HHsearch alignment for GI: 254780627 and conserved domain: PRK13830
>PRK13830 conjugal transfer protein TrbE; Provisional.
Probab=91.45 E-value=0.38 Score=28.17 Aligned_cols=46 Identities=24% Similarity=0.287 Sum_probs=31.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf 89862788885799999999998630688168646988899999998
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAI 245 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~ 245 (502)
T Consensus 459 tlIiGpTGsGKTvll~fl~aq~-~ky~~~~vf~FDKd~s~~i~~~a~ 504 (818)
T PRK13830 459 TLIFGPTGSGKSTLLALIAAQF-RRYAGAQIFAFDKGRSMLPLTLAA 504 (818)
T ss_pred EEEECCCCCCHHHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHH
T ss_conf 5898999998899999999998-642798389974887689999980