HHsearch alignment for GI: 254780627 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.55 E-value=7e-06 Score=61.83 Aligned_cols=300 Identities=15% Similarity=0.167 Sum_probs=161.9
Q ss_pred CCCCHHHHH--HHCCCCCHHHH-HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHH----HHHHHHHHHHHHHCCC-CC
Q ss_conf 576447887--63288614789-9999999824100136555554898627888857----9999999999863068-81
Q gi|254780627|r 157 PLDSRFVFS--TFIEGSSNRVA-LTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKT----HLLQAIANASIKRQPN-LR 228 (502)
Q Consensus 157 ~LNpryTFD--nFVVG~sN~lA-~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKT----HLl~ai~~~~~~~~~~-~~ 228 (502)
T Consensus 7 ~L~~dY~Pden~i~-hRdeqI~~l~~~L~~~l~PG~~P-----~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~ 80 (383)
T TIGR02928 7 LLEPDYVPDENRIV-HRDEQIEELAKALRPILRPGSRP-----SNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVS 80 (383)
T ss_pred CCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCC-----CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 37757702742466-86789999999988750674898-----7258878889878899999999999986226997158
Q ss_pred EEEEEHHHHH------HHHHHHH-H---CCCH--------HHHHHHHH-------HCCHHHHHHHHHHCCCCHHHH----
Q ss_conf 6864698889------9999998-6---1988--------99999974-------031020544445317506999----
Q gi|254780627|r 229 VVYLTAEYFM------WRFASAI-R---DNCA--------LNLKDSLR-------NIDLLLIDDMQFLQGKLIQHE---- 279 (502)
Q Consensus 229 v~y~~~e~F~------~~~~~a~-~---~~~~--------~~fr~~~r-------~~DvLliDDiqfl~gk~tqee---- 279 (502)
T Consensus 81 ~~~~NC~~~~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv-~~~~d~PAyS 159 (383)
T TIGR02928 81 TVYINCQILDTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLV-RKDDDDPAYS 159 (383)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH-CCCCCCHHHH
T ss_conf 999778546846999999999851577888898877878999999999983201887999862310221-5888880787
Q ss_pred -HHHHHHHHHHCC----CE---EEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCH--HHHHHHHHHHH-HHHHHHCC
Q ss_conf -999999988569----87---999648756761363034576530211577515888--99999999999-88643116
Q gi|254780627|r 280 -FCHLLNSLLDSA----KQ---VVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDY--EMRFSILKNRL-AISQKEDP 348 (502)
Q Consensus 280 -~f~~~n~l~~~g----kq---iv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~--e~r~~Il~~k~-~~~~~~~~ 348 (502)
T Consensus 160 ~~LY~L~Ra~~~~~~~~~~vgvIgISND--~~f~~~Ld~RVkSsL~~---eei~FpPYdA~eL~~IL~~R~v~~AF--~d 232 (383)
T TIGR02928 160 KLLYQLSRARENGDLENAKVGVIGISND--LKFRENLDPRVKSSLCE---EEIVFPPYDAEELRDILENRAVEKAF--YD 232 (383)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEEECC--CHHHHHCCCCEECCCCC---CCCEECCCCHHHHHHHHHHHHHHHCC--CC
T ss_conf 8853433100035778853489998657--14364457530132487---40040798869999999720312033--68
Q ss_pred CCCCCHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HCC
Q ss_conf 89789899999985---02788899999999999986302468778899999876303788757989999999998-099
Q gi|254780627|r 349 KLNINEEVLMHVAR---TVTTSGRELDGAFNQLVFRHSFAPILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKH-YNI 424 (502)
Q Consensus 349 ~~~l~~~v~~~la~---~~~~~vR~Legal~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~-~~i 424 (502)
T Consensus 233 G-vl~d~VI~lcAA~aAq~hGDAR~AiDLLR~AGe~A~~-------------------~g~~~Vt~~HV~~A~e~~PE~~ 292 (383)
T TIGR02928 233 G-VLDDGVIPLCAALAAQEHGDARKAIDLLRVAGEIAER-------------------EGAERVTEDHVEEAQEKIPEVD 292 (383)
T ss_pred C-CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-------------------CCCCCCHHHHHHHHHHHCCHHH
T ss_conf 8-5462279999998620678789999999987687531-------------------5763100888999998322288
Q ss_pred CHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf 99994088877401445799999999851568789998847984379999-999999998616999999999998742
Q gi|254780627|r 425 SRNDLLSNRRVRTVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLH-AVRKVEKMLETDITLKKEVELLKRLIS 501 (502)
Q Consensus 425 ~~~~l~s~~R~~~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~-a~~ki~~~~~~d~~~~~~i~~i~~~i~ 501 (502)
T Consensus 293 r~~e~-----~~~Lp~h~k~~L~A~~~l~~~~~---~---~~~~~t~~vY~~Y~~~c~~~~~dpl~~rR~~~~l~eL~ 359 (383)
T TIGR02928 293 RVLEL-----IRGLPTHSKLVLLAIANLAAESP---E---EDPFRTGEVYEVYKELCEDIGVDPLTQRRISDLLNELD 359 (383)
T ss_pred HHHHH-----HHCCCHHHHHHHHHHHHHHHHCC---C---CCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99998-----60798679999999999985167---8---87366127789999998762677661467999887676