HHsearch alignment for GI: 254780627 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=99.63 E-value=2.5e-14 Score=121.81 Aligned_cols=136 Identities=21% Similarity=0.339 Sum_probs=114.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-CH
Q ss_conf 48986278888579999999999863068816864698889999999861988999999740310205444453175-06
Q gi|254780627|r 198 PLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-LI 276 (502)
Q Consensus 198 PLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~t 276 (502)
T Consensus 108 Nvil~Gp~GtGKThLA~Alg~~A~~~--G~~V~f~~~~~L~~~L~~a~~~~~~~~~~~~l~~~dLLIiDe~G~~~~~~~~ 185 (269)
T PRK08181 108 NLLLFGPPGGGKSHLAAAIGLALIEN--GWRVLFTRTTDLVQKLQVARRELQLESAIAKLDKFDLLILDDLAYVTKDQAE 185 (269)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC--CCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHCCCCCCCHHH
T ss_conf 08998999987889999999999987--9939997899999999997755839999999744460122010566799899
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCHHHHCC------CCHHHHHHH-HCCEEEEECCCCHHHHHHHH
Q ss_conf 9999999999885698799964875676136------303457653-02115775158889999999
Q gi|254780627|r 277 QHEFCHLLNSLLDSAKQVVAAADRPPSELES------LDPRIRSRL-QGGVSVPLGLHDYEMRFSIL 336 (502)
Q Consensus 277 qee~f~~~n~l~~~gkqiv~tsd~~P~~l~~------l~~rL~SR~-~~Gl~~~i~~Pd~e~r~~Il 336 (502)
T Consensus 186 ~~~lf~lI~~Rye-~~S~IITSn~~~~~W~~~f~D~~la~AiLDRLvH~a~~i~l~GeSyR~k~a~~ 251 (269)
T PRK08181 186 TSVLFELISARYE-RRSILITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNVESYRRRTALE 251 (269)
T ss_pred HHHHHHHHHHHHC-CCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHH
T ss_conf 9999999999857-88889988999778877538688999999987015289975587612056787