HHsearch alignment for GI: 254780627 and conserved domain: PRK06090

>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=96.56  E-value=0.017  Score=37.80  Aligned_cols=132  Identities=17%  Similarity=0.182  Sum_probs=79.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC------------------EEEEEHHHHHHH-HHHHHHCCCHHHHH---
Q ss_conf             54898627888857999999999986306881------------------686469888999-99998619889999---
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIKRQPNLR------------------VVYLTAEYFMWR-FASAIRDNCALNLK---  254 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~------------------v~y~~~e~F~~~-~~~a~~~~~~~~fr---  254 (502)
T Consensus        26 HA~L~~g~~G~Gk~~la~~la~~LlC~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~pe~~~k~I~vd~IR~--l~~~~~~~  103 (319)
T PRK06090         26 GALLLQSDEGLGVESLVELFSHALLCQNYQSEACGFCHSCELMKSGNHPDLHVIKPEKEGKSITVEQIRQ--CNRLAQES  103 (319)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH--HHHHHHHC
T ss_conf             0676679998579999999999980899999988778779998758999823661233567687999999--99997545


Q ss_pred             HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf             99740310205444453175069999999999885698799964875676136303457653021157751588899999
Q gi|254780627|r  255 DSLRNIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFS  334 (502)
Q Consensus       255 ~~~r~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~  334 (502)
T Consensus       104 ~~~g~~KV~iI~~ae~m~-~~AaNALLKtLEE-Pp~~t~fiL~t~~~~----~ll~TI~SRCq---~~~l~~p~~~~~~~  174 (319)
T PRK06090        104 SQLGGYRLFVIEPADAMN-ESASNALLKTLEE-PAPNCLFLLVTHNQK----RLLPTIVSRCQ---QWVVTPPSTDQAMQ  174 (319)
T ss_pred             CCCCCCEEEEECCHHHCC-HHHHHHHHHHHCC-CCCCEEEEEEECCHH----HCCCCHHHCCC---CCCCCCCCHHHHHH
T ss_conf             210693699981444349-9999999998428-998838998768512----08641876144---50289959999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780627|r  335 ILKNR  339 (502)
Q Consensus       335 Il~~k  339 (502)
T Consensus       175 WL~~q  179 (319)
T PRK06090        175 WLKGQ  179 (319)
T ss_pred             HHHHH
T ss_conf             99884