEDFAAFRAWLRCYGMPGMSSLRD-----RR---- 349 Query: 278 GRSTFY 283 GR+ ++ Sbjct: 350 GRTIWF 355 >gi|166157945|ref|NP_001107382.1| nei endonuclease VIII-like 2 [Xenopus (Silurana) tropicalis] gi|163915446|gb|AAI57270.1| LOC100135209 protein [Xenopus (Silurana) tropicalis] Length = 313 Score = 49.2 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 84/338 (24%), Gaps = 87/338 (25%) Query: 1 MPELPEVEIIRR--NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P +RR +L+ V + K + +GK+ K Sbjct: 1 MPEGP---TVRRFCSLVSPFVGQNVVKVGGSTKKI-------ALQDLQGKQFHYCQVHGK 50 Query: 59 YLLIEL-------------------------------------------EGNLSIIVHLG 75 L +E + +H+ Sbjct: 51 NLYLEFTTKAVGNILSGTEDAKEHIDQAGGSQKDYSIIQPTSEEHSESLQDADYSEIHMS 110 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 F + + + T + + + F + Sbjct: 111 RWLRFHFGLYGSVRSNEFARAKQANKRGDWRDPTPRLILNFESGGFLVFYNCR----MAW 166 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + + + + + L++QK +G+GNI E L+ ++ Sbjct: 167 CSSPASKPNCDVLSPEFDTEQAVRALSASQPVCFTLMDQKCFSGVGNIIKNEILFLEQVH 226 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P+ P + L+ L+ D + + + + Sbjct: 227 PLCLGS------LLPIEKLHSLVSHTLHFTSDWLSSKMKKE-------------ALHYHI 267 Query: 256 YGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Y K E C G + + R T++C CQ Sbjct: 268 YMK--EYCDK--GHKVIKEKLGPPYGIKRLTYFCPVCQ 301 >gi|301776577|ref|XP_002923709.1| PREDICTED: endonuclease VIII-like 2-like [Ailuropoda melanoleuca] Length = 376 Score = 48.8 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 89/352 (25%), Gaps = 96/352 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V + + V D +H K L RFD Sbjct: 1 MPEGPSVRKFHHLVSPFVGQEVVKTGGSSKKLNPASFQSLWLQDTQVHGKKLFLRFDPDE 60 Query: 40 HF---------SAATRGKK-------------------------IIDVSRRAKY----LL 61 F + +G++ + V+ R + L Sbjct: 61 EFGSLGNISLPESLEKGERKEEASDQKQASGPSSQKISHSSSQSLELVAPRGDHGLERLC 120 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + G F + K + + + Sbjct: 121 GDTPAEGAERWLQVSFGLFGSIWVNEFSRAKKANK-----RGDWRDPIPRLVLYFGGGGF 175 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 F + + + + A+ Q + LL+Q+ +G+G Sbjct: 176 LAFYNCQMSWSSSPVVRPTSDILSEKFDRGQALEALGQEQ----PVCYTLLDQRYFSGLG 231 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NI EAL+RA + P+ L L L+ + D + Sbjct: 232 NIIKNEALYRAGIHPLSLGSLLSP------QHLEALVDHAVEFSADWLQ----------- 274 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G Q +Y K P G + + R T++C CQ Sbjct: 275 --GKFQGKQQHTQIYQKEQCP----GGHRVMKEAFGPPGGFQRLTWWCPQCQ 320 >gi|281347692|gb|EFB23276.1| hypothetical protein PANDA_012894 [Ailuropoda melanoleuca] Length = 323 Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 89/352 (25%), Gaps = 96/352 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V + + V D +H K L RFD Sbjct: 1 MPEGPSVRKFHHLVSPFVGQEVVKTGGSSKKLNPASFQSLWLQDTQVHGKKLFLRFDPDE 60 Query: 40 HF---------SAATRGKK-------------------------IIDVSRRAKY----LL 61 F + +G++ + V+ R + L Sbjct: 61 EFGSLGNISLPESLEKGERKEEASDQKQASGPSSQKISHSSSQSLELVAPRGDHGLERLC 120 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + G F + K + + + Sbjct: 121 GDTPAEGAERWLQVSFGLFGSIWVNEFSRAKKANK-----RGDWRDPIPRLVLYFGGGGF 175 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 F + + + + A+ Q + LL+Q+ +G+G Sbjct: 176 LAFYNCQMSWSSSPVVRPTSDILSEKFDRGQALEALGQEQ----PVCYTLLDQRYFSGLG 231 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NI EAL+RA + P+ L L L+ + D + Sbjct: 232 NIIKNEALYRAGIHPLSLGSLLSP------QHLEALVDHAVEFSADWLQ----------- 274 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G Q +Y K P G + + R T++C CQ Sbjct: 275 --GKFQGKQQHTQIYQKEQCP----GGHRVMKEAFGPPGGFQRLTWWCPQCQ 320 >gi|73993762|ref|XP_543204.2| PREDICTED: similar to nei-like 2 [Canis familiaris] Length = 504 Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%) Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + LL+Q+ +G+GNI EAL+RA + P+ L L L+ + + Sbjct: 386 PVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSLLSPR------HLEALVDHVVEFS 439 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRS 280 D + G Q +Y K P G + + R Sbjct: 440 ADWLQ-------------GKFQGKQQHTQIYQKEQCPF----GHPVMKDAFGPPGGFQRL 482 Query: 281 TFYCTYCQ 288 T++C CQ Sbjct: 483 TWWCPQCQ 490 >gi|74001005|ref|XP_854395.1| PREDICTED: similar to Endonuclease VIII-like 1 (Nei-like 1) (DNA glycosylase/AP lyase Neil1) (DNA-(apurinic or apyrimidinic site) lyase Neil1) (NEH1) (FPG1) [Canis familiaris] Length = 389 Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 86/276 (31%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + R + + + R P SA+ RGK++ Sbjct: 1 MPEGPELHLASRFVNAACAGLVFGGAVETSRCSRGPAVPFESSAYRISASARGKELRLAL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R + L+++ GM+GSF + P H H+ + + Sbjct: 61 RPLP-GALPAREPLALVFRFGMTGSFRLAPRDA-----LPAHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG L + P + +N + + ALL+Q Sbjct: 113 CFVDARRFGRWHLGGDWQPGRGPCVLLEYERFRENVLRNLAHKAFEQ----PICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKT---------RSLIQNNGTPKDILYKL----IQEI 221 + GIGN E L R + P K R + I KL + E+ Sbjct: 169 RFFNGIGNYLRAEILHRLGIPPFEKARTVLEALQQRRPSPEQTLSQKIRAKLQSPDLLEL 228 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 + + G + F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGPESGEEDFAAFRAWLRCYG 264 >gi|21450800|ref|NP_659480.1| endonuclease 8-like 2 isoform a [Homo sapiens] gi|209364526|ref|NP_001129218.1| endonuclease 8-like 2 isoform a [Homo sapiens] gi|56404653|sp|Q969S2|NEIL2_HUMAN RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|15530311|gb|AAH13952.1| NEIL2 protein [Homo sapiens] gi|15530332|gb|AAH13964.1| NEIL2 protein [Homo sapiens] gi|16551546|dbj|BAB71120.1| unnamed protein product [Homo sapiens] gi|31415699|gb|AAP45052.1| nei like 2 (E. coli) [Homo sapiens] gi|119586027|gb|EAW65623.1| nei like 2 (E. coli), isoform CRA_a [Homo sapiens] gi|119586029|gb|EAW65625.1| nei like 2 (E. coli), isoform CRA_a [Homo sapiens] gi|190690293|gb|ACE86921.1| nei like 2 (E. coli) protein [synthetic construct] gi|190691667|gb|ACE87608.1| nei like 2 (E. coli) protein [synthetic construct] gi|208966842|dbj|BAG73435.1| nei like 2 [synthetic construct] Length = 332 Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 38/254 (14%) Query: 46 RGKKIIDVSRRAKYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI- 101 G+K +D S R+ L+ + L G +G ++ + + Sbjct: 93 SGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKA 152 Query: 102 --SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 + + + + F + + + Sbjct: 153 NKRGDWRDPSPRLVLHFGGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALE 208 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ Sbjct: 209 ALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVD 262 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-- 277 + + + G VY K P G + + Sbjct: 263 HVVEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPE 305 Query: 278 ---GRSTFYCTYCQ 288 R T++C CQ Sbjct: 306 DGLQRLTWWCPQCQ 319 >gi|169840293|ref|ZP_02873481.1| hypothetical protein cdivTM_24685 [candidate division TM7 single-cell isolate TM7a] Length = 66 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 2 PELPEVEIIRRNLMMVMKNMT 22 PELPEVE IRR L ++ Sbjct: 23 PELPEVETIRRGLQDIITGKK 43 >gi|258567828|ref|XP_002584658.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237906104|gb|EEP80505.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 239 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF 35 MPEL EV I + + V+ + +L F Sbjct: 1 MPELAEVARIVHYIRKELVGKRVSKVIAKHDDLVF 35 Score = 41.9 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 7/96 (7%) Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 ++ +I + L + + L AI ++ D + G F + ++ Sbjct: 21 KRVSKVIAKHDDLVFGKQHLSEAQVQELHSAIHYVCATSVDLL---GDSSRFPTDWLMHH 77 Query: 258 KTG----EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G ++ I GR++ QK Sbjct: 78 RWNKRSKQASKMLNGDLVTFITVGGRTSAIVPSVQK 113 >gi|197100087|ref|NP_001125714.1| endonuclease 8-like 2 [Pongo abelii] gi|75041891|sp|Q5RAJ7|NEIL2_PONAB RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei-like protein 2 gi|55728950|emb|CAH91213.1| hypothetical protein [Pongo abelii] Length = 332 Score = 47.7 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 28/128 (21%) Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + + Sbjct: 215 PVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFS 268 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRS 280 + G VY + P G + + R Sbjct: 269 TAWLQ-------------GKFQGRPQRTQVYQREQCP----AGHQVMKEAFGPQDGLQRL 311 Query: 281 TFYCTYCQ 288 T++C CQ Sbjct: 312 TWWCPQCQ 319 >gi|114623542|ref|XP_519606.2| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114623544|ref|XP_001141968.1| PREDICTED: endonuclease 8-like 2 isoform 2 [Pan troglodytes] Length = 350 Score = 47.3 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 89/346 (25%), Gaps = 85/346 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V R + + V D +H K L RFD Sbjct: 1 MPEGPLVRKFHRLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQDTQVHGKKLFLRFDLDE 60 Query: 40 HF-----------------------SAAT---RGKKIIDVSRRAKYLLI---ELEGNLSI 70 G+K +D S ++ L+ + L Sbjct: 61 EMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSSQSAELVPQGEDDSEYLER 120 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI---SLTNNTNTKKYRVIYNDPRRFGFMDL 127 G +G ++ I + + + + ++ F + Sbjct: 121 DAPAGDAGRWLRVSFGLFGSIWVNDFSRAKKANKRGDWRDPSPRLVLHFSGGGFLAFYNC 180 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + + + + LL+Q+ +G+GNI E Sbjct: 181 ----QLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNE 236 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+RA + P+ L + L+ + + + G Sbjct: 