HHsearch alignment for GI: 254780628 and conserved domain: PRK05301

>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=98.94  E-value=4.1e-08  Score=73.86  Aligned_cols=176  Identities=15%  Similarity=0.291  Sum_probs=117.6

Q ss_pred             CCEEEEEECCC-CCCCCCCCCCEEEEC--CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             85499994065-118376577302457--886628899999999999998761895058999628888878999999999
Q gi|254780628|r   17 NSLGVYVHWPF-CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL   93 (395)
Q Consensus        17 ~~l~lYihiPF-C~~~C~yC~f~~~~~--~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll   93 (395)
T Consensus        15 aP~~v~~elT~~CNL~C~hCy~~~~~~~~~~ELs~~e-~~~~id~l~~---~-G---v~~v~~tGGEPllr-~-D~~ei~   84 (375)
T PRK05301         15 PPLWLLAELTYRCPLQCPYCSNPLDLARHGAELSTAE-WIRVLREARA---L-G---VLQLHFSGGEPLLR-K-DLEELV   84 (375)
T ss_pred             CCEEEEEHHHCHHCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHH---C-C---CCEEEECCCCCCCC-C-CHHHHH
T ss_conf             9728435731400787846698500487657899999-9999999998---6-9---98899618652456-6-899999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH-HCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             7664047644433211332104100234776630345411432343320134554-224431347899998630244433
Q gi|254780628|r   94 DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL-GRNHNASEAIAAIHLARNIFPRMS  172 (395)
Q Consensus        94 ~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~-~R~~~~~~~~~~~~~~~~~~~~v~  172 (395)
T Consensus        85 ~~a~~~-G~----~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~  159 (375)
T PRK05301         85 AHARRL-GL----YTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLT  159 (375)
T ss_pred             HHHHHC-CC----EEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             999976-97----5899606745579999999850998899956779877877763788629999999999997498169


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE
Q ss_conf             3210002585432211127887531800123464688
Q gi|254780628|r  173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI  209 (395)
Q Consensus       173 iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i  209 (395)
T Consensus       160 i~--~ti~r~N~~~l~~i~~la~~lGv~~~~l~~~~~  194 (375)
T PRK05301        160 LN--AVIHRHNIDQIPRIIELAVELGADRLELANTQY  194 (375)
T ss_pred             EE--EEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             99--872305688899999999972998289876567