HHsearch alignment for GI: 254780627 and conserved domain: PRK08451

>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.84  E-value=6e-07  Score=69.37  Aligned_cols=211  Identities=17%  Similarity=0.189  Sum_probs=127.9

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCCE--EEEEHHHHHH
Q ss_conf             88763288614789999999982410013655555489862788885799999999998630-68816--8646988899
Q gi|254780627|r  163 VFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQ-PNLRV--VYLTAEYFMW  239 (502)
Q Consensus       163 TFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~-~~~~v--~y~~~e~F~~  239 (502)
T Consensus        12 ~F~evI-GQe~-iv~~L~nAi~~--~Rl~-----HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i~~   82 (523)
T PRK08451         12 HFDELI-GQES-VSKTLSLALDN--NRLA-----HAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAALE   82 (523)
T ss_pred             CHHHCC-CCHH-HHHHHHHHHHC--CCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             654404-9499-99999999985--9967-----1587578998688999999999975999999898887888999864


Q ss_pred             H----H--HHHHHCCCHHHHHHHHH---------HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHH
Q ss_conf             9----9--99986198899999974---------0310205444453175069999999999885698799964875676
Q gi|254780627|r  240 R----F--ASAIRDNCALNLKDSLR---------NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSE  304 (502)
Q Consensus       240 ~----~--~~a~~~~~~~~fr~~~r---------~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~  304 (502)
T Consensus        83 g~hpDViEiDaasn~gID~IReLie~~~~~P~~gryKV~IIDEah~Lt-~~A~NALLKTLEEPP~~vvFILaTTe--p~-  158 (523)
T PRK08451         83 GRHIDIIEMDAASNRGIDDIRNLIEQTKYKPSMARFKIFIIDEVHMLT-KEAFNALLKTLEEPPSYVKFILATTD--PL-  158 (523)
T ss_pred             CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC-HHHHHHHHHHCCCCCCCCEEEEECCC--HH-
T ss_conf             899985510553336899999999972358867972799982603048-99999999970389878379997599--47-


Q ss_pred             HCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             13630345765302115775158889999999999988643116897898999999850278889999999999998630
Q gi|254780627|r  305 LESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSF  384 (502)
Q Consensus       305 l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~  384 (502)
T Consensus       159 --KLp~TIlSRCQ~f~Fk~I~~~~I~~~L~---~I-----~~~E~i~~e~~AL~~IA~~a~GslRDalslLdQ~i~~~~-  227 (523)
T PRK08451        159 --KLPATILSRTQHFRFKQIPQNSIISHLK---TI-----LNKEGVSYEPEALEILARSGSGSLRDTLTLLDQAIIFCK-  227 (523)
T ss_pred             --HCHHHHHHHHHCCCCCCCCHHHHHHHHH---HH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC-
T ss_conf             --6848887420311033799999999999---99-----998399879999999999778948689879999998479-


Q ss_pred             CCCCCHHHHHHHHH
Q ss_conf             24687788999998
Q gi|254780627|r  385 APILTAEIADELLS  398 (502)
Q Consensus       385 ~~~~~~~~~~~~l~  398 (502)
T Consensus       228 -~~i~~~~v~~~lG  240 (523)
T PRK08451        228 -NAITESKVADMLG  240 (523)
T ss_pred             -CCCCHHHHHHHHC
T ss_conf             -9877999999858