HHsearch alignment for GI: 254780627 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=98.91 E-value=1.4e-08 Score=81.01 Aligned_cols=106 Identities=22% Similarity=0.343 Sum_probs=74.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH---C--CCHHHHHHHH-HHCCHHHHHHHHHHC
Q ss_conf 898627888857999999999986306881686469888999999986---1--9889999997-403102054444531
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIR---D--NCALNLKDSL-RNIDLLLIDDMQFLQ 272 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~---~--~~~~~fr~~~-r~~DvLliDDiqfl~ 272 (502)
T Consensus 64 lYl~G~VGrGKTmLMDlFy~~lp~~~-K~R~---HFh~FM~~vH~~l~~~~~~~dpl~~va~~l~~~~~lLCfDEFqV~- 138 (361)
T pfam03969 64 LYLWGGVGRGKTHLMDSFFESLPGER-KRRT---HFHRFMFRVHDELTTLQGGDDPLPIAADRFANEARLLCFDEFEVD- 138 (361)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCC-CCCC---CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEEC-
T ss_conf 89889988869999999998677534-4456---678999999999999766776389999999725877997635616-
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHH--CCCC
Q ss_conf 750699999999998856987999648756761--3630
Q gi|254780627|r 273 GKLIQHEFCHLLNSLLDSAKQVVAAADRPPSEL--ESLD 309 (502)
Q Consensus 273 gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l--~~l~ 309 (502)
T Consensus 139 DIaDAMIL~rLf~~Lf~~gvvlV~TSN~~P~~LY~~GLq 177 (361)
T pfam03969 139 DIGDAMILGRLFEALFARGVSLVATSNTAPEQLYRNGLN 177 (361)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCC
T ss_conf 788899999999999977978998089998998368741