HHsearch alignment for GI: 254780627 and conserved domain: smart00488
>smart00488 DEXDc2 DEAD-like helicases superfamily.
Probab=90.72 E-value=1.5 Score=24.04 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=24.8
Q ss_pred CEEEEECCCCCCHH-HHHHHHHHHHHHH---CCCCCEEEEEH
Q ss_conf 54898627888857-9999999999863---06881686469
Q gi|254780627|r 197 NPLFIHASVGLGKT-HLLQAIANASIKR---QPNLRVVYLTA 234 (502)
Q Consensus 197 NPLfi~G~~GlGKT-HLl~ai~~~~~~~---~~~~~v~y~~~ 234 (502)
T Consensus 28 ~~~llEaPTGtGKTlalL~~al~~~~~~~~~~~~~ki~~~t~ 69 (289)
T smart00488 28 KIGILESPTGTGKTLSLLCLTLTWLRSFPERIQKIKLIYLSR 69 (289)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHCHHCCCCCEEEEEEC
T ss_conf 979998999651899999999999996701024561687615