HHsearch alignment for GI: 254780627 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=94.07 E-value=0.13 Score=31.38 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=22.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf 898627888857999999999986306881686469
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTA 234 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~ 234 (502)
T Consensus 33 v~ivG~sGsGKSTLl~ll~gl~~---p~~G~I~i~g 65 (220)
T cd03245 33 VAIIGRVGSGKSTLLKLLAGLYK---PTSGSVLLDG 65 (220)
T ss_pred EEEECCCCCHHHHHHHHHHCCCC---CCCCEEEECC
T ss_conf 99999999859999999967254---7865899999