HHsearch alignment for GI: 254780627 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=94.09 E-value=0.32 Score=28.68 Aligned_cols=101 Identities=17% Similarity=0.357 Sum_probs=59.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH-------HHHHHCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 8986278888579999999999863068816864698889999-------999861988999999740310205444453
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRF-------ASAIRDNCALNLKDSLRNIDLLLIDDMQFL 271 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~-------~~a~~~~~~~~fr~~~r~~DvLliDDiqfl 271 (502)
T Consensus 2 ivl~GlP~SGKSt~a~~L~~~l~~~--~~~~i~~~~d~~~~~~~~~~~~~Ek~~r~~~~~~v~~~l~~~~~vI~D~~nYi 79 (249)
T TIGR03574 2 IILTGLPGVGKSTFSKELSKKLSEK--NIDNIILGTDLIRESFPVWKEKYEEFIRDSTLYLIKTALKNKYSVIVDDTNYY 79 (249)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHH--CCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 7896789998999999999999982--99659965520021200033677999899999999998433766997273278
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf 1750699999999998856987999648756761
Q gi|254780627|r 272 QGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSEL 305 (502)
Q Consensus 272 ~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l 305 (502)
T Consensus 80 Kg~--RYEL~clAk~~--~t~~c~I~~~~p~e~c 109 (249)
T TIGR03574 80 NSK--RRDLINIAKEY--NKNYIIIYLKAPLDTL 109 (249)
T ss_pred HHH--HHHHHHHHHHC--CCCEEEEEECCCHHHH
T ss_conf 899--99999999984--9986999973999999