237 ALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------GKFQ 277 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 278 GRPQHTQVYQKEQCP----AGHQVMKEAFGPEDGLQRLTWWCPQCQ 319 >gi|22004057|dbj|BAC06478.1| hypothetical protein [Homo sapiens] Length = 332 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + + F + + + Sbjct: 155 RGDWRDPSPRLVLHFGGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALEAL 210 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + Sbjct: 211 GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHV 264 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + G VY K P G + + Sbjct: 265 VEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPEDG 307 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 308 LQRLTWWCPQCQ 319 >gi|209364528|ref|NP_001129219.1| endonuclease 8-like 2 isoform b [Homo sapiens] gi|21757126|dbj|BAC05030.1| unnamed protein product [Homo sapiens] gi|119586028|gb|EAW65624.1| nei like 2 (E. coli), isoform CRA_b [Homo sapiens] Length = 271 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 38/254 (14%) Query: 46 RGKKIIDVSRRAKYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI- 101 G+K +D S R+ L+ + L G +G ++ + + Sbjct: 32 SGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKA 91 Query: 102 --SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 + + + + F + + + Sbjct: 92 NKRGDWRDPSPRLVLHFGGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALE 147 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ Sbjct: 148 ALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVD 201 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-- 277 + + + G VY K P G + + Sbjct: 202 HVVEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPE 244 Query: 278 ---GRSTFYCTYCQ 288 R T++C CQ Sbjct: 245 DGLQRLTWWCPQCQ 258 >gi|114623546|ref|XP_001141824.1| PREDICTED: endonuclease 8-like 2 isoform 1 [Pan troglodytes] Length = 289 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + ++ F + + + Sbjct: 94 RGDWRDPSPRLVLHFSGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALEAL 149 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + Sbjct: 150 GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHV 203 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + G VY K P G + + Sbjct: 204 VEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPEDG 246 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 247 LQRLTWWCPQCQ 258 >gi|149698301|ref|XP_001495938.1| PREDICTED: similar to NEIL2 protein [Equus caballus] Length = 333 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + F + + P+ + F+ Sbjct: 155 RGDWRDPVPRLVLHFGGGGFLAF---YNCQMSWSSSPVVRPTSDILSEKFHRGQALEALG 211 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + LL+Q+ +G+GNI EAL+RA + P+ L L L+ + Sbjct: 212 QEQ-PVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSLLSPPR------LEVLLDHV 264 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + D + G Q +Y K P G + + Sbjct: 265 VEFSADWLQ-------------GKFQGKQQHTQIYQKEQCP----AGHQVMKEAFGPPGG 307 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 308 FQRLTWWCPQCQ 319 >gi|149236155|ref|XP_001523955.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL YB-4239] gi|146452331|gb|EDK46587.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL YB-4239] Length = 508 Score = 47.3 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 8/125 (6%) Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K+ LL+Q AG+GN E L+ AKL P L +LY L + + V Sbjct: 258 KTIKSMLLDQARFAGVGNWVADEVLFHAKLHPE---EVLPLKIKLDSPVLYTLYKSLIHV 314 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++ GS+ R + ++ + K P + G ++ I GR++ Y Sbjct: 315 CETSVALEGSARRFPENW-----LMRHRWGKGRKRDGPHQTAEGILLDHITVGGRTSCYA 369 Query: 285 TYCQK 289 QK Sbjct: 370 PSVQK 374 >gi|157822593|ref|NP_001100740.1| endonuclease VIII-like 2 [Rattus norvegicus] gi|149030262|gb|EDL85318.1| nei like 2 (E. coli) (predicted) [Rattus norvegicus] Length = 330 Score = 46.9 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 69/227 (30%), Gaps = 40/227 (17%) Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 + V G+ GS + S AK + + ++ F + Sbjct: 125 QRWLEVRFGLFGSIWVNDFSRAKKAN--------KRGDWIDPVPRLVLHFSGGGFLAFYN 176 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 PP + + + + LL+Q+ +G+GNI Sbjct: 177 C----QMSWSPPPVIEPTCDILSEKFHRGQALEALSQAQPVCYTLLDQRYFSGLGNIIKN 232 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 EAL+RA++ P+ L L+ + + D LRD Sbjct: 233 EALYRARIHPLSLGS------FLSPSSLEALVDHVVEFSTDW-------LRDKFQGK--- 276 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K E C S G + + R T++C CQ Sbjct: 277 ---ERHTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 316 >gi|297296933|ref|XP_002804926.1| PREDICTED: endonuclease VIII-like 1-like [Macaca mulatta] Length = 346 Score = 46.9 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 97/277 (35%), Gaps = 33/277 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLP-GAHPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPQLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDVRRFGHWDLGGKWQPGRGPCVLQEYEQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK--------------LIQE 220 + GIGN E L+R K+ P K RS+++ + L L++ Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSLKLTLSQKIKAKLQNPDLLEL 228 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 V + + GG + F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGS-ESGEEDFAAFRAWLRCYG 264 >gi|260941075|ref|XP_002614704.1| hypothetical protein CLUG_05482 [Clavispora lusitaniae ATCC 42720] gi|238851890|gb|EEQ41354.1| hypothetical protein CLUG_05482 [Clavispora lusitaniae ATCC 42720] Length = 346 Score = 46.9 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 + +K LL+Q AG+GN E L+ A++ P I + P+ Sbjct: 199 FPDFAKLVLSRRKPIKALLLDQAFFAGVGNWVSDEILYHAQIHPSENLAEHISDPEDPR- 257 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-- 270 L +L + V+ ++ ++G++ F + + + G+ Sbjct: 258 -LARLYYSLIYVMEVSV-----------AVEGNVREFPENWLMLHRWGKRRKEKAKTKMG 305 Query: 271 --IRRIVQAGRSTFYCTYCQK 289 + GR++ + QK Sbjct: 306 YSVAFETVGGRTSCFVPELQK 326 >gi|301632943|ref|XP_002945539.1| PREDICTED: endonuclease VIII-like 2-like [Xenopus (Silurana) tropicalis] Length = 287 Score = 46.9 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 83/306 (27%), Gaps = 49/306 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P V + + V + K + +GK+ K L Sbjct: 1 MPEGPTVRRFCSLVSPFVS-QNVVKVGGSTKKI-------ALQDLQGKQFRYCQVHGKNL 52 Query: 61 LIELEGNLSIIV---------HLGMSGS----FIIEHTSCAKPIKNPQHNHVTISLTNNT 107 +E V H+ +G + I + + ++P+ + + + Sbjct: 53 YLEFTTKAVENVLSGTEDAKEHIDQAGDSQKDYSIIQPTSEEHSESPKAANYSEIHLSRW 112 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + + P + Y F Sbjct: 113 LRFHFGLYGSVRSNEFARAKQANKRGDWRDPTPRKTATFTSAAQQDTYFVCLFVFVLEIN 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K+ ++ + + GNI E L+ ++ P+ P + L+ L+ D Sbjct: 173 KSPIIINMVKSNSGNIIKNEILFLEQVHPLCLGS------LLPIEKLHSLVSHTLHFTSD 226 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTF 282 + + + +Y K E C G + + R T+ Sbjct: 227 WLSSKMKKE-------------ALHYHIYMK--EYCDK--GHKVIKEKLGPPYGIKRLTY 269 Query: 283 YCTYCQ 288 +C CQ Sbjct: 270 FCPVCQ 275 >gi|118130803|ref|NP_963904.2| endonuclease 8-like 2 [Mus musculus] gi|148704121|gb|EDL36068.1| nei like 2 (E. coli) [Mus musculus] Length = 329 Score = 46.5 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 88/342 (25%), Gaps = 81/342 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKNL--RFDFPH 39 MPE P V + + V D +H K L RFD Sbjct: 1 MPEGPSVRKFHHLVSPFVGQKVVKTGGSSKKLHPAAFQSLWLQDAQVHGKKLFLRFDPDE 60 Query: 40 HFS------AATRGKKIIDVSRRAKYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 +G + R L E S S S + Sbjct: 61 EMEPLNSSPQPIQGMWQKEAVDRELALGPSAQEPSAGPSGSGEPVPSRSAETYNLGKIPS 120 Query: 91 IKNPQHNHVTISL-------------------TNNTNTKKYRVIYNDPRRFGFMDLVETS 131 + V L + + ++ F + Sbjct: 121 ADAQRWLEVRFGLFGSIWVNDFSRAKKANKKGDWRDPVPRLVLHFSGGGFLVFYNC---- 176 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 PP + + + + LL+Q+ +G+GNI EAL+R Sbjct: 177 QMSWSPPPVIEPTCDILSEKFHRGQALEALSQAQPVCYTLLDQRYFSGLGNIIKNEALYR 236 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A++ P L + L+ + + D LRD + Sbjct: 237 ARIHP------LSLGSCLSSSSREALVDHVVEFSKDW-------LRDKFQGK------ER 277 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 +Y K E C S G + + R T++C CQ Sbjct: 278 HTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 315 >gi|114623540|ref|XP_001142056.1| PREDICTED: endonuclease 8-like 2 isoform 3 [Pan troglodytes] Length = 384 Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + ++ F + + + Sbjct: 189 RGDWRDPSPRLVLHFSGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALEAL 244 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + Sbjct: 245 GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHV 298 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + G VY K P G + + Sbjct: 299 VEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPEDG 341 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 342 LQRLTWWCPQCQ 353 >gi|205360991|ref|NP_078884.2| endonuclease 8-like 1 [Homo sapiens] gi|56404654|sp|Q96FI4|NEIL1_HUMAN RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=FPG1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|29501766|gb|AAO74826.1| nei endonuclease VIII-like 1 (E. coli) [Homo sapiens] gi|119619661|gb|EAW99255.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] gi|119619666|gb|EAW99260.