BLAST/PSIBLAST alignment of GI: 254780627 and GI: 116250144 at iteration 1

>gi|116250144|ref|YP_765982.1| chromosomal replication initiation protein [Rhizobium leguminosarum bv. viciae 3841] Length = 482
>gi|123384972|sp|Q1MMD6|DNAA_RHIL3 RecName: Full=Chromosomal replication initiator protein DnaA Length = 482
>gi|115254792|emb|CAK05866.1| putative chromosomal replication initiator protein [Rhizobium leguminosarum bv. viciae 3841] Length = 482

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/484 (64%), Positives = 366/484 (75%), Gaps = 26/484 (5%)

Query: 38  IFTIVSSRLKNQVGPDVYASWFQRLKFHSVLHNIVHLSVPTNFLKAWIKNRYLETITKLF 97
           +F  VS+RLK QVGPDVYASWF RLK HSV  ++V LSVPT FLK+WI NRYL+ IT LF
Sbjct: 6   LFERVSARLKAQVGPDVYASWFARLKLHSVSKSVVRLSVPTTFLKSWINNRYLDLITGLF 65

Query: 98  QEEHSRIQGVEILVRSVALPSV----EKTASSPSI-------TKLSPINTNISKS----- 141
           Q E   I  +E+LVR+          E  A  P+        T   P    + ++     
Sbjct: 66  QAEDPEILKIEVLVRTATRHGTKALDEVVAPEPAAPTQMRRPTSAQPAGQAVQQAVSAVA 125

Query: 142 ---PIILGKQTISPVFGSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNP 198
              P   G    SP+FGSPLDSRF F TF+EGSSNRVAL AA++IAE    G   VR NP
Sbjct: 126 AARPASFG----SPLFGSPLDSRFTFDTFVEGSSNRVALAAAKTIAEA---GQGAVRFNP 178

Query: 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLR 258
           LFIH++VGLGKTHLLQA+ANA+++   +LRVVYLTAEYFMWRFA+AIRDN AL LKDSLR
Sbjct: 179 LFIHSTVGLGKTHLLQAVANAAVQNPRSLRVVYLTAEYFMWRFATAIRDNDALTLKDSLR 238

Query: 259 NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQG 318
           NIDLL+IDDMQFLQGK+IQHEFCHLLN LLDSAKQVV AADR P ELESLDPR+RSRLQG
Sbjct: 239 NIDLLIIDDMQFLQGKMIQHEFCHLLNMLLDSAKQVVVAADRAPWELESLDPRVRSRLQG 298

Query: 319 GVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQL 378
           GV++     DYEMR  ILK RLA+++ EDP L I  E+L HVAR VT SGREL+GAFNQL
Sbjct: 299 GVAIEFDAPDYEMRLEILKRRLAVARLEDPSLEIPAELLQHVARNVTASGRELEGAFNQL 358

Query: 379 VFRHSFAPILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSNRRVRTV 438
           VFR SF P L+ E  DELL+HLV +GE +++RIEDIQR+VA+HYN+SR +L+SNRR R +
Sbjct: 359 VFRRSFEPNLSIERVDELLAHLVGSGEPRRVRIEDIQRIVARHYNVSRQELVSNRRTRVI 418

Query: 439 VRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETDITLKKEVELLKR 498
           V+PRQ+AMYLSK +TPRSFPEIGRRFG RDHTTVLHAVRK+E+++  D  L  EVELLKR
Sbjct: 419 VKPRQIAMYLSKTLTPRSFPEIGRRFGGRDHTTVLHAVRKIEELISGDTKLSHEVELLKR 478

Query: 499 LISE 502
           LI+E
Sbjct: 479 LINE 482