HHsearch alignment for GI: 254780628 and conserved domain: TIGR01210
>TIGR01210 TIGR01210 conserved hypothetical protein TIGR01210; InterPro: IPR005909 This family of exclusively archaeal proteins has no characterised close homologs. An apparent similarity between the central region of this family and the central regions of the oxygen-independent coproporphyrinogen III dehydrogenase HemN has been observed..
Probab=97.72 E-value=0.00076 Score=45.60 Aligned_cols=211 Identities=20% Similarity=0.322 Sum_probs=136.5
Q ss_pred CCCCEEEEEECCCCCC-C----CCCCCCEEEECCC-CCCHHHHHHHHHHHHHHHHHHHCC--CEEEEEEECCCC--CCCC
Q ss_conf 9885499994065118-3----7657730245788-662889999999999999876189--505899962888--8878
Q gi|254780628|r 15 GSNSLGVYVHWPFCVK-K----CPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFGGGT--PSLI 84 (395)
Q Consensus 15 ~~~~l~lYihiPFC~~-~----C~yC~f~~~~~~~-~~~~~~y~~~l~~Ei~~~~~~~~~--~~~~~iy~GGGT--Ps~l 84 (395)
T Consensus 13 ~~~~~~~~~~~~gc~~~~~~~~c~~c~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~ 92 (329)
T TIGR01210 13 PGKSLTVILRTRGCYWYRIGGGCYLCGYLADAPPGGKVTEENLLGQFDYALEKLKGEGGDLKDFVLKIFTSGSFLDDREV 92 (329)
T ss_pred CCCEEEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHC
T ss_conf 21014677614552001103540000122113454421488999999999876420133344422002204442350103
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC--C-CCEEEECCCCCCHHH-HHHHCCCCCHHHHHH
Q ss_conf 999999999766404764443321133210410023477663034--5-411432343320134-554224431347899
Q gi|254780628|r 85 EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--V-NRISLGVQSLEEQSL-RFLGRNHNASEAIAA 160 (395)
Q Consensus 85 ~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~G--v-~RiS~GvQs~~~~~l-~~~~R~~~~~~~~~~ 160 (395)
T Consensus 93 p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~ 169 (329)
T TIGR01210 93 PPGTRGYLFEKLAER---DNLKKLVVESRPEFIDEEKLEELRKVGEGLPLEVGVGLETANDRVRELCINKGFTFEDFVDA 169 (329)
T ss_pred CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 247889999987654---34677765300111033456678775246420001021000246777654214516789999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHCC-CCCEEEEEEEEECCCEEHHHHHCCCCCCCH
Q ss_conf 998630244433321000258543----22111278875318-001234646882596000145449802110
Q gi|254780628|r 161 IHLARNIFPRMSFDLIYALPKQTM----TQWEMELQRALSYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228 (395)
Q Consensus 161 ~~~~~~~~~~v~iDli~GlPgqt~----e~~~~~l~~~~~l~-p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~ 228 (395)
T Consensus 170 ~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~gc~~~~~~~~~~~~~~~~~~~~~~~~~~pp~ 242 (329)
T TIGR01210 170 AELARNYGAGVKAYLLLKPPFLSEKEAIADALSSIRKCKPYTGCDTVSLNPTNVQKGTLVEKLWKRGLYRPPW 242 (329)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 9988752763012111124100204678899988886532035421220200010346788887526778605