HHsearch alignment for GI: 254780627 and conserved domain: CHL00081
>CHL00081 chlI Mg-protoporyphyrin IX chelatase.
Probab=97.96 E-value=0.0027 Score=43.47 Aligned_cols=249 Identities=16% Similarity=0.221 Sum_probs=128.6
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH----------HHHCCCCCEE
Q ss_conf 478876328861478999999998241001365555548986278888579999999999----------8630688168
Q gi|254780627|r 161 RFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANAS----------IKRQPNLRVV 230 (502)
Q Consensus 161 ryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~----------~~~~~~~~v~ 230 (502)
T Consensus 8 ~fPf~a-IvGQe~~--k~aLll~av~p~iG-------gVLi~G~~GtgKStlvRala~lLP~i~~v~~~~f~~~p~~p~~ 77 (347)
T CHL00081 8 VFPFTA-IVGQEEM--KLALLLNVIDPKIG-------GVMIMGDRGTGKSTTIRALVDLLPEIEVVKNDPFNSDPRDPDL 77 (347)
T ss_pred CCCHHH-HCCHHHH--HHHHHHHHCCCCCC-------EEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
T ss_conf 898406-5384999--99999982578878-------6998789987499999999985787422068876789898100
Q ss_pred EEE----------------------------HHH-H--HHHHHHHHHCCCHHHHHHHH---HHCCHHHHHHHHHHCCCCH
Q ss_conf 646----------------------------988-8--99999998619889999997---4031020544445317506
Q gi|254780627|r 231 YLT----------------------------AEY-F--MWRFASAIRDNCALNLKDSL---RNIDLLLIDDMQFLQGKLI 276 (502)
Q Consensus 231 y~~----------------------------~e~-F--~~~~~~a~~~~~~~~fr~~~---r~~DvLliDDiqfl~gk~t 276 (502)
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~v~lPlgaTEDrv~GslDie~al~~G~-~~f~pGlLa~A~rGiLyvDEINll~d-~~ 155 (347)
T CHL00081 78 MSDEVRERIRNGEKIPTKKIKIPMVDLPLGATEDRVCGTIDIEKALTEGV-KAFEPGLLAKANRGILYVDEVNLLDD-HL 155 (347)
T ss_pred CCHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCEECCCHHHHHHHHCCC-CCCCCCHHHHCCCCEEEEEHHHHHHH-HH
T ss_conf 24266654314666752114686253688885230114000998984587-11565312220388588614543237-99
Q ss_pred HHHHHHHHHH----HHHCC-------CEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEEC-CCCHHHHHHHHHHHHHH--
Q ss_conf 9999999999----88569-------8799964875676136303457653021157751-58889999999999988--
Q gi|254780627|r 277 QHEFCHLLNS----LLDSA-------KQVVAAADRPPSELESLDPRIRSRLQGGVSVPLG-LHDYEMRFSILKNRLAI-- 342 (502)
Q Consensus 277 qee~f~~~n~----l~~~g-------kqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~-~Pd~e~r~~Il~~k~~~-- 342 (502)
T Consensus 156 v~~LLda~a~G~~~VEReG~S~~~Pa~F~liaT~N-PeE-geLrp~llDRF~--l~v~v~~~~~~e~R~eiv~~r~~f~~ 231 (347)
T CHL00081 156 VDILLDSAASGWNTVEREGISIRHPARFVLIGSGN-PEE-GELRPQLLDRFG--MHAEIRTVKDPELRVKIVEQRSNFDK 231 (347)
T ss_pred HHHHHHHHHCCEEEECCCCEEECCCCCEEEEECCC-CCC-CCCCHHHHHHEE--EEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999998558089804642330575006885578-655-674888882632--26745887898999999999997651
Q ss_pred ----------------------HHHHCCCCCCCHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHC-C-CCCHHHHH
Q ss_conf ----------------------64311689789899999985027----88899999999999986302-4-68778899
Q gi|254780627|r 343 ----------------------SQKEDPKLNINEEVLMHVARTVT----TSGRELDGAFNQLVFRHSFA-P-ILTAEIAD 394 (502)
Q Consensus 343 ----------------------~~~~~~~~~l~~~v~~~la~~~~----~~vR~Legal~~l~~~~~~~-~-~~~~~~~~ 394 (502)
T Consensus 232 ~p~~f~~~~~~~~~~l~~~I~~Ar~~L~~V~v~~~~~~~i~~~~~~~~v~g~RA~I~l~raARA~AAL~GR~~V~~eDv~ 311 (347)
T CHL00081 232 NPENFREKYSESQDALKTQIILARQLLPNVEIDYDLRVKISQICSELDVDGLRGDIVTNRAAKALAAFNGRDEVTPGDIE 311 (347)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 96999999887899999999999864477355999999999999984899871899999999999998699836899999
Q ss_pred HHHHHHHCCCCCCC-----CCHHHHHHHHHHHHCCC
Q ss_conf 99987630378875-----79899999999980999
Q gi|254780627|r 395 ELLSHLVNTGETKK-----MRIEDIQRMVAKHYNIS 425 (502)
Q Consensus 395 ~~l~~~~~~~~~~~-----i~~~~I~~~V~~~~~i~ 425 (502)
T Consensus 312 ~aa~lVL~HRlrr~P~e~~~s~~r~~~~~~~~~~~~ 347 (347)
T CHL00081 312 KVITLCLRHRLRKDPLESIDSGLKVQKVFQKIFGLK 347 (347)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 999984201057996200165206999999984889