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] Length = 390 Score = 46.5 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|224000619|ref|XP_002289982.1| glycosylase [Thalassiosira pseudonana CCMP1335] gi|220975190|gb|EED93519.1| glycosylase [Thalassiosira pseudonana CCMP1335] Length = 447 Score = 46.1 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 89/269 (33%), Gaps = 49/269 (18%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLI----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 HH + + + + K L + E + + +H GM+GS K + Sbjct: 45 HHVAQELSEQTLTEAFTVGKELFLVFSDTNEKDNVLRLHFGMNGSLNARRAYTNKSNQKK 104 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 T R+ + + ++ N+ +A Sbjct: 105 ASGAAPWK---QNKTPCLRLYFTEVNYKTVSADAARDKLFR--LNSRDVCSALFNAQDAF 159 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 Q + ++ +ALLNQ I G+GNI E+L R+ + P + +L L Sbjct: 160 TSLRQAGQHM-SISDALLNQDIFPGVGNIIKIESLHRSLVDPRKIVNTLSDQE------L 212 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 ++++ +K +D ++ G G VY +T C + G ++ Sbjct: 213 RRIVRHTRKFSMDWLNT------------GRAGTK----LVYNQT--VCGTCGGMTVKMQ 254 Query: 275 VQAG---------------RSTFYCTYCQ 288 G R TF+CT CQ Sbjct: 255 KIGGGGDRNTSGNGQAFMSRVTFWCTACQ 283 >gi|71043710|ref|NP_001020925.1| endonuclease VIII-like 1 [Rattus norvegicus] gi|68533825|gb|AAH99125.1| Nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] gi|149041762|gb|EDL95603.1| nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] Length = 387 Score = 46.1 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 79/212 (37%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAAT-RGKKIIDVS 54 MPE PE+ + + + K + + F+ + +A RGK++ Sbjct: 1 MPEGPELHLASHFVNEICKGLVFGGCVEKSSVSRNPEVPFESSAYHISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + LS++ GMSGSF + P+H H+ + + Sbjct: 61 SPLP-GSHPPQKPLSLVFRFGMSGSFQLVPAEA-----LPRHAHLR--FYTAPPAPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG D + P + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGHWDPGGEWQPGRGPCVLLEYERFRENVLRNLSDKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R K+ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 200 >gi|12850615|dbj|BAB28790.1| unnamed protein product [Mus musculus] Length = 354 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 101/295 (34%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAAT-RGKKIIDVS 54 MPE PE+ + + K + + F+ + +A RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYHISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + LS++ GMSGSF + P+H H+ + + Sbjct: 61 SPLPGSQP-PQKPLSLVFRFGMSGSFQLVPAEA-----LPRHAHLR--FYTAPPAPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG D + P + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGHWDPGGEWQPGRGPCVLLEYERFRENVLRNLSDKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K R++++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQCRPSPELTLSQKIKAKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGYFQNA----FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + V G GY F+ + + C G R GR+ ++ Sbjct: 229 CHLVPKEVVQLGGKGYGPERGEEDFAAF-RAWLRCYGVPGMSSLRDRH-GRTIWF 281 >gi|119619663|gb|EAW99257.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_c [Homo sapiens] Length = 424 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|126303985|ref|XP_001381635.1| PREDICTED: similar to NEIL2 protein [Monodelphis domestica] Length = 417 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 81/297 (27%), Gaps = 50/297 (16%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKI----IDVSRRAKY 59 LPE L+ + + D ++ G+++ + + Sbjct: 64 LPE-----SFLLPKHLQKK-----VRLPKEKSDHKLETTSRLDGQEVPGSSLAIKALELG 113 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + SG ++ H + + + + + + Sbjct: 114 EEEKETVMPWWLNTSQNSGLWLCFHFGLFGSVRASELSRATKANKRGDWKDPIPRLVLHF 173 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + + L P + E D L + LL+Q+ Sbjct: 174 AKGFLAFYNCRIYWCLGPTVKPTSDILSEEFDRRQALEALKQASPVSYT-----LLDQRY 228 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 AG+GNI E L+ A++ P+ L N L L+ + + + Sbjct: 229 FAGLGNIIKNEVLYLARIHPLSLGSCLTPLN------LESLLDHVVSFSVGWLQ------ 276 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G + + R T++C +CQ Sbjct: 277 -------KKLEGKPLHHLIYQKEQCP----AGHQVMKDSFGPPGSFQRLTWWCPHCQ 322 >gi|50745254|ref|XP_420042.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 328 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 32/220 (14%) Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 G F + + + + + + + F + Sbjct: 121 PGSWLRFHFGLFGSIRANEFSRASRANKRGDWKDPAPRLVLYFESGGFLVFYNCRMHWCS 180 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + + A+ + + LL+Q+ +G+GNI E L+ K Sbjct: 181 SLVADPTSDILSAEFHRGQALDALR----TSRPICYTLLDQRYFSGLGNIIKNEVLYLVK 236 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P+ + L Q++ L L+ AI + L+ + G Sbjct: 237 IHPLTQGSLLAQSD------LEHLLD-------CAIQFTSNWLQSKLQGKGL------HL 277 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 +Y K P G ++ + R T++C CQ Sbjct: 278 QIYQKEQCPL----GHVVMKGALGPPGGWKRLTWWCPQCQ 313 >gi|27696577|gb|AAH43297.1| Neil1 protein [Mus musculus] Length = 253 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAAT-RGKKIIDVS 54 MPE PE+ + + K + + F+ + +A RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYHISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + LS++ GMSGSF + P+H H+ + + Sbjct: 61 SPLPGSQP-PQKPLSLVFRFGMSGSFQLVPAEA-----LPRHAHLR--FYTAPPAPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG D + P + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGHWDPGGEWQPGRGPCVLLEYERFRENVLRNLSDKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R K+ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 200 >gi|327273853|ref|XP_003221694.1| PREDICTED: endonuclease 8-like 3-like [Anolis carolinensis] Length = 426 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 5/41 (12%) Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + VY + P CG I R T++C CQK Sbjct: 79 KHYKVYKR---PNCGQCGAKITVCRLGENNRMTYFCPQCQK 116 >gi|148693942|gb|EDL25889.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_b [Mus musculus] Length = 266 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAAT-RGKKIIDVS 54 MPE PE+ + + K + + F+ + +A RGK++ Sbjct: 14 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYHISALARGKELRLTL 73 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + LS++ GMSGSF + P+H H+ + + Sbjct: 74 SPLPGSQP-PQKPLSLVFRFGMSGSFQLVPAEA-----LPRHAHLR--FYTAPPAPRLAL 125 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG D + P + +N + + + ALL+Q Sbjct: 126 CFVDIRRFGHWDPGGEWQPGRGPCVLLEYERFRENVLRNLSDKAF----DRPICEALLDQ 181 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R K+ P K R++++ Sbjct: 182 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 213 >gi|332862710|ref|XP_003317963.1| PREDICTED: endonuclease 8-like 2 [Pan troglodytes] Length = 234 Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 32/193 (16%) Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 SL + + ++ F + + + Sbjct: 38 QSLWLQDTQVRLVLHFSGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALEA 93 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ Sbjct: 94 LGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDH 147 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--- 277 + + + G VY K P G + + Sbjct: 148 VVEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPED 190 Query: 278 --GRSTFYCTYCQ 288 R T++C CQ Sbjct: 191 GLQRLTWWCPQCQ 203 >gi|332244650|ref|XP_003271487.1| PREDICTED: endonuclease 8-like 2 isoform 1 [Nomascus leucogenys] Length = 332 Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + + F+ + + P+ T + F+ Sbjct: 155 RGDWRDPSPRLVLHFGGGG---FVAFYNCQMSWSSSPVVTPTCDILSEKFHRGQALEALG 211 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + Sbjct: 212 QAQ-PVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHV 264 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + G VY K P G + + Sbjct: 265 VEFSTAWLQ-------------GKFEGKPQHTQVYQKEQCP----AGHQVMKEAFGPQNG 307 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 308 LQRLTWWCPQCQ 319 >gi|115726436|ref|XP_001178097.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115890800|ref|XP_001186438.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 480 Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 89/278 (32%), Gaps = 48/278 (17%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 ++ D+ ++ K L K++ + E ++ I H Sbjct: 22 KKKWSGASLEDVRVYGKRLFLH--------LVHKRVSTAESES---EDSDEESVWIRCHF 70 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 M GS + +C N + R+I+ + + + + Sbjct: 71 LMWGSVRVNEFNCKSSKTNKF--------------PEPRLIFYFSKEEFLVFYGGSFQEM 116 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 +PP + + FN + + LL+QK AG+GNI E L+ Sbjct: 117 NHPPEDESRRDILSDGFN-RSRAEDCILGDLPISFILLDQKKFAGLGNIIKDEVLFSTGT 175 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P++ L + T + K++ ++ L ++ SS F + Sbjct: 176 HPMQLGCQLSRAKATVI--VEKVVTFTKRWLAWKMEEKPSS------------KFGDWTE 221 Query: 255 VYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 +Y K C G + + R T++C CQ Sbjct: 222 IYKKA--MCPK--GHETTKSMFGPAGMERITYWCPKCQ 255 >gi|14790078|gb|AAH10876.1| NEIL1 protein [Homo sapiens] gi|22004053|dbj|BAC06476.1| endonuclease VIII [Homo sapiens] gi|123981054|gb|ABM82356.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] gi|123995859|gb|ABM85531.