HHsearch alignment for GI: 254780627 and conserved domain: PRK06305

>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.81  E-value=3e-07  Score=71.50  Aligned_cols=211  Identities=17%  Similarity=0.185  Sum_probs=129.7

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC----EEEEEHHHHH
Q ss_conf             887632886147899999999824100136555554898627888857999999999986306881----6864698889
Q gi|254780627|r  163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLR----VVYLTAEYFM  238 (502)
Q Consensus       163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~----v~y~~~e~F~  238 (502)
T Consensus        15 ~F~dvV-GQ~~vv-~~L~nai~~--~ri~-----HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I~   85 (462)
T PRK06305         15 TFSEIL-GQDAVV-TVLKNALRF--NRAA-----HAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEIS   85 (462)
T ss_pred             CHHHHC-CCHHHH-HHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             876604-909999-999999984--9976-----2343038998599999999999967999988889887668889986


Q ss_pred             HH------HHHHHHCCCHHHHHH---H--HH----HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHH
Q ss_conf             99------999986198899999---9--74----031020544445317506999999999988569879996487567
Q gi|254780627|r  239 WR------FASAIRDNCALNLKD---S--LR----NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPS  303 (502)
Q Consensus       239 ~~------~~~a~~~~~~~~fr~---~--~r----~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~  303 (502)
T Consensus        86 ~g~~~DViEiDaAs~~gVddIRel~e~v~~~P~~~~yKVyIIDEvhmLs-~~AfNALLKtLEEPP~~v~FILaTTe--~~  162 (462)
T PRK06305         86 SGTSLDVIEIDGASHRGIEDIRQINETVLFTPSKSQYKIYIIDEVHMLT-KEAFNSLLKTLEEPPQHVKFFLATTE--IH  162 (462)
T ss_pred             CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCC-HHHHHHHHHHHHCCCCCEEEEEEECC--HH
T ss_conf             3899986864355344668999999771008867750599981521179-99999999986189877499998188--14


Q ss_pred             HHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             61363034576530211577515888999999999998864311689789899999985027888999999999999863
Q gi|254780627|r  304 ELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHS  383 (502)
Q Consensus       304 ~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~  383 (502)
T Consensus       163 ---KIp~TIlSRCQ---rf~F~~i~~~~I~~~L~~I-----~~~E~i~~e~~AL~lIA~~a~GsmRDAlslLDQ~i~~~-  230 (462)
T PRK06305        163 ---KIPGTILSRCQ---KMHLKRIPEETIIDKLALI-----AQQDGIETSREALLPIARAAQGSLRDAESLYDYVVGLF-  230 (462)
T ss_pred             ---HCCHHHHHHHH---EEECCCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-
T ss_conf             ---28547876540---2332579999999999999-----99839985999999999985895878999999999847-


Q ss_pred             HCCCCCHHHHHHHHH
Q ss_conf             024687788999998
Q gi|254780627|r  384 FAPILTAEIADELLS  398 (502)
Q Consensus       384 ~~~~~~~~~~~~~l~  398 (502)
T Consensus       231 -~~~it~~~V~~~lG  244 (462)
T PRK06305        231 -PKSLSPDTVAKALG  244 (462)
T ss_pred             -CCCCCHHHHHHHHC
T ss_conf             -99868999999868