HHsearch alignment for GI: 254780628 and conserved domain: TIGR01212
>TIGR01212 TIGR01212 radical SAM protein, TIGR01212 family; InterPro: IPR005911 This uncharacterised protein family shows significant similarity to IPR005910 from INTERPRO, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain..
Probab=99.94 E-value=1.5e-25 Score=189.33 Aligned_cols=222 Identities=16% Similarity=0.226 Sum_probs=174.4
Q ss_pred CCEEEEEECCC-CCCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC--EEEEEEECCCCCCCCC
Q ss_conf 85499994065-1183--------76577302457886628899999999999998761895--0589996288888789
Q gi|254780628|r 17 NSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPSLIE 85 (395)
Q Consensus 17 ~~l~lYihiPF-C~~~--------C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~--~~~~iy~GGGTPs~l~ 85 (395)
T Consensus 16 kV~Ki~~~gGF~CPNRDGT~G~GGCtfC~~a~~~~f~~~~~~~-~~~~~~~i~~~~~~~~k~G~kkf~aYFQ~yTnTYAp 94 (307)
T TIGR01212 16 KVFKITLHGGFSCPNRDGTIGRGGCTFCNDASKPSFADEVTQA-RIPIKEQIKKRKKKYKKDGIKKFIAYFQAYTNTYAP 94 (307)
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
T ss_conf 4499986457887788870025772521788888524510235-446899999999765315731578997388765002
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCC-CEEEECCCCCCHHHHHHHCCCCCHHHHHHH
Q ss_conf 999999997664047644433211332104100234776630---3454-114323433201345542244313478999
Q gi|254780628|r 86 PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK---AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAI 161 (395)
Q Consensus 86 ~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~---~Gv~-RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~ 161 (395)
T Consensus 95 ve~Lk~~y~~aL~~---~~vVGlsvgTRPDC~P~~VLDlL~ey~~~GyevWvELGLQtah~~TL~~INRgHd~~~y~~a~ 171 (307)
T TIGR01212 95 VEVLKEMYEQALSE---DDVVGLSVGTRPDCVPDEVLDLLAEYKERGYEVWVELGLQTAHDRTLKKINRGHDFACYVDAV 171 (307)
T ss_pred HHHHHHHHHHHHHH---CCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 68888999987632---780577536889877478999999995497589996053565589999851437878999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 98630244433321000258543221112788753180012346468825960001454498021103567889998655
Q gi|254780628|r 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241 (395)
Q Consensus 162 ~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e 241 (395)
T Consensus 172 ~~~~krGikVC~H~I~GLPgE~~~~~~eTak~~~~l~vdGiKiH~LhvvkGt~m~k~Y~~G~~~~l~~e~Y~---~~~~d 248 (307)
T TIGR01212 172 KRARKRGIKVCSHVILGLPGEDREEMLETAKIVASLDVDGIKIHPLHVVKGTKMAKQYEKGELKTLSLEEYI---SLACD 248 (307)
T ss_pred HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHCCCEEECCHHHHH---HHHHH
T ss_conf 999765988999987428988888999999999837988488720178735757887545740104767799---99999
Q ss_pred HHHH
Q ss_conf 7887
Q gi|254780628|r 242 ITSA 245 (395)
Q Consensus 242 ~L~~ 245 (395)
T Consensus 249 ~le~ 252 (307)
T TIGR01212 249 FLEH 252 (307)
T ss_pred HHHC
T ss_conf 9850