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] Length = 390 Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYG 264 >gi|326916761|ref|XP_003204673.1| PREDICTED: endonuclease 8-like 2-like [Meleagris gallopavo] Length = 324 Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 63/220 (28%), Gaps = 32/220 (14%) Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 G F + + + + + + + F + Sbjct: 117 PGSWLRFHFGLFGSIRANEFSRASRANKRGDWKDPIPRLVLYFESGGFLVFYNCRMHW-- 174 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 ++ + + + LL+Q+ +G+GNI E L+ K Sbjct: 175 --CSSPVADPTSDILSAEFHRGRALDALRTSHPICYTLLDQRYFSGLGNIIKNEVLYLVK 232 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P+ + L Q++ L L+ AI L+ + G Sbjct: 233 IHPLTQGSLLAQSD------LEHLLD-------CAIQFTSDWLQSKLQGKGL------HL 273 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 +Y K P G ++ + R T++C CQ Sbjct: 274 QIYQKEQCPL----GHVVMKGALGPPGGWKRLTWWCPQCQ 309 >gi|114658202|ref|XP_001143488.1| PREDICTED: nei endonuclease VIII-like 1 isoform 2 [Pan troglodytes] gi|114658204|ref|XP_523224.2| PREDICTED: nei endonuclease VIII-like 1 isoform 11 [Pan troglodytes] gi|114658206|ref|XP_001143639.1| PREDICTED: nei endonuclease VIII-like 1 isoform 3 [Pan troglodytes] gi|114658208|ref|XP_001143703.1| PREDICTED: nei endonuclease VIII-like 1 isoform 4 [Pan troglodytes] gi|114658210|ref|XP_001143868.1| PREDICTED: nei endonuclease VIII-like 1 isoform 5 [Pan troglodytes] gi|114658212|ref|XP_001144008.1| PREDICTED: endonuclease 8-like 1 isoform 7 [Pan troglodytes] gi|114658214|ref|XP_001144235.1| PREDICTED: nei endonuclease VIII-like 1 isoform 10 [Pan troglodytes] Length = 390 Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ ++ + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGRRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|119619665|gb|EAW99259.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_e [Homo sapiens] Length = 433 Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 44 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 103 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 104 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 155 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 156 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 211 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 212 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 271 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 272 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 307 >gi|255026403|ref|ZP_05298389.1| hypothetical protein LmonocytFSL_08810 [Listeria monocytogenes FSL J2-003] Length = 28 Score = 45.7 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD 25 MPE+PEVE +R L ++ + Sbjct: 1 MPEMPEVENVRATLQELVPGKKIRS 25 >gi|22094129|ref|NP_082623.1| endonuclease 8-like 1 [Mus musculus] gi|56404617|sp|Q8K4Q6|NEIL1_MOUSE RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|22004055|dbj|BAC06477.1| endonuclease VIII [Mus musculus] gi|148693941|gb|EDL25888.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Mus musculus] Length = 389 Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 101/295 (34%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-----TDICLHRKNLRFDFPHHFSAAT-RGKKIIDVS 54 MPE PE+ + + K + + F+ + +A RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYHISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + LS++ GMSGSF + P+H H+ + + Sbjct: 61 SPLPGSQP-PQKPLSLVFRFGMSGSFQLVPAEA-----LPRHAHLR--FYTAPPAPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG D + P + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGHWDPGGEWQPGRGPCVLLEYERFRENVLRNLSDKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K R++++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQCRPSPELTLSQKIKAKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGYFQNA----FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + V G GY F+ + + C G R GR+ ++ Sbjct: 229 CHLVPKEVVQLGGKGYGPERGEEDFAAF-RAWLRCYGVPGMSSLRDRH-GRTIWF 281 >gi|114658216|ref|XP_001144075.1| PREDICTED: nei endonuclease VIII-like 1 isoform 8 [Pan troglodytes] gi|114658218|ref|XP_001144152.1| PREDICTED: nei endonuclease VIII-like 1 isoform 9 [Pan troglodytes] Length = 424 Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ ++ + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGRRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|209364530|ref|NP_001129220.1| endonuclease 8-like 2 isoform c [Homo sapiens] gi|194376764|dbj|BAG57528.1| unnamed protein product [Homo sapiens] Length = 216 Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 32/193 (16%) Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 SL + + + F + + + Sbjct: 38 QSLWLQDTQVRLVLHFGGGGFLAFYNC----QLSWSSSPVVTPTCDILSEKFHRGQALEA 93 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ Sbjct: 94 LGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDH 147 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--- 277 + + + G VY K P G + + Sbjct: 148 VVEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCP----AGHQVMKEAFGPED 190 Query: 278 --GRSTFYCTYCQ 288 R T++C CQ Sbjct: 191 GLQRLTWWCPQCQ 203 >gi|10438774|dbj|BAB15337.1| unnamed protein product [Homo sapiens] Length = 390 Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + ++ + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYG 264 >gi|51247632|pdb|1TDH|A Chain A, Crystal Structure Of Human Endonuclease Viii-Like 1 (Neil1) Length = 364 Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + ++ + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRESVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYG 264 >gi|119619664|gb|EAW99258.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_d [Homo sapiens] Length = 476 Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 87 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 146 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + L+++ GMSGSF + + P+H H+ + + Sbjct: 147 SPLPGAQPQ-QEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGPRLAL 198 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 199 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 254 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 255 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPDLLEL 314 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 315 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 350 >gi|297697156|ref|XP_002825736.1| PREDICTED: endonuclease VIII-like 1-like isoform 3 [Pongo abelii] Length = 402 Score = 45.0 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 98/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 13 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 72 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + Sbjct: 73 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGLRLAL 124 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 125 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 180 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 181 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPDLLEL 240 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 241 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 276 >gi|124249442|ref|NP_001074345.1| endonuclease VIII-like 1 [Gallus gallus] gi|53130742|emb|CAG31700.1| hypothetical protein RCJMB04_9m20 [Gallus gallus] Length = 363 Score = 45.0 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 30/206 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + G R + Sbjct: 1 MPECPELHLAGRYINETCGGLVFE----------------------GGVQRSAVGRGPEV 38 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G +E + ++ P+H H+ + + + DPR Sbjct: 39 PFSSDAYKVTAASRGKELRLTLEPP-AVRGLQPPRHAHLRFF---TRESPPRALCFVDPR 94 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E + P + P +N + + + + ALLNQK GI Sbjct: 95 RFGTWRLGEAWQPDRGPCVLLEYPAFRENVLSNLEDAAF----DKPVCEALLNQKYFNGI 150 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN 206 GN E L+RAK+ P K R++++ Sbjct: 151 GNYLRAEILYRAKIPPFEKARTVLEA 176 >gi|296221615|ref|XP_002756814.1| PREDICTED: endonuclease VIII-like 2-like [Callithrix jacchus] Length = 216 Score = 45.0 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 32/194 (16%) Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 SL + + + F + + + Sbjct: 37 VQSLWLQDAQMRLVLHFGGGGFLAFYNC----QMSWSSSPAVTPTCDILSEKFHRGQALE 92 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + LL+QK +G+GNI E L+RA + P+ L + L+ Sbjct: 93 ALGQAQPVCYTLLDQKHFSGLGNIIKNEVLYRAGIHPLSLGSVLSASQR------EALVD 146 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-- 277 + + + D G+ Q+ VY K P G + + Sbjct: 147 GVVEFSAAWLQ------------DKLQGHPQHT-QVYQKEWCP----AGHQLLKEAFGPP 189 Query: 278 ---GRSTFYCTYCQ 288 R T++C CQ Sbjct: 190 GGFQRLTWWCPQCQ 203 >gi|332265719|ref|XP_003281864.1| PREDICTED: endonuclease 8-like 1-like [Nomascus leucogenys] Length = 297 Score = 45.0 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPSGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|297697152|ref|XP_002825734.1| PREDICTED: endonuclease VIII-like 1-like isoform 1 [Pongo abelii] Length = 390 Score = 44.6 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 98/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGLRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPDLLEL 228 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 229 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 264 >gi|297463383|ref|XP_001789711.2| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|297488077|ref|XP_002696720.1| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|296475464|gb|DAA17579.