HHsearch alignment for GI: 254780627 and conserved domain: TIGR02525

>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364 Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii..
Probab=96.80  E-value=0.00082  Score=47.10  Aligned_cols=71  Identities=21%  Similarity=0.293  Sum_probs=46.5

Q ss_pred             HHHCCCCCHHHHHHHH--HHHHHCCCCCCC-----------CCCCCEE-EEECCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             7632886147899999--999824100136-----------5555548-9862788885799999999998630688168
Q gi|254780627|r  165 STFIEGSSNRVALTAA--QSIAEVDSHGYT-----------TVRLNPL-FIHASVGLGKTHLLQAIANASIKRQPNLRVV  230 (502)
Q Consensus       165 DnFVVG~sN~lA~aAA--kaVAe~pg~~~~-----------~~~~NPL-fi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~  230 (502)
T Consensus       104 ~nf~QAt~~~~~~AislTlRvips~IP~L~~MgiE~DLf~alLP~~GLGLiCG~TGSGKSTl~AaiY~~~l~t~pdRKiv  183 (374)
T TIGR02525       104 CNFIQATIGKLETAISLTLRVIPSDIPDLKKMGIEPDLFEALLPKAGLGLICGETGSGKSTLAAAIYRHCLETYPDRKIV  183 (374)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             10004415554444434420055666513234787689987050037802217789728999999999850748897079


Q ss_pred             EEEHHHH
Q ss_conf             6469888
Q gi|254780627|r  231 YLTAEYF  237 (502)
Q Consensus       231 y~~~e~F  237 (502)
T Consensus       184 --T~EDP  188 (374)
T TIGR02525       184 --TYEDP  188 (374)
T ss_pred             --EEECC
T ss_conf             --86577