HHsearch alignment for GI: 254780627 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.74 E-value=6.2e-07 Score=69.29 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=122.8
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC-CCE--EEEEHHHHHH
Q ss_conf 8876328861478999999998241001365555548986278888579999999999863068-816--8646988899
Q gi|254780627|r 163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPN-LRV--VYLTAEYFMW 239 (502)
Q Consensus 163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~-~~v--~y~~~e~F~~ 239 (502)
T Consensus 14 ~F~dvv-GQ~-~v~~~L~nai~~--~ri~-----HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~ 84 (563)
T PRK06674 14 KFEDVV-GQE-HVTKTLQNALLQ--EKVS-----HAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITN 84 (563)
T ss_pred CHHHHC-CHH-HHHHHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 765524-809-999999999984--9965-----0343128998689999999999857999999887766878999855
Q ss_pred ----H--HHHHHHCCCHHHHHH---HHH------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHH
Q ss_conf ----9--999986198899999---974------0310205444453175069999999999885698799964875676
Q gi|254780627|r 240 ----R--FASAIRDNCALNLKD---SLR------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSE 304 (502)
Q Consensus 240 ----~--~~~a~~~~~~~~fr~---~~r------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~ 304 (502)
T Consensus 85 g~~~DviEiDaasn~gVd~IR~i~~~v~~~P~~~~yKV~IIDeah~Lt-~~A~NALLKtLEEPP~~viFILaTte--p~- 160 (563)
T PRK06674 85 GSISDVLEIDAASNNGVDEIRDIRDKVKFAPSAVEYKVYIIDEVHMLS-IGAFNALLKTLEEPPGHVIFILATTE--PH- 160 (563)
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCC-HHHHHHHHHHHHCCCCCEEEEEECCC--HH-
T ss_conf 899877985255557879999999982648867873799985456379-99999999986388756499996599--47-
Q ss_pred HCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 13630345765302115775158889999999999988643116897898999999850278889999999999998630
Q gi|254780627|r 305 LESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSF 384 (502)
Q Consensus 305 l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~ 384 (502)
T Consensus 161 --ki~~TI~SRCQr---f~F~ri~~~~i~~rL~~I-----~~~E~i~~~~~aL~~Ia~~a~GsmRDAlsiLdQ~~s~~-- 228 (563)
T PRK06674 161 --KIPPTIISRCQR---FDFRRISVNDIVERLSTV-----VTNEGTQVEDEALQIIARAADGGMRDALSLLDQAISFS-- 228 (563)
T ss_pred --HCCHHHHHHHEE---EECCCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--
T ss_conf --584788733103---127889999999999999-----99849998788999999976997889999999999715--
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 24687788999998
Q gi|254780627|r 385 APILTAEIADELLS 398 (502)
Q Consensus 385 ~~~~~~~~~~~~l~ 398 (502)
T Consensus 229 ~~~i~~~~v~~~lG 242 (563)
T PRK06674 229 DERVTTEDVLAVTG 242 (563)
T ss_pred CCCCCHHHHHHHHC
T ss_conf 99768999999868