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 401 Score = 44.6 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + R P SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYSISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L+++ GM+GSF + + P H H+ + + Sbjct: 61 SPLPGAQPHR-EPLALVFRFGMTGSFQLVPSDA-----LPPHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGEWQPGRGPCVLLEYEQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R ++ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILYRLRIPPFEKARTVLEA 200 >gi|281343397|gb|EFB18981.1| hypothetical protein PANDA_014616 [Ailuropoda melanoleuca] Length = 384 Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 101/306 (33%), Gaps = 54/306 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + R + + + R P SA I S R K Sbjct: 1 MPEGPELHLASRFVNEACRGLVFGGCVEKSPVSRNPEVPFESSAY-----CISSSARGKE 55 Query: 60 LLIE---------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L + G L+++ GMSGSF + P H H+ Sbjct: 56 LRLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDA-----LPAHAHLR--FYTAPPGP 108 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + + D RRFG DL PP P A + Q + Sbjct: 109 RLALCFVDIRRFGRWDL----GGEALPPQCQYSPRENVLRNLADKVFDQPICEA------ 158 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDA 228 LL+Q+ GIGN E L+R ++ P K R +++ P L + K+ Sbjct: 159 LLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLEALQQRRPSPELTLSQKIRAKLRNPD 218 Query: 229 IDAGGSSLRDYVHIDGSIGY-----------FQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + S+ V G GY F+ YG G L + RR Sbjct: 219 LLELCHSVPKEVVQLGGKGYGLESGEEDFAAFRAWLRCYGMPGMSSLRD-----RR---- 269 Query: 278 GRSTFY 283 GR+ ++ Sbjct: 270 GRTIWF 275 >gi|55727714|emb|CAH90608.1| hypothetical protein [Pongo abelii] Length = 240 Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGLRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVGIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R K+ P K RS+++ Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 200 >gi|332244652|ref|XP_003271488.1| PREDICTED: endonuclease 8-like 2 isoform 2 [Nomascus leucogenys] Length = 216 Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 28/128 (21%) Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + + Sbjct: 99 PVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFS 152 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRS 280 + G VY K P G + + R Sbjct: 153 TAWLQ-------------GKFEGKPQHTQVYQKEQCP----AGHQVMKEAFGPQNGLQRL 195 Query: 281 TFYCTYCQ 288 T++C CQ Sbjct: 196 TWWCPQCQ 203 >gi|327288078|ref|XP_003228755.1| PREDICTED: endonuclease 8-like 2-like [Anolis carolinensis] Length = 332 Score = 44.6 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 59/220 (26%), Gaps = 32/220 (14%) Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 F + + + N + + + F + Sbjct: 124 PRKWLRFQFGLYGSIRANEFARANKANKRGDWRDPVPRLILNFEGGGFLVFYNCR----I 179 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + + K + + LLNQ +G+GN EAL+ A+ Sbjct: 180 QPCSSPSNEPSTDILSPEFDRGKALEALCKPTPVCYTLLNQTYFSGLGNRIKNEALYLAR 239 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P+ P L L+ + ++ + + + Sbjct: 240 IHPLSLGSQ------LPSCDLESLLDSAVQFSLEWLQS-------------KLQKKSVQV 280 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 +Y + C + G +++ R T++C CQ Sbjct: 281 HIYMRD--KCPA--GHEVKKEALGPPDGLKRLTWWCPQCQ 316 >gi|61554363|gb|AAX46545.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 332 Score = 44.2 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + R P SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYSISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L+++ GM+GSF + + P H H+ + + Sbjct: 61 SPLPGAQPHR-EPLALVFRFGMTGSFQLVPSDA-----LPPHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGEWQPGRGPCVLLEYEQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R ++ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILYRLRIPPFEKARTVLEA 200 >gi|151557030|gb|AAI49866.1| NEIL1 protein [Bos taurus] Length = 221 Score = 44.2 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 78/212 (36%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + R P SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYSISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GM+GSF + + P H H+ + + Sbjct: 61 SPLPGAQPQR-EPLALVFRFGMTGSFQLVPSDA-----LPPHAHLR--FYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWDLGGEWQPGRGPCVLLEYEQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L+R ++ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILYRLRIPPFEKARTVLEA 200 >gi|297697154|ref|XP_002825735.1| PREDICTED: endonuclease VIII-like 1-like isoform 2 [Pongo abelii] Length = 476 Score = 43.8 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 98/276 (35%), Gaps = 31/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + + + R P SA+ RGK++ + Sbjct: 87 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYRISASARGKELRLIL 146 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GMSGSF + + P+H H+ + + Sbjct: 147 SPLPGAQP-PQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLR--FYTAPPGLRLAL 198 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG DL + P + + +N + + + ALL+Q Sbjct: 199 CFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNLADKAF----DRPICEALLDQ 254 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAG 232 + GIGN E L+R K+ P K RS+++ P L + K+ + Sbjct: 255 RFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPDLLEL 314 Query: 233 GSSLRDYVHIDGSIGY-----------FQNAFSVYG 257 S+ V G GY F+ YG Sbjct: 315 CHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYG 350 >gi|167946500|ref|ZP_02533574.1| hypothetical protein Epers_08098 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 44 Score = 43.0 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F ++ + G C C I +I Q G+ + C CQ Sbjct: 6 RFQLFRREGLACY-RCSSRIIKINQGGQPCYLCPNCQ 41 >gi|291436888|ref|ZP_06576278.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291339783|gb|EFE66739.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 55 Score = 42.7 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 256 YGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 YG+ PCL C IR Q GR T++C CQ Sbjct: 2 YGRASRPCL-RCRTPIRLADQGDGSRGRPTYWCPVCQ 37 >gi|291385796|ref|XP_002709338.1| PREDICTED: nei like 2 [Oryctolagus cuniculus] Length = 334 Score = 42.7 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + F + + P+ + F+ Sbjct: 156 RGDWRDPAPRLVLYFGGGGFLAF---YNCQMSWSSSPVVRPTSDILSEKFHRGQALEALG 212 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI E L+RA + L + L L+ + Sbjct: 213 QAQ-PVCYTLLDQRYFSGLGNIIKNEVLYRAGVH------PLSLGSLLSPSCLEALVDHV 265 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + + Q +Y K P G + + Sbjct: 266 VEFSTHWLQD-------------KLQGRQQHPQIYQKEQCP----AGHQVLKQELGPPGG 308 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 309 FQRLTWWCPQCQ 320 >gi|41053628|ref|NP_956577.1| endonuclease VIII-like 1 [Danio rerio] gi|29612540|gb|AAH49408.1| Zgc:56361 [Danio rerio] Length = 437 Score = 42.7 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH------FSAATRGKKII--- 51 MPE PE+ + + + + + T + + A +RGK++ Sbjct: 1 MPEGPELHLASLFVNRMCEGVVFTGAVQKSEVNKNPEVPFCCDAYCIKAQSRGKEVRLTL 60 Query: 52 -----DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 D S + K + + ++++ GMSG F + P+H H+ Sbjct: 61 TPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSLD-----ELPKHAHLRFYTNE- 114 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T + + + D RRFG + K + P + +N + + + Sbjct: 115 --TPHWVLSFEDTRRFGSWQPNGSWQKNRGPCIMFEYESFRENVLSNLSDKAF----DKP 168 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 + ALLNQK GIGN E L+R ++ P K R+ Sbjct: 169 ICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKART 204 >gi|260801136|ref|XP_002595452.1| hypothetical protein BRAFLDRAFT_119048 [Branchiostoma floridae] gi|229280698|gb|EEN51464.1| hypothetical protein BRAFLDRAFT_119048 [Branchiostoma floridae] Length = 2880 Score = 41.9 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 38/145 (26%), Gaps = 7/145 (4%) Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 H F + + + + ++C+ + Sbjct: 111 PETAHYPHARGDCKIHSFKEVDLTTIGPVESNAKYCEKCYCFMCDVPANQCQQWTNPAGA 170 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 P + + + + ++ +RD V + V + G+P Sbjct: 171 HCNAYKCPSWLAQQTSKPSPLLSRLTVELMTQEVRDAVRRTDELVKGIQEEYVTFRKGKP 230 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYC 287 CL C Q++ T +C C Sbjct: 231 CLCTCHQLVA-------GTSWCEVC 248 >gi|328465600|gb|EGF36829.1| hypothetical protein LM1816_06750 [Listeria monocytogenes 1816] Length = 22 Score = 41.9 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 1 MPELPEVEIIRRNLMMVMKNMT 22 MPE+PEVE +R L ++ Sbjct: 1 MPEMPEVENVRATLQELVPGKK 22 >gi|45358782|ref|NP_988339.1| putative dinG ATP-dependent helicase [Methanococcus maripaludis S2] gi|45047648|emb|CAF30775.1| putative dinG ATP-dependent helicase [Methanococcus maripaludis S2] Length = 669 Score = 41.9 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 8/164 (4%) Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 Y++ L + ++ + KN ++ G Y+ AL+ Sbjct: 1 MDFYEFKEYSKEKFPYHGMRPQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPALY 60 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 A+ + + + L + + + G+ + Y Q Sbjct: 61 FAERGKRVMILTETIDQQERI--VEDLNSLKHNLKVSFMMGKGNFFCKAKGEKANTLYCQ 118 Query: 251 -NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC----QK 289 N +Y + + + CG +I G +TFYC C QK Sbjct: 119 LNKGCIY-RPNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQK 161 >gi|219116146|ref|XP_002178868.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409635|gb|EEC49566.