HHsearch alignment for GI: 254780627 and conserved domain: PRK06647

>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.83  E-value=1.3e-06  Score=66.91  Aligned_cols=211  Identities=16%  Similarity=0.164  Sum_probs=130.1

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCC--EEEEEHHHHHH
Q ss_conf             887632886147899999999824100136555554898627888857999999999986306-881--68646988899
Q gi|254780627|r  163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQP-NLR--VVYLTAEYFMW  239 (502)
Q Consensus       163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~-~~~--v~y~~~e~F~~  239 (502)
T Consensus        14 ~F~dvv-GQe~--vv~~L~nai~~-~rl~-----HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~i~~   84 (560)
T PRK06647         14 DFNSLE-GQDF--VVETLKHSIEK-NKIA-----NAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKSIDN   84 (560)
T ss_pred             CHHHHC-CCHH--HHHHHHHHHHC-CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             654403-9499--99999999974-9977-----4366328998789999999999965999999888878878888745


Q ss_pred             H------HHHHHHCCCHHHHHH---HHH------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHH
Q ss_conf             9------999986198899999---974------0310205444453175069999999999885698799964875676
Q gi|254780627|r  240 R------FASAIRDNCALNLKD---SLR------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSE  304 (502)
Q Consensus       240 ~------~~~a~~~~~~~~fr~---~~r------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~  304 (502)
T Consensus        85 g~~~DviEidaasn~~VddIR~l~e~v~~~P~~~~yKV~IIDEahmLt-~~A~NALLKtLEEPP~~~~FILaTte--~~-  160 (560)
T PRK06647         85 DSSLDVIEIDGASNTSVQDVRQIKEEIMFPPASSRYRVYIIDEVHMLS-NSAFNALLKTIEEPPPYIVFIFATTE--VH-  160 (560)
T ss_pred             CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCC-HHHHHHHHHHHHCCCCCEEEEEECCC--HH-
T ss_conf             999875764364548889999999986328766870699964656559-99999999986348875599997799--47-


Q ss_pred             HCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             13630345765302115775158889999999999988643116897898999999850278889999999999998630
Q gi|254780627|r  305 LESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSF  384 (502)
Q Consensus       305 l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~  384 (502)
T Consensus       161 --KI~~TI~SRCQ---~f~Fk~i~~~~I~~~L~~I-----~~~E~i~~e~~AL~lIa~~a~Gs~RDalslldq~i~~~--  228 (560)
T PRK06647        161 --KLPATIKSRCQ---HFNFRLLSLEKIYEMLKKV-----CLEDDIKYEDEALKWIAYKSGGSVRDAYTLFDQIVSFS--  228 (560)
T ss_pred             --HCHHHHHHHHE---EEECCCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--
T ss_conf             --68489996510---4105559999999999999-----98679887999999999977895888999999999607--


Q ss_pred             CCCCCHHHHHHHHH
Q ss_conf             24687788999998
Q gi|254780627|r  385 APILTAEIADELLS  398 (502)
Q Consensus       385 ~~~~~~~~~~~~l~  398 (502)
T Consensus       229 ~~~i~~~~v~~~lG  242 (560)
T PRK06647        229 NSDITLEQIRSKMG  242 (560)
T ss_pred             CCCCCHHHHHHHHC
T ss_conf             99778999999868