>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..

Probab=92.95 E-value=0.083 Score=32.88 Aligned_cols=224 Identities=22% Similarity=0.271 Sum_probs=117.5 Q ss_pred CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC---- Q ss_conf 5434455764478876328861478999999998241001365555548986278888579999999999863068---- Q gi|254780627|r 151 SPVFGSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPN---- 226 (502) Q Consensus 151 ~~~~~s~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~---- 226 (502) T Consensus 142 ~~s~~slLRP~-~f~E-iVGQerAI--~aLla---K~aSPfPQH----iiLYGPPGVGKTTaARl~-LEe~K~~~~tPF~ 209 (616) T TIGR02903 142 AKSIQSLLRPR-AFSE-IVGQERAI--KALLA---KLASPFPQH----IILYGPPGVGKTTAARLA-LEEAKKLKNTPFA 209 (616) T ss_pred HHHHHHHCCCC-CCCC-CCCHHHHH--HHHHH---HHCCCCCCC----EEEECCCCCCHHHHHHHH-HHHCCCCCCCCCC T ss_conf 99999862876-6764-33346899--99997---631888660----785573388478999998-7621368744761 Q ss_pred --CCEEEEEHHH-------HHHHHHHHHHC----CCHHHHHH--------HHH---HCCHHHHHHHHH----HCCC--CH Q ss_conf --8168646988-------89999999861----98899999--------974---031020544445----3175--06 Q gi|254780627|r 227 --LRVVYLTAEY-------FMWRFASAIRD----NCALNLKD--------SLR---NIDLLLIDDMQF----LQGK--LI 276 (502) Q Consensus 227 --~~v~y~~~e~-------F~~~~~~a~~~----~~~~~fr~--------~~r---~~DvLliDDiqf----l~gk--~t 276 (502) T Consensus 210 ~DA~FvEVDGtTLRWDPREvTNPLLGSVHDPIYQGa~RDLAE~GvPEPk~GLVT~AHGGvLFIDEIGELD~lLQnKLLKV 289 (616) T TIGR02903 210 EDAPFVEVDGTTLRWDPREVTNPLLGSVHDPIYQGARRDLAETGVPEPKLGLVTDAHGGVLFIDEIGELDPLLQNKLLKV 289 (616) T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHH T ss_conf 13785751576266774101477677625765567640110478798989871004775676502112227876324443 Q ss_pred HH----HH------------HHHHHHHHHCCCE----EEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHH Q ss_conf 99----99------------9999998856987----9996487567613630345765302115775158889999999 Q gi|254780627|r 277 QH----EF------------CHLLNSLLDSAKQ----VVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSIL 336 (502) Q Consensus 277 qe----e~------------f~~~n~l~~~gkq----iv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il 336 (502) T Consensus 290 LEDKrV~F~SsYYDpdD~NvPkYIK~lFe~GAPADFvLIGATTr~P~eIN---pALRSRCaEvfF---ePL~p~dI~~Iv 363 (616) T TIGR02903 290 LEDKRVEFSSSYYDPDDENVPKYIKKLFEEGAPADFVLIGATTRDPEEIN---PALRSRCAEVFF---EPLTPEDIKEIV 363 (616) T ss_pred HCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHCC---HHHHCCCCEEEC---CCCCHHHHHHHH T ss_conf 22643665321248753786558888522688825687266158824405---123301431321---798878999999 Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC----------CCCHHHHHHHHH Q ss_conf 99998864311689789899999985027888999999999999863024----------687788999998 Q gi|254780627|r 337 KNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSFAP----------ILTAEIADELLS 398 (502) Q Consensus 337 ~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~~~----------~~~~~~~~~~l~ 398 (502) T Consensus 364 ~~-A----A~klnv~L~~gV~e~Ia~-YTieGRkAvnILAD~Yg~~ly~~~~~~~~~d~~~I~~~dv~evv~ 429 (616) T TIGR02903 364 LN-A----AEKLNVKLAEGVEELIAR-YTIEGRKAVNILADVYGYALYKKAEALKEEDKVTITADDVKEVVQ 429 (616) T ss_pred HH-H----HHHCCCCCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH T ss_conf 99-8----886177000364878721-471311222346546767653045556777742661867776775

HHsearch alignment for GI: 254780627 and conserved domain: TIGR02903