HHsearch alignment for GI: 254780627 and conserved domain: COG3284
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=95.16 E-value=0.32 Score=28.74 Aligned_cols=253 Identities=19% Similarity=0.240 Sum_probs=140.7
Q ss_pred HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH-
Q ss_conf 3288614789999999982410013655555489862788885799999999998630688168646988899999998-
Q gi|254780627|r 167 FIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAI- 245 (502)
Q Consensus 167 FVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~- 245 (502)
T Consensus 316 ~~~d~s~a~l~rk~~rv~~~~---------~pvll~GEtGtGKe~laraiH~~s~~~gp---fvAvNCaAip~~liesEL 383 (606)
T COG3284 316 PLLDPSRATLLRKAERVAATD---------LPVLLQGETGTGKEVLARAIHQNSEAAGP---FVAVNCAAIPEALIESEL 383 (606)
T ss_pred CCCCHHHHHHHHHHHHHHHCC---------CCEEECCCCCHHHHHHHHHHHHCCCCCCC---EEEEEECCCHHHHHHHHH
T ss_conf 455788999999998876247---------87685387655689999999853655698---379985034477646777
Q ss_pred ---HCCCHH-HHHHHHH----HCC--HHHHHHHHHHCCCCHHHHHHHHHHHH---------HHCCCEEEEECCCCHHHH-
Q ss_conf ---619889-9999974----031--02054444531750699999999998---------856987999648756761-
Q gi|254780627|r 246 ---RDNCAL-NLKDSLR----NID--LLLIDDMQFLQGKLIQHEFCHLLNSL---------LDSAKQVVAAADRPPSEL- 305 (502)
Q Consensus 246 ---~~~~~~-~fr~~~r----~~D--vLliDDiqfl~gk~tqee~f~~~n~l---------~~~gkqiv~tsd~~P~~l- 305 (502)
T Consensus 384 FGy~~GafTga~~kG~~g~~~~A~gGtlFldeIgd~p-~~~Qs~LLrVl~e~~v~p~g~~~~~vdirvi~ath~dl~~lv 462 (606)
T COG3284 384 FGYVAGAFTGARRKGYKGKLEQADGGTLFLDEIGDMP-LALQSRLLRVLQEGVVTPLGGTRIKVDIRVIAATHRDLAQLV 462 (606)
T ss_pred HCCCCCCCCCCHHCCCCCCCEECCCCCCHHHHHHHCH-HHHHHHHHHHHHHCCEECCCCCCEEEEEEEEECCCCCHHHHH
T ss_conf 4457656433001066554101578760898761141-899999999986182523588521577999834675799998
Q ss_pred --CCCCHHHHHHHHCCEEEEECCCCHHH---HHHHHHHHHHHHHHHCCCCCCCHHHHH-HHHHHCCCCHHHHHHHHHHHH
Q ss_conf --36303457653021157751588899---999999999886431168978989999-998502788899999999999
Q gi|254780627|r 306 --ESLDPRIRSRLQGGVSVPLGLHDYEM---RFSILKNRLAISQKEDPKLNINEEVLM-HVARTVTTSGRELDGAFNQLV 379 (502)
Q Consensus 306 --~~l~~rL~SR~~~Gl~~~i~~Pd~e~---r~~Il~~k~~~~~~~~~~~~l~~~v~~-~la~~~~~~vR~Legal~~l~ 379 (502)
T Consensus 463 ~~g~fredLyyrL~-~~~i~l--P~lr~R~d~~~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~WPGNirel~~v~~~~~ 537 (606)
T COG3284 463 EQGRFREDLYYRLN-AFVITL--PPLRERSDRIPLLDRILKREND--WRLQLDDDALARLLAYRWPGNIRELDNVIERLA 537 (606)
T ss_pred HCCCCHHHHHHHHC-CEEECC--CCHHCCCCCHHHHHHHHHHCCC--CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 75971487888744-715506--8611046657899999987268--775689999999985789982899999999998
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCHHH
Q ss_conf 98630246877889999987630378875798999999999809999994088877401445799999999851568789
Q gi|254780627|r 380 FRHSFAPILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSNRRVRTVVRPRQVAMYLSKIMTPRSFPE 459 (502)
Q Consensus 380 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~i~~~~l~s~~R~~~i~~~RqiamyL~r~~t~~s~~~ 459 (502)
T Consensus 538 ~l~~~g~~~~~dlp~~l~~~~~--------~~--------------------------~~~~~~~~l~~al~~~~~~is~ 583 (606)
T COG3284 538 ALSDGGRIRVSDLPPELLEEQA--------TP--------------------------REDIEKAALLAALQATNGNISE 583 (606)
T ss_pred HCCCCCEEECCCCCHHHHHHHC--------CC--------------------------CCCHHHHHHHHHHHHCCCCHHH
T ss_conf 7079973571449888875432--------53--------------------------0015799999999980897999
Q ss_pred HHHHHCCCCHHHH
Q ss_conf 9988479843799
Q gi|254780627|r 460 IGRRFGDRDHTTV 472 (502)
Q Consensus 460 IG~~fg~rdHsTV 472 (502)
T Consensus 584 aa~~lg-i~R~T~ 595 (606)
T COG3284 584 AARLLG-ISRSTL 595 (606)
T ss_pred HHHHHC-CCHHHH
T ss_conf 999859-978889