HHsearch alignment for GI: 254780627 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=97.15  E-value=0.019  Score=37.48  Aligned_cols=145  Identities=17%  Similarity=0.220  Sum_probs=85.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHH---------------------HCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             54898627888857999999999986---------------------306881686469888999999986198899999
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIK---------------------RQPNLRVVYLTAEYFMWRFASAIRDNCALNLKD  255 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~---------------------~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~  255 (502)
T Consensus        29 HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD--~~~i~p~~------~~i~idqiR~L~~  100 (329)
T PRK08058         29 HAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPD--VHLVAPDG------QSIKKDQIRYLKE  100 (329)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCC--EEEECCCC------CCCCHHHHHHHHH
T ss_conf             156557899988999999999997399999999887888999987699997--67745661------4077999999999


Q ss_pred             HH--H----HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCH
Q ss_conf             97--4----03102054444531750699999999998856987999648756761363034576530211577515888
Q gi|254780627|r  256 SL--R----NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDY  329 (502)
Q Consensus       256 ~~--r----~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~  329 (502)
T Consensus       101 ~~~~~p~~g~~KV~II~~Ae~m~-~~AaNALLKtLEEPp-~~t~fIL~t~~~-~---~lLpTI~SRCq---~i~f~~~~~  171 (329)
T PRK08058        101 EFSKSGVESNKKVYIIEHADKMT-ASAANSLLKFLEEPS-GDTTAILLTENK-H---QILPTILSRCQ---VVEFRPLPP  171 (329)
T ss_pred             HHCCCCCCCCCEEEEEECHHHHC-HHHHHHHHHHHHCCC-CCCEEEEEECCH-H---HHHHHHHHCCE---EEECCCCCH
T ss_conf             96438757886799973477629-999999999864689-786799872996-6---64368863142---565889999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf             99999999999886431168978989999998502788899
Q gi|254780627|r  330 EMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRE  370 (502)
Q Consensus       330 e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~  370 (502)
T Consensus       172 ~~i~~~L~~---------~~--i~~~~a~-l~a~~~gs~~~  200 (329)
T PRK08058        172 ESLIQRLQE---------EG--ISESLAT-LLAQLTNSVEE  200 (329)
T ss_pred             HHHHHHHHH---------CC--CCHHHHH-HHHHHCCCHHH
T ss_conf             999999998---------79--9989999-99987899999