HHsearch alignment for GI: 254780627 and conserved domain: PRK08727
>PRK08727 hypothetical protein; Validated.
Probab=100.00 E-value=1.1e-42 Score=323.37 Aligned_cols=218 Identities=19% Similarity=0.252 Sum_probs=191.0
Q ss_pred CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHH
Q ss_conf 57644788763288614789999999982410013655555489862788885799999999998630688168646988
Q gi|254780627|r 157 PLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEY 236 (502)
Q Consensus 157 ~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~ 236 (502)
T Consensus 11 ~~~~~~tfdnFi~~~n~~~a~l~--~~~~--~~-----~~~~lyl~G~~GsGKTHLl~a~~~~~~~~--~~~~~yl~l~~ 79 (233)
T PRK08727 11 RAPSDQRFDSYIAAPDGLLAQLQ--ALAA--GQ-----SSDWLYLSGPAGTGKTHLALSLCAAAEQA--GRSSAYLPLQA 79 (233)
T ss_pred CCCCCCCHHHCCCCCHHHHHHHH--HHHC--CC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEHHH
T ss_conf 99972242120678559999999--8743--88-----88989998999998899999999999827--99728844788
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHH
Q ss_conf 899999998619889999997403102054444531750-6999999999988569879996487567613630345765
Q gi|254780627|r 237 FMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGKL-IQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSR 315 (502)
Q Consensus 237 F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk~-tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR 315 (502)
T Consensus 80 ~~~~~~~~l---------~~le~~~ll~iDDid~i~g~~~~e~aLFhL~N~~~~~~~~ll~ts~~~P~~l~~~l~DL~SR 150 (233)
T PRK08727 80 AAGRLRDAL---------EALEGRSLVALDGVDSIAGQREDEVALFDFHNRARAAGITLLYTARQMPDGLALVLPDLRSR 150 (233)
T ss_pred HHHHHHHHH---------HHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHH
T ss_conf 532025677---------53103897898550112698279999999999998619838997798956623100219999
Q ss_pred HHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HCCCCCHHHHH
Q ss_conf 30211577515888999999999998864311689789899999985027888999999999999863-02468778899
Q gi|254780627|r 316 LQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHS-FAPILTAEIAD 394 (502)
Q Consensus 316 ~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~-~~~~~~~~~~~ 394 (502)
T Consensus 151 L~~~~~~~l~~~dD~~~~~iL~~~-----a~~rgl~l~~~V~~Yll~r~~R~~~~l~~~l~~LD~~SL~~kr~iTip~vk 225 (233)
T PRK08727 151 LSQCIRIGLPVLDDVARAAVLRDR-----AQRRGLALDEAAIDWLLTHGERELAGLVALLDRLDRESLAAKRRITVPFLR 225 (233)
T ss_pred HHCCCEEEECCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 966922885788979999999999-----998699999899999998568899999999999999999808988899999
Q ss_pred HHHHH
Q ss_conf 99987
Q gi|254780627|r 395 ELLSH 399 (502)
Q Consensus 395 ~~l~~ 399 (502)
T Consensus 226 ~vL~e 230 (233)
T PRK08727 226 RVLEE 230 (233)
T ss_pred HHHHH
T ss_conf 99972