HHsearch alignment for GI: 254780627 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.76 E-value=4.3e-07 Score=70.44 Aligned_cols=211 Identities=17% Similarity=0.121 Sum_probs=128.0
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEHHHH---H
Q ss_conf 88763288614789999999982410013655555489862788885799999999998630688-1686469888---9
Q gi|254780627|r 163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNL-RVVYLTAEYF---M 238 (502)
Q Consensus 163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~-~v~y~~~e~F---~ 238 (502)
T Consensus 16 ~F~EVI-GQe-~Vv~tL~nAI~~--gRIa-----HAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~~~~~s 86 (718)
T PRK07133 16 KFDEIK-GQD-HIIETLKNIIKS--GKIS-----HAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIENFNNN 86 (718)
T ss_pred CHHHHC-CCH-HHHHHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC
T ss_conf 754422-859-999999999974--9975-----0586238998688999999999967999999999770214304789
Q ss_pred HHH--HHHHHCCCHHHHHHHHH---------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCC
Q ss_conf 999--99986198899999974---------0310205444453175069999999999885698799964875676136
Q gi|254780627|r 239 WRF--ASAIRDNCALNLKDSLR---------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELES 307 (502)
Q Consensus 239 ~~~--~~a~~~~~~~~fr~~~r---------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~ 307 (502)
T Consensus 87 ~DViEIDAASn~gVDdIReLie~v~y~P~~gkYKVyIIDEvHMLS-~~AfNALLKtLEEPP~hvvFILaTTe--p~---K 160 (718)
T PRK07133 87 LDIIEMDAASNNGVDEIRELRENVKNLPQISKYKIYIIDEVHMLS-KSAFNALLKTLEEPPKHVIFILATTD--VQ---K 160 (718)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCEEEEEECC--HH---H
T ss_conf 873775455668889999999982558877872499996620079-99999999850279878279997088--25---4
Q ss_pred CCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 30345765302115775158889999999999988643116897898999999850278889999999999998630246
Q gi|254780627|r 308 LDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSFAPI 387 (502)
Q Consensus 308 l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~~~~ 387 (502)
T Consensus 161 IP~TIlSRCQrFdFkrI~~~~I~~~L~---~I-----~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQv~~f~--ng~ 230 (718)
T PRK07133 161 IPLTILSRVQRFNFRRISEDVIVHQLE---NI-----LEKEKIKYEKNALKLIASLASGSLRDALSIADQVSIFG--NGN 230 (718)
T ss_pred CCHHHHHCCEEEECCCCCHHHHHHHHH---HH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCC
T ss_conf 848774122033588899999999999---99-----99859977899999999976884888987999999854--898
Q ss_pred CCHHHHHHHHH
Q ss_conf 87788999998
Q gi|254780627|r 388 LTAEIADELLS 398 (502)
Q Consensus 388 ~~~~~~~~~l~ 398 (502)
T Consensus 231 it~k~v~~~~G 241 (718)
T PRK07133 231 ITLKNVNELFG 241 (718)
T ss_pred CCHHHHHHHHC
T ss_conf 72999999967