HHsearch alignment for GI: 254780627 and conserved domain: PRK05636

>PRK05636 replicative DNA helicase; Provisional.
Probab=94.19  E-value=0.53  Score=27.15  Aligned_cols=100  Identities=16%  Similarity=0.253  Sum_probs=56.5

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE----EHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf             8986278888579999999999863068816864----698889999999861988999999740310205444453175
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYL----TAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK  274 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~----~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk  274 (502)
T Consensus       270 iIiAARPsmGKTalAlnia~n~A~~~-g~~v~~fSLEMs~~ql~~Rlla~~s~V~~~~ir-----------------~g~  331 (507)
T PRK05636        270 IIVAARPGVGKSTIALDFMRSASIKN-NKASVIFSLEMSKSEIVMRLLSAEAEVRLADMR-----------------GGK  331 (507)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHH-----------------CCC
T ss_conf             99973787866899999999999876-993799715699899999999984798878885-----------------588


Q ss_pred             CHHHH---HHHHHHHHHHCCCEEEEECCC---CHHHHCCCCHHHHHHHHCC
Q ss_conf             06999---999999988569879996487---5676136303457653021
Q gi|254780627|r  275 LIQHE---FCHLLNSLLDSAKQVVAAADR---PPSELESLDPRIRSRLQGG  319 (502)
Q Consensus       275 ~tqee---~f~~~n~l~~~gkqiv~tsd~---~P~~l~~l~~rL~SR~~~G  319 (502)
T Consensus       332 l~~~~~~~l~~a~~~l~~~p---l~IdD~~~lti~~Ira~aRrlk~~~~l~  379 (507)
T PRK05636        332 MDEDAWEKLVQRLGKIAQAP---IFIDDSANLTMMEIRSKARRLKQKHDLK  379 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHCC---EEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             78899999999999986198---8998499976999999999998617999