HHsearch alignment for GI: 254780627 and conserved domain: PRK08699

>PRK08699 DNA polymerase III subunit delta'; Validated.
Probab=94.30  E-value=0.27  Score=29.27  Aligned_cols=131  Identities=15%  Similarity=0.157  Sum_probs=75.2

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCC--------------------CEEEEEHHHHHHHHHHHH--HCCCHHHHH
Q ss_conf             5489862788885799999999998630688--------------------168646988899999998--619889999
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIKRQPNL--------------------RVVYLTAEYFMWRFASAI--RDNCALNLK  254 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~--------------------~v~y~~~e~F~~~~~~a~--~~~~~~~fr  254 (502)
T Consensus        22 HA~L~~Gp~G~Gk~~~A~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~g~HPD~~~i~p~~~~~~--~g~~~~~I~idqiR   99 (325)
T PRK08699         22 NAWLFVGKKGTGKTAFARFAAKALLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLADEPE--NGRKLLQIKIDAVR   99 (325)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC--CCCCCCCCCHHHHH
T ss_conf             1797579999789999999999982899988899898888899986599999688513445300--16655667699999


Q ss_pred             H---H-----HH-HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEEC
Q ss_conf             9---9-----74-0310205444453175069999999999885698799964875676136303457653021157751
Q gi|254780627|r  255 D---S-----LR-NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLG  325 (502)
Q Consensus       255 ~---~-----~r-~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~  325 (502)
T Consensus       100 ~l~~~~~~~~~~~~~kV~ii~~ae~mn-~~aaNaLLK~LEEP-p~~~~fiL~t~~~~----~llpTI~SRc~---~~~~~  170 (325)
T PRK08699        100 EIIDNVYLTSVRGGLRVILIHPAESMN-VQAANSLLKVLEEP-PPQVVFLLVSHAAD----KVLPTIKSRCR---KMVLP  170 (325)
T ss_pred             HHHHHHCCCCCCCCCEEEEECCHHHHC-HHHHHHHHHHHCCC-CCCEEEEEEECCHH----HCCCHHHHCCC---CCCCC
T ss_conf             999997108656894699985777758-99999999984178-88848999879846----46233986454---21089


Q ss_pred             CCCHHHHHHHHHH
Q ss_conf             5888999999999
Q gi|254780627|r  326 LHDYEMRFSILKN  338 (502)
Q Consensus       326 ~Pd~e~r~~Il~~  338 (502)
T Consensus       171 ~p~~~~~~~~L~~  183 (325)
T PRK08699        171 APSHEEALAYLRE  183 (325)
T ss_pred             CCCHHHHHHHHHH
T ss_conf             9599999999997