HHsearch alignment for GI: 254780627 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=94.26  E-value=0.51  Score=27.24  Aligned_cols=41  Identities=29%  Similarity=0.400  Sum_probs=30.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
Q ss_conf             898627888857999999999986306881686469888999
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWR  240 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~  240 (502)
T Consensus        33 ~viaarpg~GKT~f~~~~a~~~~~~~-g~~vl~~SlEm~~~~   73 (271)
T cd01122          33 IILTAGTGVGKTTFLREYALDLITQH-GVRVGTISLEEPVVR   73 (271)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCCHHH
T ss_conf             99996899869999999999999976-990899970499999