HHsearch alignment for GI: 254780628 and conserved domain: COG1242
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only].
Probab=99.90 E-value=3.2e-22 Score=167.36 Aligned_cols=223 Identities=18% Similarity=0.227 Sum_probs=177.0
Q ss_pred CCCCEEEEEECCC-CCCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
Q ss_conf 9885499994065-1183--------765773024578866288999999999999987618950589996288888789
Q gi|254780628|r 15 GSNSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85 (395)
Q Consensus 15 ~~~~l~lYihiPF-C~~~--------C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~ 85 (395)
T Consensus 20 g~Kv~Kv~ld~GF~CPNRDGti~rGGCtFC~~~g~~d~~~~~~~~i~~Q~~~q~~~~~kK~~~~k-yiaYFQ~~TNTyAp 98 (312)
T COG1242 20 GEKVFKVTLDGGFSCPNRDGTIGRGGCTFCSVAGSGDFAGQPKISIAEQFKEQAERMHKKWKRGK-YIAYFQAYTNTYAP 98 (312)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC
T ss_conf 87169985357778999999626786465067788763458667789999999999987515786-79998146666675
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC----CEEEECCCCCCHHHHHHHCCCCCHHHHHHH
Q ss_conf 9999999976640476444332113321041002347766303454----114323433201345542244313478999
Q gi|254780628|r 86 PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN----RISLGVQSLEEQSLRFLGRNHNASEAIAAI 161 (395)
Q Consensus 86 ~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~----RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~ 161 (395)
T Consensus 99 vevLre~ye~aL~~~~---VVGLsIgTRPDClpd~VldlL~e~-~~r~~vWvELGLQT~h~~Tlk~iNRgHd~~~y~dav 174 (312)
T COG1242 99 VEVLREMYEQALSEAG---VVGLSIGTRPDCLPDDVLDLLAEY-NKRYEVWVELGLQTAHDKTLKRINRGHDFACYVDAV 174 (312)
T ss_pred HHHHHHHHHHHHCCCC---EEEEEECCCCCCCCHHHHHHHHHH-HHHEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 9999999999727588---047750589988818999999998-644578877453055589999876245449999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 98630244433321000258543221112788753180012346468825960001454498021103567889998655
Q gi|254780628|r 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241 (395)
Q Consensus 162 ~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e 241 (395)
T Consensus 175 ~r~rkrgIkvc~HiI~GLPgE~~~~mleTak~v~~~~v~GIKlH~LhvvkgT~m~k~Y~~G~l~~ls~eeYv---~~~~d 251 (312)
T COG1242 175 KRLRKRGIKVCTHLINGLPGETRDEMLETAKIVAELGVDGIKLHPLHVVKGTPMEKMYEKGRLKFLSLEEYV---ELVCD 251 (312)
T ss_pred HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCEECCHHHHH---HHHHH
T ss_conf 999974974988884079888889999999999866875388887888638759999971886554599999---99999
Q ss_pred HHHH
Q ss_conf 7887
Q gi|254780628|r 242 ITSA 245 (395)
Q Consensus 242 ~L~~ 245 (395)
T Consensus 252 ~le~ 255 (312)
T COG1242 252 QLEH 255 (312)
T ss_pred HHHH
T ss_conf 9974