HHsearch alignment for GI: 254780627 and conserved domain: COG3284

>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=95.16  E-value=0.32  Score=28.74  Aligned_cols=253  Identities=19%  Similarity=0.240  Sum_probs=140.7

Q ss_pred             HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH-
Q ss_conf             3288614789999999982410013655555489862788885799999999998630688168646988899999998-
Q gi|254780627|r  167 FIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAI-  245 (502)
Q Consensus       167 FVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~-  245 (502)
T Consensus       316 ~~~d~s~a~l~rk~~rv~~~~---------~pvll~GEtGtGKe~laraiH~~s~~~gp---fvAvNCaAip~~liesEL  383 (606)
T COG3284         316 PLLDPSRATLLRKAERVAATD---------LPVLLQGETGTGKEVLARAIHQNSEAAGP---FVAVNCAAIPEALIESEL  383 (606)
T ss_pred             CCCCHHHHHHHHHHHHHHHCC---------CCEEECCCCCHHHHHHHHHHHHCCCCCCC---EEEEEECCCHHHHHHHHH
T ss_conf             455788999999998876247---------87685387655689999999853655698---379985034477646777


Q ss_pred             ---HCCCHH-HHHHHHH----HCC--HHHHHHHHHHCCCCHHHHHHHHHHHH---------HHCCCEEEEECCCCHHHH-
Q ss_conf             ---619889-9999974----031--02054444531750699999999998---------856987999648756761-
Q gi|254780627|r  246 ---RDNCAL-NLKDSLR----NID--LLLIDDMQFLQGKLIQHEFCHLLNSL---------LDSAKQVVAAADRPPSEL-  305 (502)
Q Consensus       246 ---~~~~~~-~fr~~~r----~~D--vLliDDiqfl~gk~tqee~f~~~n~l---------~~~gkqiv~tsd~~P~~l-  305 (502)
T Consensus       384 FGy~~GafTga~~kG~~g~~~~A~gGtlFldeIgd~p-~~~Qs~LLrVl~e~~v~p~g~~~~~vdirvi~ath~dl~~lv  462 (606)
T COG3284         384 FGYVAGAFTGARRKGYKGKLEQADGGTLFLDEIGDMP-LALQSRLLRVLQEGVVTPLGGTRIKVDIRVIAATHRDLAQLV  462 (606)
T ss_pred             HCCCCCCCCCCHHCCCCCCCEECCCCCCHHHHHHHCH-HHHHHHHHHHHHHCCEECCCCCCEEEEEEEEECCCCCHHHHH
T ss_conf             4457656433001066554101578760898761141-899999999986182523588521577999834675799998


Q ss_pred             --CCCCHHHHHHHHCCEEEEECCCCHHH---HHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHCCCCHHHHHHHHHHHH
Q ss_conf             --36303457653021157751588899---999999999886431168978989999-998502788899999999999
Q gi|254780627|r  306 --ESLDPRIRSRLQGGVSVPLGLHDYEM---RFSILKNRLAISQKEDPKLNINEEVLM-HVARTVTTSGRELDGAFNQLV  379 (502)
Q Consensus       306 --~~l~~rL~SR~~~Gl~~~i~~Pd~e~---r~~Il~~k~~~~~~~~~~~~l~~~v~~-~la~~~~~~vR~Legal~~l~  379 (502)
T Consensus       463 ~~g~fredLyyrL~-~~~i~l--P~lr~R~d~~~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~WPGNirel~~v~~~~~  537 (606)
T COG3284         463 EQGRFREDLYYRLN-AFVITL--PPLRERSDRIPLLDRILKREND--WRLQLDDDALARLLAYRWPGNIRELDNVIERLA  537 (606)
T ss_pred             HCCCCHHHHHHHHC-CEEECC--CCHHCCCCCHHHHHHHHHHCCC--CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             75971487888744-715506--8611046657899999987268--775689999999985789982899999999998


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCHHH
Q ss_conf             98630246877889999987630378875798999999999809999994088877401445799999999851568789
Q gi|254780627|r  380 FRHSFAPILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSNRRVRTVVRPRQVAMYLSKIMTPRSFPE  459 (502)
Q Consensus       380 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~i~~~~l~s~~R~~~i~~~RqiamyL~r~~t~~s~~~  459 (502)
T Consensus       538 ~l~~~g~~~~~dlp~~l~~~~~--------~~--------------------------~~~~~~~~l~~al~~~~~~is~  583 (606)
T COG3284         538 ALSDGGRIRVSDLPPELLEEQA--------TP--------------------------REDIEKAALLAALQATNGNISE  583 (606)
T ss_pred             HCCCCCEEECCCCCHHHHHHHC--------CC--------------------------CCCHHHHHHHHHHHHCCCCHHH
T ss_conf             7079973571449888875432--------53--------------------------0015799999999980897999


Q ss_pred             HHHHHCCCCHHHH
Q ss_conf             9988479843799
Q gi|254780627|r  460 IGRRFGDRDHTTV  472 (502)
Q Consensus       460 IG~~fg~rdHsTV  472 (502)
T Consensus       584 aa~~lg-i~R~T~  595 (606)
T COG3284         584 AARLLG-ISRSTL  595 (606)
T ss_pred             HHHHHC-CCHHHH
T ss_conf             999859-978889