HHsearch alignment for GI: 254780627 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.76 E-value=1.4e-06 Score=66.82 Aligned_cols=213 Identities=16% Similarity=0.199 Sum_probs=133.4
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH-----CCCCCE--EEEEHH
Q ss_conf 8876328861478999999998241001365555548986278888579999999999863-----068816--864698
Q gi|254780627|r 163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKR-----QPNLRV--VYLTAE 235 (502)
Q Consensus 163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~-----~~~~~v--~y~~~e 235 (502)
T Consensus 19 ~f~~li-GQ~-~~~~~l~n~i~~--~~~~-----~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~ 89 (507)
T PRK06645 19 NFAELQ-GQE-VLVKVLSYTILN--DRLA-----GGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCI 89 (507)
T ss_pred CHHHHC-CCH-HHHHHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 765623-939-999999999973--9966-----3477458799788999999999967999888899888888876789
Q ss_pred HHHHH----H--HHHHHCCCHHHHHHH-----HH----HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 88999----9--999861988999999-----74----031020544445317506999999999988569879996487
Q gi|254780627|r 236 YFMWR----F--ASAIRDNCALNLKDS-----LR----NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADR 300 (502)
Q Consensus 236 ~F~~~----~--~~a~~~~~~~~fr~~-----~r----~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~ 300 (502)
T Consensus 90 ~i~~~~~~dv~EiDaas~~gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls-~~a~nallktlEepp~~~~Fi~atte- 167 (507)
T PRK06645 90 SFNNHNHPDIIEIDAASKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLS-KGAFNALLKTLEEPPPHIIFIFATTE- 167 (507)
T ss_pred HHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCC-HHHHHHHHHHHHCCCCCEEEEEECCC-
T ss_conf 9865899985996378888889999998635517876743589952142248-99999999974278644389997485-
Q ss_pred CHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 56761363034576530211577515888999999999998864311689789899999985027888999999999999
Q gi|254780627|r 301 PPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVF 380 (502)
Q Consensus 301 ~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~ 380 (502)
T Consensus 168 -~~---kip~ti~srcq~---f~~~~i~~~~i~~~l~~i-----~~~E~~~~~~~al~~ia~~a~Gs~RDalslldqai~ 235 (507)
T PRK06645 168 -VQ---KIPATIISRCQR---YDLRRLSFEEIFKLLEYI-----TKQENLKADIEALRIIAYKSEGSARDAVSILDQAAS 235 (507)
T ss_pred -HH---HCCHHHHHHCEE---EEEECCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf -36---483788854327---875459979999999999-----997687777899999998559986789999999999
Q ss_pred HHHH-CCCCCHHHHHHHHH
Q ss_conf 8630-24687788999998
Q gi|254780627|r 381 RHSF-APILTAEIADELLS 398 (502)
Q Consensus 381 ~~~~-~~~~~~~~~~~~l~ 398 (502)
T Consensus 236 ~~~~~~~~I~~~~V~~MLG 254 (507)
T PRK06645 236 MSAKSDNIISPQVINQMLG 254 (507)
T ss_pred HHCCCCCCCCHHHHHHHHC
T ss_conf 7548987026999999838