HHsearch alignment for GI: 254780627 and conserved domain: PRK05818

>PRK05818 DNA polymerase III subunit delta'; Validated.
Probab=94.45  E-value=0.47  Score=27.52  Aligned_cols=179  Identities=12%  Similarity=0.093  Sum_probs=92.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHH-------------------HCCCCCEEEEEHHHHHHHHHHHHHCCCH----HHH
Q ss_conf             54898627888857999999999986-------------------3068816864698889999999861988----999
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIK-------------------RQPNLRVVYLTAEYFMWRFASAIRDNCA----LNL  253 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~-------------------~~~~~~v~y~~~e~F~~~~~~a~~~~~~----~~f  253 (502)
T Consensus         9 halLl~~~~G~~~~~~~~~~~k~LlC~~~~~PCG~C~sC~~i~~g~HPD~--~~i~pe~------~sIkieqir~li~~l   80 (262)
T PRK05818          9 HPLLLIERKGSFLKPFLYEYLTSIVCTKANGFCKTCESCLKILNGKYNDF--YLIFDQK------NPIKKEDALSIINKL   80 (262)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCE--EEEECCC------CCCCHHHHHHHHHHH
T ss_conf             50566448776469999999998622899999988862786755899977--9971664------557798999999998


Q ss_pred             HHHH-H--HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHH
Q ss_conf             9997-4--031020544445317506999999999988569879996487567613630345765302115775158889
Q gi|254780627|r  254 KDSL-R--NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYE  330 (502)
Q Consensus       254 r~~~-r--~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e  330 (502)
T Consensus        81 ~~~s~e~~g~KV~II~~Ae~Mt-~~AANALLKtLEEP-p~nt~fIL~t~~~~----~LLPTIrSRC~~~~~~~~---~~~  151 (262)
T PRK05818         81 NRPSVESNGKKIYIIYGIEKLN-KQSANSLLKLIEEP-PKNTYGIFTTRNEN----NILNTILSRCVQYVVLSK---EKK  151 (262)
T ss_pred             HHCCCCCCCCEEEEECCHHHHC-HHHHHHHHHHHCCC-CCCEEEEEEECCHH----HCCCHHHHHCCCCCCCCH---HHH
T ss_conf             2114002884899987778749-99999999861289-87838999738814----373088877014466643---466


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             9999999999886431168978989999998502-78889999999999998630246877889999987
Q gi|254780627|r  331 MRFSILKNRLAISQKEDPKLNINEEVLMHVARTV-TTSGRELDGAFNQLVFRHSFAPILTAEIADELLSH  399 (502)
Q Consensus       331 ~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~-~~~vR~Legal~~l~~~~~~~~~~~~~~~~~~l~~  399 (502)
T Consensus       152 ~~~~~~~~~~-----~~~~i~~~~~s~de~~~~~~~gs~~~~l~il~~~i~~~--n~~~~~~~~~~l~~~  214 (262)
T PRK05818        152 VPFKVESNDR-----YFQYILLSFYSVDEQLQAYNNGSFSKLKNIIETLINKK--NKLIQIHKAWILFKT  214 (262)
T ss_pred             HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCEEHHHHHHHHHC
T ss_conf             7888874088-----89876410110799998861676888999999998756--884339999999831