HHsearch alignment for GI: 254780627 and conserved domain: TIGR02881

>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=94.79  E-value=0.39  Score=28.07  Aligned_cols=154  Identities=18%  Similarity=0.294  Sum_probs=106.6

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHH--HHHHHHHHHHHCCCHHHHHHHHHH--CCHHHHHHHHHHC--C
Q ss_conf             986278888579999999999863068816864698--889999999861988999999740--3102054444531--7
Q gi|254780627|r  200 FIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAE--YFMWRFASAIRDNCALNLKDSLRN--IDLLLIDDMQFLQ--G  273 (502)
Q Consensus       200 fi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e--~F~~~~~~a~~~~~~~~fr~~~r~--~DvLliDDiqfl~--g  273 (502)
T Consensus        46 iFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ERADLVGEYI----GHTAqkTRe~~kkA~GGvLFiDEAYSLaRGG  121 (261)
T TIGR02881        46 IFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVERADLVGEYI----GHTAQKTREVIKKALGGVLFIDEAYSLARGG  121 (261)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC----CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf             742786684389999999998533756788678876222122320----3004899999998638800557777761488


Q ss_pred             -CC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHHC---CCCHHHHHHHHCCEEEEECCCCHHH--HHHHHHHHHHHHHHH
Q ss_conf             -50-6999999999988569879996487567613---6303457653021157751588899--999999999886431
Q gi|254780627|r  274 -KL-IQHEFCHLLNSLLDSAKQVVAAADRPPSELE---SLDPRIRSRLQGGVSVPLGLHDYEM--RFSILKNRLAISQKE  346 (502)
Q Consensus       274 -k~-tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~---~l~~rL~SR~~~Gl~~~i~~Pd~e~--r~~Il~~k~~~~~~~  346 (502)
T Consensus       122 EKDFGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL~SRFP----i~i~FPdY~~eeL~~Ia~~m-----~~  192 (261)
T TIGR02881       122 EKDFGKEAIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGLRSRFP----ISIDFPDYTVEELMEIAERM-----VK  192 (261)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCC----CEEECCCCCHHHHHHHHHHH-----HH
T ss_conf             8876620888999987615698689970876899998620779777665----05418899888999999999-----86


Q ss_pred             CCCCCCCHHHHHHHHHHCCC
Q ss_conf             16897898999999850278
Q gi|254780627|r  347 DPKLNINEEVLMHVARTVTT  366 (502)
Q Consensus       347 ~~~~~l~~~v~~~la~~~~~  366 (502)
T Consensus       193 ~ReY~Lt~~A~~~lr~~l~~  212 (261)
T TIGR02881       193 EREYKLTEEAKWKLREHLAK  212 (261)
T ss_pred             HHHHCCCHHHHHHHHHHHHH
T ss_conf             46422578899999999741