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 367 Score = 41.9 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 116/317 (36%), Gaps = 57/317 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGK-KIIDVSRRA 57 MPELPEVE R+ L+ ++ + + I + ++ GK +D+ R+ Sbjct: 1 MPELPEVEQFRQLLLPLVSSSSPIQISAWKDNPPRVWLSEEQINS-LSGKYYCVDILRKG 59 Query: 58 KYLLI------------ELEGNLSIIVHLGMSGS---------FIIEHTSCAKPIKNPQH 96 K L I E + ++ + +H+GM+G + + + A P++ Sbjct: 60 KQLCIVLQPSKANGQKKEPKKSVYLYLHMGMTGRISSPNRESGWGRQSSKVADIEYPPRY 119 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 ++T T+ Y+ ++DPR+FG L + + L N + Sbjct: 120 TYLTF------ATEHYQAAFSDPRKFGKAVLSDNLDPFGLLAPDALNCNDEKLIRNE-II 172 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + S L ++ +G+GN E L++ + P + ++ + Sbjct: 173 PGFVEQTRSIKAILLDQNRVCSGVGNWVADEVLYQIGMHPDQ--------QYLTEEQGSR 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG----KTGEPCLSNCGQMIR 272 L + +Q ++ A+ S + Y + Y + G+ G+ + Sbjct: 225 LFETLQAIVRTAVGCLNSDTK----------YPDSWLFGYRWTKKRAGKDAA---GRALT 271 Query: 273 RIVQAGRSTFYCTYCQK 289 + GR++ QK Sbjct: 272 FLTSGGRTSAIVASVQK 288 >gi|56404528|sp|Q6R2P8|NEIL2_MOUSE RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|41057603|gb|AAR98807.1| nei-like 2 [Mus musculus] Length = 329 Score = 41.9 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 87/342 (25%), Gaps = 81/342 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-------------------DICLHRKN--LRFDFPH 39 MPE P V + + V D +H K LRFD Sbjct: 1 MPEGPSVRKFHHLVSPFVGQKVVKTGGSSKKLHPAAFQSLWLQDAQVHGKKLFLRFDPDE 60 Query: 40 HFS------AATRGKKIIDVSRRAKYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 +G + R L E S S S + Sbjct: 61 EMEPLNSSPQPIQGMWQKEAVDRELALGPSAQEPSAGPSGSGEPVXSRSAETYNLGKIPS 120 Query: 91 IKNPQHNHVTISL-------------------TNNTNTKKYRVIYNDPRRFGFMDLVETS 131 + V L + + ++ F + + Sbjct: 121 ADAQRWLEVRFGLFGSXWVNDFSRAKKANKKGDWRDPVPRLVLHFSGGGFLVFYNCQMSW 180 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 + A+ Q + LL+QK +G+GNI EAL+R Sbjct: 181 SXXPVIEPTCDILSEKFHRGQALEALSQAQ----PVCYTLLDQKYFSGLGNIIKNEALYR 236 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A++ P+ L + + ++ LRD + Sbjct: 237 ARIHPLSLGSCLSS-------------SSREAFVDHVVEFSKDWLRDKFQGK------ER 277 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 +Y K E C S G + + R T++C CQ Sbjct: 278 HTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 315 >gi|134045416|ref|YP_001096902.1| DNA repair helicase RAD3 [Methanococcus maripaludis C5] gi|132663041|gb|ABO34687.1| DNA repair helicase RAD3 [Methanococcus maripaludis C5] Length = 669 Score = 41.9 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYC----QK 289 + + + CG +I G +TFYC C QK Sbjct: 126 RPNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQK 161 >gi|37681885|gb|AAQ97820.1| nei endonuclease VIII-like 1 [Danio rerio] Length = 438 Score = 41.5 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH------FSAATRGKKII--- 51 MPE PE+ + + + + + T + + A +RGK++ Sbjct: 1 MPEGPELHLASLFVNRMCEGVVFTGAVEKSEVNKNPEVPFCCDAYCIKAQSRGKEVRLTL 60 Query: 52 -----DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 D S + K + + ++++ GMSG F + P+H H+ Sbjct: 61 TPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSVD-----ELPKHAHLRFYTNE- 114 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T + + D RRFG + K + P + +N + + + Sbjct: 115 --TPHRVLSFEDTRRFGSWQPNGSWQKNRGPCIMFEYESFRENVLSNLSDKAF----DKP 168 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 + ALLNQK GIGN E L+R ++ P K R+ Sbjct: 169 ICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKART 204 >gi|194038635|ref|XP_001924578.1| PREDICTED: endonuclease 8-like 1 [Sus scrofa] Length = 389 Score = 41.5 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 76/212 (35%), Gaps = 18/212 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHH-----FSAATRGKKIIDVS 54 MPE PE+ + + + R P SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACGELVFGGCVEKSPVSRNPEVPFESSAYHISALARGKELRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L+++ GM+GSF + P H H+ + + + Sbjct: 61 SPLPGAQP-PQEPLALVFRFGMTGSFQLVPRDA-----LPPHAHLR--FYTAPPSPQLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG +L + P + + +N + + + ALL+Q Sbjct: 113 CFVDIRRFGRWELGGEWDPGRGPCVLLEYEQFRENVLRNLADKAF----DRPICEALLDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + GIGN E L R ++ P K R++++ Sbjct: 169 RFFNGIGNYLRAEILHRLRIPPFEKARTVLEA 200 >gi|126272518|ref|XP_001379906.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli) [Monodelphis domestica] Length = 420 Score = 41.1 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 33/276 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMT----VTDICL-HRKNLRFDFPH-HFSAATRGKKIIDVS 54 MPE PE+ + + + K++ V + + F+ SA +RGK++ Sbjct: 1 MPEGPELYLASCYVNSMCKDLVFAGPVEKSEVSRNPEVPFESSAYRISATSRGKEVRLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + L ++ GMSGSF + P+H H+ + + + Sbjct: 61 SPLPKAHP-PQEPLDLVFRFGMSGSFQLVPADA-----LPKHAHLR--FYTISPAPRQAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFG ++ T + P + + +N + + + ALL Q Sbjct: 113 CFVDVRRFGHWEVQGTWQPGRGPCVLQEYEKFRENVLQNLANKTF----DKPICEALLEQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN----NGTPKDILYK----------LIQE 220 + GIGN E L+R K+ P K R++++ P+ L K L++ Sbjct: 169 RFFNGIGNYLRAEILYRLKIPPFEKARTVLEALKHRRQDPELTLSKKIKAKLENPDLLEL 228 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 V ++ I GG D F+ Y Sbjct: 229 CHSVPMEVIQLGGKGYGPDREED-DFAAFRAWLRCY 263 >gi|300867862|ref|ZP_07112504.1| hypothetical protein OSCI_3490060 [Oscillatoria sp. PCC 6506] gi|300334193|emb|CBN57680.1| hypothetical protein OSCI_3490060 [Oscillatoria sp. PCC 6506] Length = 186 Score = 41.1 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 9/96 (9%) Query: 3 ELPEV--EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 ELPEV E + V++ T+T H +L FS + K D++ Sbjct: 92 ELPEVFKEKV-----KVIEGTTITAFETHYPDLILTV--EFSNGCKLKIFPDLADDFDLS 144 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 EL ++++ L + K K QH Sbjct: 145 YWELFTPDNMLLTLEPGAIWTYTRADVPKSAKINQH 180 >gi|311740725|ref|ZP_07714552.1| L-seryl-tRNA selenium transferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304245|gb|EFQ80321.1| L-seryl-tRNA selenium transferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 438 Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 3/49 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKK 49 LPEVE R+ L + + + + P + K Sbjct: 25 LPEVESARQRLAEHAIRAIIQGVVTQARRGQLPVSDIPAEIAQRLEQKT 73 >gi|260806535|ref|XP_002598139.1| hypothetical protein BRAFLDRAFT_82922 [Branchiostoma floridae] gi|229283411|gb|EEN54151.1| hypothetical protein BRAFLDRAFT_82922 [Branchiostoma floridae] Length = 894 Score = 40.0 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 78/296 (26%), Gaps = 65/296 (21%) Query: 8 EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH------------HFSAATRGKKIIDVSR 55 E + R +K V R R + S G + +V Sbjct: 12 ERLVR-----LKGQRVVQTQWGRNRTRPEGAAKGSGAEQKDTTSEKSDHLVGLPLSNVET 66 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K L + + VH GM+GS I+ K + Sbjct: 67 LGKELFVYFGDF-CLRVHFGMNGSVQIKGHRNKAFQKTS------------EPVLTLTLT 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQ 174 + + +S L+ + F+ T + L + LL+Q Sbjct: 114 VDSVSFHDCTVQIRSSSDCHDKYLQFQSLDICSTHFSLSQATRTVSCHGDRMLCDVLLDQ 173 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++ G+GNI E L K ++ + +L G Sbjct: 174 SVLPGVGNIIKNEVLQL--------------KEEHVKHLVK--MTRDFSMLFYKCRKEGR 217 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 +L VY + C C I GR T++C CQ Sbjct: 218 ALS-------------RHCKVYKRQW--CG-QCQGRITVCRMGENGRMTYFCEGCQ 257 >gi|266620785|ref|ZP_06113720.1| putative glycosyltransferase [Clostridium hathewayi DSM 13479] gi|288867571|gb|EFC99869.1| putative glycosyltransferase [Clostridium hathewayi DSM 13479] Length = 355 Score = 40.0 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 I++ L+ + + + A G D+ I F + Y + G Sbjct: 223 EYIESEKPQHVKLFGFFPKEEYDSMIACCDIGLVFLDHRFT---IPNFPSRLLAYMQAGL 279 Query: 262 P--CLSNCGQMIRRIVQAGRSTFYCTY 286 P C ++ + ++V GR ++C Sbjct: 280 PVLCCTDKNTDVGKVVVNGRFGWWCPS 306 >gi|302554565|ref|ZP_07306907.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472183|gb|EFL35276.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 51 Score = 39.6 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 5/37 (13%) Query: 256 YGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 YG+ PCL C +R Q R T++C CQ Sbjct: 2 YGRAPRPCL-RCRTSVRVADQGDGSRERPTYWCPTCQ 37 >gi|297283656|ref|XP_001087999.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Macaca mulatta] Length = 1301 Score = 39.6 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 31/125 (24%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 120 PEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQE 179 Query: 253 F------SVY-------GKTGEPCL--------------SNCGQMIRRIVQAG-RSTFYC 284 F V+ ++G+P L C ++ + QA RS+ C Sbjct: 180 FLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPFPVCSTFVQELFQAQYRSSLTC 239 Query: 285 TYCQK 289 +CQK Sbjct: 240 PHCQK 244 >gi|325066952|ref|ZP_08125625.1| formamidopyrimidine-DNA glycosylase [Actinomyces oris K20] Length = 163 Score = 39.6 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 25/102 (24%), Gaps = 9/102 (8%) Query: 4 LPEVEIIRR---NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE I R L + + + RF ++ G+ ++ K+L Sbjct: 1 MPEGHTIHRLAAALDELYGGQ---SLRVRSPQGRF---ADGASRLDGQVLLGSQAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 + + + I + Sbjct: 55 FLPFGPRADMSLDDDSVTWLRIHLGLYGAWTFDGDREFTAPH 96 >gi|85859068|ref|YP_461270.1| acetyl-CoA CoA transferase / acetyltransferase [Syntrophus aciditrophicus SB] gi|85722159|gb|ABC77102.1| acetyl-CoA CoA transferase / acetyltransferase [Syntrophus aciditrophicus SB] Length = 632 Score = 39.6 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 28/255 (10%), Positives = 68/255 (26%), Gaps = 14/255 (5%) Query: 6 EVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELE 65 EV I +L + L+R ++R+ + A GK I + + + Sbjct: 378 EVSRIVPSLSES------AGVTLNRSDVRYVVTEYGIAYLHGKTIRE-RAMELIAIAHPK 430 Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 ++ G + + + P+H + + N + D F Sbjct: 431 FRPWLLEEAKKRGLVYRDQVFHGEKGEYPEHLETHRTTSAGLNIFLRPIKITDETLFRDF 490 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + + + ++ ++++ GI + Sbjct: 491 IHGLSDTSLYLRFFSR-RFDMPHERIQEMIAIDYTKQMVICATVPIMKKEMIIGIARYTI 549 Query: 186 CEALWRAKLSPIRK---TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 E+ A ++ + R I Q + + + L + Sbjct: 550 DESSHWADVAFAVRDLFHRKGIGTELLSYMTYLAKRQGLLGFTASVLMENEAMLNTFARE 609 Query: 243 DGS---IGYFQNAFS 254 G G ++ F Sbjct: 610 KGEFEITGNLKSGFY 624 >gi|291390761|ref|XP_002711890.1| PREDICTED: ubiquitin specific peptidase 31 [Oryctolagus cuniculus] Length = 1312 Score = 39.6 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 132 PEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 191 Query: 253 F------SVY-------GKTGEPC---------------LSNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P C ++ + QA RS+ Sbjct: 192 FLLWLLDRVHEDLNHAVKQSGQPPVKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 251 Query: 284 CTYCQK 289 C +CQK Sbjct: 252 CPHCQK 257 >gi|332225073|ref|XP_003261702.