HHsearch alignment for GI: 254780627 and conserved domain: PRK08727

>PRK08727 hypothetical protein; Validated.
Probab=100.00  E-value=1.1e-42  Score=323.37  Aligned_cols=218  Identities=19%  Similarity=0.252  Sum_probs=191.0

Q ss_pred             CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHH
Q ss_conf             57644788763288614789999999982410013655555489862788885799999999998630688168646988
Q gi|254780627|r  157 PLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEY  236 (502)
Q Consensus       157 ~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~  236 (502)
T Consensus        11 ~~~~~~tfdnFi~~~n~~~a~l~--~~~~--~~-----~~~~lyl~G~~GsGKTHLl~a~~~~~~~~--~~~~~yl~l~~   79 (233)
T PRK08727         11 RAPSDQRFDSYIAAPDGLLAQLQ--ALAA--GQ-----SSDWLYLSGPAGTGKTHLALSLCAAAEQA--GRSSAYLPLQA   79 (233)
T ss_pred             CCCCCCCHHHCCCCCHHHHHHHH--HHHC--CC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEHHH
T ss_conf             99972242120678559999999--8743--88-----88989998999998899999999999827--99728844788


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHH
Q ss_conf             899999998619889999997403102054444531750-6999999999988569879996487567613630345765
Q gi|254780627|r  237 FMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGKL-IQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSR  315 (502)
Q Consensus       237 F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk~-tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR  315 (502)
T Consensus        80 ~~~~~~~~l---------~~le~~~ll~iDDid~i~g~~~~e~aLFhL~N~~~~~~~~ll~ts~~~P~~l~~~l~DL~SR  150 (233)
T PRK08727         80 AAGRLRDAL---------EALEGRSLVALDGVDSIAGQREDEVALFDFHNRARAAGITLLYTARQMPDGLALVLPDLRSR  150 (233)
T ss_pred             HHHHHHHHH---------HHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHH
T ss_conf             532025677---------53103897898550112698279999999999998619838997798956623100219999


Q ss_pred             HHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HCCCCCHHHHH
Q ss_conf             30211577515888999999999998864311689789899999985027888999999999999863-02468778899
Q gi|254780627|r  316 LQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHS-FAPILTAEIAD  394 (502)
Q Consensus       316 ~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~-~~~~~~~~~~~  394 (502)
T Consensus       151 L~~~~~~~l~~~dD~~~~~iL~~~-----a~~rgl~l~~~V~~Yll~r~~R~~~~l~~~l~~LD~~SL~~kr~iTip~vk  225 (233)
T PRK08727        151 LSQCIRIGLPVLDDVARAAVLRDR-----AQRRGLALDEAAIDWLLTHGERELAGLVALLDRLDRESLAAKRRITVPFLR  225 (233)
T ss_pred             HHCCCEEEECCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             966922885788979999999999-----998699999899999998568899999999999999999808988899999


Q ss_pred             HHHHH
Q ss_conf             99987
Q gi|254780627|r  395 ELLSH  399 (502)
Q Consensus       395 ~~l~~  399 (502)
T Consensus       226 ~vL~e  230 (233)
T PRK08727        226 RVLEE  230 (233)
T ss_pred             HHHHH
T ss_conf             99972