HHsearch alignment for GI: 254780628 and conserved domain: COG0731
>COG0731 Fe-S oxidoreductases [Energy production and conversion].
Probab=98.10 E-value=6.1e-05 Score=52.86 Aligned_cols=218 Identities=14% Similarity=0.225 Sum_probs=120.9
Q ss_pred CCCCEEEEEEC------CCCCCCCCCCCCEEEECCCCCCHHHH-HHHHHHHHHHHHHHHC--CCEEEEE-EECCCCCCCC
Q ss_conf 98854999940------65118376577302457886628899-9999999999987618--9505899-9628888878
Q gi|254780628|r 15 GSNSLGVYVHW------PFCVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTG--PRSISSI-FFGGGTPSLI 84 (395)
Q Consensus 15 ~~~~l~lYihi------PFC~~~C~yC~f~~~~~~~~~~~~~y-~~~l~~Ei~~~~~~~~--~~~~~~i-y~GGGTPs~l 84 (395)
T Consensus 15 ksrryG~slgi~~tP~~~~Cs~~CvyC~~G~~~~~~~~~~efi~~~~I~~~~~~~~~~~g~ea~~pd~vtis~~GEPTLy 94 (296)
T COG0731 15 KSRRYGISLGIQMTPSKKWCSYNCVYCWRGRTKKGTPERPEFIVEESILEELKLLLGYKGDEATEPDHVTISLSGEPTLY 94 (296)
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 50111522477666606543577758966677777777872415899999999984225665678877999379883346
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCH---HHHHHH
Q ss_conf 99999999976640476444332113321041002347766303454114323433201345542244313---478999
Q gi|254780628|r 85 EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS---EAIAAI 161 (395)
Q Consensus 85 ~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~---~~~~~~ 161 (395)
T Consensus 95 --~~L~elI~~~k~~g~~-~tflvT---N-gsl-pdv~~~L~--~~dql~~sLdA~~~~~~~~InRP~~~~~~e~ile~L 164 (296)
T COG0731 95 --PNLGELIEEIKKRGKK-TTFLVT---N-GSL-PDVLEELK--LPDQLYVSLDAPDEKTFRRINRPHKKDSWEKILEGL 164 (296)
T ss_pred --CCHHHHHHHHHHCCCC-EEEEEE---C-CCH-HHHHHHHC--CCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf --4889999999860795-089993---8-976-99998740--588799981468888999834888745299999999
Q ss_pred HHHHCC--CCCC-CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 986302--4443-3321000258543221112788753180012346468825960001454498021103567889998
Q gi|254780628|r 162 HLARNI--FPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238 (395)
Q Consensus 162 ~~~~~~--~~~v-~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~ 238 (395)
T Consensus 165 ~~~~~~~~~~~vir~tlvkg~N-~~~e~~~~~a~ll~~~~Pd~velk~~~rpga---s~~~-l~~~~~p~---~e~~~~f 236 (296)
T COG0731 165 EIFRSEYKGRTVIRTTLVKGIN-DDEEELEEYAELLERINPDFVELKTYMRPGA---SRYR-LPRSNMPL---HEEVLEF 236 (296)
T ss_pred HHHHHCCCCCEEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCEEEEECCCCCCH---HHHC-CCCCCCCH---HHHHHHH
T ss_conf 9740127874899999852646-8708899999999853997699834756876---7605-67001644---5999999
Q ss_pred HHHHHHHCCCCC
Q ss_conf 655788709624
Q gi|254780628|r 239 TQSITSAHGLHA 250 (395)
Q Consensus 239 a~e~L~~~GY~~ 250 (395)
T Consensus 237 ~~~l~~~~~~~~ 248 (296)
T COG0731 237 AKELGEELGYEI 248 (296)
T ss_pred HHHHHCCCCEEE
T ss_conf 998632357455