HHsearch alignment for GI: 254780628 and conserved domain: PRK05301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=98.94 E-value=4.1e-08 Score=73.86 Aligned_cols=176 Identities=15% Similarity=0.291 Sum_probs=117.6
Q ss_pred CCEEEEEECCC-CCCCCCCCCCEEEEC--CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 85499994065-118376577302457--886628899999999999998761895058999628888878999999999
Q gi|254780628|r 17 NSLGVYVHWPF-CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93 (395)
Q Consensus 17 ~~l~lYihiPF-C~~~C~yC~f~~~~~--~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll 93 (395)
T Consensus 15 aP~~v~~elT~~CNL~C~hCy~~~~~~~~~~ELs~~e-~~~~id~l~~---~-G---v~~v~~tGGEPllr-~-D~~ei~ 84 (375)
T PRK05301 15 PPLWLLAELTYRCPLQCPYCSNPLDLARHGAELSTAE-WIRVLREARA---L-G---VLQLHFSGGEPLLR-K-DLEELV 84 (375)
T ss_pred CCEEEEEHHHCHHCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHH---C-C---CCEEEECCCCCCCC-C-CHHHHH
T ss_conf 9728435731400787846698500487657899999-9999999998---6-9---98899618652456-6-899999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH-HCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 7664047644433211332104100234776630345411432343320134554-224431347899998630244433
Q gi|254780628|r 94 DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL-GRNHNASEAIAAIHLARNIFPRMS 172 (395)
Q Consensus 94 ~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~-~R~~~~~~~~~~~~~~~~~~~~v~ 172 (395)
T Consensus 85 ~~a~~~-G~----~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~ 159 (375)
T PRK05301 85 AHARRL-GL----YTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLT 159 (375)
T ss_pred HHHHHC-CC----EEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 999976-97----5899606745579999999850998899956779877877763788629999999999997498169
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE
Q ss_conf 3210002585432211127887531800123464688
Q gi|254780628|r 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209 (395)
Q Consensus 173 iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i 209 (395)
T Consensus 160 i~--~ti~r~N~~~l~~i~~la~~lGv~~~~l~~~~~ 194 (375)
T PRK05301 160 LN--AVIHRHNIDQIPRIIELAVELGADRLELANTQY 194 (375)
T ss_pred EE--EEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 99--872305688899999999972998289876567