HHsearch alignment for GI: 254780628 and conserved domain: PRK05660
>PRK05660 coproporphyrinogen III oxidase; Provisional.
Probab=100.00 E-value=0 Score=730.87 Aligned_cols=369 Identities=35% Similarity=0.609 Sum_probs=340.4
Q ss_pred CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 88549999406511837657730245788662889999999999999876189505899962888887899999999976
Q gi|254780628|r 16 SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDG 95 (395)
Q Consensus 16 ~~~l~lYihiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~ 95 (395)
T Consensus 4 ~~PlsLYiHiPFC~~~C~YC~f~~~~~~~~~~~~~Y~~aL~~ei~~~~~~~~~~~i~tiy~GGGTPs~L~~~~l~~l~~~ 83 (378)
T PRK05660 4 LPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPEDEYVDHLLADLDADLPLVQGREVHSIFIGGGTPSLFSAEAIQRLLDG 83 (378)
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCHHHHHHHHHH
T ss_conf 98628999727898769999696504888776999999999999998776179757699978953330899999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC-CCCCCCC
Q ss_conf 640476444332113321041002347766303454114323433201345542244313478999986302-4443332
Q gi|254780628|r 96 IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174 (395)
Q Consensus 96 i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~-~~~v~iD 174 (395)
T Consensus 84 i~~~f~~~~~~EiTiE~nP~~~~~~~l~~l~~~GvnRiSiGVQsf~~~~l~~lgR~h~~~~~~~ai~~~r~~gf~~iniD 163 (378)
T PRK05660 84 VRARLPFAPDAEITMEANPGTVEADRFVGYQRAGVNRISIGVQSFSEEKLKRLGRIHGPDEAKRAAKLAQGAGLRSFNLD 163 (378)
T ss_pred HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 99857987771489845705330889999998098759996143789999982799999999999999997699606542
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 10002585432211127887531800123464688259600014544980211035678899986557887096242367
Q gi|254780628|r 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254 (395)
Q Consensus 175 li~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yeis 254 (395)
T Consensus 164 LiyGlP~Qt~~~~~~~l~~~~~l~p~his~Y~L~~e~~T~~~~~~----~~lp~~~~~~~my~~~~~~L~~~Gy~~yeis 239 (378)
T PRK05660 164 LMHGLPDQSLEEALDDLRQAIALNPPHLSWYQLTIEPNTVFGSRP----PVLPDDDALWDIFEQGHQLLTAAGYQQYETS 239 (378)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCC----CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 326899988999999999986449880578888865897376467----6699858999999999999997799878612
Q ss_pred CHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCC-CEEEEEEECCCHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHH
Q ss_conf 434310110133211244412320432001157886-1578654247025778775389633322454999989999999
Q gi|254780628|r 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333 (395)
Q Consensus 255 ~fak~~~~s~hn~~Yw~~~d~iG~G~GA~S~l~~~~-~~~~~~~~~~~~~Y~~~i~~~~~p~~~~~~Ls~~e~~~e~l~~ 333 (395)
T Consensus 240 nFAk~g~~~~HN~~YW~~~dylGiG~gA~g~~s~~~g~~~r~~~~~~~~~yl~~-----~~~~~~~~l~~~~~~~e~~m~ 314 (378)
T PRK05660 240 AYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFPDGRILRTWKTKHPRGYLQG-----RYLEGQRDVPAADLPFEFFMN 314 (378)
T ss_pred CCCCCCHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCEEEEECCCCHHHHHHC-----CCCCCCCCCCHHHHHHHHHHH
T ss_conf 777887022201110579980898158141001578616874123689999705-----543565358886899999999
Q ss_pred HHHHCCCCCHHHHHHHHCCCHHH--HHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHHHC
Q ss_conf 65623799888999883899649--99999998799498559899995675898999999861
Q gi|254780628|r 334 GLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394 (395)
Q Consensus 334 ~LR~~~Gid~~~~~~~fg~~~~~--~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~l~ 394 (395)
T Consensus 315 ~LRl~~Gv~~~~f~~~~g~~~~~~~~~l~~l~~~Gll~-~~~~~l~lT~~G~l~~n~I~~~Fl 376 (378)
T PRK05660 315 RFRLLEAAPRAEFEAYTGLPESVIRPQLDEAIAQGYLT-ETEDYWQITEHGKLFLNDLLELFL 376 (378)
T ss_pred HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE-EECCEEEECHHHHHHHHHHHHHHH
T ss_conf 89987798999999997979999999999999799889-839999999778999999999983