>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.79 E-value=0.015 Score=38.23 Aligned_cols=99 Identities=22% Similarity=0.320 Sum_probs=63.4 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHH--------HHH--HHHHHHCC---CHHHHHHHHHHCCHHHH Q ss_conf 898627888857999999999986306881686469888--------999--99998619---88999999740310205 Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYF--------MWR--FASAIRDN---CALNLKDSLRNIDLLLI 265 (502) Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F--------~~~--~~~a~~~~---~~~~fr~~~r~~DvLli 265 (502) T Consensus 28 ~~i~G~nGaGKSTLl~~l~gl~~~~--~G~-i~~~g~~~~~~~~~~~~~~i~~v~QLSgGqkqrv~iA~al~~~p~ilil 104 (157) T cd00267 28 VALVGPNGSGKSTLLRAIAGLLKPT--SGE-ILIDGKDIAKLPLEELRRRIGYVPQLSGGQRQRVALARALLLNPDLLLL 104 (157) T ss_pred EEEECCCCCCHHHHHHHHHCCCCCC--CCE-EEECCEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE T ss_conf 9998788999899999995884799--628-9999999997999999940608766886999999999999709999999 Q ss_pred HHHHHHCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCH Q ss_conf 444453175--0699999999998856987999648756 Q gi|254780627|r 266 DDMQFLQGK--LIQHEFCHLLNSLLDSAKQVVAAADRPP 302 (502) Q Consensus 266 DDiqfl~gk--~tqee~f~~~n~l~~~gkqiv~tsd~~P 302 (502) T Consensus 105 DEP--tsgLD~~~~~~l~~~i~~l~~~g~tii~vtH~~~ 141 (157) T cd00267 105 DEP--TSGLDPASRERLLELLRELAEEGRTVIIVTHDPE 141 (157) T ss_pred ECC--CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH T ss_conf 698--7668999999999999999968999999908999

HHsearch alignment for GI: 254780627 and conserved domain: cd00267