HHsearch alignment for GI: 254780627 and conserved domain: PRK04841
>PRK04841 transcriptional regulator MalT; Provisional.
Probab=97.56 E-value=0.0017 Score=44.88 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=27.7
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999985156878999884798437999999999999861
Q gi|254780627|r 443 QVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLET 485 (502)
Q Consensus 443 qiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~ 485 (502)
T Consensus 845 eVL~lLa~---GlSNkeIA~~L~-IS~~TVK~HlrnIy~KLgV 883 (903)
T PRK04841 845 QVLGLIYS---GYSNEQIAGELD-VAATTIKTHIRNLYQKLGI 883 (903)
T ss_pred HHHHHHHC---CCCHHHHHHHHC-CCHHHHHHHHHHHHHHCCC
T ss_conf 99999976---899999998819-9876999999999856599