HHsearch alignment for GI: 254780627 and conserved domain: PRK06315
>PRK06315 type III secretion system ATPase; Provisional.
Probab=91.30 E-value=0.28 Score=29.10 Aligned_cols=37 Identities=32% Similarity=0.412 Sum_probs=27.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
Q ss_conf 898627888857999999999986306881686469888
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYF 237 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F 237 (502)
T Consensus 167 ~gIfagsGvGKs~Ll~~i~~~~~~--adv~V~~lIGeRg 203 (442)
T PRK06315 167 IGIFAGAGVGKSSLLGMIARNAEE--ADVNVIALIGERG 203 (442)
T ss_pred EECCCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECCCC
T ss_conf 640389999888999999974403--8934999955113