HHsearch alignment for GI: 254780627 and conserved domain: PRK00091
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.
Probab=91.98 E-value=0.18 Score=30.43 Aligned_cols=120 Identities=14% Similarity=0.105 Sum_probs=53.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH---HCCCC
Q ss_conf 898627888857999999999986306881686469888999999986198899999974031020544445---31750
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQF---LQGKL 275 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqf---l~gk~ 275 (502)
T Consensus 7 i~i~GpTasGKs~la~~la~~~-----~~eIIsaDS~QvYk~l~IgT-akps~~e~~~---i~Hhli~~~~~~e~~sv~~ 77 (304)
T PRK00091 7 IVLVGPTASGKTALAIELAKRL-----NGEIISVDSMQVYRGMDIGT-AKPTAEELAG---VPHHLIDILDPTESYSAAD 77 (304)
T ss_pred EEEECCCCCCHHHHHHHHHHHC-----CCEEEEECHHHHHCCCCEEE-CCCCHHHHCC---CCCEEEEEECCCCCEEHHH
T ss_conf 9998988658999999999987-----99899412688749998688-9999999818---9812434565887544999
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHH
Q ss_conf 69999999999885698799964875676136303457653021157751588899999999
Q gi|254780627|r 276 IQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILK 337 (502)
Q Consensus 276 tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~ 337 (502)
T Consensus 78 f~~~a~~~i~~i~~~~kiPIiVGGTgl-Yl~a----Ll----~g~~-~~p~~~~~ir~~l~~ 129 (304)
T PRK00091 78 FQRDALAAIEDITARGKLPILVGGTGL-YFKA----LL----EGLS-FLPPADPEVRAELEA 129 (304)
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCHH-HHHH----HH----CCCC-CCCCCCHHHHHHHHH
T ss_conf 999999999999976998789808389-9999----97----1877-788889899999999