HHsearch alignment for GI: 254780627 and conserved domain: pfam00493

>pfam00493 MCM MCM2/3/5 family.
Probab=97.10  E-value=0.0033  Score=42.79  Aligned_cols=127  Identities=23%  Similarity=0.220  Sum_probs=63.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH-HHHHH-HCCCHHHHHHH-----HHHCCHHHHHHHHHH
Q ss_conf             898627888857999999999986306881686469888999-99998-61988999999-----740310205444453
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWR-FASAI-RDNCALNLKDS-----LRNIDLLLIDDMQFL  271 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~-~~~a~-~~~~~~~fr~~-----~r~~DvLliDDiqfl  271 (502)
T Consensus        60 iLLvGdPG~gKSqlLk~~~~----~~p--r~~~tsg~~ss~~GLTa~~~~d~~~~~~~leaGalvlAd~Gv~cIDEfdk~  133 (327)
T pfam00493        60 VLLVGDPGTAKSQLLKYVAK----LAP--RAVYTSGKGSSAAGLTAAVVRDPDTGEWTLEAGALVLADGGVCCIDEFDKM  133 (327)
T ss_pred             EEEECCCCCCHHHHHHHHHH----HCC--CCEEECCCCCCCCCCEEEEEEECCCCCEEEECCCEEECCCCEEEEECCCCC
T ss_conf             89846998156099999998----688--708831776656776158998068883698368477558982785005558


Q ss_pred             CCCCHHHHHHHHHHHHHHC-------C-------CEEEEECCCCH----------HHHCCCCHHHHHHH-HCCEEEEECC
Q ss_conf             1750699999999998856-------9-------87999648756----------76136303457653-0211577515
Q gi|254780627|r  272 QGKLIQHEFCHLLNSLLDS-------A-------KQVVAAADRPP----------SELESLDPRIRSRL-QGGVSVPLGL  326 (502)
Q Consensus       272 ~gk~tqee~f~~~n~l~~~-------g-------kqiv~tsd~~P----------~~l~~l~~rL~SR~-~~Gl~~~i~~  326 (502)
T Consensus       134 ~~-~d~saL~---EAMEqqtVsIaKaGi~~tL~ar~sVlAaaNP~~g~yd~~~~~~~ni~Lp~~lLsRFDLif~l--~D~  207 (327)
T pfam00493       134 NE-EDRVAIH---EAMEQQTISIAKAGIVATLNARCSVLAAANPIFGRYDPKKSVAENINLPPPLLSRFDLIFVL--LDK  207 (327)
T ss_pred             CH-HHHHHHH---HHHHHCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCEEEEEEE--ECC
T ss_conf             87-6799999---99986817763385389725871799852776773788889888558976774501079884--068


Q ss_pred             CCHHHHHHHHH
Q ss_conf             88899999999
Q gi|254780627|r  327 HDYEMRFSILK  337 (502)
Q Consensus       327 Pd~e~r~~Il~  337 (502)
T Consensus       208 ~~~~~D~~ia~  218 (327)
T pfam00493       208 PDEEKDEELAK  218 (327)
T ss_pred             CCHHHHHHHHH
T ss_conf             98688999999