HHsearch alignment for GI: 254780628 and conserved domain: PRK08445

Probab=99.07  E-value=3.9e-09  Score=80.62  Aligned_cols=220  Identities=13%  Similarity=0.214  Sum_probs=140.0

Q ss_pred             CEEEEEECCC---CCCCCCCCCCEEEECCCCCCHHHHH---HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
Q ss_conf             5499994065---1183765773024578866288999---999999999987618950589996288888789999999
Q gi|254780628|r   18 SLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL   91 (395)
Q Consensus        18 ~l~lYihiPF---C~~~C~yC~f~~~~~~~~~~~~~y~---~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~   91 (395)
T Consensus        39 tfv~nrniN~TNiC~~~C~FCaF~r~~~~~----~aY~ls~eei~~~~~~a~----~~g~tEv~i~GG~~P~l~~~yY~~  110 (348)
T PRK08445         39 TFIVDRNINYTNICWVDCKFCAFYRHLKEE----DAYILSFEEIDQKIEELL----AIGGTQILFQGGVHPKLKIEWYEN  110 (348)
T ss_pred             EEEECCCCCHHHHHHCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHH----HCCCEEEEEECCCCCCCCHHHHHH
T ss_conf             997016875526865489777574799998----762279999999999998----649818998279899997779999


Q ss_pred             HHHHHHHCCCCCCC-----CCCCCCCCCCCC-HHHHHHHHHHCCCCCE-EEECCCCCCHHHHHHHC-CCCCHHHHHHHHH
Q ss_conf             99766404764443-----321133210410-0234776630345411-43234332013455422-4431347899998
Q gi|254780628|r   92 ILDGIAKNWTVSSN-----VEITIEANPSSV-EVNNFQGYRKAGVNRI-SLGVQSLEEQSLRFLGR-NHNASEAIAAIHL  163 (395)
Q Consensus        92 ll~~i~~~~~~~~~-----~e~t~E~~P~~~-~~~~l~~l~~~Gv~Ri-S~GvQs~~~~~l~~~~R-~~~~~~~~~~~~~  163 (395)
T Consensus       111 l~r~ik~~~P~i~ihaft~~EI~~~a~~~~~s~~EvL~~Lk~AGL~slPGggAEIl~d~VR~~I~p~K~s~~~Wlei~~~  190 (348)
T PRK08445        111 LVSHIAQKYPTITIHGFSAVEIDYIAKISKISLKEVLERLQAKGLSSIPGAGAEILSDRVRDIIAPKKLSSDRWLEVHRQ  190 (348)
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99999975775424279999999999981989999999999819887888662634889998748888999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC--CCEE-EEEEEEE-CCCEEHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             630244433321000258543221112788753180--0123-4646882-59600014544980211035678899986
Q gi|254780628|r  164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DHLS-LYQLTIE-KGTLFYKMHKDGDLVLPSENVAVDLYNLT  239 (395)
Q Consensus       164 ~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p--~~is-~Y~l~i~-~~t~l~~~~~~~~~~~p~~~~~~~~~~~a  239 (395)
T Consensus       191 AH~lGi~ttaTMlyGh-iEt~e~rv~HL~~lR~lQdeTgGF~~FIpl~F~p~nt~l~~~~~~~--~~~~~~e~Lk~~Avs  267 (348)
T PRK08445        191 AHKIGMKSTATMMFGT-VENDEEIIEHWEHIRDLQDETGGFRAFILWSFQPDNTPLKEEHPEI--KKQSSNRYLRLLAVS  267 (348)
T ss_pred             HHHCCCCCCCEEECCC-CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCC--CCCCHHHHHHHHHHH
T ss_conf             9986996412136267-7999999999999999998619978998543106997020037877--899879999999999


Q ss_pred             HHHHHHCCCCC
Q ss_conf             55788709624
Q gi|254780628|r  240 QSITSAHGLHA  250 (395)
Q Consensus       240 ~e~L~~~GY~~  250 (395)
T Consensus       268 RL~L-d-ni~~  276 (348)
T PRK08445        268 RLFL-D-NFKN  276 (348)
T ss_pred             HHHH-C-CCCC
T ss_conf             9986-4-8876