HHsearch alignment for GI: 254780627 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=98.70 E-value=1.7e-06 Score=66.25 Aligned_cols=162 Identities=21% Similarity=0.314 Sum_probs=103.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHH-HCCHHHHHHHHHHCCCC--
Q ss_conf 898627888857999999999986306881686469888999999986198899999974-03102054444531750--
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLR-NIDLLLIDDMQFLQGKL-- 275 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r-~~DvLliDDiqfl~gk~-- 275 (502)
T Consensus 279 iLl~GpPGtGKT~lAkava~~~-----~~~fi~v~~~~l~sk~vGesek~ir~~F~~A~~~~p~iifiDEiDs~~~~r~~ 353 (494)
T COG0464 279 VLLYGPPGTGKTLLAKAVALES-----RSRFISVKGSELLSKWVGESEKNIRELFEKARKLAPSIIFIDEIDSLASGRGP 353 (494)
T ss_pred EEEECCCCCCHHHHHHHHHHHC-----CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
T ss_conf 9998899975899999987544-----98248843355540776599999999999999669988974886667412899
Q ss_pred --------HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHH--HHHHCCEEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf --------69999999999885698799964875676136303457--65302115775158889999999999988643
Q gi|254780627|r 276 --------IQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIR--SRLQGGVSVPLGLHDYEMRFSILKNRLAISQK 345 (502)
Q Consensus 276 --------tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~--SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~ 345 (502)
T Consensus 354 ~~~~~~~rv~~~ll~~~d~~e~~~~v~vi~aTN~p~~ld---~a~lR~gRfd~--~i~v~~pd~~~r~~i~~~~~~---- 424 (494)
T COG0464 354 SEDGSGRRVVGQLLTELDGIEKAEGVLVIAATNRPDDLD---PALLRPGRFDR--LIYVPLPDLEERLEIFKIHLR---- 424 (494)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC---HHHHCCCCCEE--EEEECCCCHHHHHHHHHHHHC----
T ss_conf 876379999999999974754437648996479833268---75624366303--787179898999999999854----
Q ss_pred HCCCCC-CCHHHHHHHHHHCCC-CHHHHHHHH
Q ss_conf 116897-898999999850278-889999999
Q gi|254780627|r 346 EDPKLN-INEEVLMHVARTVTT-SGRELDGAF 375 (502)
Q Consensus 346 ~~~~~~-l~~~v~~~la~~~~~-~vR~Legal 375 (502)
T Consensus 425 -~~~~~~~~~~~~~~l~~~t~~~sgadi~~i~ 455 (494)
T COG0464 425 -DKKPPLAEDVDLEELAEITEGYSGADIAALV 455 (494)
T ss_pred -CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf -1565115564199999875277899999999