HHSEARCH alignment of GI: 254780626 and SCOP domain: d2uubt1

Alignment

Probab=99.93  E-value=4e-26  Score=174.00  Aligned_cols=87  Identities=38%  Similarity=0.493  Sum_probs=85.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             98999999999999999999999999999999999960898999999999999999998658861669999999999999
Q gi|254780626|r    4 KDSAKKMIRKIARRTLINKSRRSSVRSFMRHANEAITFGKIEEATEACRKAESVIQKAKSKGIFHGNAASRKVSRLSKRL   83 (90)
Q Consensus         4 ~kSa~Kr~r~~~krr~~N~~~ks~~kt~iKk~~~ai~~~d~~~a~~~~~~~~s~lDka~kkgiihkn~AsRkKSrL~~~v   83 (90)
                      |+||+||+||+++++++|++++|.|||++|+|+.+|++||.+++.++|+.+++.||+++++||||+|+|+|++|||+++|
T Consensus         2 ~~SA~KRiRq~~krr~rN~~~kS~~kT~iKk~~~ai~~~d~e~A~~~l~~a~s~iDKAakKgiiHkN~AaRkKSRL~k~v   81 (99)
T d2uubt1           2 NLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKV   81 (99)
T ss_dssp             CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTSSTTCSHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             76279999999999999999999999999999999872688999999999999999998679877114889999999999


Q ss_pred             HHHHHCC
Q ss_conf             9984269
Q gi|254780626|r   84 KGILTSA   90 (90)
Q Consensus        84 ~~~~~~A   90 (90)
                      +++.++|
T Consensus        82 ~~l~~~a   88 (99)
T d2uubt1          82 RQLLEAA   88 (99)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHHH
T ss_conf             9987521

SCOP domain information

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Ribosomal protein S20
family: Ribosomal protein S20
domain: Ribosomal protein S20
species: Thermus thermophilus [TaxId: 274]