HHsearch alignment for GI: 254780627 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=97.30 E-value=0.0056 Score=41.19 Aligned_cols=179 Identities=15% Similarity=0.123 Sum_probs=96.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEE--------EEEHHHHHH
Q ss_conf 288614789999999982410013655555489862788885799999999998630688168--------646988899
Q gi|254780627|r 168 IEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVV--------YLTAEYFMW 239 (502)
Q Consensus 168 VVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~--------y~~~e~F~~ 239 (502)
T Consensus 19 liGqe~~~~~L-~~a~~~--grl~-----HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~ 90 (363)
T PRK07471 19 LFGHAAAEAAL-LDAYRS--GRLH-----HAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVA 90 (363)
T ss_pred CCCHHHHHHHH-HHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHH
T ss_conf 16819999999-999985--9976-----458767999818899999999998579997777767870531258777289
Q ss_pred HHHHHHHCC--------------------CHHHHH---HHHH------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 999998619--------------------889999---9974------03102054444531750699999999998856
Q gi|254780627|r 240 RFASAIRDN--------------------CALNLK---DSLR------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDS 290 (502)
Q Consensus 240 ~~~~a~~~~--------------------~~~~fr---~~~r------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~ 290 (502)
T Consensus 91 r~i~~~~hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn-~~aaNALLK~LEEPP-~ 168 (363)
T PRK07471 91 RRIAAGAHGGLLTLERSWNEKGKRLRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMN-ANAANALLKVLEEPP-A 168 (363)
T ss_pred HHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHC-HHHHHHHHHHHCCCC-C
T ss_conf 99952699984667620011333212445399999999997248524896699986878738-899999999721589-8
Q ss_pred CCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf 98799964875676136303457653021157751588899999999999886431168978989999998502788899
Q gi|254780627|r 291 AKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRE 370 (502)
Q Consensus 291 gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~ 370 (502)
T Consensus 169 ~t~fiLit~~~~----~llpTI~SRCq---~~~~~~l~~~~~~~~L~~--------~~~~~~~~~~~~~la~~a~Gs~~~ 233 (363)
T PRK07471 169 RSLLLLVSHAPA----RLLPTIRSRCR---KLRLRPLAPEDVIAALAE--------AGGPALDDAELAALAALAEGSVGR 233 (363)
T ss_pred CEEEEEEECCHH----HCHHHHHHHCC---CCCCCCCCHHHHHHHHHH--------HCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 838998639977----77799997352---425899599999999998--------438999989999999975899999
Q ss_pred H
Q ss_conf 9
Q gi|254780627|r 371 L 371 (502)
Q Consensus 371 L 371 (502)
T Consensus 234 A 234 (363)
T PRK07471 234 A 234 (363)
T ss_pred H
T ss_conf 9