HHsearch alignment for GI: 254780627 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=97.91 E-value=0.00068 Score=47.68 Aligned_cols=185 Identities=20% Similarity=0.209 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHCCCCCCC----CCCCC--EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCC
Q ss_conf 899999999824100136----55555--489862788885799999999998630688168646988899999998619
Q gi|254780627|r 175 VALTAAQSIAEVDSHGYT----TVRLN--PLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDN 248 (502)
Q Consensus 175 lA~aAAkaVAe~pg~~~~----~~~~N--PLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~ 248 (502)
T Consensus 674 ~~k~~l~~~i~~P~kyp~if~~~plr~~~giLLyGppGcGKT~la~a~a~~-----~~~~fisvKGPElL~KyIGaSEq~ 748 (952)
T KOG0735 674 EAKKVLEEVIEWPSKYPQIFANCPLRLRTGILLYGPPGCGKTLLASAIASN-----SNLRFISVKGPELLSKYIGASEQN 748 (952)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH-----CCEEEEEECCHHHHHHHHCCCHHH
T ss_conf 999999999855410367886088666554588779998578888888853-----780599825889999874500788
Q ss_pred CHHHHHHHHHH--CCHHHHHHHHHHCCCC-------H---HHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHH--H
Q ss_conf 88999999740--3102054444531750-------6---9999999999885698799964875676136303457--6
Q gi|254780627|r 249 CALNLKDSLRN--IDLLLIDDMQFLQGKL-------I---QHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIR--S 314 (502)
Q Consensus 249 ~~~~fr~~~r~--~DvLliDDiqfl~gk~-------t---qee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~--S 314 (502)
T Consensus 749 vR~lF-~rA~~a~PCiLFFDEfdSiAPkRGhDsTGVTDRVVNQlLTelDG~Egl~GV~i~aaTsRpdliD---pALLRpG 824 (952)
T KOG0735 749 VRDLF-ERAQSAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTELDGAEGLDGVYILAATSRPDLID---PALLRPG 824 (952)
T ss_pred HHHHH-HHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC---HHHCCCC
T ss_conf 99999-9865149748971210243766687777742999999987603633445389997337834367---7662887
Q ss_pred HHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHCCC-CHHHHHHHHHH
Q ss_conf 53021157751588899999999999886431168978989-99999850278-88999999999
Q gi|254780627|r 315 RLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEE-VLMHVARTVTT-SGRELDGAFNQ 377 (502)
Q Consensus 315 R~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~-v~~~la~~~~~-~vR~Legal~~ 377 (502)
T Consensus 825 RlD~~v--~C~~P~~~eRl~il~~l-s------~s~~~~~~vdl~~~a~~T~g~tgADlq~ll~~ 880 (952)
T KOG0735 825 RLDKLV--YCPLPDEPERLEILQVL-S------NSLLKDTDVDLECLAQKTDGFTGADLQSLLYN 880 (952)
T ss_pred CCCEEE--ECCCCCCHHHHHHHHHH-H------HCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 654015--67998928999999998-5------34577521016887652178736659989877