HHsearch alignment for GI: 254780627 and conserved domain: pfam00493
>pfam00493 MCM MCM2/3/5 family.
Probab=97.10 E-value=0.0033 Score=42.79 Aligned_cols=127 Identities=23% Similarity=0.220 Sum_probs=63.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH-HHHHH-HCCCHHHHHHH-----HHHCCHHHHHHHHHH
Q ss_conf 898627888857999999999986306881686469888999-99998-61988999999-----740310205444453
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWR-FASAI-RDNCALNLKDS-----LRNIDLLLIDDMQFL 271 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~-~~~a~-~~~~~~~fr~~-----~r~~DvLliDDiqfl 271 (502)
T Consensus 60 iLLvGdPG~gKSqlLk~~~~----~~p--r~~~tsg~~ss~~GLTa~~~~d~~~~~~~leaGalvlAd~Gv~cIDEfdk~ 133 (327)
T pfam00493 60 VLLVGDPGTAKSQLLKYVAK----LAP--RAVYTSGKGSSAAGLTAAVVRDPDTGEWTLEAGALVLADGGVCCIDEFDKM 133 (327)
T ss_pred EEEECCCCCCHHHHHHHHHH----HCC--CCEEECCCCCCCCCCEEEEEEECCCCCEEEECCCEEECCCCEEEEECCCCC
T ss_conf 89846998156099999998----688--708831776656776158998068883698368477558982785005558
Q ss_pred CCCCHHHHHHHHHHHHHHC-------C-------CEEEEECCCCH----------HHHCCCCHHHHHHH-HCCEEEEECC
Q ss_conf 1750699999999998856-------9-------87999648756----------76136303457653-0211577515
Q gi|254780627|r 272 QGKLIQHEFCHLLNSLLDS-------A-------KQVVAAADRPP----------SELESLDPRIRSRL-QGGVSVPLGL 326 (502)
Q Consensus 272 ~gk~tqee~f~~~n~l~~~-------g-------kqiv~tsd~~P----------~~l~~l~~rL~SR~-~~Gl~~~i~~ 326 (502)
T Consensus 134 ~~-~d~saL~---EAMEqqtVsIaKaGi~~tL~ar~sVlAaaNP~~g~yd~~~~~~~ni~Lp~~lLsRFDLif~l--~D~ 207 (327)
T pfam00493 134 NE-EDRVAIH---EAMEQQTISIAKAGIVATLNARCSVLAAANPIFGRYDPKKSVAENINLPPPLLSRFDLIFVL--LDK 207 (327)
T ss_pred CH-HHHHHHH---HHHHHCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCEEEEEEE--ECC
T ss_conf 87-6799999---99986817763385389725871799852776773788889888558976774501079884--068
Q ss_pred CCHHHHHHHHH
Q ss_conf 88899999999
Q gi|254780627|r 327 HDYEMRFSILK 337 (502)
Q Consensus 327 Pd~e~r~~Il~ 337 (502)
T Consensus 208 ~~~~~D~~ia~ 218 (327)
T pfam00493 208 PDEEKDEELAK 218 (327)
T ss_pred CCHHHHHHHHH
T ss_conf 98688999999