HHsearch alignment for GI: 254780627 and conserved domain: PRK07133

>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.76  E-value=4.3e-07  Score=70.44  Aligned_cols=211  Identities=17%  Similarity=0.121  Sum_probs=128.0

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEHHHH---H
Q ss_conf             88763288614789999999982410013655555489862788885799999999998630688-1686469888---9
Q gi|254780627|r  163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNL-RVVYLTAEYF---M  238 (502)
Q Consensus       163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~-~v~y~~~e~F---~  238 (502)
T Consensus        16 ~F~EVI-GQe-~Vv~tL~nAI~~--gRIa-----HAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~~~~~s   86 (718)
T PRK07133         16 KFDEIK-GQD-HIIETLKNIIKS--GKIS-----HAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIENFNNN   86 (718)
T ss_pred             CHHHHC-CCH-HHHHHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC
T ss_conf             754422-859-999999999974--9975-----0586238998688999999999967999999999770214304789


Q ss_pred             HHH--HHHHHCCCHHHHHHHHH---------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCC
Q ss_conf             999--99986198899999974---------0310205444453175069999999999885698799964875676136
Q gi|254780627|r  239 WRF--ASAIRDNCALNLKDSLR---------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELES  307 (502)
Q Consensus       239 ~~~--~~a~~~~~~~~fr~~~r---------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~  307 (502)
T Consensus        87 ~DViEIDAASn~gVDdIReLie~v~y~P~~gkYKVyIIDEvHMLS-~~AfNALLKtLEEPP~hvvFILaTTe--p~---K  160 (718)
T PRK07133         87 LDIIEMDAASNNGVDEIRELRENVKNLPQISKYKIYIIDEVHMLS-KSAFNALLKTLEEPPKHVIFILATTD--VQ---K  160 (718)
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCEEEEEECC--HH---H
T ss_conf             873775455668889999999982558877872499996620079-99999999850279878279997088--25---4


Q ss_pred             CCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             30345765302115775158889999999999988643116897898999999850278889999999999998630246
Q gi|254780627|r  308 LDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSFAPI  387 (502)
Q Consensus       308 l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~~~~  387 (502)
T Consensus       161 IP~TIlSRCQrFdFkrI~~~~I~~~L~---~I-----~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQv~~f~--ng~  230 (718)
T PRK07133        161 IPLTILSRVQRFNFRRISEDVIVHQLE---NI-----LEKEKIKYEKNALKLIASLASGSLRDALSIADQVSIFG--NGN  230 (718)
T ss_pred             CCHHHHHCCEEEECCCCCHHHHHHHHH---HH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCC
T ss_conf             848774122033588899999999999---99-----99859977899999999976884888987999999854--898


Q ss_pred             CCHHHHHHHHH
Q ss_conf             87788999998
Q gi|254780627|r  388 LTAEIADELLS  398 (502)
Q Consensus       388 ~~~~~~~~~l~  398 (502)
T Consensus       231 it~k~v~~~~G  241 (718)
T PRK07133        231 ITLKNVNELFG  241 (718)
T ss_pred             CCHHHHHHHHC
T ss_conf             72999999967