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Nomascus leucogenys] Length = 1284 Score = 39.6 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 104 PEQPAGRDAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQE 163 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 164 FLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 223 Query: 284 CTYCQK 289 C +CQK Sbjct: 224 CPHCQK 229 >gi|156397193|ref|XP_001637776.1| predicted protein [Nematostella vectensis] gi|156224891|gb|EDO45713.1| predicted protein [Nematostella vectensis] Length = 790 Score = 39.2 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 20/193 (10%), Positives = 39/193 (20%), Gaps = 23/193 (11%) Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + +++ F +Y + + + + + + Sbjct: 9 WLLVFPTFLNFALCSNKCKWNEYITKDIVGNEACVKCPNCAEGHGLMPECGSHISYGDKF 68 Query: 172 LNQKIVAG--IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL-----IQEIQKV 224 G + + L P +K +I + Sbjct: 69 RCVPCTDGETYSSSNDLTSCRPCSLCPHKKVIQKCNATQNSICDTRNCEEGFYYDDITRD 128 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM---------IRRIV 275 G D G Y TG CL C +++ Sbjct: 129 CQPCSWCCGDGKDDIKMSCKVKGQSSYKLCTYD-TGRRCLPRCTNKQYVVVDLKTLKKTC 187 Query: 276 QAGRSTFYCTYCQ 288 Q C CQ Sbjct: 188 QE------CPTCQ 194 >gi|332845543|ref|XP_003315066.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Pan troglodytes] Length = 1358 Score = 39.2 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 178 PEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQE 237 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 238 FLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 297 Query: 284 CTYCQK 289 C +CQK Sbjct: 298 CPHCQK 303 >gi|120587027|ref|NP_065769.3| ubiquitin carboxyl-terminal hydrolase 31 [Homo sapiens] gi|134047944|sp|Q70CQ4|UBP31_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 31; AltName: Full=Deubiquitinating enzyme 31; AltName: Full=Ubiquitin thiolesterase 31; AltName: Full=Ubiquitin-specific-processing protease 31 gi|162318536|gb|AAI56335.1| Ubiquitin specific peptidase 31 [synthetic construct] Length = 1352 Score = 39.2 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 172 PEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQE 231 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 232 FLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 291 Query: 284 CTYCQK 289 C +CQK Sbjct: 292 CPHCQK 297 >gi|40788185|emb|CAE51935.2| ubiquitin-specific proteinase 31 [Homo sapiens] Length = 1352 Score = 39.2 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 172 PEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQE 231 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 232 FLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 291 Query: 284 CTYCQK 289 C +CQK Sbjct: 292 CPHCQK 297 >gi|297464214|ref|XP_002703139.1| PREDICTED: ubiquitin specific peptidase 31 [Bos taurus] Length = 1324 Score = 38.8 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 147 PEQPAGRGEQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 206 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 207 FLLWLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 266 Query: 284 CTYCQK 289 C +CQK Sbjct: 267 CPHCQK 272 >gi|297490186|ref|XP_002698069.1| PREDICTED: ubiquitin specific peptidase 31, partial [Bos taurus] gi|296473366|gb|DAA15481.1| ubiquitin specific peptidase 31 [Bos taurus] Length = 1266 Score = 38.8 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 88 PEQPAGRGEQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 147 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 148 FLLWLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 207 Query: 284 CTYCQK 289 C +CQK Sbjct: 208 CPHCQK 213 >gi|301783509|ref|XP_002927172.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like, partial [Ailuropoda melanoleuca] Length = 1228 Score = 38.8 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 50 PEQPVGRGTQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 109 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 110 FLLWLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 169 Query: 284 CTYCQK 289 C +CQK Sbjct: 170 CPHCQK 175 >gi|281342720|gb|EFB18304.1| hypothetical protein PANDA_016924 [Ailuropoda melanoleuca] Length = 1225 Score = 38.8 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 42 PEQPVGRGTQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 101 Query: 253 F------SVY-------GKTGEPCL---------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 102 FLLWLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 161 Query: 284 CTYCQK 289 C +CQK Sbjct: 162 CPHCQK 167 >gi|224061749|ref|XP_002195293.1| PREDICTED: nei endonuclease VIII-like 1 [Taeniopygia guttata] Length = 379 Score = 38.8 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 25/206 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + R S A I R K L Sbjct: 1 MPECPELHLAGRFINGACGALVFAGAVERSAVGRGPEVPFRSEAYS----ISAVARGKEL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + P+H H+ + + + DPR Sbjct: 57 RLTLSALDPA--------------AGPSAQDLLPRHAHLRFL---TRESPPRALCFVDPR 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + + P + + +N + + + LLNQK GI Sbjct: 100 RFGSWRLGDAWQPERGPCVVSEYQAFRENVLKNLDDRAF----DKPICEVLLNQKYFNGI 155 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN 206 GN E L+R K+ P K R++++ Sbjct: 156 GNYLRAEILYRLKIPPFEKARTVLEA 181 >gi|73958749|ref|XP_547094.2| PREDICTED: similar to ubiquitin specific protease 31 [Canis familiaris] Length = 1250 Score = 38.8 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 32/126 (25%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQ---KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 P + Q G + L L++ + + D ++ + G+ + Sbjct: 71 PEQPVGRGTQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQE 130 Query: 253 F------SVY-------GKTGEPC---------------LSNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P C ++ + QA RS+ Sbjct: 131 FLLWLLDRVHEDLNHAVKQSGQPPVKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLT 190 Query: 284 CTYCQK 289 C +CQK Sbjct: 191 CPHCQK 196 >gi|300871565|ref|YP_003786438.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] gi|300689266|gb|ADK31937.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] Length = 217 Score = 38.4 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 75/220 (34%), Gaps = 27/220 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT----VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M ELP NL+ +K + ++ K +G+KIIDV R Sbjct: 1 MKELP----YLINLINALKGEICYSYINNVVALDKKY-----KELEE-VKGQKIIDVLRH 50 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ + + + V LG GSF++ + K + + N + V+ Sbjct: 51 GGYMHFQFSQDAML-VDLGSGGSFVLTENNTYKNA------IIKLETDNG----NFFVVD 99 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + ++ Y P P ++N + ++ + N I Sbjct: 100 ESKDKDDATHIIPIWKDYTTMPQVGYDPLTKQFNYNLFC--QLLADNATTVEKLIKNPLI 157 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 ++GIG+ Y L RA ++ KT + + K Sbjct: 158 ISGIGDTYGDMILKRASITKRTKTTDINKAKAREIFDAIK 197 >gi|260799977|ref|XP_002594913.1| hypothetical protein BRAFLDRAFT_168572 [Branchiostoma floridae] gi|229280151|gb|EEN50924.1| hypothetical protein BRAFLDRAFT_168572 [Branchiostoma floridae] Length = 199 Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 41/225 (18%) Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 I H M GS N S T + + + F Sbjct: 11 WIRYHFLMWGSLR----------ANEYKGISRQSKTGKVPVPRLVLHFAKEEFLAFYGGS 60 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + T + + A + + LL+Q +G+GNI E Sbjct: 61 MGEVDSPACDQGTDILTASFDVEKAADAIQRAQ----PVCYTLLDQTCFSGLGNIIKNEV 116 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+ AK+ P++ Q + + + + Sbjct: 117 LYAAKVHPLQPG------------------QLLSRQRALGMVQQALAFSSTWMEHKDEHK 158 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 F+ + +Y K P G R R T +C+ CQ Sbjct: 159 FKEHWQIYFKKDCPL----GHKTSRDWFGPEDGLQRVTTWCSTCQ 199 >gi|255324421|ref|ZP_05365538.1| L-seryl-tRNA selenium transferase [Corynebacterium tuberculostearicum SK141] gi|255298327|gb|EET77627.1| L-seryl-tRNA selenium transferase [Corynebacterium tuberculostearicum SK141] Length = 438 Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 3/49 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKK 49 LPEVE R+ L + + + P + K Sbjct: 25 LPEVESARQRLAEHAIRAIIQGAVTQARRGQLPVSDIPAEIAQRLEQKT 73 >gi|225620719|ref|YP_002721977.1| Formamidopyrimidine-D glycolase [Brachyspira hyodysenteriae WA1] gi|225215539|gb|ACN84273.1| Formamidopyrimidine-D glycolase [Brachyspira hyodysenteriae WA1] Length = 218 Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 19/216 