HHsearch alignment for GI: 254780627 and conserved domain: cd03228

>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.48  E-value=0.02  Score=37.24  Aligned_cols=103  Identities=22%  Similarity=0.327  Sum_probs=62.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCC-----------------CCEEEEEHHHHHHHHHHHHHCC--------CHHH
Q ss_conf             48986278888579999999999863068-----------------8168646988899999998619--------8899
Q gi|254780627|r  198 PLFIHASVGLGKTHLLQAIANASIKRQPN-----------------LRVVYLTAEYFMWRFASAIRDN--------CALN  252 (502)
Q Consensus       198 PLfi~G~~GlGKTHLl~ai~~~~~~~~~~-----------------~~v~y~~~e~F~~~~~~a~~~~--------~~~~  252 (502)
T Consensus        30 ~i~ivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~l--f~~tv~eNiLSgGq~Qri~l  107 (171)
T cd03228          30 KVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAYVPQDPFL--FSGTIRENILSGGQRQRIAI  107 (171)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCC--CCCCHHHHCCCHHHHHHHHH
T ss_conf             9999999998399999999767758974899999998859989986318999666843--75779997744889999999


Q ss_pred             HHHHHHHCCHHHHHHHHHHCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHC
Q ss_conf             9999740310205444453175--06999999999988569879996487567613
Q gi|254780627|r  253 LKDSLRNIDLLLIDDMQFLQGK--LIQHEFCHLLNSLLDSAKQVVAAADRPPSELE  306 (502)
Q Consensus       253 fr~~~r~~DvLliDDiqfl~gk--~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~  306 (502)
T Consensus       108 ARal~~~p~illlDEp--ts~LD~~~~~~i~~~l~~~~-~~~Tvi~vtH~-~~~~~  159 (171)
T cd03228         108 ARALLRDPPILILDEA--TSALDPETEALILEALRALA-KGKTVIVIAHR-LSTIR  159 (171)
T ss_pred             HHHHHHCCCEEEEECC--CCCCCHHHHHHHHHHHHHHC-CCCEEEEEECC-HHHHH
T ss_conf             9999748998999577--66799899999999999980-99989999579-99997