HHsearch alignment for GI: 254780627 and conserved domain: PRK07132

>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=96.02  E-value=0.16  Score=30.86  Aligned_cols=251  Identities=12%  Similarity=0.144  Sum_probs=121.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCC--------CEEEEEHHHHHHHHHHHHHCCC----HHHHHH-H-HHH-CCHH
Q ss_conf             89862788885799999999998630688--------1686469888999999986198----899999-9-740-3102
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNL--------RVVYLTAEYFMWRFASAIRDNC----ALNLKD-S-LRN-IDLL  263 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~--------~v~y~~~e~F~~~~~~a~~~~~----~~~fr~-~-~r~-~DvL  263 (502)
T Consensus        23 YLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~------~~i~~~~i~~~i~~~~~~~~~~~~~Kv~   96 (303)
T PRK07132         23 FLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFD------EDLSKEEFLSAIEKFSFSSFVSNQKKIL   96 (303)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC------CCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             8867899867999999999997299878887545653230413322------2001688999999997366556870699


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             05444453175069999999999885698799964875676136303457653021157751588899999999999886
Q gi|254780627|r  264 LIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAIS  343 (502)
Q Consensus       264 liDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~  343 (502)
T Consensus        97 IIdea~~lt-~~A~NaLLKtLEEPp~-~~~fil~t~~~-~---~il~TI~SRCq---~~~f~~~~~~~i~~~l~e~----  163 (303)
T PRK07132         97 IIKNIEKTS-NSSLNALLKTIEEPSK-NTYFLLTTKNI-N---KVIPTIVSRCQ---VINVKEPDQQKILAKLLSQ----  163 (303)
T ss_pred             EEECHHHCC-HHHHHHHHHHCCCCCC-CEEEEEEECCH-H---HCCHHHHHCCE---EEECCCCCHHHHHHHHHHC----
T ss_conf             981655339-9999999987038986-84899972882-4---38377863665---6637889999999999864----


Q ss_pred             HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC---------CCCHHHH
Q ss_conf             4311689789899999985027888999999999999863024687788999998763037887---------5798999
Q gi|254780627|r  344 QKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSFAPILTAEIADELLSHLVNTGETK---------KMRIEDI  414 (502)
Q Consensus       344 ~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~i~~~~I  414 (502)
T Consensus       164 -------~~~~e~~~~~a~~~~-n---~~~a~~~~----~---~e~~~~~~~~~~~l~~~~~~~~~~~~fl~~~~~~~~~  225 (303)
T PRK07132        164 -------NKEKEFEKFYAYIFK-N---FEDAIKYI----S---KISENLVKKFIKALNKSLKEKYSLLIFLNEKLNKENA  225 (303)
T ss_pred             -------CCCCHHHHHHHHHHC-C---HHHHHHHH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -------775278999999974-7---58899998----6---4239999999999998741147899999988778479


Q ss_pred             --HHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             --999999809999994088877401445799999999851568789998847984379999999999998616999999
Q gi|254780627|r  415 --QRMVAKHYNISRNDLLSNRRVRTVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETDITLKKE  492 (502)
Q Consensus       415 --~~~V~~~~~i~~~~l~s~~R~~~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~d~~~~~~  492 (502)
T Consensus       226 ~~l~~ll~~~---~~~i~~~~~~~~~~~~k~~~~~~~-------~~~~~~-----~~~~ii~~id~~~~~L~aNvNF~L~  290 (303)
T PRK07132        226 LFLVKLLLFY---FKSIFLNKKKKKIKNSKKTFLFEK-------YKEIKI-----SFYKVMTSIDEFLTKLEQNENFFIQ  290 (303)
T ss_pred             HHHHHHHHHH---HHHHHHHHCCHHHHHHHHHHHHHH-------HHHHHH-----HHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             9999999999---999988601001688998999999-------988887-----8999999999999988703488999


Q ss_pred             HHHHHHHHC
Q ss_conf             999998742
Q gi|254780627|r  493 VELLKRLIS  501 (502)
Q Consensus       493 i~~i~~~i~  501 (502)
T Consensus       291 ~E~mll~I~  299 (303)
T PRK07132        291 KQAFLLKIN  299 (303)
T ss_pred             HHHHHHHHH
T ss_conf             999999999