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 M ELP + + ++ + + I K + G+KIIDV R Y+ Sbjct: 1 MKELPNLITLINSIKSEICYSYINKIVAIDKQYKE------MEDIEGQKIIDVLRYGGYM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + V LG +GSF++ + L T+ + V+ + Sbjct: 55 HFQFSQDAML-VDLGPNGSFVLTEDDTYENS----------ILKLETDHGNFFVVDDGKD 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + ++ P P ++N ++ ++ + N I++GI Sbjct: 104 KNEITKIIPIWKDSTTMPQIGYDPLTKQFNYNLFC--QLLADNDTTVEKLIKNPLILSGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 GN+Y L +A ++ KT + + K Sbjct: 162 GNVYGDMILKKASITKKTKTSDVTKVKAREIFDAIK 197 >gi|206599561|ref|YP_002242000.1| gp17 [Mycobacterium phage Brujita] gi|206282710|gb|ACI06231.1| gp17 [Mycobacterium phage Brujita] gi|302858454|gb|ADL71201.1| gp17 [Mycobacterium phage island3] Length = 575 Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 5/121 (4%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG--TPKDI 213 +TH + + + E+ A L + K+ Sbjct: 1 MTHYPKGPITPQAAYYHLKGRYPLVTLWAYDESNSFALLGGKAIPNRFDEPEYVAIKKNG 60 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L LI + G + D + G + + V+G+ + C C +++ Sbjct: 61 LKGLIAPWDIIDQKGASEDGVTFVDALQGPGEV---ELKLLVHGRDPQHCRKLCREIVAS 117 Query: 274 I 274 I Sbjct: 118 I 118 >gi|310796690|gb|EFQ32151.1| hypothetical protein GLRG_07295 [Glomerella graminicola M1.001] Length = 1036 Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 22/258 (8%), Positives = 57/258 (22%), Gaps = 21/258 (8%) Query: 21 MTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF 80 T+ + + RF A + R+ ++ + + H + Sbjct: 667 QTIAVAKISATSRRFAVHQCAQKALESWHVDVAHNRSLHMWAKRGCFYVSVTHALETWRS 726 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 S + HV + T R Sbjct: 727 KASWRSNTRKSYARCRQHVKATFTKG---YLSRWKIATRAHGNISWETHQHHNAMNRDRL 783 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV---AGIGNIYVCEALWRAKLSPI 197 T + + + + + +++ + R Sbjct: 784 TRMLCAWRDESSNDWGACRLLTAAWVGQWQSMSEDHAGMQTRAEQAWGVTLESRYWSQWQ 843 Query: 198 R-----KTRSLIQ---NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 K+R + K ++ +L+ + A+ + R F Sbjct: 844 STLLQLKSREYVALDVRERNRKKVVRRLLLHWKGDRDFAMSQQSMATRANFASSRRGAGF 903 Query: 250 QNAF-------SVYGKTG 260 + +V+ ++G Sbjct: 904 GLSHSAVPLSRAVHERSG 921 >gi|294663885|ref|ZP_06729325.1| endonuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606343|gb|EFF49554.1| endonuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 134 Score = 37.3 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 42/147 (28%), Gaps = 24/147 (16%) Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 A +ALL+Q I AG+GNI E L R ++ P +L Sbjct: 2 MNPLWDAAQARRKLRAAPAMLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESTVGALPA 61 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 + A + + V+ +T Sbjct: 62 RKLGELVTQARDYSFDFYTWKKAFVL------------------KKHYQVHTRTR---CP 100 Query: 266 NCGQMIRRIVQ---AGRSTFYCTYCQK 289 G ++ AGR F+C CQ+ Sbjct: 101 RDGAPLQYRKHLGKAGRRAFFCEVCQR 127 >gi|325281750|ref|YP_004254292.1| hypothetical protein Odosp_3152 [Odoribacter splanchnicus DSM 20712] gi|324313559|gb|ADY34112.1| hypothetical protein Odosp_3152 [Odoribacter splanchnicus DSM 20712] Length = 1107 Score = 36.9 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 17/218 (7%) Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 M+ ++ A+ + T + + + G + + Sbjct: 776 CWNRRWQMNMDSMVHSWQAARHTHYFRVKDAVRYYDEQTGLHRLDALVRNMGNCGGIFSI 835 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 E + A YL+ + + N G Y+ Sbjct: 836 ECGSL-----MTRKNVHAYFAPHEAKYLSLIVQGASRDADWMAGNSSDKIGYMYAYLSTN 890 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 A ++ + + P + + E + + I + + + + + Sbjct: 891 RPIAWWGDNKRCSPEMAASWKPGFVCRTISDEEFEKSDENIWLVDDTDAGFEVKNNNESW 950 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 FQ F +P I +AGRS+ + Sbjct: 951 FQRKF-----GKKPTYRV-------ITRAGRSSRWVPV 976 >gi|149625701|ref|XP_001521074.1| PREDICTED: similar to NEIL2 protein, partial [Ornithorhynchus anatinus] Length = 191 Score = 36.9 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 9/44 (20%) Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + + +Y + C G + + R T++C CQ Sbjct: 138 RQPYRIYRR---RCCPE-GHPVTKQSLGPPGRLRRLTWWCPLCQ 177 >gi|257056561|ref|YP_003134393.1| excinuclease ABC subunit A [Saccharomonospora viridis DSM 43017] gi|256586433|gb|ACU97566.1| Excinuclease ABC subunit A [Saccharomonospora viridis DSM 43017] Length = 953 Score = 36.9 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 10/20 (50%) Query: 256 YGKTGEPCLSNCGQMIRRIV 275 Y + G+P CG+ I + Sbjct: 113 YARAGKPHCPRCGEPISKQT 132 >gi|320163082|gb|EFW39981.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 660 Score = 36.5 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 18/169 (10%), Positives = 40/169 (23%), Gaps = 9/169 (5%) Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 F Q + + T + + + Sbjct: 209 FHMTKLMGETVQTYGWECSNCKSCAMCNSTENETEMLLCDVCDRGYHIQCIDLKTMPLGR 268 Query: 184 YVCEALWRAKLSPIRKTRSLIQ-NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 +VC + +++ + + S +Y I Sbjct: 269 WVCSLCNACTNCHSKLAGAILPRKEMDRPVDWLTFYATDVQSMKFCSARSSWSQHEYCAI 328 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSN----CGQMIRRIVQAGRSTFYCTYC 287 + + +Y G CL C ++ +R GR+ ++C C Sbjct: 329 CLKVNHPGEKLRLYKCDG--CLRQTHPSCDKLYKRPR--GRTRYFCPIC 373 >gi|182677062|ref|YP_001831208.1| coproporphyrinogen III oxidase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632945|gb|ACB93719.1| Coproporphyrinogen oxidase [Beijerinckia indica subsp. indica ATCC 9039] Length = 301 Score = 36.5 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 16/187 (8%), Positives = 37/187 (19%), Gaps = 3/187 (1%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII-DVSRRAKYLLIELEGNLSIIVHLG 75 ++K +H + F F++ G + L+ VH+ Sbjct: 72 LLKGRVFEKAGIHASTVFGRFAPEFASQIPGAEADPRFWASGLSLIAHPVNPNVPTVHMN 131 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 + P + + + + + D Sbjct: 132 TRFVVTSKGWFGGGADLTPMLDRRRMQNDKDAIDFHAAMREACDKHKDVADYPRLKDWCD 191 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 EP + + A + + E + R Sbjct: 192 EYFYLKHRNEPRGIGGVFFDYFDCPDETIFDANFAFAQE--IGRAFLAIYPEIVRRNWAQ 249 Query: 196 PIRKTRS 202 P + Sbjct: 250 PWTEADR 256 >gi|47225855|emb|CAF98335.1| unnamed protein product [Tetraodon nigroviridis] Length = 285 Score = 36.1 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 37/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH------HFSAATRGKKIIDVS 54 MPE PE+ + + + + + T + + +AA+RGK++ Sbjct: 1 MPEGPELHLASLYVNKMCQGLIFTGAVRKSEVSKAPDVPFTCEAYRITAASRGKEVKLTL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + + + I+ GMSG F + + P+H+H+ + Sbjct: 61 TP---MKSQGDQPMDIVFRFGMSGYFRLTTED-----ELPKHSHLRFYSNEE---PCRVL 109 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--------HKKNSN 166 + D R FG T + P + T A + Sbjct: 110 SFVDTRSFGSWQPGGTWQPSRGPCVITEYKSFRSVLMRASVTQRTPSASLTRPLSHREKV 169 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 L++ + + + + ++ K+ S K+ L++ V + Sbjct: 170 LQHCRTGPLTGPSVKSCSIKSTSTVSAITSGLKSCSGRNKRVGIKEEKGDLLRLCHTVPL 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +D GG+ Y F+ Y G + GR+ ++ Sbjct: 230 EVVDLGGTF---YDSEKEDYSDFKAWLQCYCVDGMKSARD---------HNGRTVWF 274 >gi|158312015|ref|YP_001504523.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] gi|158107420|gb|ABW09617.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] Length = 26 Score = 36.1 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRST 281 +G+ G PC CG +R + A RS Sbjct: 2 HGQAGLPC-PRCGDTVREVSFADRSL 26 >gi|222148105|ref|YP_002549062.1| proline iminopeptidase [Agrobacterium vitis S4] gi|221735093|gb|ACM36056.1| proline iminopeptidase [Agrobacterium vitis S4] Length = 321 Score = 36.1 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 52/213 (24%), Gaps = 19/213 (8%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 G + HL + ++ + + + + + Y Sbjct: 72 RGCGKSTPHAHLDANTTWHLVADIERLRDMIGVEKWLVFGGSWGST---LALAYAQTYPE 128 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG- 181 +LV + + + H ++ +++ G Sbjct: 129 RVSELVLRGIYTLTKAELDWYYQFGVSEMYPDRWEHFIAPIPLEERHDMISAYHRRLTGE 188 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQN--------NGTPKDILYKLIQEIQKVLIDAIDAGG 233 + V A RA T SLI N +L I G Sbjct: 189 DKEVQLACARAWSQWEGATISLIPNLQQIENFGEDHYAIAFARLENHFFMNRIW--MEDG 246 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 LRD + G G V+G+ PC Sbjct: 247 QLLRDAHKLKGIPG-----VIVHGRYDMPCPLR 274 >gi|167625905|ref|YP_001676199.1| hypothetical protein Shal_4000 [Shewanella halifaxensis HAW-EB4] gi|167355927|gb|ABZ78540.1| hypothetical protein Shal_4000 [Shewanella halifaxensis HAW-EB4] Length = 84 Score = 35.7 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 7/33 (21%) Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + PC CG I R T+ C +CQ+ Sbjct: 51 NRKMLPC-PECGDRIH------RHTYICPHCQQ 76 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.307 0.109 0.333 Lambda K H 0.267 0.0337 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,430,073,384 Number of Sequences: 14124377 Number of extensions: 52548271 Number of successful extensions: 193737 Number of sequences better than 10.0: 2770 Number of HSP's better than 10.0 without gapping: 2451 Number of HSP's successfully gapped in prelim test: 319 Number of HSP's that attempted gapping in prelim test: 184729 Number of HSP's gapped (non-prelim): 3237 length of query: 289 length of database: 4,842,793,630 effective HSP length: 138 effective length of query: 151 effective length of database: 2,893,629,604 effective search space: 436938070204 effective search space used: 436938070204 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 80 (35.7 bits)