RPSBLAST alignment of GI: 254780625 and protein with PDBid: 3gpu

>3gpu_A DNA glycosylase; DNA glycosylase, DNA repair, damage search, base extrusion; HET: DNA 8OG; 1.62A {Geobacillus stearothermophilus} PDB: 3gpx_A* 3gq3_A* 2f5n_A 2f5o_A 2f5p_A 3gp1_A* 3gq4_A* 3gpy_A* 3gq5_A* 3gpp_A* 2f5q_A* 2f5s_A* 1l1z_A* 1l1t_A* 1l2b_A* 1l2c_A* 1l2d_A* 1r2z_A* 1r2y_A* 3jr5_A* ... Length = 256
 Score =  136 bits (342), Expect = 7e-33
 Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 36/290 (12%)

Query: 2   PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59
           PELPEVE IRR L+ ++   T+ D+ +   N+         F+A   G+ +  + RR K+
Sbjct: 1   PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60

Query: 60  LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119
           L   L    ++I HL M G + +             H HV    T+ +      + Y D 
Sbjct: 61  LKF-LLDRDALISHLRMEGRYAVASALE----PLEPHTHVVFCFTDGS-----ELRYRDV 110

Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179
           R+FG M +       + PPL  LGPEP   +F+   L  +  K   ++K  LL+  +VAG
Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170

Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239
            GNIYV E+L+RA + P R   SL            +L +E+   + +A+  G       
Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKEI------ERLHEEMVATIGEAVMKG------- 217

Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289
                     Q+   VYG+ G PC   CG  I + V AGR T YC  CQ+
Sbjct: 218 ----------QHHLYVYGRQGNPCK-RCGTPIEKTVVAGRGTHYCPRCQR 256