HHsearch alignment for GI: 254780628 and conserved domain: TIGR01212

>TIGR01212 TIGR01212 radical SAM protein, TIGR01212 family; InterPro: IPR005911 This uncharacterised protein family shows significant similarity to IPR005910 from INTERPRO, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain..
Probab=99.94  E-value=1.5e-25  Score=189.33  Aligned_cols=222  Identities=16%  Similarity=0.226  Sum_probs=174.4

Q ss_pred             CCEEEEEECCC-CCCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC--EEEEEEECCCCCCCCC
Q ss_conf             85499994065-1183--------76577302457886628899999999999998761895--0589996288888789
Q gi|254780628|r   17 NSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPSLIE   85 (395)
Q Consensus        17 ~~l~lYihiPF-C~~~--------C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~--~~~~iy~GGGTPs~l~   85 (395)
T Consensus        16 kV~Ki~~~gGF~CPNRDGT~G~GGCtfC~~a~~~~f~~~~~~~-~~~~~~~i~~~~~~~~k~G~kkf~aYFQ~yTnTYAp   94 (307)
T TIGR01212        16 KVFKITLHGGFSCPNRDGTIGRGGCTFCNDASKPSFADEVTQA-RIPIKEQIKKRKKKYKKDGIKKFIAYFQAYTNTYAP   94 (307)
T ss_pred             CEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH
T ss_conf             4499986457887788870025772521788888524510235-446899999999765315731578997388765002


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCC-CEEEECCCCCCHHHHHHHCCCCCHHHHHHH
Q ss_conf             999999997664047644433211332104100234776630---3454-114323433201345542244313478999
Q gi|254780628|r   86 PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK---AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAI  161 (395)
Q Consensus        86 ~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~---~Gv~-RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~  161 (395)
T Consensus        95 ve~Lk~~y~~aL~~---~~vVGlsvgTRPDC~P~~VLDlL~ey~~~GyevWvELGLQtah~~TL~~INRgHd~~~y~~a~  171 (307)
T TIGR01212        95 VEVLKEMYEQALSE---DDVVGLSVGTRPDCVPDEVLDLLAEYKERGYEVWVELGLQTAHDRTLKKINRGHDFACYVDAV  171 (307)
T ss_pred             HHHHHHHHHHHHHH---CCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             68888999987632---780577536889877478999999995497589996053565589999851437878999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             98630244433321000258543221112788753180012346468825960001454498021103567889998655
Q gi|254780628|r  162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS  241 (395)
Q Consensus       162 ~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e  241 (395)
T Consensus       172 ~~~~krGikVC~H~I~GLPgE~~~~~~eTak~~~~l~vdGiKiH~LhvvkGt~m~k~Y~~G~~~~l~~e~Y~---~~~~d  248 (307)
T TIGR01212       172 KRARKRGIKVCSHVILGLPGEDREEMLETAKIVASLDVDGIKIHPLHVVKGTKMAKQYEKGELKTLSLEEYI---SLACD  248 (307)
T ss_pred             HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHCCCEEECCHHHHH---HHHHH
T ss_conf             999765988999987428988888999999999837988488720178735757887545740104767799---99999


Q ss_pred             HHHH
Q ss_conf             7887
Q gi|254780628|r  242 ITSA  245 (395)
Q Consensus       242 ~L~~  245 (395)
T Consensus       249 ~le~  252 (307)
T TIGR01212       249 FLEH  252 (307)
T ss_pred             HHHC
T ss_conf             9850