HHsearch alignment for GI: 254780627 and conserved domain: KOG1942

Probab=94.95  E-value=0.34  Score=28.49  Aligned_cols=126  Identities=24%  Similarity=0.229  Sum_probs=76.1

Q ss_pred             CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-C-CEEEEECCCCHHHHCC---------CCHHHHHHHHCCEEEEECCCC
Q ss_conf             3102054444531750699999999998856-9-8799964875676136---------303457653021157751588
Q gi|254780627|r  260 IDLLLIDDMQFLQGKLIQHEFCHLLNSLLDS-A-KQVVAAADRPPSELES---------LDPRIRSRLQGGVSVPLGLHD  328 (502)
Q Consensus       260 ~DvLliDDiqfl~gk~tqee~f~~~n~l~~~-g-kqiv~tsd~~P~~l~~---------l~~rL~SR~~~Gl~~~i~~Pd  328 (502)
T Consensus       297 PGVLFIDEVhMLD-----iEcFTyL~kalES~iaPivifAsNrG~~~irGt~d~~sPhGip~dllDRl---~Iirt~~y~  368 (456)
T KOG1942         297 PGVLFIDEVHMLD-----IECFTYLHKALESPIAPIVIFASNRGMCTIRGTEDILSPHGIPPDLLDRL---LIIRTLPYD  368 (456)
T ss_pred             CCCEEEEEHHHHH-----HHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHE---EEEEECCCC
T ss_conf             7626863013242-----69999999986277875699962776102217767878788997786126---678603699


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHH-CC-CCCHHHHHHHHH
Q ss_conf             8999999999998864311689789899999985027-8889999999999998630-24-687788999998
Q gi|254780627|r  329 YEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVT-TSGRELDGAFNQLVFRHSF-AP-ILTAEIADELLS  398 (502)
Q Consensus       329 ~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~-~~vR~Legal~~l~~~~~~-~~-~~~~~~~~~~l~  398 (502)
T Consensus       369 ~~e~r~Ii~~R-----a~~E~l~~~e~a~~~l~~~gt~tsLRy~vqLl~p~~~~ak~~g~~~i~v~dvee~~~  436 (456)
T KOG1942         369 EEEIRQIIKIR-----AQVEGLQVEEEALDLLAEIGTSTSLRYAVQLLTPASILAKTNGRKEISVEDVEEVTE  436 (456)
T ss_pred             HHHHHHHHHHH-----HHHHCCEECHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCEEECCCHHHHHH
T ss_conf             89999999998-----765142322889999876054145788988537888999871985343124899999