HHsearch alignment for GI: 254780627 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=97.27 E-value=0.00035 Score=49.71 Aligned_cols=58 Identities=24% Similarity=0.368 Sum_probs=44.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHH--CCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 8986278888579999999999863--06881686469888999999986198899999974031020544445
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKR--QPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQF 270 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~--~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqf 270 (502)
T Consensus 1 i~l~G~~G~GKS~~a~~la~~~~~~~~~~~~~~~Y~--------------~~~~~~~wdgY~gq~vvi~DD~~~ 60 (105)
T pfam00910 1 IWLYGPPGCGKSTLAKYLARALLDHLGLPKKDSVYS--------------RNPDDDFWDGYTGQPVVIIDDFGQ 60 (105)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE--------------CCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 989799989889999999999999837787897796--------------788776567889985799965777