HHsearch alignment for GI: 254780627 and conserved domain: PRK12726
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional.
Probab=92.89 E-value=0.75 Score=26.09 Aligned_cols=38 Identities=26% Similarity=0.405 Sum_probs=32.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf 8986278888579999999999863068816864698889
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFM 238 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~ 238 (502)
T Consensus 209 IaLVGvnGvGKTTTiAKLA~~l~~~--gkkV~LVAaDTFR 246 (407)
T PRK12726 209 ISLIGQTGVGKTTTLVKLGWQLLKQ--NRTVGFITTDTFR 246 (407)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCC
T ss_conf 9998999897899999999999977--9917999706677