HHsearch alignment for GI: 254780627 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=98.80 E-value=4.3e-06 Score=63.34 Aligned_cols=283 Identities=15% Similarity=0.187 Sum_probs=149.7
Q ss_pred CCCCCHHHH--HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf 288614789--999999982410013655555489862788885799999999998630688168646988899999998
Q gi|254780627|r 168 IEGSSNRVA--LTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAI 245 (502)
Q Consensus 168 VVG~sN~lA--~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~ 245 (502)
T Consensus 140 liG~S~~m~~v~~~i~~~a~~~---------~pVLI~GE~GTGK~~~Ar~IH~~S--~r~~~pfi~vnC~~~~~~~~e~e 208 (469)
T PRK10923 140 IIGEAPAMQDVFRIIGRLSRSS---------ISVLINGESGTGKELVAHALHRHS--PRAKAPFIALNMAAIPKDLIESE 208 (469)
T ss_pred CEECCHHHHHHHHHHHHHHCCC---------CCEEEECCCCCCHHHHHHHHHHCC--CCCCCCCEEEECCCCCHHHHHHH
T ss_conf 5468999999999999985889---------978998989826999999999748--87799957876788997789999
Q ss_pred ----HCCC---HHHHH-HHH--HHCCHHHHHHHHHHCCCCHHHHHHHHHHHH--H--------HCCCEEEEECCCCHHHH
Q ss_conf ----6198---89999-997--403102054444531750699999999998--8--------56987999648756761
Q gi|254780627|r 246 ----RDNC---ALNLK-DSL--RNIDLLLIDDMQFLQGKLIQHEFCHLLNSL--L--------DSAKQVVAAADRPPSEL 305 (502)
Q Consensus 246 ----~~~~---~~~fr-~~~--r~~DvLliDDiqfl~gk~tqee~f~~~n~l--~--------~~gkqiv~tsd~~P~~l 305 (502)
T Consensus 209 LFG~~~gaf~ga~~~~~g~~e~a~~GTLfLdeI~~L~-~~~Q~kLl~~L~~~~~~~~g~~~~~~~d~RiIaat~~~L~~~ 287 (469)
T PRK10923 209 LFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMP-LDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQR 287 (469)
T ss_pred HHCCCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHCC-HHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECCCCHHHH
T ss_conf 7087667878864245873664389926566366489-999999999985593785799851221437997078799998
Q ss_pred ---CCCCHHHHHHHHCCEEEEECCCCHHHHHH----HHHHHHHHHHHHC--CCCCCCHHHHHHH-HHHCCCCHHHHHHHH
Q ss_conf ---36303457653021157751588899999----9999998864311--6897898999999-850278889999999
Q gi|254780627|r 306 ---ESLDPRIRSRLQGGVSVPLGLHDYEMRFS----ILKNRLAISQKED--PKLNINEEVLMHV-ARTVTTSGRELDGAF 375 (502)
Q Consensus 306 ---~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~----Il~~k~~~~~~~~--~~~~l~~~v~~~l-a~~~~~~vR~Legal 375 (502)
T Consensus 288 v~~g~Fr~dLyyrL~~---~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvrEL~n~i 364 (469)
T PRK10923 288 VQEGKFREDLFHRLNV---IRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTC 364 (469)
T ss_pred HHHCCHHHHHHHHHHH---HCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 6608177999986442---4015846544653499999999999999859997878999999997499998799999999
Q ss_pred HHHHHHHHHCCCCCHH-HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC----CCHHHHHCCCCCHHHCHHHHHHHHH--
Q ss_conf 9999986302468778-89999987630378875798999999999809----9999940888774014457999999--
Q gi|254780627|r 376 NQLVFRHSFAPILTAE-IADELLSHLVNTGETKKMRIEDIQRMVAKHYN----ISRNDLLSNRRVRTVVRPRQVAMYL-- 448 (502)
Q Consensus 376 ~~l~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~----i~~~~l~s~~R~~~i~~~RqiamyL-- 448 (502)
T Consensus 365 er~~~~~~-~~~i~~~dl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~l~~~Er~~I~~ 436 (469)
T PRK10923 365 RWLTVMAA-GQEVLIQDLPGELFESTVP-DSTSQMQPDSWATLLAQWADRALRSGHQNLLSE------AQPELERTLLTT 436 (469)
T ss_pred HHHHHHCC-CCCCCHHHCCHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH------HHHHHHHHHHHH
T ss_conf 99998579-9825477572988633377-765455774034442110011111342015899------999999999999
Q ss_pred HHHHCCCCHHHHHHHHCCCCHHHHHH
Q ss_conf 99851568789998847984379999
Q gi|254780627|r 449 SKIMTPRSFPEIGRRFGDRDHTTVLH 474 (502)
Q Consensus 449 ~r~~t~~s~~~IG~~fg~rdHsTV~~ 474 (502)
T Consensus 437 aL~~~~gn~~~aA~~LG-isR~TLyr 461 (469)
T PRK10923 437 ALRHTQGHKQEAARLLG-WGRNTLTR 461 (469)
T ss_pred HHHHHCCCHHHHHHHHC-CCHHHHHH
T ss_conf 99990998999999989-89999999